ID:

dsi_14342

 Coordinate:

2r:16002916-16003097 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.6 -9.3 -9.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATAGCTTCTTTAACTGGATAAGCGGCTTGCTAAATAGGCCCATCAGTTCTTATGATATTGTTTTACTCTGTGCATTGCGAATCCAAATTATTTTTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCAATTTAGTGACCGAGAGACTGTGACTTTTACTGCGATTGCTTCTCCAATGTTCCCTCATTGTGCTCTAATAGAATTTAACAAGATGGTCTTTTCGAAATAAAAGCAACAAAGCTGCGCCTGAATTGTGATTGTTGTGCCACAAAATACACAAAA
************************************************************************************************************************************....(((((((((((.((((........((.((((......))))))....)))).)).)))).................)))))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M023
head
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
....................................................................................................................................TAGTGACCGAGAGACTGTGAC................................................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................TGATATTGTTTTACACTGGGCAA............................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................ATTTAGTGACCGAGAGACTGT.................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TTTTACTGCGATTGCTTCTCCAATGTT...................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................ATAGAATTTAACAAGATGGTC................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................GTGACCGAGAGACTGTGACTTTT............................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................GTGACCGAGAGACTGTGACTT............................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................TTAGTGACCGAGAGACTGTGA.................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................AGAGACTGTGACTTTTACTG......................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................................................................CGCCTGAATTGTGATTGTT.................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......CTTTAACTGGATAAGCGGCTTTCT........................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................CGAGAGACTGTGACTTTTAC........................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TGACTTTTACTGCGATTG................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................TTGTTTTACTCTGTGCATTGCGA.......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AGCAACAAAGCTGCGCCTGAATTGT........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................ACAAAGCTGCGCCTGAATTGTGATTGTT.................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................TGAATTGTGATTGTTGTGCCACAAAA......... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................TTCTTATGGTATTGTTTT.......................................................................................................................................................................................................................... 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..AGCTTCTTTAAATGGA........................................................................................................................................................................................................................................................................ 16 1 5 0.20 1 0 0 0 0 1 0 0 0 0
.............................................................................................................CCGCGGTGAATGTGTT............................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
.......................................................................................TTATTCTGGCTCAGTACGA................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

TATCGAAGAAATTGACCTATTCGCCGAACGATTTATCCGGGTAGTCAAGAATACTATAACAAAATGAGACACGTAACGCTTAGGTTTAATAAAAACGAGTCATTCTAACCGTGCCACTTACACAAACGTTAAATCACTGGCTCTCTGACACTGAAAATGACGCTAACGAAGAGGTTACAAGGGAGTAACACGAGATTATCTTAAATTGTTCTACCAGAAAAGCTTTATTTTCGTTGTTTCGACGCGGACTTAACACTAACAACACGGTGTTTTATGTGTTTT
*****************************************************************....(((((((((((.((((........((.((((......))))))....)))).)).)))).................)))))************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
..TCGAAGCCATTGACCTAATCG................................................................................................................................................................................................................................................................... 21 3 1 2.00 2 0 2 0 0 0
...................................TCCGGGTAGTCAAGAATAC.................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...................................TCCGGGTAGTCAAGAATACTA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................GTTACAAGGGAGTAACACGAG........................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................TAAAAACGGGTCAGTCTAAC............................................................................................................................................................................. 20 2 3 0.33 1 0 0 1 0 0
.............................................................................................................................................................................................ACGAGATTATCGTAAAT............................................................................ 17 1 5 0.20 1 0 0 0 1 0
..........................................................................................................................................................CAATGACGCTAGCGAA................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0
.............................................................AGATGAGGCACGTAAC............................................................................................................................................................................................................. 16 2 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................TCAAAATGACGCTAA.................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:16002866-16003147 + dsi_14342 ATAGCTTCTTTAA-CT-----------------------GGAT-----AAGCGGCTTGC-----------TAAATAGGCCCATCAGTTCTTATGA-------------------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAA
droSec2 scaffold_376:6752-7033 + ATAGCTTCTTTAA-CA-----------------------GGAT-----AAGCGGCTTGC-----------TAAATAGGCCTATCAGTTCTTATGA-------------------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCAAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAA
dm3 chr2R:15351611-15351896 + ATACCTTCTTTAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------TTAATGGACCTATCAGTTCTTATGA---TT--GT----------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCC-----AATTATTTGTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAA
droEre2 scaffold_4845:9550210-9550491 + CTGGCAATTTTAA-CT-----------------------GGCT-----AAGCGGCTTGC-----------TTAATGGGACTATCAATTCTTATGA-------------------------------------------------------TATTGTTTTTACTCTGCACATTGCGAATCCC-----AATTATTTTTACTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTC-CT---------------CAT-TGTG---------TTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCAGAATT-GTGA-TTGCTGTGCCACAAA-----ATAC------A----------------------CAAAA
droYak3 2R:13824406-13824676 - ATACCTAATTTAA-CT-----------------------GGTT-----AAGCGGCTTGC-----------TAAATGGGACTATCAATTCTTATGA-------------------------------------------------------TATTGTTTTTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCCGAGTAAAAT------------TGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GTGCCTGAATT-GTGA-TTGCTGTGCCACAAA-----ATAC------A----------------------CAAAA
droEug1 scf7180000409474:2603974-2604236 - TCTT------TCC-AT------ATAAACGTTTTTCACGGGAGTTTTTGA----------------------------------------TGATGA-------------------------------------------------------TATTGTT-TAGCTCTGTGCATCACGAA-CTA-----AAA-------------TAAGATTGTGGCCGTGACTGTGACTGTAATTGCAGTGTGATTTCGTGACTGAGAGCCT-------GT--GACTTTTACTGCGACTGTTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATTTTAACAAGATGGACTTTT-CGGAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATTTGTGA-TTGT---GCCACACA-----CA--------A----------------------CAAAA
droBia1 scf7180000302143:2840981-2841194 + TTAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTGAATCATCTA-CCA-----AAATATTTGTGCTCTGTAAGAATGCGGCTGCGACTGTGATTGC---------------TAGTGACTT--AGCCA-------GT--GACTTGGGCTGCGACTGCTTCTCCAATGTTCCCT---------------GAT-TGTGCTGA----GCTCTAATAGAACT-AAACAAGACGGACTTTTTCGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCCGAATT-GTGA-TTGT---GCCACCCA--------C------G----------------------CAAAG
droTak1 scf7180000415910:156142-156439 - AAAACTAA------CATTATTTGTAGCCGGTTTTT-------------A-------------------------TGAGGTTTTTGTTTCCTATGCTAGCTTTTTTATTGACTCCTTATTAGCTCC-------------------------TAATA-T-TTTCTCTGTGCATCGCAAA-CCA-----AAATAATAGTGCCCTGTAAGGTTGGTGATGTGACTGTGATTGCT-----------ATTTTGTGACCG--AGCCA-------GT--GACTTTTACTGCGACTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTTTAATAGAATT-AAACGAGATGGACTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGT---GCCACACG-----A---------A----------------------CAAAA
droEle1 scf7180000491201:1799672-1799930 + ACAATTTCTTTTC-CT-----------------------TATT-----ATGTTTATTTT--------TAATATATATGATAATTTATTTCGATAG-------------------------------------------------------TAATGTT-TTTCTCTGTGCATTAAAAG-GCA-----AAATAAAAGAGCTCTATAAGTTCTCTGCTGTGACTGTGATTGAA-----------AAT-A--------GTGACT-------GT--GACTTTTACTGCG------TCTTCAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAAAAAGATGGACTTTT-CGAAA-TAAAAGCG------ACA-AAGCA--------------GCGCCTGAATT-GTGA-TTGT---GCCACA----------------------------------------CTAAA
droRho1 scf7180000780066:292402-292684 - ATAATTCA------------------ACGATTTTTAAAAAAAT-----ATAATGTTTGTTTTGCGTTCAACAAATATGATAATCCATTTTGATAA-------------------------------------------------------TATGGAT-GAGCTCTGTGCATCAAAAC-AAA-----AAATAAAAGTGCTCTATAATAGCTGCGCTGTGACTGCGATTGAA-----------ATTTAGTGACTG--AGTCT-------GT--GACTTTTACTGCG------TCTTCAAAGCTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAAAACGATGGACTTCT-GGAAA-TAAAAGCG---ACGACC-AAGCT--------------GCGCCTGAATT-GTGA-TTGT---GCCACA----------------------------------------CAAAA
droFic1 scf7180000454039:641346-641593 + ATATCTTTTTTAAACT-----------------------AAAT-----AATT-ACTT--------------------------------GAATTA-------------------------------------------------------CATGATT-TTA--GTGTGAATCACC-----AAACTGATATAATTGTGCTCTGTAAGATCTGCGCTGTGACTGTGACTGCA-----------ATTTAGTGACTA--AGCTT-------GT--GATTTTTACTGCGACGGCGTCTTTAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAACAAGATGGATTTTT-CGAAA-TAAAAGCG------ACAAAAGCT--------------TCGCCAGAATT-GGGA-TTGT---GCCACA----------------------------------------CAAAA
droKik1 scf7180000302471:1610611-1610787 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACTGTGATTG-------------------TGACTG--AGCCA-------GT--GACTTTTACTGCGACTGAGTCTTCAATGTTCGCT---------------CAT-TGTG---------TTCTAATAGAATT-TAACAAGATGGACTTTT-TGGAA-TAAAAGCA------ACA-AAGCT--------------GTGCCTGAATT-GTGA-TTGT---TCCATCAA-----ACAA------ACACACCAACTAAAGCAAGCCTCACCGA
droAna3 scaffold_13266:9929283-9929364 - GCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---------------CTT-TGTG---------CTCTAATAGAATT-AAACA---------------------------------ACA-AAGCTAGTGTATAGTGAGTGCCCCTAAATT-GTGAATTGT---GC---------------------T----------------------CGGGA
droBip1 scf7180000396427:1071336-1071458 - GAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTT-------GC--GACTTG------GATTGCGTCTTCAATGTTCTCC-TCCCTCCCTCCCTCCAT-TGTG---------CTCTAATAGAATT-CAACAAGATGGACTTT---------------------------AGTA------------GTGCCCCTAAATT-GTGA-TTGT---GCCTCGGA-----CT------------------------------------
dp5 3:6502867-6503095 - ATTATTT------------------------------------------------------TGCT----------GTGACTAT-------------AGCT-------------------------GTTACTGGTTACTGTGACTGTGACT-----------------------------------------------------------------------------GTG-----------AAT--GGGAATG--AGACT-------AC--GACTGGAACTGAGACT--CGCTTCAATTCTCATT---------------TATTTGTGCTGTTAATCCTCTAATAGAATTTAAACAAGATGAACTTTT-GAAAAGTCGCAGCG------ACA-AAGCT--------------ACGACCGCCTC-GTGA-TTGT---GCCATACC---------GACGAA-CAAATTTA-TCATACAATACAATACAA
droPer2 scaffold_2:6722462-6722690 - ATTATTT------------------------------------------------------TGCT----------GTGACTAT-------------AGCT-------------------------GTTACTGGTTACTGTGACTGTGACT-----------------------------------------------------------------------------GTG-----------AAT--GGGAATG--AGACT-------AC--GACTGGAACTGAGACT--CGCTTCAATTCTCATT---------------TATTTGTGCTGTTAATCCTCTAATAGAATTTAAACAAGATGAACTTTT-GAAAAGTCGCAGCG------ACA-AAGCT--------------ACGACCGCCTC-GTGA-TTGT---GCCATACC---------GACGAA-CAAATTTA-TCATACAATACAATACAA
droWil2 scf2_1100000004514:1317321-1317487 + GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGGGGCTTGAGAGGC-TCTGCTGGGGCTTTTGCTTCAATTTTCA-TCATTTGTTGTGCCT-GTT-AATT---------CTCTAATAGAATT-AAACAAGTTAAGCTCTC---AAA-TAAAAGCAAACACGACA-AAGCG--------------TCGCCTGAATT-GTGA-TTGT---GCCCCACACACACAGAC------A----------------------CAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATAGCTTCTTTAA-CT-----------------------GGAT-----AAGCGGCTTGC-----------TAAATAGGCCCATCAGTTCTTATGA-------------------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................TAGTGACCGAGAGACT-------GT--GAC.....................................................................................................................................................................................................................2112.00220000000000000000
.................................................................................................................................................................................................................................................ATTTAGTGACCGAGAGACT-------GT--........................................................................................................................................................................................................................2111.00101000000000000000
..................................................................................................................................................................................................................................................................................TTTTACTGCGATTGCTTCTCCAATGTT..........................................................................................................................................................................................2711.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................ATAGAATT-TAACAAGATGGTC...........................................................................................................................2111.00100010000000000000
......................................................................................................................................................................................................................................................GTGACCGAGAGACT-------GT--GACTTTT.................................................................................................................................................................................................................2311.00100100000000000000
......................................................................................................................................................................................................................................................GTGACCGAGAGACT-------GT--GACTT...................................................................................................................................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................................TTAGTGACCGAGAGACT-------GT--GA......................................................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................AGAGACT-------GT--GACTTTTACTG.............................................................................................................................................................................................................2011.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGAATT-GTGA-TTGTT.....................................................1911.00110000000000000000
...........................................................................................................................................................................................................................................................CGAGAGACT-------GT--GACTTTTAC...............................................................................................................................................................................................................2011.00110000000000000000
............................................................................................................................................................................................................................................................................T--GACTTTTACTGCGATTG.......................................................................................................................................................................................................1811.00100010000000000000
........................................................................................................................................................TTGTT-TTACTCTGTGCATTGCGA.......................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AGCA------ACA-AAGCT--------------GCGCCTGAATT-GT.............................................................2511.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTT.....................................................2811.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATT-GTGA-TTGTTGTGCCACAAA-----A.....................................2611.00100000001000000000
droSec2
ATAGCTTCTTTAA-CA-----------------------GGAT-----AAGCGGCTTGC-----------TAAATAGGCCTATCAGTTCTTATGA-------------------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCAAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAATT-GTGA-TTGTTGTGCCACAAA-----......................................2620.5010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-GTGA-TTGTTGTGCCACAAA-----......................................2220.5010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGAATT-GTGA-TTGTTGT...................................................2120.5010001
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCT--------------GCGCCTGAATT-GTGA-TTGTT.....................................................2420.5010010
.......................................................................................................................................................................................................................................................................................................................................................................................................A-AAGCT--------------GCGCCTGAATT-GTGA-TTGTT.....................................................2620.5010100
dm3
ATACCTTCTTTAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------TTAATGGACCTATCAGTTCTTATGA---TT--GT----------------------------------------------TATTGTT-TTACTCTGTGCATTGCGAATCCC-----AATTATTTGTGCTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCCACAAA-----ATAC------A----------------------CAAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................TG---------CTCTAATAGAATT-TAACAAGATGGTC...........................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATT-GTGA-TTGTTGTGCCACAAA-----ATA...................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........AA-CT-----------------------GAAT-----AAGCGGCTTGC-----------TT...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CT--------------GCGCCTGAATT-GTGA-TTGTTGTGC.................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000
................................................................................................................................................................................................................................TTTGCA-----------ATTTAGTGACCGAGAGA.....................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TCTAATAGAATT-TAACAAGATGGTC...........................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTCTTTAA-CT-----------------------GAAT-----AAGCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAGACT-------GT--GACTTTTACTGC............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000
.......................................................TTGC-----------TTAATGGACCTATCAGT................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------GCGCCTGAATT-GTGA-TTGTTGTGCC................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................GAGACT-------GT--GACTTTTACTGCGATTGCTT....................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GA---TT--GT----------------------------------------------TATTGTT-TTACTCT..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GC.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------T................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GACCGAGAGACT-------GT--GACTTTTACTGC............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................TGTG---------CTCTAATAGAATT-TAACAAGATGG.............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATTTGTGCTCAGTAAGATTG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTTTACTGCGATTGCTTCTCC................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................AGATTGGCACGGTGAATGTGTTTGC..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................TAAGATTGGCACGGTGAATGT........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GCG------ACA-AAGCT--------------GCGCCTGAATT-GTGA-T.........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACCGAGAGACT-------GT--GACTTTTACTGCGA..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAGACT-------GT--GACTTTTACTGCGA..........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTCTTTAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................TGCGATTGCTTCTCCAATGTTCACT---------------CAT-...................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TCAGTAAGATTGGCACGGTGA............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAGCT--------------GCGCCTGAATT-GTGA-T.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................T-----AAGCGGCTTGC-----------TTAATGGACCTATCAGT................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TACTGCGATTGCTTCTCCAATGTTC.........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGCA-----------ATTTAGTGACCGAGAGACT-------GT--GA......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GATTGGCACGGTGAATGTGTTTG...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGCA-----------ATTTAGTGACCGAGAGACT-------GT--GAC.....................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGAATT-GTGA-TTGTTG....................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................T--GACTTTTACTGCGATTGCTTCTCCAA..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGCT--------------GCGCCTGAATT-GTGA-TTGTT.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................TGTTTGCA-----------ATTTAGTGACCGAGAGAC....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................TATCAGTTCTTATGA---TT--GT----------------------------------------------TATTGT...........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATTTGTGCTCAGTAAGATTGGC...................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................TCAGTAAGATTGGCACGGTGAATG.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................A-----------ATTTAGTGACCGAGAGACT-------............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AGTGACCGAGAGACT-------GT--GACTTTT.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................AT-----AAGCGGCTTGC-----------TTAATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................CTTATGA---TT--GT----------------------------------------------TATTGTT-TTACTCTGTGC..............................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTTGCA-----------ATTTAGTGACCGAGAG......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................ATGTGTTTGCA-----------ATTTAGTGA.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGCTCAGTAAGATTGGCACGGTGAA...........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................TTTACTGCGATTGCTTCTCCAATGT...........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AATAGAATT-TAACAAGATGG.............................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTCACT---------------CAT-TGTG---------CTCTAATAGAATT-........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGAATT-GTGA-TTGTTGTGCCACAAA-----......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................T--------------GCGCCTGAATT-GTGA-TTGTTGTGCCC...............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GC.........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAATT-GTGA-TTGTTGTG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTTTAA-CT-----------------------GAAT-----AAGCGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CTGTGCATTGCGAATCCC-----A............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAG.................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GTGA-TTGTTGTGCCACAAA-----......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ACA-AAGCT--------------GCGCCTGAATT-G..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGCA-----------ATTTAGTGACCGAGAGACT-------GT--G.......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................TCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GC.........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CTTCTTTAA-CT-----------------------GAAT-----AAGCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TAGTGACCGAGAGACT-------GT--GACTTT..................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................T-TGTG---------CTCTAATAGAATT-TAAC....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TACTCTGTGCATTGCGAATCCC-----A............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................AGAATT-TAACAAGATGGTCTTTT-CG....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------GCGCCTGAATT-GTGA-TTGTTGTGC.................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTGA-TTGTTGTGCCACAAA-----......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGTAAGATTGGCACGGTGA............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................GGTCTTTT-CGAAA-TAAAAGC.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTGTT-TTACTCTGTGCATTGCGAA......................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ATTGGCACGGTGAATGTGTTTGC..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AGTGACCGAGAGACT-------GT--GA......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................CT-------GT--GACTTTTACTGCGATTG.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................ATTGGCACGGTGAATGTGT......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ATT-TAACAAGATGGTCTTTT-......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAGAATT-TAACAAGATGGTCTTTT-C.....................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------GCGCCTGAATT-GTGA-T.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTG---------CTCTAATAGAATT-TAACAAGATGG.............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCTTTAA-CT-----------------------GAAT-----AAGCGGCTTGC-----------TTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TAGAATT-TAACAAGATGGTC...........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GGTGAATGTGTTTGCA-----------ATTTAGTGACC...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................A-AAGCT--------------GCGCCTGAATT-GTG............................................................2011.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTAGTGACCGAGAGACT-------GT--G.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCT--------------GCGCCTGAATT-GTGA-TTG.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................TCTTATGA---TT--GT----------------------------------------------TATTGTT-TTACTCTGT................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------GCGCCTGAATT-GTGA-TTG.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................TAAGATTGGCACGGTGAATGTGTT.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................GTAAGATTGGCACGGTGAATGTGT......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................T-------GT--GACTTTTACTGCGATTGC......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................TTTACTGCGATTGCTTCTCCAATGTTC.........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTGCA-----------ATTTAGTGACCGAGAG......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAGACT-------GT--GACTTTTACTGCATC.........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTGGCAATTTTAA-CT-----------------------GGCT-----AAGCGGCTTGC-----------TTAATGGGACTATCAATTCTTATGA-------------------------------------------------------TATTGTTTTTACTCTGCACATTGCGAATCCC-----AATTATTTTTACTCAGTAAGATTGGCACGGTGAATGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTC-CT---------------CAT-TGTG---------TTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCAGAATT-GTGA-TTGCTGTGCCACAAA-----ATAC------A----------------------CAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................CG------ACA-AAGCT--------------GCGCCAGAA..................................................................1911.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAATT-GTGA-TTGCTGTGCCACAAA-----......................................2611.0010000100
..................................................................................................................................................................................................................................................................................................................................................................CAAGATGGTCTTTT-CGAA..................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................ATT-TAACAAGATGGTCTTTT-CGAAA-TA..............................................................................................................2711.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------GCGCCAGAATT-GTGA-TTGCT.....................................................2311.0011000000
droYak3
ATACCTAATTTAA-CT-----------------------GGTT-----AAGCGGCTTGC-----------TAAATGGGACTATCAATTCTTATGA-------------------------------------------------------TATTGTTTTTACTCTGTGCATTGCGAATCCA-----AATTATTTTTGCCGAGTAAAAT------------TGTGTTTGCA-----------ATTTAGTGACCGAGAGACT-------GT--GACTTTTACTGCGATTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATT-TAACAAGATGGTCTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GTGCCTGAATT-GTGA-TTGCTGTGCCACAAA-----ATAC------A----------------------CAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................TATTTTTGCCGAGTAAAAT------------TGTGT......................................................................................................................................................................................................................................................................2411.00100000010000
............A-CT-----------------------GGTT-----AAGCGGCTTGC-----------TAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..............CT-----------------------GGTT-----AAGCGGCTTGC-----------TAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGAATT-GTGA-TTGCTGTGCCA...............................................2411.00101000000000
.................................................................................................................................................................................................................................................ATTTAGTGACCGAGAGACT-------GT--........................................................................................................................................................................................................................2111.00110000000000
.......................................................................................................................................................ATTGTTTTTACTCTGTGCATTGC.........................................................................................................................................................................................................................................................................................................................2311.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................G------ACA-AAGCT--------------GTGCCTGAATT-G..............................................................2111.00101000000000
.................................................................................................................................................................................................................................................ATTTAGTGACCGAGAGACT-------GT--GACTT...................................................................................................................................................................................................................2611.00110000000000
......................................................................................................................................................TATTGTTTTTACTCTGTGCATTGC.........................................................................................................................................................................................................................................................................................................................2411.00100010000000
..........................................................................................................................................................GTTTTTACTCTGTGCATT...........................................................................................................................................................................................................................................................................................................................1811.00110000000000
droEug1
TCTT------TCC-AT------ATAAACGTTTTTCACGGGAGTTTTTGA----------------------------------------TGATGA-------------------------------------------------------TATTGTT-TAGCTCTGTGCATCACGAA-CTA-----AAA-------------TAAGATTGTGGCCGTGACTGTGACTGTAATTGCAGTGTGATTTCGTGACTGAGAGCCT-------GT--GACTTTTACTGCGACTGTTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTCTAATAGAATTTTAACAAGATGGACTTTT-CGGAA-TAAAAGCA------ACA-AAGCT--------------GCGCCTGAATTTGTGA-TTGT---GCCACACA-----CA--------A----------------------CAAAASizeHit CountTotal NormTotal
No Reads
droBia1
TTAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTGAATCATCTA-CCA-----AAATATTTGTGCTCTGTAAGAATGCGGCTGCGACTGTGATTGC---------------TAGTGACTT--AGCCA-------GT--GACTTGGGCTGCGACTGCTTCTCCAATGTTCCCT---------------GAT-TGTGCTGA----GCTCTAATAGAACT-AAACAAGACGGACTTTTTCGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCCGAATT-GTGA-TTGT---GCCACCCA--------C------G----------------------CAAAGSizeHit CountTotal NormTotal
No Reads
droTak1
AAAACTAA------CATTATTTGTAGCCGGTTTTT-------------A-------------------------TGAGGTTTTTGTTTCCTATGCTAGCTTTTTTATTGACTCCTTATTAGCTCC-------------------------TAATA-T-TTTCTCTGTGCATCGCAAA-CCA-----AAATAATAGTGCCCTGTAAGGTTGGTGATGTGACTGTGATTGCT-----------ATTTTGTGACCG--AGCCA-------GT--GACTTTTACTGCGACTGCTTCTCCAATGTTCCCT---------------CAT-TGTG---------CTTTAATAGAATT-AAACGAGATGGACTTTT-CGAAA-TAAAAGCG------ACA-AAGCT--------------GCGCCTGAATT-GTGA-TTGT---GCCACACG-----A---------A----------------------CAAAASizeHit CountTotal NormTotal
No Reads
droEle1
ACAATTTCTTTTC-CT-----------------------TATT-----ATGTTTATTTT--------TAATATATATGATAATTTATTTCGATAG-------------------------------------------------------TAATGTT-TTTCTCTGTGCATTAAAAG-GCA-----AAATAAAAGAGCTCTATAAGTTCTCTGCTGTGACTGTGATTGAA-----------AAT-A--------GTGACT-------GT--GACTTTTACTGCG------TCTTCAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAAAAAGATGGACTTTT-CGAAA-TAAAAGCG------ACA-AAGCA--------------GCGCCTGAATT-GTGA-TTGT---GCCACA----------------------------------------CTAAASizeHit CountTotal NormTotal
No Reads
droRho1
ATAATTCA------------------ACGATTTTTAAAAAAAT-----ATAATGTTTGTTTTGCGTTCAACAAATATGATAATCCATTTTGATAA-------------------------------------------------------TATGGAT-GAGCTCTGTGCATCAAAAC-AAA-----AAATAAAAGTGCTCTATAATAGCTGCGCTGTGACTGCGATTGAA-----------ATTTAGTGACTG--AGTCT-------GT--GACTTTTACTGCG------TCTTCAAAGCTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAAAACGATGGACTTCT-GGAAA-TAAAAGCG---ACGACC-AAGCT--------------GCGCCTGAATT-GTGA-TTGT---GCCACA----------------------------------------CAAAASizeHit CountTotal NormTotal
No Reads
droFic1
ATATCTTTTTTAAACT-----------------------AAAT-----AATT-ACTT--------------------------------GAATTA-------------------------------------------------------CATGATT-TTA--GTGTGAATCACC-----AAACTGATATAATTGTGCTCTGTAAGATCTGCGCTGTGACTGTGACTGCA-----------ATTTAGTGACTA--AGCTT-------GT--GATTTTTACTGCGACGGCGTCTTTAATGTTCACT---------------CAT-TGTG---------CTCTAATAGAATT-AAACAAGATGGATTTTT-CGAAA-TAAAAGCG------ACAAAAGCT--------------TCGCCAGAATT-GGGA-TTGT---GCCACA----------------------------------------CAAAASizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACTGTGATTG-------------------TGACTG--AGCCA-------GT--GACTTTTACTGCGACTGAGTCTTCAATGTTCGCT---------------CAT-TGTG---------TTCTAATAGAATT-TAACAAGATGGACTTTT-TGGAA-TAAAAGCA------ACA-AAGCT--------------GTGCCTGAATT-GTGA-TTGT---TCCATCAA-----ACAA------ACACACCAACTAAAGCAAGCCTCACCGASizeHit CountTotal NormTotal
No Reads
droAna3
GCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---------------CTT-TGTG---------CTCTAATAGAATT-AAACA---------------------------------ACA-AAGCTAGTGTATAGTGAGTGCCCCTAAATT-GTGAATTGT---GC---------------------T----------------------CGGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................AATAGAATT-AAACA---------------------------------ACA-AAGCTAGT......................................................................................2511.001010000
GCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---------------CTT-TGTG---------CTCTAATAGA............................................................................................................................................2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................CTAGTGTATAGTGAGTGCCCCC.....................................................................2211.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAATT-GTGAATTGT---GC---------------------T----------------------CGG..2211.001010000
GCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCT---------------CTT-TGTG---------CTCT..................................................................................................................................................1811.001010000
droBip1
GAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTT-------GC--GACTTG------GATTGCGTCTTCAATGTTCTCC-TCCCTCCCTCCCTCCAT-TGTG---------CTCTAATAGAATT-CAACAAGATGGACTTT---------------------------AGTA------------GTGCCCCTAAATT-GTGA-TTGT---GCCTCGGA-----CT------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ATTATTT------------------------------------------------------TGCT----------GTGACTAT-------------AGCT-------------------------GTTACTGGTTACTGTGACTGTGACT-----------------------------------------------------------------------------GTG-----------AAT--GGGAATG--AGACT-------AC--GACTGGAACTGAGACT--CGCTTCAATTCTCATT---------------TATTTGTGCTGTTAATCCTCTAATAGAATTTAAACAAGATGAACTTTT-GAAAAGTCGCAGCG------ACA-AAGCT--------------ACGACCGCCTC-GTGA-TTGT---GCCATACC---------GACGAA-CAAATTTA-TCATACAATACAATACAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................ATG--AGACT-------AC--GACTGGAACTGAGA..........................................................................................................................................................................................................2412.0020000000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCTC-GTGA-TTGT---GCC................................................1911.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTC-GTGA-TTGT---GCCATACC---------G.................................2311.0011000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCT--------------ACGACCGCCTC-GTGA-TT........................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GAACTTTT-GAAAAGTCGCAGC.........................................................................................................2111.0010100000000
droPer2
ATTATTT------------------------------------------------------TGCT----------GTGACTAT-------------AGCT-------------------------GTTACTGGTTACTGTGACTGTGACT-----------------------------------------------------------------------------GTG-----------AAT--GGGAATG--AGACT-------AC--GACTGGAACTGAGACT--CGCTTCAATTCTCATT---------------TATTTGTGCTGTTAATCCTCTAATAGAATTTAAACAAGATGAACTTTT-GAAAAGTCGCAGCG------ACA-AAGCT--------------ACGACCGCCTC-GTGA-TTGT---GCCATACC---------GACGAA-CAAATTTA-TCATACAATACAATACAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................GTG-----------AAT--GGGAATG--AGACT-------............................................................................................................................................................................................................................1811.001010000
................................................................................................................................................................................................................................................................................................................................................................AACAAGATGAACTTTT-GAAAAGTCGC............................................................................................................2611.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTC-GTGA-TTGT---GCC................................................1811.001100000
droWil2
GA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTGGGGCTTGAGAGGC-TCTGCTGGGGCTTTTGCTTCAATTTTCA-TCATTTGTTGTGCCT-GTT-AATT---------CTCTAATAGAATT-AAACAAGTTAAGCTCTC---AAA-TAAAAGCAAACACGACA-AAGCG--------------TCGCCTGAATT-GTGA-TTGT---GCCCCACACACACAGAC------A----------------------CAAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................TTGAGAGGC-TCTGCTGGGGC.........................................................................................................................................................................................................2011.00100100
................................................................................................................................................................................................................................................................................................................................................................AACAAGTTAAGCTCTC---AAA-TA..............................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................GACA-AAGCG--------------TCGCCTGAATT-GTGA-TTGT---...................................................2811.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................GACA-AAGCG--------------TCGCCTGAATT-GT.............................................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................CGACA-AAGCG--------------TCGCCTGAATT-GTGA-TT........................................................2711.00100100
......................................................................................................................................................................................................................................................................................................CAATTTTCA-TCATTTGTTGT............................................................................................................................................................................2011.00100100

Generated: 05/18/2015 at 08:03 PM