ID:

dsi_1439

 Coordinate:

2l:8874610-8874873 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -18.9 -18.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

CACGTTTCACAAAGAAAAAAGATCAACTCAATAGTTGTAGCCATAGAAAAGTGCGTAGAAAAGGCACCGAAACGCAGGGGAAGAGTTGGCACAGCCCAAAAAGAAAGAAGAAAAAAGCAATGCAAAGTGCGCGTGTGTGTTTACGTGTGCGTCCGTGTGTGTGAGTGCGTGTCTTATCCGTCGCTCCCATTGCAAAAACAAAAAAGTATCTTTCAGATACACGACAATTATCCAAGACCAAAACAGCAGAAATCTAATAATCAGCTTAGGTTCTCCCGTTTATTTTTTTAACAATTAGGGTTTTGAAGAAAATTTCCTCGTTTCGTTGCGGAATTTTTGTGTGGCGTTCCATTGCCCAAACGTT
************************************************************************************************************************************************((.((.(((..((((((.(((((((.........)).))))).)).))))...........((((((...))))))...............)))))..))....(((((((((........))))))).)).**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 M024
male body		 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
................................................................................................................................................GTGTGCGTCCGTGTGTGTGAGT...................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................AATCAGCTTAGGTTCTCC........................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................TTTCCTCGTTTCGTTGCGG................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TCCAGTAATCAGCTTGGGT............................................................................................. 19 3 13 0.46 6 0 0 0 6 0 0 0 0
.............................................................................................................................................................................................................................................................CCAGTAATCAGCTTGGGT............................................................................................. 18 3 20 0.20 4 0 0 0 4 0 0 0 0
.....................................................................................................................................................CGTCGGTGTTTGTGAGTGCGG.................................................................................................................................................................................................. 21 3 9 0.11 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................ATTAGGGTTTTGATGCAA..................................................... 18 2 9 0.11 1 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................ATCCAGTAATCAGCTTGGG.............................................................................................. 19 3 20 0.10 2 0 0 0 2 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TACGGAATTTTTTTGTCGCG.................. 20 3 12 0.08 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TGAGTTCGTGTCTTA............................................................................................................................................................................................ 15 1 12 0.08 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TTGTAGAAAATTTCGTCTTTT......................................... 21 3 12 0.08 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................GCGTAGGTCCTCCCGT..................................................................................... 16 2 14 0.07 1 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................................................GGGGTTTGAAGAAAA.................................................... 15 1 15 0.07 1 0 0 0 0 0 1 0 0
......................................AGCCATAGACACTTGCGTA................................................................................................................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................GTCTTAACCGTCGCG................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................AAGACCGAAACAGCA.................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

GTGCAAAGTGTTTCTTTTTTCTAGTTGAGTTATCAACATCGGTATCTTTTCACGCATCTTTTCCGTGGCTTTGCGTCCCCTTCTCAACCGTGTCGGGTTTTTCTTTCTTCTTTTTTCGTTACGTTTCACGCGCACACACAAATGCACACGCAGGCACACACACTCACGCACAGAATAGGCAGCGAGGGTAACGTTTTTGTTTTTTCATAGAAAGTCTATGTGCTGTTAATAGGTTCTGGTTTTGTCGTCTTTAGATTATTAGTCGAATCCAAGAGGGCAAATAAAAAAATTGTTAATCCCAAAACTTCTTTTAAAGGAGCAAAGCAACGCCTTAAAAACACACCGCAAGGTAACGGGTTTGCAA
****************************************************************************************((.((.(((..((((((.(((((((.........)).))))).)).))))...........((((((...))))))...............)))))..))....(((((((((........))))))).)).************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
........................................................................................................................................................................................................................TAGGTGCTGGAAATAGGTTCT............................................................................................................................... 21 3 3 2.67 8 0 8 0 0 0 0 0 0 0
...................................................................................................................................................ACGCAGCCACAAACACTCACGC................................................................................................................................................................................................... 22 2 1 2.00 2 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................TAGAAAGTCTATGTGCTGTT......................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................CGCAGCCACAAACACTCACG.................................................................................................................................................................................................... 20 2 4 1.50 6 0 0 0 6 0 0 0 0 0
......AGTGTTTCTTTTCTCTTG.................................................................................................................................................................................................................................................................................................................................................... 18 2 14 1.29 18 0 0 0 0 9 0 0 2 7
...........................................................................................................................................................................................................................................................................................................................................................AGGTAACGAGTTTGC.. 15 1 12 1.08 13 0 0 0 0 0 0 6 7 0
.......................................................................................................................................................................................................................CTATGTGCTGTTAATAGGTTC................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................TCAACCGTGTCGGGTTTTTC..................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................GTTCTGGTTTTGTCGTCTTTA............................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.....AAGTGTTTCTTTTCTCTTG.................................................................................................................................................................................................................................................................................................................................................... 19 2 6 0.83 5 0 0 0 0 5 0 0 0 0
........................................................................................................................................................................................................................TAGGTGCTGGAAATAGGTTC................................................................................................................................ 20 3 4 0.50 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGTGCTGGAAATAGGTTCTG.............................................................................................................................. 21 3 2 0.50 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................GGAAAGTCTATGTCCTGATA........................................................................................................................................ 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................GAAAGTCTATGTCCCGATA........................................................................................................................................ 19 3 17 0.18 3 0 0 0 0 0 0 3 0 0
...........................................................................................................................................................................................................................................................................................................................GGAGGAAAGCAACGCCTA............................... 18 2 6 0.17 1 0 0 0 0 0 0 0 0 1
....................................................................................................................................................CGCAGCCACAAACACTCACGT................................................................................................................................................................................................... 21 3 19 0.16 3 0 0 0 2 0 1 0 0 0
....................................................................................................................................................................................ACCGAGGGTAGCGTTTT....................................................................................................................................................................... 17 2 13 0.15 2 0 0 0 2 0 0 0 0 0
..................................................................................................................................................................................................................................................................................GGGCCAAGAAAAAAATTG........................................................................ 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GAAAGTCTATGTCCCGAT......................................................................................................................................... 18 3 20 0.10 2 0 0 0 0 0 0 2 0 0
.................................................................CGGCTTTGCGTCCCCTAAT........................................................................................................................................................................................................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CCGGGAGGTAACGAGTTTG... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CAAACACAACTGCTCACGCA.................................................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TAGGTGCTGGAAATAGGTT................................................................................................................................. 19 3 16 0.06 1 0 1 0 0 0 0 0 0 0
...............................................................................................GGTTTATCTCTCTTCTT............................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8874560-8874923 + dsi_1439 CACGTT--TCAC-----AAAGA----------AAAAA-GATCAACTCAATAGTTGTAGCCA----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCACCG--------AAACGCAGG-GGAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-AG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTCCGTGTGT--------GTGAGT--GCGTG------TCTTATCCGT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTCAG---------A--TACACGACAATTATCCAAGACC-AAAACAGCAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------
droSec2 scaffold_3:4641774-4642142 + TACGTT--TCAC-----AAAGA----------ATAAAGGATCAACTCAAAAGTTGTAGCCG----------------------------------------------TAG---AAAAGTGCGTAGAA---AA---------AG-------GCACCG--------AAACGCAGG-GGAAGAGGTGGCCACAGGCCCTAAAAAGA--A-AG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTCCGTGTGT--------GTGAGT--GCGTG------TCTTATCCGT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCCTTCAG---------A--CACACGACAATTATCCAAGACC-AAAACAGCAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGCTCTCCCGTATAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCTT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------
dm3 chr2L:9176498-9176861 + CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTCAAAAGTTGTAGCCA----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCACCA--------AAACGCAGG-GAAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-AT---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCTT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTCAG---------A--TACACGACAATTATCCAAGACC-AAAACAGCAGAAATTTAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------
droEre2 scaffold_4929:9782240-9782618 + CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTGAA-AGTTATAGCCG----------------------------------------------CAG---AAAAGTGCGTAGAA---A----------AG-------GCACCA--------AAACGAAGG-GGAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-TG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCGT---CGCTCCCTTTG-----------------------------CAAAA-ACA---A----------------------------------------------------------ACAAGTATCGTTCAG---------A--TACACGACAATTATCCAAGACC-CAAACAGTAGAAATCTTATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTATTGCTTTTTTGTTGTGT------------T--TT--T---G---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTTG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------
droYak3 2L:11845199-11845570 + CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTGAA-AGTTATAGCCG----------------------------------------------TAG---AAAAGTGCGTAGTA---A----------AG-------GCAGCA--------AAACGAAGG-GGAAGAGTTGGC-ACTG-CCC-AGAAAGA--A-AG---------AA-GA------TAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTGACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCGT---CGCTCCCTTTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTTAG---------A--TACACGACAATTATCCAAGACCAAAAACAGCAGAAATCTAATAATT------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT------TTATTT----------------T--TT--T-TTG---TAACAAT------------TAGGT--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CGAAACGTT---------------------
droEug1 scf7180000409554:294280-294665 - CACGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTTTAGTCG----------------------------------------------TAGCAAAAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCATCA--------AAACGAAGA-AGAAAAGTTGGC-ACAG-CCC-AAAAAGC--A-AG---------AAGGC------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTAT--------GTGAGT--GCGTG------TCTCTACCGT---CGCTCCCTTTG-----------------------------CAAAA-AAAGAAAA-------ACAAATT-----------------------------------------AACAAAGTATCTTTCAG---------A--TACACGACAATTAAACAATACA-ACAATATCTGAAATTTC--AAAC------------------------------------------------------------------------AGCTTAGGTTTTCCT-------------------------------------TT--T-TTGAATGAACAAT------------TAGGT--------------------TTTGA--A--AGAAATTT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCACATTT-CCAAACGTT---------------------
droBia1 scf7180000302408:4043049-4043425 - CACGTT--TCCC-----AAAGA----------ATGAA-GATCAACTGAA-AGTTATGGTCGT-----------G---------------------------------CAC---AAAAGTGCGTAGAA---A----------AC-------GCAGCA--------AAACGTAGA-GGAAAAGTTGGC-GCAG-CCC-AGTAAAAAAAATA---------AA-GAAATCAAAAGAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------CCTCCGCCGT---CGCTCCCTTTG-----------------------------CGAAA-ATA---A----------------------------------------------------------TAAAGTATCTTTCGG---------A--TACACGACAGTTAGCCAAGACA-AGAACTGCATAAATCTGATAATC------------------------------------------------------------------------AGCTTAGGTTTTCCTGTGTTT----------------------------TTTCGCTG---T---TAACAAT------------TAGGG--------------------TTTGG-----TAAAATTT-TCCT---C-GTTTCG-TTGCGGAATTT-T--AGTGTGGC----GTTCCAC-TGC-CGAAACGTT---------------------
droTak1 scf7180000415702:350510-350882 - CACGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTATAGTCG----------------------------------------------TAC-AGGAAAGTGCGTAGAA---AAAGCAGAAA-CC-------GCAGCA--------AAATGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-TC---------AA-AT------AAAAAG-------AAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTGCCGT---CGCTCCCTTTG-----------------------------CAAAA-AAA---AA-------AC-----------------------------------------------AAAAAGTATCTTTCAG---------A--TACACGACAATTAACCAGGACA-AAAACATCTGAAATCTGATAATC------------------------------------------------------------------------AGCTTAGGTTTTCCTACTTAT----------TT----------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTA--A--AGAAATTT-TCCC---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCGC-TGC-CCAACCGTT---------------------
droEle1 scf7180000491186:2101097-2101457 + GGCGTT--CCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTACAGCCGTGT----ATCTTGCG-------------------------GA----TAC---AAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCA--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-------------A-GA------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGC----GTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTCCCTTTG-----------------------------CAAAA-A-----------------------------------------------------------------ATAGTTTCTCCCAG---------A--TACACGACAATTACTTGGGAGC-AAAGCAACATATATCTAATAGTTAT--------------C-------------------------------------------------ATCA-----TTAA-TT---------------------------------------T--TT--C---T---TAACAAT------------TTGGG--------------------TTTAA--A--AGAAATTT-TCCT---------CG-TTGCGGAATTT-C--TGTGTGAC----GTTCCGC-TGC-CCAAACGTT---------------------
droRho1 scf7180000777214:54808-55173 - GGCGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTACAGCCGTGT----ATCTTGCG-------------------------GA----TAC---CAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCA--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-AG---------AA---------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTCCCTTTG-----------------------------CAAAA--------------------------------------------------------------------AAGTATCTCCCCG---------A--TACACGACAATAACTTAAGACC-GTAGCAACATAAATCTAATAATTAC--------------C-------------------------------------------------ATCC-----ATAGT-T---------------------------------------T--TT--TTT-T---GAACAAT------------TAGGT--------------------TTTTA--A--AGAAATTT-TCCT---------CG-TTGCGGAATTT-T--TGTGTAGC----GTTCCGT-TGT-CCACACGTT---------------------
droFic1 scf7180000453934:38973-39352 - GGCGTTTTTCAC-----AAAGA----------ATAAA-GATCAACTCAA-AGTTATGGCCG--T----ATCTTGCG-------------------------GA----TGC---AAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCT--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-GA---------AA-GA-----AAAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTC-CTTTG-----------------------------CAAAA-AA----A----------------------------------------------------------AATCGTATCTTTCAG---------A--TACACGACAATTACTTGAGACA-AGAGCAACAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGTTCT-------AT----------------------------T--TT--G-TTG---TAACAAT------------TAGGG--------------------TTTTA--A--AGAAATTT-TCCT---A-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAC-TGCCCAAAACGTC---------------------
droKik1 scf7180000302679:1042094-1042489 + AGGAAT--TAA---------AG----CCC---ACTGA-GATCGACTGAA-AGTCA------------------------------------------------------C---TAAAGTGCCGAAAAAGAAACGCAGAAAGCAGCACTTGGC--CAAAAAGAAAAAATAAATA-CAAAAAGTTGGC-GCTG-CCC-AAAAAAA--AATAATAATAAGAAA-GA------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTATGTGTGCGTGCGGGCGTGAGTGTGTGTCTGAGTGCGTG------TTGTT---------TTTTCCTCCG-----------------------------CCAA--------------------------------------------------------------------AATGAATCTTTCAGATATGCAAGATATGCACGACAATTAACGCAGA----AAACTATAGAAACTTA---------------------------------------------------------------AACCGAATAATTGGTAGTTTAGGT-------------------------------------------TT--G---T---TAACAATTTCG--------GAA-G--------------------ATTAA--A--CGAAATTTTTCTC---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC---TGTTTCAC-TGC-C-AAACGTT---------------------
droAna3 scaffold_12943:525722-526073 + CAAATC--CAAC-----TGCCA----------ACTGA-AATCGACTGGA--GTTAA----GCGT----ATCTTGCA-------------------------GA----TAC---AAAAGTGCGTAGAA---C--GT-------A-------GCAGC-------------GAAGAAAGAAAAGTTGGC-GCAG-CCC-AAAAAA---------------------------AAGAAGCAAAGCAAAGTGCGCGTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------TTTT-GCCGTTTCCTCTCCCT-TG-----------------------------GAGAT------------------ACT----------------------------------------------CTTGTATCTTTA---TCTGTAAGA--TACCCAACAACCA----GGGCA---GACTGAAGAAGAATC------------------TCT------------------------------------------AATAAAATAATTGGTAGATTAGGC-----AG-------------------------------------T--T---T---TAACAATCC-A--------CAAGA--------------------TTTAA--A--CAAAATTT-TCATCTGC-GCTTCG-TTGCGGAATTT-TTTTGTGTGGC----GTTCCAC-TAA-CC-AGCGTT---------------------
droBip1 scf7180000396535:198051-198461 - CGCAAA--TCCC-----AACCAACTGCCAACTGCTGA-AATCGACTGGA--GTTAA----GCGT----ATCTTGCA-------------------------GA----TAC---AAAAGTGCGTAGAA---C--GT-------A-------GCAGC-------------AAAGA-AAAAAAGTTGGC-GCAG-CCC-AAAAAAAAAAG-AAAAGAAAGAAA-GA-----AAAGAAGCAAAGCAAAGTGCGCGTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------TTTTGCCCGTTTCCTCTCCCTTTG-----------------------------GGAGA-----------------TACTCT-----------------------------------------T--CTTGTATCTTTA---TCTG----A--T-------AGATAGCTAGGACA---GACTGAAGAAGCTCT---------------------------------------------------------------AATAAAATAATTGGCAGATTAGGC----CTG----G----------------------------T--TT--T---T---TAATAATCCAA----GAGGTGGGA-------------------TTTTTGAAA-CAGAAATTT-TCATCTGC-GTTTCG-TTGCGGAATTT-TTTTGTGTGGC----GTTCCAC-TAA-CC-AGCGTTCCTGCTCTCCATCTTCATGCT
dp5 4_group5:1488439-1488788 + CTGA------AT-----AATAA----------CTAAA-AGTCGACTAAA-AGATACAAAAG--A----ATCTT----------------------------------------GAAAGTGCGTT-----------------TC-------GTAGC-------------AAAGG-AAAAAAGTTGGC-GCAG-CCC-ACAAAAAAA-----------------A------GAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTGTGT--------GTGTGT--------GTGAGT--GCGTG------TTGT------------TTCCTTTG-----------------------------AAGA-------------GCAGATACTTT-----------------------------------------TGAGAAGTATCTTTGAA---------A--TAACTAGAAATTATGAAT------------------------AATTAAACAAACTTCCTCCAA-------------------------------------------------ATTCGT---------------------AGATATTTATTTGAGTTTTTGATTTGAGT--TT--G-CTC---CAAAAAT-------------------------------------TT-TG-AG--TACTATTT-TCTT---CGATTTTG-TTGCGGAATTTCT--TGTGTGGCGGACGTTCCAC-CGC-CCCAACGTT---------------------
droPer2 scaffold_5:5896368-5896717 + CTGA------AT-----AATAA----------CTAAA-AGTCGACTAAA-AGATACAAAAG--T----ATCTT----------------------------------------GAAAGTGCGTT-----------------TC-------GTAGC-------------AAAGG-AAAAAAGTTGGC-GCAG-CCC-ACAAAAAAA-----------------A------GAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTGTGT--------GTGTGT--------GTGAGT--GCGTG------TTGT------------TTCCTTTG-----------------------------AAGA-------------GCAGATACTTT-----------------------------------------TGAGAAGTATCTTTGAA---------A--TAACTAGAAATTATGAAT------------------------AATTAAACAAACTTCCTCCAA-------------------------------------------------ATTCGT---------------------AGATATTTATTTGAGTTTTTGATTTGAGT--TT--A-TTC---CAAAAAT-------------------------------------CT-AG-AG--TACTATTT-TCTT---CGATTTTG-TTGCGGAATTTCT--TGTGTGGCGGACGTTCCAC-CGC-CCCAACGTT---------------------
droWil2 scf2_1100000004521:151766-152213 + CATTT----GGC-----TAAG-----------------------CCAAA-ATTTATAACTAAATCAACAATTTGTGGCTAA----------ATTATTATCAAATCTTTTA---CAAAGTGCGCAAAA---A----------AG-------TTA---------------------AATAAAGTTGGC-GTAG-CCC-AAAAGAAGAAG-AAAAAATAGAAT-AAAATTTCAAAAAGCAAAGCAAAGTGCGCGTG------------TGTCTCTGTGTGAGTGTGTGTTCGT--------GTGCGT--GTTTATCTGTGTGTTTGC-G-------------TGAGAGGTTCTAGTTTCGTTTGTTTCCATCAAAAAATACC---AAAACGCAGATTCCGCAAAGTTGGCGA-AAAGTGCTAAACA----AAACAAAACCTA---TTTGAA--TTTT-----------A--ATTATAGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T--TT--T-G-T---G-AAAAC-TAAAATCAAAGTAGATTTGAAAGGCAACAGAATCATTTGCG--ATAAGGAA-TT-TTCT-----ATTTGGTTTATGGAATTT-TTGTAAATGGT----GTTTCAT-TTGCCACATTGTT---TCTCTCT----------T
droVir3 scaffold_12963:561026-561403 + CACAAC--TAACTGGCCAAACA----------ATTGT-GAA----------------------T----ATCTAG---CTAAAT-ATCTACAGTTATA-AAATA----TAA---GAAAGTGCGCAAAA---A----------------------------------------GC-AAATCACTTGAC-GCAA-CCC-AATAAAG---------------AA-AA------AATAAATAAAGCAAAGTGCGTGCGTTCAACTGTGTGTGTGTGTGTGTGTGT----GTGTGTGTGT----GTGTGT--GTGTATGAGTGTGCTTGCTAG---TGTGCT--------------TGTTTTGAGTGTTTG-----CAAC-------------GCAAATAACACTC---------------------------------------AATAAAGCAACATTTT----------A--TGCTTTACAATATATTAACAAC------------------------------------------------------------AAGAA--AAACTGTAAAACAAATATC-----------------ATTTGTGTGCATAT----------------------------T--TTCTT---T---T--------------------------------------------------A--CGACAATT-TTTC---A-ACTCGG-TTACGGAATTT-T--TGTGTCGC----GTTTCAT-TGC-CAGCGCGT----------------------
droMoj3 scaffold_6500:12068687-12069049 + CACATC--TAACTAGCCAAACA----------ATTGT-GAA----------------------T----ATATTGGG-CTGTTTGATCTACAGTTTTG-A-AAATCTATAT---AAAAGTGCGCAAAA---A----------------------------------------GC-AAATCACTTGGC-GCAG-CCC-AACAAAAAAAG------------------------CAAAAGATGCAAAGTGCGTGCATTCAAT------TGTGAGCGTGTGTGCCTGCGTGATT--------GTTGGTGTGCGTG------TGTTTT--GG---A---GTCTTTG-----------------------------CAAT---------------------------------------------------------------------------------------------------GCAAATTATTCACAATA-AAACCCA-----------------------TATTCATTGTATTAGAATATATACGTTTTAGGAAGCTAACTGGAAAACGTATTTA-----------------ATTCGTGTGTCT--------------------------------------------------AT------------TTGCT--------------------TTTTA--C--AACAATTT-TTCC---A-ACTTGG-TTACGGAATTT-T--TGTGTCGC----GTTTCAT-TGC-CAGCTCGTC---------------------
droGri2 scaffold_15126:3057304-3057661 - AACTCT--ATCC-----AAACA----------ATAGT-GAA---TTAAT-AGCAACAAAT------------------------ATCTACAATTATTCAAAAA----TCT---CAAAGTGCACACAA---A----------AA-------GC----------------------GAA---------------TCA-AAAAAAA--A-AT---------AT-AA------AAGGAGAAAAGCAAAGTGTGTGTG------------TGCGTGTGTGTGTTGGTGTGTGTGT--------GTGTGT--GTGTG------CGTTAAGTGT-----------TTG-----------------------------CAAC-------------GCAAATTGCTCGCAATTCGCCACCAACTGCCCAAGTTTGC------------TG---CCAACAATTCAA---------A--AATATTGCAATTTTATTGAAAA-CAAACTGCACAAAAATCACAA-------------------------------------------------------------AAA-----------------AGTGTTTTGTATAT----------------------------T--TTCTT---T---CAAAA-------------------------------------------------ATAA---A-TTTC---A-ATTCGG-TTACGGAATTT-T--AGTGTCTC----GTTTCAT-TGC-CACCGTGTC---------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CACGTT--TCAC-----AAAGA----------AAAAA-GATCAACTCAATAGTTGTAGCCA----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCACCG--------AAACGCAGG-GGAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-AG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTCCGTGTGT--------GTGAGT--GCGTG------TCTTATCCGT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTCAG---------A--TACACGACAATTATCCAAGACC-AAAACAGCAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................GTGTGCGTCCGTGTGT--------GTGAGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC------------------------------------------------------------------------AGCTTAGGTTCTCC......................................................................................................................................................................................................1811.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TCCT---C-GTTTCG-TTGCGG...............................................................1911.00101000000000000000
droSec2
TACGTT--TCAC-----AAAGA----------ATAAAGGATCAACTCAAAAGTTGTAGCCG----------------------------------------------TAG---AAAAGTGCGTAGAA---AA---------AG-------GCACCG--------AAACGCAGG-GGAAGAGGTGGCCACAGGCCCTAAAAAGA--A-AG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTCCGTGTGT--------GTGAGT--GCGTG------TCTTATCCGT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCCTTCAG---------A--CACACGACAATTATCCAAGACC-AAAACAGCAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGCTCTCCCGTATAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCTT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................AAGTTGTAGCCG----------------------------------------------TAG---AAAAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................GTTGTAGCCG----------------------------------------------TAG---AAAAGTGCGTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.........................................................................................................................................................................................................................................AGCAATGCAAAGTGCGCGTG------------TGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
..............................................................................................................................................................................................................................................................................TTACGTGTGCGTCCGTGTGT--------GTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............................................................................................................................................................................................................................................................G------------TGTGTTTACGTGTGCGTCCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AGAAAATT-TCTT---C-GTTTCG-TTGCGGAA.............................................................2811.0011000
.......................................................................................................................................................................................................................................................................................CGTCCGTGTGT--------GTGAGT--GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.......................................................................................................................................................................................................AAGA--A-AG---------AA-GA------AAAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.0610001
dm3
CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTCAAAAGTTGTAGCCA----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCACCA--------AAACGCAGG-GAAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-AT---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCTT---CGCTCCCATTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTCAG---------A--TACACGACAATTATCCAAGACC-AAAACAGCAGAAATTTAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG-TTGCGGAATTT-T--TGTGTGGC----..........................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................CGCAGG-GAAAGAGTTGGC-ACAG-CCC-AA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................ATGCAAAGTGCGCGTG------------TGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCCT---C-GTTTCG-TTGCGGAATTT-T--TG....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ACGCAGG-GAAAGAGTTGGC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CACGTT--TCAC-----GAAGA----------ATAAA-GATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGAATTT-T--TGTGTGGC----GTTC......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCCCGTTTAT----------------------------T--TT--T---T---TAACAAT------------.................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AA---A----------AG-------GCACCA--------AAACGCAGG-GAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TG------------TGTGTTTACGTGTGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-T--TGTGTGGC----GTTCCAT-T.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................AAAAGTTGTAGCCA----------------------------------------------TAG---AAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGACAATTATCCAAGACC-AAAACA.............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCG-TTGCGGAATTT-T--TGTGTGGC----..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CGCGTG------------TGTGTTTACGTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTGGC-ACAG-CCC-AAAAAGA--A-AT---------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCGCGTG------------TGTGTTTACGTGTGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................TAG---AAAAGTGCGTAGAA---A----------AG-------G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG-TTGCGGAATTT-T--TGTGTGGC----..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTTTCG-TTGCGGAATTT-T--TGTGTGG...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT----------------------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTG--A--..............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AAGAGTTGGC-ACAG-CCC-AAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGT......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................A--------AAACGCAGG-GAAAGAGTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCAG---------A--TACACGACAATTATCCAA........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG-TTGCGGAATTT-T--TGTGTG................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAATTT-T--TGTGTGGC----..........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AAAAAGA--A-AT---------AA-GA------AAAAAGCAATGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------TAGGG--------------------TTTTG--A--AGAAAAT.......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGT...................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCT---C-GTTTCG-TTGCGGAATTT-T--T.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................CGTG------------TGTGTTTACGTGTGCGTGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................AAAAGTTGTAGCCA----------------------------------------------TAG---AAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................A-ACA---A----------------------------------------------------------AAAAGTATCTTTCAG---------A--TACACGAC..................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGTTTACGTGTGCGTGCGTGTGT--------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AATGCAAAGTGCGCGTG------------TGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTT..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTACGTGTGCGTGCGTGTGT--------GTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................TTGGC-ACAG-CCC-AAAAAGA--A-AT---------AA-GA------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................A----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................CACCA--------AAACGCAGG-GAAAGAGTTGGC-AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GCACCA--------AAACGCAGG-GAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................A----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACGTGTGCGTGCGTGTGT--------GTGAGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................CCA----------------------------------------------TAG---AAAAGTGCGTAGAA---A----------AG-------GCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAC-----GAAGA----------ATAAA-GATCAACTCAAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-.....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................GTTTACGTGTGCGTGCGTGTGT--------GTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------TAGGG--------------------TTTTG--A--AGAA..........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................AAGTTGTAGCCA----------------------------------------------TAG---AAAAGTGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--T...............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CACCA--------AAACGCAGG-GAAAGAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CA--------AAACGCAGG-GAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT----------------------------T--................................................................................................................................................................2711.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AAGA--A-AT---------AA-GA------AAAAAGCAATGCAAAGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTTCTCCCGTTTAT----------------------------T--TT--............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGTTTACGTGTGCGTGCGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CC-AAAAAGA--A-AT---------AA-GA------AAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTACGTGTGCGTGCGTGTGT--------GTGAGT--G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGTGCGTGCGTGTGT--------GTGAGT--GCGTG------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------TAGGG--------------------TTTTG--A--AGAAAA........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GTG------------TGTGTTTACGTGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG--A--AGAAAATT-TCCT---C-GTTTCG-TT...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACCA--------AAACGCAGG-GAAAGAGTTGGC-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTTTCAG---------A--TACACGACAATTATC...........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................G------------TGTGTTTACGTGTGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGCGCGTG------------TGTGTTTACGTGTGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................AGCAATGCAAAGTGCGCGTG------------TGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GCACCA--------AAACGCAGG-GAAAGAGTTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T---TAACAAT------------TAGGG--------------------TTTTT--.................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TACGTGTGCGTGCGTGTGT--------GTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................ACGTGTGCGTGCGTGTGT--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACGTGTGCGTGCGTGTGT--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................................................................................................................GTGCGTGCGTGTGT--------GTGAGT--G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTGTGCGTGCGTGTGT--------GTGAGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000
...................................................................................................................................................................................................................................................................................TGTGCGTGCGTGTGT--------GTGAGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGTGCGTGCGTGTGT--------GTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTGCGTGCGTGTGT--------GTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................CGTGTGCGTGCGTGTGT--------GTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GTGCGTGTGT--------GTGAGT--GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTGAA-AGTTATAGCCG----------------------------------------------CAG---AAAAGTGCGTAGAA---A----------AG-------GCACCA--------AAACGAAGG-GGAAGAGTTGGC-ACAG-CCC-AAAAAGA--A-TG---------AA-GA------AAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCGT---CGCTCCCTTTG-----------------------------CAAAA-ACA---A----------------------------------------------------------ACAAGTATCGTTCAG---------A--TACACGACAATTATCCAAGACC-CAAACAGTAGAAATCTTATAATC------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTATTGCTTTTTTGTTGTGT------------T--TT--T---G---TAACAAT------------TAGGG--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTTG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CCAAACGTT---------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-T--TGTGTGGC----GTTCCAT-TGC-CCA...........................24129.002900000029
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------------TAGGG--------------------TTTTG--A--AGAAAAT.......................................................................................2111.0010000010
..................................................................................................................................................................................................................................................................................................................GCGTG------TCTTTTCCGT---CGCTCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCCAAGACC-CAAACAGT...........................................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................................................................................................................................................................................................G------------TGTGTTTACGTGTGCGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..............................................................................................................................................................................................................................................................................................GTGT--------GTGAGT--GCGTG------TCTTTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................G---AAAAGTGCGTAGAA---A----------AG-------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.........................................................................................................................................................................................................................................AGCAATGCAAAGTGCGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.................GAAGA----------ATAAA-GATCAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410001000
....................................................................................................................................................................................................................................................................................GTGCGTGCGTGTGT--------GTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310001000
droYak3
CACGTT--TCAC-----GAAGA----------ATAAA-GATCAACTGAA-AGTTATAGCCG----------------------------------------------TAG---AAAAGTGCGTAGTA---A----------AG-------GCAGCA--------AAACGAAGG-GGAAGAGTTGGC-ACTG-CCC-AGAAAGA--A-AG---------AA-GA------TAAAAGCAATGCAAAGTGCGCGTG------------TGTGTTGACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTCCGT---CGCTCCCTTTG-----------------------------CAAAA-ACA---A----------------------------------------------------------AAAAGTATCTTTTAG---------A--TACACGACAATTATCCAAGACCAAAAACAGCAGAAATCTAATAATT------------------------------------------------------------------------AGCTTAGGTTCTCCCGTTTAT------TTATTT----------------T--TT--T-TTG---TAACAAT------------TAGGT--------------------TTTTG--A--AGAAAATT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAT-TGC-CGAAACGTT---------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................GTAGTA---A----------AG-------GCAGCA--------AAACGAAGG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGAATTT-T--TGTGTGGC----..........................................1911.00100000010000
..........................................................................................................................................................................................................................AA-GA------TAAAAGCAATGCAAAGTGCGCGTG------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................................................................................................A--------AAACGAAGG-GGAAGAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
......................................GATCAACTGAA-AGTTATAGCCG----------------------------------------------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................A----------AG-------GCAGCA--------AAACGAAGG-GGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTGCGGAATTT-T--TGTGTGGC----..........................................2111.00100000010000
...........................................................................................................TAG---AAAAGTGCGTAGTA---A----------AG-------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
.............................................................................................................G---AAAAGTGCGTAGTA---A----------AG-------G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................................................................................................................................................................GAGTTGGC-ACTG-CCC-AGAAAGA--A-AG---------AA-G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................................GTA---A----------AG-------GCAGCA--------AAACGAAGG-GGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................................................CAGCA--------AAACGAAGG-GGAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCG-TTGCGGAATTT-T--TGTGT.................................................2311.00100000010000
.............................................................................................................................................................................................................A-AG---------AA-GA------TAAAAGCAATGCAAAGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................AG---AAAAGTGCGTAGTA---A----------AG-------GCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................................GATCAACTGAA-AGTTATAGCCG----------------------------------------------TAG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTTAG---------A--TACACGACAATT..............................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................................................................................................................................................GTGCGTGCGTGTGT--------GTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.17100010000000
droEug1
CACGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTTTAGTCG----------------------------------------------TAGCAAAAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCATCA--------AAACGAAGA-AGAAAAGTTGGC-ACAG-CCC-AAAAAGC--A-AG---------AAGGC------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTAT--------GTGAGT--GCGTG------TCTCTACCGT---CGCTCCCTTTG-----------------------------CAAAA-AAAGAAAA-------ACAAATT-----------------------------------------AACAAAGTATCTTTCAG---------A--TACACGACAATTAAACAATACA-ACAATATCTGAAATTTC--AAAC------------------------------------------------------------------------AGCTTAGGTTTTCCT-------------------------------------TT--T-TTGAATGAACAAT------------TAGGT--------------------TTTGA--A--AGAAATTT-TCCT---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCACATTT-CCAAACGTT---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CACGTT--TCCC-----AAAGA----------ATGAA-GATCAACTGAA-AGTTATGGTCGT-----------G---------------------------------CAC---AAAAGTGCGTAGAA---A----------AC-------GCAGCA--------AAACGTAGA-GGAAAAGTTGGC-GCAG-CCC-AGTAAAAAAAATA---------AA-GAAATCAAAAGAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------CCTCCGCCGT---CGCTCCCTTTG-----------------------------CGAAA-ATA---A----------------------------------------------------------TAAAGTATCTTTCGG---------A--TACACGACAGTTAGCCAAGACA-AGAACTGCATAAATCTGATAATC------------------------------------------------------------------------AGCTTAGGTTTTCCTGTGTTT----------------------------TTTCGCTG---T---TAACAAT------------TAGGG--------------------TTTGG-----TAAAATTT-TCCT---C-GTTTCG-TTGCGGAATTT-T--AGTGTGGC----GTTCCAC-TGC-CGAAACGTT---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CACGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTATAGTCG----------------------------------------------TAC-AGGAAAGTGCGTAGAA---AAAGCAGAAA-CC-------GCAGCA--------AAATGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-TC---------AA-AT------AAAAAG-------AAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTGCCGT---CGCTCCCTTTG-----------------------------CAAAA-AAA---AA-------AC-----------------------------------------------AAAAAGTATCTTTCAG---------A--TACACGACAATTAACCAGGACA-AAAACATCTGAAATCTGATAATC------------------------------------------------------------------------AGCTTAGGTTTTCCTACTTAT----------TT----------------T--TT--T---T---TAACAAT------------TAGGG--------------------TTTTA--A--AGAAATTT-TCCC---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCGC-TGC-CCAACCGTT---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGCGTT--CCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTACAGCCGTGT----ATCTTGCG-------------------------GA----TAC---AAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCA--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-------------A-GA------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGC----GTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTCCCTTTG-----------------------------CAAAA-A-----------------------------------------------------------------ATAGTTTCTCCCAG---------A--TACACGACAATTACTTGGGAGC-AAAGCAACATATATCTAATAGTTAT--------------C-------------------------------------------------ATCA-----TTAA-TT---------------------------------------T--TT--C---T---TAACAAT------------TTGGG--------------------TTTAA--A--AGAAATTT-TCCT---------CG-TTGCGGAATTT-C--TGTGTGAC----GTTCCGC-TGC-CCAAACGTT---------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGCGTT--TCAC-----AAAGA----------ATAAA-GATCAACTGAA-AGTTACAGCCGTGT----ATCTTGCG-------------------------GA----TAC---CAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCA--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-AG---------AA---------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTCCCTTTG-----------------------------CAAAA--------------------------------------------------------------------AAGTATCTCCCCG---------A--TACACGACAATAACTTAAGACC-GTAGCAACATAAATCTAATAATTAC--------------C-------------------------------------------------ATCC-----ATAGT-T---------------------------------------T--TT--TTT-T---GAACAAT------------TAGGT--------------------TTTTA--A--AGAAATTT-TCCT---------CG-TTGCGGAATTT-T--TGTGTAGC----GTTCCGT-TGT-CCACACGTT---------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGCGTTTTTCAC-----AAAGA----------ATAAA-GATCAACTCAA-AGTTATGGCCG--T----ATCTTGCG-------------------------GA----TGC---AAAAGTGCGTAGAA---AACGTAGAAA-AC-------GCAGCT--------AAACGAAGA-GGAAAAGTTGGC-GCAG-CCC-AAAAAGA--A-GA---------AA-GA-----AAAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTACGTGTGCGTGCGTGTGT--------GTGAGT--GCGTG------TCTTTTTCGT---CGCTC-CTTTG-----------------------------CAAAA-AA----A----------------------------------------------------------AATCGTATCTTTCAG---------A--TACACGACAATTACTTGAGACA-AGAGCAACAGAAATCTAATAATC------------------------------------------------------------------------AGCTTAGGTTCT-------AT----------------------------T--TT--G-TTG---TAACAAT------------TAGGG--------------------TTTTA--A--AGAAATTT-TCCT---A-GTTTCG-TTGCGGAATTT-T--TGTGTGGC----GTTCCAC-TGCCCAAAACGTC---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGGAAT--TAA---------AG----CCC---ACTGA-GATCGACTGAA-AGTCA------------------------------------------------------C---TAAAGTGCCGAAAAAGAAACGCAGAAAGCAGCACTTGGC--CAAAAAGAAAAAATAAATA-CAAAAAGTTGGC-GCTG-CCC-AAAAAAA--AATAATAATAAGAAA-GA------AAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTATGTGTGCGTGCGGGCGTGAGTGTGTGTCTGAGTGCGTG------TTGTT---------TTTTCCTCCG-----------------------------CCAA--------------------------------------------------------------------AATGAATCTTTCAGATATGCAAGATATGCACGACAATTAACGCAGA----AAACTATAGAAACTTA---------------------------------------------------------------AACCGAATAATTGGTAGTTTAGGT-------------------------------------------TT--G---T---TAACAATTTCG--------GAA-G--------------------ATTAA--A--CGAAATTTTTCTC---C-GTTTCG-TTGCGGAATTT-T--TGTGTGGC---TGTTTCAC-TGC-C-AAACGTT---------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CAAATC--CAAC-----TGCCA----------ACTGA-AATCGACTGGA--GTTAA----GCGT----ATCTTGCA-------------------------GA----TAC---AAAAGTGCGTAGAA---C--GT-------A-------GCAGC-------------GAAGAAAGAAAAGTTGGC-GCAG-CCC-AAAAAA---------------------------AAGAAGCAAAGCAAAGTGCGCGTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------TTTT-GCCGTTTCCTCTCCCT-TG-----------------------------GAGAT------------------ACT----------------------------------------------CTTGTATCTTTA---TCTGTAAGA--TACCCAACAACCA----GGGCA---GACTGAAGAAGAATC------------------TCT------------------------------------------AATAAAATAATTGGTAGATTAGGC-----AG-------------------------------------T--T---T---TAACAATCC-A--------CAAGA--------------------TTTAA--A--CAAAATTT-TCATCTGC-GCTTCG-TTGCGGAATTT-TTTTGTGTGGC----GTTCCAC-TAA-CC-AGCGTT---------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................CGTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAAATAATTGGTAGATTAGGC-----AG-------------------------------------T--............................................................................................................................................................2711.001010000
....................................................................ATCTTGCA-------------------------GA----TAC---AAAAGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GCTTCG-TTGCGGAATTT-TTTTGTGTGGC----..........................................2911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTGGC----GTTCCAC-TAA-CC-AGC........................2511.001001000
..........................................................................................................................................................................................................................................................GTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................GTG------------TGTGT--------------GCGTGT--------GTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.101000001
droBip1
CGCAAA--TCCC-----AACCAACTGCCAACTGCTGA-AATCGACTGGA--GTTAA----GCGT----ATCTTGCA-------------------------GA----TAC---AAAAGTGCGTAGAA---C--GT-------A-------GCAGC-------------AAAGA-AAAAAAGTTGGC-GCAG-CCC-AAAAAAAAAAG-AAAAGAAAGAAA-GA-----AAAGAAGCAAAGCAAAGTGCGCGTG------------TGTGT--------------GCGTGT--------GTGAGT--GCGTG------TTTTGCCCGTTTCCTCTCCCTTTG-----------------------------GGAGA-----------------TACTCT-----------------------------------------T--CTTGTATCTTTA---TCTG----A--T-------AGATAGCTAGGACA---GACTGAAGAAGCTCT---------------------------------------------------------------AATAAAATAATTGGCAGATTAGGC----CTG----G----------------------------T--TT--T---T---TAATAATCCAA----GAGGTGGGA-------------------TTTTTGAAA-CAGAAATTT-TCATCTGC-GTTTCG-TTGCGGAATTT-TTTTGTGTGGC----GTTCCAC-TAA-CC-AGCGTTCCTGCTCTCCATCTTCATGCTSizeHit CountTotal NormTotal
No Reads
dp5
CTGA------AT-----AATAA----------CTAAA-AGTCGACTAAA-AGATACAAAAG--A----ATCTT----------------------------------------GAAAGTGCGTT-----------------TC-------GTAGC-------------AAAGG-AAAAAAGTTGGC-GCAG-CCC-ACAAAAAAA-----------------A------GAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTGTGT--------GTGTGT--------GTGAGT--GCGTG------TTGT------------TTCCTTTG-----------------------------AAGA-------------GCAGATACTTT-----------------------------------------TGAGAAGTATCTTTGAA---------A--TAACTAGAAATTATGAAT------------------------AATTAAACAAACTTCCTCCAA-------------------------------------------------ATTCGT---------------------AGATATTTATTTGAGTTTTTGATTTGAGT--TT--G-CTC---CAAAAAT-------------------------------------TT-TG-AG--TACTATTT-TCTT---CGATTTTG-TTGCGGAATTTCT--TGTGTGGCGGACGTTCCAC-CGC-CCCAACGTT---------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTT---CGATTTTG-TTGCGGAATTTCT--......................................................2511.0010100000000
......................................................ACAAAAG--A----ATCTT----------------------------------------GAAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................AA----------CTAAA-AGTCGACTAAA-AGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................TGTGTTTGTGT--------GTGTGT--------GTGAGT--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-------------------------------------------------ATTCGT---------------------AGATATTGG......................................................................................................................................................................................1870.1410100000000
droPer2
CTGA------AT-----AATAA----------CTAAA-AGTCGACTAAA-AGATACAAAAG--T----ATCTT----------------------------------------GAAAGTGCGTT-----------------TC-------GTAGC-------------AAAGG-AAAAAAGTTGGC-GCAG-CCC-ACAAAAAAA-----------------A------GAAAAGCAAAGCAAAGTGCGCGTG------------TGTGTTTGTGT--------GTGTGT--------GTGAGT--GCGTG------TTGT------------TTCCTTTG-----------------------------AAGA-------------GCAGATACTTT-----------------------------------------TGAGAAGTATCTTTGAA---------A--TAACTAGAAATTATGAAT------------------------AATTAAACAAACTTCCTCCAA-------------------------------------------------ATTCGT---------------------AGATATTTATTTGAGTTTTTGATTTGAGT--TT--A-TTC---CAAAAAT-------------------------------------CT-AG-AG--TACTATTT-TCTT---CGATTTTG-TTGCGGAATTTCT--TGTGTGGCGGACGTTCCAC-CGC-CCCAACGTT---------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTTTTGATTTGAGT--TT--A-TTC---CAAA................................................................................................................................................2811.001010000
.....................................................................................................................GTGCGTT-----------------TC-------GTAGC-------------AAAGG-AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................TACAAAAG--T----ATCTT----------------------------------------GAAAGTGCGTT-----------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATTT-TCTT---CGATTTTG-.....................................................................1911.001010000
CTGA------AT-----AATAA----------CTAAA-AGTCGACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................G--T----ATCTT----------------------------------------GAAAGTGCGTT-----------------TC-------GTAGC-------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............................................................................................................................................................................................................................................................................................GTGT--------GTGAGT--GCGTG------TTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.672000002
..........................................................................................................................................................................................................................................................GTG------------TGTGTTTGTGT--------GTGTGT--------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
droWil2
CATTT----GGC-----TAAG-----------------------CCAAA-ATTTATAACTAAATCAACAATTTGTGGCTAA----------ATTATTATCAAATCTTTTA---CAAAGTGCGCAAAA---A----------AG-------TTA---------------------AATAAAGTTGGC-GTAG-CCC-AAAAGAAGAAG-AAAAAATAGAAT-AAAATTTCAAAAAGCAAAGCAAAGTGCGCGTG------------TGTCTCTGTGTGAGTGTGTGTTCGT--------GTGCGT--GTTTATCTGTGTGTTTGC-G-------------TGAGAGGTTCTAGTTTCGTTTGTTTCCATCAAAAAATACC---AAAACGCAGATTCCGCAAAGTTGGCGA-AAAGTGCTAAACA----AAACAAAACCTA---TTTGAA--TTTT-----------A--ATTATAGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T--TT--T-G-T---G-AAAAC-TAAAATCAAAGTAGATTTGAAAGGCAACAGAATCATTTGCG--ATAAGGAA-TT-TTCT-----ATTTGGTTTATGGAATTT-TTGTAAATGGT----GTTTCAT-TTGCCACATTGTT---TCTCTCT----------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGGCGA-AAAGTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................GTTTATCTGTGTGTTTGC-G-------------TGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
........................................................................................................................................................................................................................................................................................................................CTGTGTGTTTGC-G-------------TGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............................................................................................................................................G-------TTA---------------------AATAAAGTTGGC-GTAG-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.......................................................................................................................................................TA---------------------AATAAAGTTGGC-GTAG-CCC-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..................................................................................................................................................................................................................................................................................................................GTTTATCTGTGTGTTTGC-G-------------TGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...........................................................................................................TTA---CAAAGTGCGCAAAA---A----------AG-------TTA---------------------AAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTAGATTTGAAAGGC...................................................................................................................1911.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAAGTAGATTTGAAAGGC...................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................CAGATTCCGCAAAGTTGGCGA-....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...................................................................................................................................................................................................................................................AGTGCGCGTG------------TGTCTCTGTGTGAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
droVir3
CACAAC--TAACTGGCCAAACA----------ATTGT-GAA----------------------T----ATCTAG---CTAAAT-ATCTACAGTTATA-AAATA----TAA---GAAAGTGCGCAAAA---A----------------------------------------GC-AAATCACTTGAC-GCAA-CCC-AATAAAG---------------AA-AA------AATAAATAAAGCAAAGTGCGTGCGTTCAACTGTGTGTGTGTGTGTGTGTGT----GTGTGTGTGT----GTGTGT--GTGTATGAGTGTGCTTGCTAG---TGTGCT--------------TGTTTTGAGTGTTTG-----CAAC-------------GCAAATAACACTC---------------------------------------AATAAAGCAACATTTT----------A--TGCTTTACAATATATTAACAAC------------------------------------------------------------AAGAA--AAACTGTAAAACAAATATC-----------------ATTTGTGTGCATAT----------------------------T--TTCTT---T---T--------------------------------------------------A--CGACAATT-TTTC---A-ACTCGG-TTACGGAATTT-T--TGTGTCGC----GTTTCAT-TGC-CAGCGCGT----------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................GTGCTTGCTAG---TGTGCT--------------TGTTTTGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TGAGTGTGCTTGCTAG---TGTGCT--------------TG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CT--------------TGTTTTGAGTGTTTG-----CAAC-------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-T--TGTGTCGC----GTTTCAT-TGC-CAGCG.........................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................ATGAGTGTGCTTGCTAG---TGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................AATAAAGCAAAGTGCGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCGC----GTTTCAT-TGC-CAGC..........................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................GTTATA-AAATA----TAA---GAAAGTGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--CGACAATT-TTTC---A-ACTCGG-.....................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATAACACTC---------------------------------------AATAAAGCAACATTTT----------A--T.........................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTCAACTGTGTGTGTGTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000000000000000100000000000000000000000
droMoj3
CACATC--TAACTAGCCAAACA----------ATTGT-GAA----------------------T----ATATTGGG-CTGTTTGATCTACAGTTTTG-A-AAATCTATAT---AAAAGTGCGCAAAA---A----------------------------------------GC-AAATCACTTGGC-GCAG-CCC-AACAAAAAAAG------------------------CAAAAGATGCAAAGTGCGTGCATTCAAT------TGTGAGCGTGTGTGCCTGCGTGATT--------GTTGGTGTGCGTG------TGTTTT--GG---A---GTCTTTG-----------------------------CAAT---------------------------------------------------------------------------------------------------GCAAATTATTCACAATA-AAACCCA-----------------------TATTCATTGTATTAGAATATATACGTTTTAGGAAGCTAACTGGAAAACGTATTTA-----------------ATTCGTGTGTCT--------------------------------------------------AT------------TTGCT--------------------TTTTA--C--AACAATTT-TTCC---A-ACTTGG-TTACGGAATTT-T--TGTGTCGC----GTTTCAT-TGC-CAGCTCGTC---------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................AA---A----------------------------------------GC-AAATCACTTGGC-GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................................................ATATTGGG-CTGTTTGATCTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...............................................................................................TG-A-AAATCTATAT---AAAAGTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGAAGCTAACTGGAAAACGT...................................................................................................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGGAATTT-T--TGTGTCGC----..........................................1911.001000001
.............................................................................................................................................................................................................................................................................................TGATT--------GTTGGTGTGCGTG------TGTTTT--GG---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTA-----------------ATTCGTGTGTCT--------------------------------------------------AT------------TTGCT--------------------TT......................................................................................................2611.001100000
droGri2
AACTCT--ATCC-----AAACA----------ATAGT-GAA---TTAAT-AGCAACAAAT------------------------ATCTACAATTATTCAAAAA----TCT---CAAAGTGCACACAA---A----------AA-------GC----------------------GAA---------------TCA-AAAAAAA--A-AT---------AT-AA------AAGGAGAAAAGCAAAGTGTGTGTG------------TGCGTGTGTGTGTTGGTGTGTGTGT--------GTGTGT--GTGTG------CGTTAAGTGT-----------TTG-----------------------------CAAC-------------GCAAATTGCTCGCAATTCGCCACCAACTGCCCAAGTTTGC------------TG---CCAACAATTCAA---------A--AATATTGCAATTTTATTGAAAA-CAAACTGCACAAAAATCACAA-------------------------------------------------------------AAA-----------------AGTGTTTTGTATAT----------------------------T--TTCTT---T---CAAAA-------------------------------------------------ATAA---A-TTTC---A-ATTCGG-TTACGGAATTT-T--AGTGTCTC----GTTTCAT-TGC-CACCGTGTC---------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................AGGAGAAAAGCAAAGTGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101
...........................................................................................................................................................................................................................................................................CGTGTGTGTGTTGGTGTGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17101
....................................................................................................................................................................................................................................................GTGTGTGTG------------TGCGTGTGTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101

Generated: 05/19/2015 at 01:31 AM