ID:

dsi_14447

 Coordinate:

2r:19065677-19065955 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.1 -29.0 -28.7

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dsi_14447  2r:19065747-19065774 -
  2. dsi_14612  2r:19066207-19066234 -
  3. dsi_14612  2r:19066321-19066348 -
  4. 2r:19066537-19066564 -
  5. dsi_14739  2r:19066651-19066678 -
  6. node_37160:4-31 -
  7. node_50182:19-46 +
  8. node_50183:32-59 -
  9. node_50183:146-173 -
star
  1. dsi_14447  2r:19065685-19065709 -
  2. dsi_14612  2r:19066145-19066169 -
  3. dsi_14612  2r:19066259-19066283 -
  4. dsi_14612  2r:19066388-19066412 -
  5. dsi_14739  2r:19066589-19066613 -
  6. 2r:19066748-19066772 -
  7. 2r:19066808-19066832 -
  8. node_37160:71-95 -
  9. node_37160:131-155 -
  10. node_50182:84-108 +
  11. node_50183:84-108 -

Sense Strand Reads

GGCTCCTTCCATTGTATTGGAGGTAACAATAGGAGCCTTCAACGAGGAATTACGCCATAATGATAAACTATACGAACTAGTAGTCAACGTCGACACTCCATATAGATTCGGTTCGTCGAGGTATCACGATTAATTCAAAAGACTAGCCAAACATCCGCCTATATTATTTACTGCGTATCTGAATCCGTTGCAAGCACTAGGTTGCTCCTGGGTAGGTTGGTCTTGGTTGGGTGGCTGTTTCTCGTCCAAATCGGCGAGAAAGTTTTGGGCCACCTCGTTCACTCGCGGCAGGTGGGTAGGTTGCTCCTTGGTAGGTTGCTCCTTGGTAGGTTCCTCATGGGTAGGTTGGTCTTGGTTGGGTAACTGTTTCTCGTCCAAA
***************************************************************************************************************************************************************************************************************************************......(((((((((......)))))))))........(((((((((......)))..))))))((((.(((((....))))).))))..********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M053
female body
 SRR902008
ovaries
..................................GTCTTCAACGAGGAATT........................................................................................................................................................................................................................................................................................................................................ 17 1 1 7.00 7 0 3 4 0 0 0 0 0 0 0
..................................GTCTTCAACGAGGAA.......................................................................................................................................................................................................................................................................................................................................... 15 1 8 2.88 23 0 9 6 2 0 0 6 0 0 0
....................................CTTCAACGAGGAATTCC...................................................................................................................................................................................................................................................................................................................................... 17 1 2 2.50 5 0 3 0 1 0 0 1 0 0 0
....................................CTTCAACGAGGAATTCCG..................................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................TCTTCAACGAGGAATT........................................................................................................................................................................................................................................................................................................................................ 16 1 3 1.00 3 1 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGCTCCTTGGTAGGTTC.............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCGGTCTTGGTTGGGCAAC............... 20 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............TATTGGAGCTAAAAACAGGAGC....................................................................................................................................................................................................................................................................................................................................................... 22 3 3 1.00 3 0 0 0 0 0 3 0 0 0 0
..................................GTCTTCAACGAGGAAT......................................................................................................................................................................................................................................................................................................................................... 16 1 2 1.00 2 0 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................TTGGTTGGGTATCTGTTTCTCGTCC... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................TCTTCAACGAGGAAT......................................................................................................................................................................................................................................................................................................................................... 15 1 8 0.88 7 0 3 3 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAGA........................................................................................................................ 28 0 9 0.78 7 2 0 0 5 0 0 0 0 0 0
..............................AGGAGCCTTCTCCGAGGA........................................................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTAGGGCTTGGTTGGGTAAC............... 20 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0
....................................CTTCAACGAGGAATTC....................................................................................................................................................................................................................................................................................................................................... 16 1 4 0.50 2 0 1 1 0 0 0 0 0 0 0
..................................................................................................................................TATTTTAAAAGACTATCCAAACA.................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................TTGGTTGGGTAACTGATC.......... 18 2 8 0.38 3 0 0 0 0 0 0 0 3 0 0
..................................GTCTTCAACGAGGAATTC....................................................................................................................................................................................................................................................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTC..................................................................................................................................... 24 0 9 0.33 3 2 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGTG.................................................................................................................................................. 25 0 6 0.33 2 0 0 0 1 0 0 0 0 0 1
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTTGGGTG.................................................................................................................................................. 21 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGT.................. 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGT................................................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGTTGGTCTTGGTTGGGTGG................................................................................................................................................. 20 0 7 0.29 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCGGGCTTGGTTGGGTAAC............... 20 2 12 0.25 3 0 0 0 0 3 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGC............................................................................................................................ 24 0 9 0.22 2 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGGTTGGTCT............................................................................................................................................................ 26 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTTGGGTGGCTG.............................................................................................................................................. 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGGTTGCTC.......................................................... 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTAGGGGTTGGTTGGGTAAC............... 20 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TGCTCCTTGGTAGGTTGGTCTTGGTT....................................................................................................................................................... 26 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GGTAGGTTGGTCTTGGTTGGG.................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
....................................CTTCAACGAGGAATTTCT..................................................................................................................................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................TGCTCCTGGGTAGGTTGGTCTTGGTT....................................................................................................................................................... 26 0 7 0.14 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGG.................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TTCTTGGTAGGTTGCTCCTTGGTAGGT................................................ 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................TGGTAGGTTGCTCCTTGGTAGGTT............................................... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGTAGGTTGGTCTTGGTTGGG................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGG..................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGG......................................................................................................................................................... 18 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TAGGTTGGTCTTGGTT...................... 16 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGGTCTTGGTTGGGTGGCTGTTTCT......................................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TTGGTCTTGGTTGGGTG.................................................................................................................................................. 17 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGG........................ 18 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTT....................................................................................................................................................... 16 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.....................................TTCAACGAGGAATTCC...................................................................................................................................................................................................................................................................................................................................... 16 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CCTGGGTAGGTTGGTCTTG.......................................................................................................................................................... 19 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTTGCTCCTGGGTAGGTTGGT.............................................................................................................................................................. 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GTCTTGGTTGGGTGGCTGTTT........................................................................................................................................... 21 0 8 0.13 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................TTGTGGGTAGGTTGGTCTTGGTTGA.................... 25 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCTTGGTTGTGTGGCTGTTTCTCGT...................................................................................................................................... 25 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTCGTCCAAATC............................................................................................................................... 25 0 9 0.11 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................TGGGTAGGTTGCTTCTTGGTA.................................................................. 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTGTGGGTAGGTTGGTCTTGGTTGA..................................................................................................................................................... 25 3 9 0.11 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................CTTGGTAGGTTGCTCCTTGGT.................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................GGTGGGTAGGTTGCTCC........................................................................ 17 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTCGTCCAAATCGGC............................................................................................................................ 28 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCCA................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAG......................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TCTTGGTTGTGTGGCTGTTTCTCGTCC.................................................................................................................................... 27 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGG............................................................................................................................. 23 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGA.......................................................................................................................... 26 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAA......................................................................................................................... 27 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGCTCCTTGGT.................................................... 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................TCCTTGGTAGGTTGCTCCTTGGTAGG................................................. 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCC.................................................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAATTCGGCGAGA........................................................................................................................ 28 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCCAAAT................................................................................................................................ 29 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGCTCCTTGGTAG.................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TGTGGCTGTTTCTCGTCCAAATCGGCG........................................................................................................................... 27 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................GGTTGCTCCTGGGTAGG................................................................................................................................................................... 17 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGCTGCTTGGTAGGTTGCTCCTTGG..................................................... 25 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGGTTGCTCCTGGGTAGGT.................................................................................................................................................................. 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................TGGGTAGGTTGCTCCTTGGTAGGTGCCA........................................................... 28 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................................CTGTTTCTTGTCCAA. 15 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0
..........................................................................................................................................................................................................................................CTGTTTCTTGTCCAA.................................................................................................................................. 15 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCG....................................................................................................................................... 22 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTC........................................................................................................................................ 21 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGCTCCTTGGTAGGTGCCA............................................ 28 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGCTCCTTGGTAGGTTGCTCCTTG...................................................... 24 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................TGCTCCTTGGTAGGTTGCTCCTT....................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTC........................................................................................................................................ 16 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCGGTCTTGGTTGGGAAAC............... 20 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................................ATCGGTAGATTGGTCTT.......................... 17 2 12 0.08 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTTGGGCTTGATTGGGTAAC............... 20 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTAGGGCTTGCTTGGGTAAC............... 20 3 13 0.08 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................CTCCTTGGTAGGTTGCTCCTT....................................................... 21 0 13 0.08 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................................................................GGTTGCTCCTTGGTAGGTTGC............................................................ 21 0 14 0.07 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCGGGCTTGGTGGGGTAAC............... 20 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................GTAGGTTGCTCCTTGGTAGGT................................................ 21 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................GTAGGTTGCTCCTTGGTAGGT............................................................... 21 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................GAAGTATCGCGATCAATTC................................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................TAGGTGGCTCCTGGG....................................................................................................................................................................... 15 1 17 0.06 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GTCGGGCTTGGTTGGGTAAT............... 20 3 18 0.06 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................TGGAGGTATCACGAGT........................................................................................................................................................................................................................................................ 16 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGG................................................................ 19 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGG................................................. 19 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GTCGGGCTTGGTTGGGAGGC................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................CGGCGAAAAAGTTTTG................................................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCGTCCAAATCGGCGA.......................................................................................................................... 17 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

CCGAGGAAGGTAACATAACCTCCATTGTTATCCTCGGAAGTTGCTCCTTAATGCGGTATTACTATTTGATATGCTTGATCATCAGTTGCAGCTGTGAGGTATATCTAAGCCAAGCAGCTCCATAGTGCTAATTAAGTTTTCTGATCGGTTTGTAGGCGGATATAATAAATGACGCATAGACTTAGGCAACGTTCGTGATCCAACGAGGACCCATCCAACCAGAACCAACCCACCGACAAAGAGCAGGTTTAGCCGCTCTTTCAAAACCCGGTGGAGCAAGTGAGCGCCGTCCACCCATCCAACGAGGAACCATCCAACGAGGAACCATCCAAGGAGTACCCATCCAACCAGAACCAACCCATTGACAAAGAGCAGGTTT
**********************************************************......(((((((((......)))))))))........(((((((((......)))..))))))((((.(((((....))))).))))..*************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.........................................................................................................................................................................................................................................................................................................................................................................TTGACAAAGAGCAGGA.. 16 1 9 10.22 92 58 29 1 0 3 1
.......................................................................................................................................................................................AGACAACGTTCGTTATC................................................................................................................................................................................... 17 2 12 6.58 79 79 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................AACCAACCCATTGACAAAGAGCAGGTTT 28 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................................TTGACAAAGAGCAGG... 15 0 2 1.00 2 0 2 0 0 0 0
...............................................................................................................................................................................................................................................................................TGGAGCAAGTGAGCGCCGTCCAC..................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................GTGGAGCAAGTGAGCGCCGTC........................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1
...............................................................................................................................................................................................................................................................................................................................................................AACCAACCCATTGACAAAGAGCAGGTT. 27 0 1 1.00 1 1 0 0 0 0 0
............................................................ACTATTTGAGATGATTGATGAT......................................................................................................................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................................................ACCAACCCATTGACAAAGAGCAGGTTT 27 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................CCAACGAGGACCCATCCAAC................................................................................................................................................................ 20 0 9 1.00 9 0 0 0 9 0 0
..........................................................................................................................................................................................................................................................................................................................................................................TGACAAAGAGCAGGA.. 15 1 20 0.75 15 12 3 0 0 0 0
...............................................................................................................................................................................................................................ACCAACCCACCGACAAAGA......................................................................................................................................... 19 0 10 0.60 6 0 0 0 6 0 0
..............................................................................................................................................................................................................................................................................................................CGAGGAACCATCCAACGAGGAACCAT................................................... 26 0 8 0.25 2 0 0 2 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TTTGACAAAGAGCAGG... 16 1 5 0.20 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................................AATTGACAAAGAGCAG.... 16 1 5 0.20 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................................TTTGACAAAGAGCAG.... 15 1 13 0.15 2 2 0 0 0 0 0
............................................................................................................................................................................................................GAGGACCCATCCAACCAGAACCAAC...................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................GACAAAGAACAGGTTTAGT.............................................................................................................................. 19 2 16 0.13 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................CGTCCACCCATCCAACGAGGAACCAT.................................................................. 26 0 8 0.13 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................GAGGAACCATCCAACGAGGAACCA.................................................... 24 0 9 0.11 1 0 0 1 0 0 0
...AGGAAGGTAATATAA......................................................................................................................................................................................................................................................................................................................................................................... 15 1 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................................................AGAGCAGGTTTAGCCG............................................................................................................................ 16 0 12 0.08 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................GGCCGACAAAGACCAGGTTTA................................................................................................................................ 21 3 13 0.08 1 1 0 0 0 0 0
................................................................................................................ATGAGCTCCATAGTGCTC......................................................................................................................................................................................................................................................... 18 3 14 0.07 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................CCAACGAGGAACCATCCA............................................................... 18 0 16 0.06 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................CCAACGAGGAACCATCCA................................................ 18 0 16 0.06 1 0 0 1 0 0 0
...................................................................................................................................................TTTGGTAGGCGGATATACT..................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................AAGGGGTACCTATCCA................................. 16 2 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................GGGGCAAGTGAGCGGCG.......................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:19065627-19066005 - dsi_14447 GGCTCCTTCCATTGTATTGGAGGTAACAATAGGAGCCTTCAACGAGGAATTACGCCATAATGATAAACTATACGAACTAGTAGTCAACGTCGACACTCCATATAGATTCGGTTCGTCGAGGTATCACGATTAATTCAAAAGACTAGCCAAACATCCGCCTATATTATTTACTGCGTATCTGAATCCGTTGCAAGCACTAGGTTGCTCCTGGGTAGGTTGGTCTTGGTTGGGTGGCTGTTTCTCGTCCAAATCGGCGAGAAAGTTTTGGG-----------CCACCTCGTTCACTCGCGGCAGGTGGGTAGGTTGCTCCTTGGTAGGTTGC---------------------------TCCTTGGTAGGTTC--CTCATGGGTAGGTTGGTCTTGGTTGGGTAACTGTTTCTCGTCCAAA
droSec2 scaffold_9:1838278-1838444 - TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTGCTCCTGGGTAGGTTGGTCTTGTTTGGGTGGCTGTTTCTCGTCCAAATCGGCGAGAAACTTTTGGG-----------CCACCTCGATCACACGCGGCAGGTGG---------------GTAGGTTGCTCCTTGGTAGGTTGC------------TCC-----------------TGGGTAGGTTGGTCTTGGTTGGGTGACTGTTTCTCGTCCAAA
dm3 chr2R:18538150-18538265 - GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCGAGAAACTTTTGGG-----------CCACCTCGTTCAGACGCGGCTGGTAGGTAGGTTGGTCCTGGGTGGGTTGG---------------TCTTGGTTCTGTTCCTCAGTAAACTCGC-----------------------------TTTGG------------
droEre2 scaffold_4845:12439298-12439388 + GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCAAGAAACTTTTGGG-----------CCACCTCGTTCAGACGAGGCTGGTGG---------TCGTGGGTAGGTGGC------------------------TGCTTCTCAGTAAACTC------------------------------------------------
droYak3 2R:18048579-18048592 + GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:6212618-6212705 + GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCCAAAAACTTTTGGG-----------CCACCTCGTTCAGTCGCGGCTGGTGG---------TCATGGGTCACTGGC---------------------------TTCTCAGTAAATTC------------------------------------------------
droBia1 scf7180000301623:95102-95244 + TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGCTGGACGGTGGGTGGCCTGTTGGTGGGTGGCTGGTT-----------------------TGTGGGCCTGTTGGTGGGCGGCTCATTGGTAGGTGGCCTGTTG---------------GTGGGTGGCTCATTGGTGGGAGGC------------TCA-----------------TTGGTGGGAGGCTCATTGGTGGGGGGCTGA------------
droTak1 scf7180000415739:165184-165271 + GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAGTCGGCCAGGAACTTCTGCG-----------CCACCTCGTTCAGCCGCGGCTGGTGG---------TCATGGGTGGCTGGC---------------------------TTCTCAGCAAACTC------------------------------------------------
droEle1 scf7180000490713:152759-152859 - GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAGTCGGCCAGAAACTTTTGGG-----------CCACCTCATTCAGACGCGGCTGATGG---------TCATGAGTTGCGGGC---------------------------TTCTCAGTAAATTCGC-----------------------TTGGAGGTTCC------------
droRho1 scf7180000780011:15181-15194 + GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:7456231-7456244 - GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCTCCTTCCATTGTATTGGAGGTAACAATAGGAGCCTTCAACGAGGAATTACGCCATAATGATAAACTATACGAACTAGTAGTCAACGTCGACACTCCATATAGATTCGGTTCGTCGAGGTATCACGATTAATTCAAAAGACTAGCCAAACATCCGCCTATATTATTTACTGCGTATCTGAATCCGTTGCAAGCACTAGGTTGCTCCTGGGTAGGTTGGTCTTGGTTGGGTGGCTGTTTCTCGTCCAAATCGGCGAGAAAGTTTTGGG-----------CCACCTCGTTCACTCGCGGCAGGTGGGTAGGTTGCTCCTTGGTAGGTTGC---------------------------TCCTTGGTAGGTTC--CTCATGGGTAGGTTGGTCTTGGTTGGGTAACTGTTTCTCGTCCAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGC---------------------------TCCTTGGTAGGTTC--..............................................2611.00100000000001000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAGA................................................................................................................................................................2890.78700000050002000000
....................................CTTCAACGAGGAATTC...............................................................................................................................................................................................................................................................................................................................................................................1640.50200000000110000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTC.............................................................................................................................................................................2490.33300000001002000000
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGTG..........................................................................................................................................................................................2560.33200000010000010000
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTTGGGTG..........................................................................................................................................................................................2160.33200000000002000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGT..................2470.29200000000002000000
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGGGT...........................................................................................................................................................................................2470.29200000000002000000
......................................................................................................................................................................................................................GGTTGGTCTTGGTTGGGTGG.........................................................................................................................................................................................2070.29200000000002000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGC....................................................................................................................................................................2490.22200000020000000000
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTTGGGTGGCTG......................................................................................................................................................................................2560.17100000000001000000
...................................................................................................................................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGGTTGC---------------------------TC............................................................25130.15200000000002000000
..................................................................................................................................................................................................................GGTAGGTTGGTCTTGGTTGGG............................................................................................................................................................................................2170.14100000000001000000
..........................................................................................................................................................................................................TGCTCCTGGGTAGGTTGGTCTTGGTT...............................................................................................................................................................................................2670.14100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGG....................2270.14100000000001000000
...............................................................................................................................................................................................................................................................................................................................TGGTAGGTTGC---------------------------TCCTTGGTAGGTT.................................................2470.14100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................GGTAGGTTGGTCTTGGTTGGG...................2170.14100000000001000000
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGGTTGG.............................................................................................................................................................................................2270.14100000000001000000
................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGG.................................................................................................................................................................................................1880.13100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................TAGGTTGGTCTTGGTT......................1680.13100000000001000000
.........................................................................................................................................................................................................................TGGTCTTGGTTGGGTGGCTGTTTCT.................................................................................................................................................................................2580.13100000000001000000
........................................................................................................................................................................................................................TTGGTCTTGGTTGGGTG..........................................................................................................................................................................................1780.13100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................TGGGTAGGTTGGTCTTGG........................1880.13100000000001000000
....................................................................................................................................................................................................................TAGGTTGGTCTTGGTT...............................................................................................................................................................................................1680.13100000000001000000
..............................................................................................................................................................................................................CCTGGGTAGGTTGGTCTTG..................................................................................................................................................................................................1980.13100000000001000000
........................................................................................................................................................................................................GTTGCTCCTGGGTAGGTTGGT......................................................................................................................................................................................................2180.13100000000001000000
...........................................................................................................................................................................................................................GTCTTGGTTGGGTGGCTGTTT...................................................................................................................................................................................2180.13100000000010000000
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTCGTCCAAATC.......................................................................................................................................................................2590.11100000001000000000
.............................................................................................................................................................................................................................................................................................................................CTTGGTAGGTTGC---------------------------TCCTTGGT......................................................2190.11100000000001000000
.............................................................................................................................................................................................................................................................................................................GGTGGGTAGGTTGCTCC.....................................................................................................1790.11100000000001000000
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTCGTCCAAATCGGC....................................................................................................................................................................2890.11100000010000000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCCA...........................................................................................................................................................................2690.11100000000001000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAG.................................................................................................................................................................2790.11100000000001000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGG.....................................................................................................................................................................2390.11100000010000000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGA..................................................................................................................................................................2690.11100000010000000000
.......................................................................................................................................................................................................................................TGGCTGTTTCTCGTCCAAATCGGCGAA.................................................................................................................................................................2790.11100000010000000000
..............................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGC---------------------------TCCTTGGT......................................................2090.11100000000001000000
...........................................................................................................................................................................................................................................................................................................................TCCTTGGTAGGTTGC---------------------------TCCTTGGTAGG...................................................2690.11100000000001000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCC............................................................................................................................................................................2590.11100000000001000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCGTCCAAAT........................................................................................................................................................................2990.11100000010000000000
..............................................................................................................................................................................................................................................................................................................................TTGGTAGGTTGC---------------------------TCCTTGGTAG....................................................2290.11100000000001000000
.......................................................................................................................................................................................................GGTTGCTCCTGGGTAGG...........................................................................................................................................................................................................17100.10100000000001000000
......................................................................................................................................................................................................AGGTTGCTCCTGGGTAGGT..........................................................................................................................................................................................................19100.10100000000001000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTCG...............................................................................................................................................................................22100.10100000010000000000
..............................................................................................................................................................................................................................TTGGTTGGGTGGCTGTTTCTC................................................................................................................................................................................21100.10100000000000100000
........................................................................................................................................................................................................................................................................................................................TGCTCCTTGGTAGGTTGC---------------------------TCCTTG........................................................24110.09100000000001000000
........................................................................................................................................................................................................................................................................................................................TGCTCCTTGGTAGGTTGC---------------------------TCCTT.........................................................23110.09100000000001000000
...................................................................................................................................................................................................................................TGGGTGGCTGTTTCTC................................................................................................................................................................................16110.09100000000001000000
..........................................................................................................................................................................................................................................................................................................................CTCCTTGGTAGGTTGC---------------------------TCCTT.........................................................21130.08100010000000000000
.....................................................................................................................................................................................................................................................................................................................GGTTGCTCCTTGGTAGGTTGC---------------------------..............................................................21140.07100000000001000000
.................................................................................................................................................................................................................................................................................................................................GTAGGTTGC---------------------------TCCTTGGTAGGT..................................................21150.07100000000001000000
..................................................................................................................................................................................................................................................................................................................GTAGGTTGCTCCTTGGTAGGT............................................................................................21150.07100000000001000000
...................................................................................................................................................................................................................................................................................................................TAGGTTGCTCCTTGGTAGG.............................................................................................19190.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................TAGGTTGC---------------------------TCCTTGGTAGG...................................................19190.05100000000001000000
droSec2
TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTGCTCCTGGGTAGGTTGGTCTTGTTTGGGTGGCTGTTTCTCGTCCAAATCGGCGAGAAACTTTTGGG-----------CCACCTCGATCACACGCGGCAGGTGG---------------GTAGGTTGCTCCTTGGTAGGTTGC------------TCC-----------------TGGGTAGGTTGGTCTTGGTTGGGTGACTGTTTCTCGTCCAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................ATCACACGCGGCAGGTGG---------------GTAGGTTG..........................................................................................2630.3310100
..........................................................................................................................................................................................................................................................................................................................................TCCTTGGTAGGTTGC------------TCC-----------------TGGG......................................2290.2222000
..............................................................................................................................................................................................................................................................................................................................................................................................AGGTTGGTCTTGGTTGGGT..................1970.1410100
..........................................................................................................................................................................................................................................................................................................................................TCCTTGGTAGGTTGC------------TCC-----------------TGGGT.....................................2390.1110010
..........................................................................................................................................................................................................................................................................................................................................TCCTTGGTAGGTTGC------------TCC-----------------TGGGTA....................................2490.1111000
dm3
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCGAGAAACTTTTGGG-----------CCACCTCGTTCAGACGCGGCTGGTAGGTAGGTTGGTCCTGGGTGGGTTGG---------------TCTTGGTTCTGTTCCTCAGTAAACTCGC-----------------------------TTTGG------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................TCCTCAGTAAACTCGC-----------------------------TTC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGGGTGGGTTGG---------------TCTTGGTT..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................TCGTCCAAATCGGCGAGAAACTTTTGGG-----------C..........................................................................................................................................2930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TCCAAATCGGCGAGAAACTTTTGGG-----------C..........................................................................................................................................2640.2510000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CAAATCGGCGAGAAACTTTTGGG-----------C..........................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEre2
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCAAGAAACTTTTGGG-----------CCACCTCGTTCAGACGAGGCTGGTGG---------TCGTGGGTAGGTGGC------------------------TGCTTCTCAGTAAACTC------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAATCGGCCAAAAACTTTTGGG-----------CCACCTCGTTCAGTCGCGGCTGGTGG---------TCATGGGTCACTGGC---------------------------TTCTCAGTAAATTC------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGCTGGACGGTGGGTGGCCTGTTGGTGGGTGGCTGGTT-----------------------TGTGGGCCTGTTGGTGGGCGGCTCATTGGTAGGTGGCCTGTTG---------------GTGGGTGGCTCATTGGTGGGAGGC------------TCA-----------------TTGGTGGGAGGCTCATTGGTGGGGGGCTGA------------SizeHit CountTotal NormTotal
No Reads
droTak1
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAGTCGGCCAGGAACTTCTGCG-----------CCACCTCGTTCAGCCGCGGCTGGTGG---------TCATGGGTGGCTGGC---------------------------TTCTCAGCAAACTC------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAGTCGGCCAGAAACTTTTGGG-----------CCACCTCATTCAGACGCGGCTGATGG---------TCATGAGTTGCGGGC---------------------------TTCTCAGTAAATTCGC-----------------------TTGGAGGTTCC------------SizeHit CountTotal NormTotal
No Reads
droRho1
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCTCGTCCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads

Generated: 05/19/2015 at 05:46 AM