ID:

dsi_14339

 Coordinate:

2l:12889971-12890232 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_12890233_12891005_+]; CDS [2l_12890233_12891005_+]; exon [2l_12889194_12889970_+]; CDS [2l_12889194_12889970_+]; intron [2l_12889971_12890232_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACCTGCTGCGAATGGAGGATATAGCAGCACCACAGCCGATGCCGTTGATGGTGAGCAGAGCCCCCAAGGATTGGGCTCGCTTTACTTTTTGGGTGATTTTGGTTCAGCTACTGATCCCGATACGACTCATCACACATCGCCAGCTCTTACTAAGCGGTTGAGGTTGCTTCTTCTAAAAGCCCCATTCGACTAACCAGACATCCAAAAGGCCTTACAAATTGGCTCACAATCCTCCCACTAACAGCACTAATAAACTGATGCAATTTAAAGAAAGTTATGGCTAACAAATTCCATTTCTTTTGTTCAATATAGGTCCAAGACCATCGGCGGCTAGCGTTGAAAGCAGCTACAGTCCTTACACA
**************************************************((((((.((((((.........))))))......(((((((((((..(((((((.((((..((((...(((.......)))....))))..))))..........(((((((...((((.......))))....)))))))))))))))))))))))))............))))))................(((.((......)).)))........(((((..((((..........))))..)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR902009
testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................................................................................................................................................................................................................GTCCAAGACCATCGGCGGCT.............................. 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.........GAATGGAGGATATAGCAGCACCACAGC...................................................................................................................................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..........................GCACCACAGCCGATGCCGTTGATG........................................................................................................................................................................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........GAATGGAGGATATAGCAGCAC............................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
......................AGCAGCACCACAGCCGATGCCGTTGAT......................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................CCAAGACCATCGGCGGCTAGC........................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................GCACCACAGCCGATGCCGTTGAT......................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................GTCCAAGACAATCGGCGGCTAGCGT......................... 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........AATGGAGGATATAGCAGCACCACAGCC..................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................AGAGCTCCCAAGGGTTCGGCT............................................................................................................................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................CTAAGGGTTGGGCTCGC.......................................................................................................................................................................................................................................................................................... 17 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................TGTTTTTGTTTCAGCTACTGCTC...................................................................................................................................................................................................................................................... 23 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................TTCCCTATCTTTTGTTAAATAT.................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................AGCTTGCTCCTTCTAAAA........................................................................................................................................................................................ 18 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
..............................................................CCCAAGGGTTGGGCT............................................................................................................................................................................................................................................................................................. 15 1 11 0.18 2 0 0 0 0 0 0 2 0 0 0 0
......................................................................................................................................................................CTTCTTTTAAAAGCTCCA.................................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................................................................................................GTTCAAGATCATCGGCGG................................ 18 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................GCTTGACTTTTTGGGT............................................................................................................................................................................................................................................................................ 16 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................GCTCACAATTCTCCC.............................................................................................................................. 15 1 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................AAAGGAAGTTCGGGCTAAC............................................................................. 19 3 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................TGAGACCGATACGACT........................................................................................................................................................................................................................................... 16 2 19 0.05 1 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................CTAACAAATCCGATGTCTTT.............................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
........................................................GGAGCGCCCGAGGATTGG................................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................TGATTGTGGTTCAGC.............................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................CTAAGCGGTGGAGATT..................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TGGACGACGCTTACCTCCTATATCGTCGTGGTGTCGGCTACGGCAACTACCACTCGTCTCGGGGGTTCCTAACCCGAGCGAAATGAAAAACCCACTAAAACCAAGTCGATGACTAGGGCTATGCTGAGTAGTGTGTAGCGGTCGAGAATGATTCGCCAACTCCAACGAAGAAGATTTTCGGGGTAAGCTGATTGGTCTGTAGGTTTTCCGGAATGTTTAACCGAGTGTTAGGAGGGTGATTGTCGTGATTATTTGACTACGTTAAATTTCTTTCAATACCGATTGTTTAAGGTAAAGAAAACAAGTTATATCCAGGTTCTGGTAGCCGCCGATCGCAACTTTCGTCGATGTCAGGAATGTGT
**************************************************((((((.((((((.........))))))......(((((((((((..(((((((.((((..((((...(((.......)))....))))..))))..........(((((((...((((.......))))....)))))))))))))))))))))))))............))))))................(((.((......)).)))........(((((..((((..........))))..)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 GSM343915
embryo
 SRR902009
testis
...........................................................................................................................CCAAGTAGTGCGTAGCGGTC........................................................................................................................................................................................................................... 20 3 6 1.33 8 7 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................AGGGATAGAAAACAATTTATA.................................................... 21 3 12 1.00 12 0 2 2 8 0 0 0 0 0
.........................................................................................................TCGATGACTAGGGCCGTGGTGA........................................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................AGTAGTGCGTAGCGGTC........................................................................................................................................................................................................................... 17 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................AGTCGATGAATAGGGCTATGGT............................................................................................................................................................................................................................................. 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................TGGGTGATTGTCGTGATC................................................................................................................ 18 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................GAGTAGGGTGTCGCGGTCG.......................................................................................................................................................................................................................... 19 2 9 0.44 4 3 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................CTGGTAGCCGCCAATCGTA......................... 19 2 3 0.33 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................GTAGTGCGTAGCGGTCAA......................................................................................................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................CCAATTGTTTAAGGTAA................................................................... 17 1 4 0.25 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................GAGTAGCGTGTCGCGGTC........................................................................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................AGTAGTGCGTAGCGGTCA.......................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................GCGGAGAGGTCTGTAGGTTT............................................................................................................................................................ 20 3 5 0.20 1 0 0 0 1 0 0 0 0 0
............................................................................................................................TGAGTAGGGTGTCGCGGTC........................................................................................................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CGTCGATCTCAGGAATATTT 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0
............................................................................................................................CAAGTAGTGCGTAGCGGTC........................................................................................................................................................................................................................... 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................GTAGCGCGTAGCGGTCAAGA....................................................................................................................................................................................................................... 20 3 7 0.14 1 0 1 0 0 0 0 0 0 0
................................................................................................................................TAGTGCGTAGCGGTCAAGAC...................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................CCAAGTAGTGCGTAGCGGT............................................................................................................................................................................................................................ 19 3 15 0.13 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................GAGTAGGGCGTAGCGGTC........................................................................................................................................................................................................................... 18 2 16 0.13 2 0 0 0 0 0 0 2 0 0
...........................................................................................................................................................................................................................................................................................................................................................GTGTCAGGAATGTGT 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................GAGCATGATTCGCCAT........................................................................................................................................................................................................... 16 2 9 0.11 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................AAGGGATAGAAAACAATTTAT..................................................... 21 3 10 0.10 1 0 0 0 0 0 0 0 0 1
............................................................................................................................................GGAGAGCATGATTCGCCA............................................................................................................................................................................................................ 18 3 12 0.08 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................AGTGCGTAGCGGTCAAG........................................................................................................................................................................................................................ 17 2 13 0.08 1 0 0 1 0 0 0 0 0 0
......................................................................................................AAGTCGATGACTAGTG.................................................................................................................................................................................................................................................... 16 1 16 0.06 1 0 0 0 0 1 0 0 0 0
.................................................................................................AAGCCTGGTCGATGACTAG...................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:12889921-12890282 + dsi_14339 ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TGGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-GCCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGCAA-------TTTAAAGA------------------------AAGTTA------------TGGCTAA-----CAAATT----------C------------------------------------------------------------------------CATT--------------------------------TCT--TTTGTTCAATATAGGTCCAAGACCATC-------GGCGGCT---AGCGT-TGAAAG---------------------------CAGCTACAGTCCTTACACA
droSec2 scaffold_16:1431136-1431498 + TCCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------A-TTGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAT-GCCCCATTTGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGCAG-------TTTAAAGA------------------------AAGTTA------------TGGCTAA-----CAAATT----------C------------------------------------------------------------------------CATT--------------------------------TCT--TTTGTTCAATATAGGTCCAAGACCATC-------AGCGGCT---AGGAATCCAAAG---------------------------CAGCTACAGTCCTTACACG
dm3 chr2L:13271923-13272283 + ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACATCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCT--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTTTAAAA-GCCCCATTCGACTAATC--A---AACATCCAAAAGGCCC---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGTAA-------TTTAAACT------------------------TTC-TT------------TGGCTAA-----AAAATT----------C------------------------------------------------------------------------TATT--------------------------------TAT--TTTGTTTAATATAGGTCCAAGACCATC-------GGCGGCT---AGCGT-TGAAAG---------------------------CAGCTACAGTCCTTACACT
droEre2 scaffold_4929:12169260-12169620 - AACTGGCGC-------------------------------------------------------------------------GAATGAAGGATATAGCAGCAC---T---------------------------------ACATCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCCT-TACTTT---TTGGGT--GG--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTGCTAAAAGAACCCATTCGACTAACC--A---GTCATCCAAAAGGCCC---TACAAA---TTGGCT--CACAA-T-CCCCCACTAACAGCACTAATAAA--CT-G------ATGA-A-------TTTGAAGA------------------------AAGTGG------------TGGCTAA-----CGAACT----------A------------------------------------------------------------------------TTTT--------------------------------TCC--TCTGTTAAATATAGGTCCCAGACCATC-------GGCAGCT---AGCGT-GGAAAG---------------------------CAGCTATAGTCCTTACACG
droYak3 2L:9709455-9709825 + AACTGGCGC-------------------------------------------------------------------------GAATGGAGGATTTAGCAGCGCACAG---------------------------------ACATCC---GATGCAGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT---TTGGGT--GG--TTTTGGTTCTGG-T---------------------------------------------------TCTGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-GCCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TAGGCT--TACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATCAAA-------TTTAAACG------------------------GACTTT------------CGGTTAA-----CGAATT----------A------------------------------------------------------------------------TATT--------------------------------TCT--TTTGTTAAATTTAGGCCCAAGACCATC-------TGCAGCT---AGCGT-TGAAAG---------------------------CAGCTATAGTCCTTACACA
droEug1 scf7180000409554:128726-129090 - CGCTGGCCA-------------------------------------------------------------------------GAATGAAGGATGCAGCAACACCGCC---------------------------------ACAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCCGC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GT--TATT------GG-T---------------------------------------------------TCTGCTACTGATCC-CGATA-----CGA------A--------TCATCATAAATCGA-CAGCTC-T-TACTAAGCGGTTAAGGTT-----GCTTCTTCTAAAA-ACCCCATTCGACTAATC--A---GACATCCAAAAGGCCT---TATAAA---TTGGCT--GACAA-ACCTCCCACTAACTGCACTAAAATA--ATTG------A-GGAC-------TTTAGAGT------------------------GAATTA------------AGGTTAA-----TTAATG----------C------------------------------------------------------------------------TGTT--------------------------------TTTT-CTTTTGTAATTAAGGTCCAAAACCATC-------AGCAGCC---AGCGT-GGAAAG---------------------------TAGCTATACTCCCTACACA
droBia1 scf7180000302408:3092270-3092621 - AGCTGGCCA-------------------------------------------------------------------------GAATGGAGGATACTCC-GC-----T---------------------------------CCAGCCGTTGACGCCGTTGATGGTGA--GC----AGAGCCC-C--------GAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT---T--TTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATA-----CGA------C---TCA--TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAC-ACCCCATTCGACTAACT--A---GACATTCAAAAGGCCT---TATAAA---TTGGCT--G-------CTCCCACTAACTGCACTAAAATA--AT-T------ATGG---------TATGCGGA------------------------AGGATA-------------GGAAAG-----TAATTT----------A------------------------------------------------------------------------AACT------------------------------T-T----CTTTACAAATGTAGGTCCAAAACCATC-------GGCCGTC---GGCTT-GGAGAG---------------------------CAGCTACAGCCCCTACACA
droTak1 scf7180000415287:238788-239183 + AGCCGG----------------------------------------------AAATGGGAATGGAAATGGAAATGGTGGCCAGAATGGAGGATACTCCAG---------------------------------------CCCAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCCCCGCCCCCAAGAGGA------------------------------------G-TTGGCTCGCTT-TACTTT----TGGGT--GT--TTTT----ATGG-T---------------------------------------------------TCCGCTACTGATCC-TGAT------CGA------C--------TCATCATACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-ACCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TAGGCCATGA-AA-AACTCCCACTAACTGCACTAAAATA--AT-A------ATGGGA-------TTTAAAGT-GA---G---TTC---------------CA------------TG--AAA-----GTAATT----------A------------------------------------------------------------------------AATT------------------------------T-TCC--TTTCACAAATGTAGGTCCAAGACCATC-------GGCAGCC---AGCGT-GGACAG---------------------------CAGCTATAGTCCCTACATA
droEle1 scf7180000491338:870916-871269 + AGCTGGAG----------------------------------------------------------------------GCCAGAATGGAG------------------------------------------------------CA---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GTTTTTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATTCGATACAATACCGAC---TC---TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-CCCCCATTCGACTAACCC-T---GACATCCA-AAGGCCC---TACAAA---TGGGCC--GGCAA-ACCTTCCACTAACTGCACTAAAATATATT-T------TTGGA--------TATATAAA--------------AA--------GAAATA------------TTGTTAG-----TAAATA----------A------------------------------------------------------------------------CATA------------------------------TT-----TTTTTTAAATGTAGGTCCCAAACCATC-------GG------------T-GGAAAG---------------------------CAGTTATAGCCCCTATACA
droRho1 scf7180000767761:294-677 + AGCTGGTCA-------------------------------------------------------------------------GAATGGAGGATACAGCAACAG---CAACAGC---AAC------AGCAATACCCT---CCCAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCC-C--------GAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GT--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA---TACGA------T--------ACATCATACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTCTTAAAA-CCCCCATTCGACTAACC--A---GACATCCA-AAGGCCC---TACAAA---TTGGCT--GAGAA-TCCTCCCACTAACTGCACTAAAATA--TT-TAA------A----ATAA--ACTAGAGT------------------------AGAAAAAG------------GGAAT-----TTAAAT----------T------------------------------------------------------------------------TATT--------------------------------TATCCC-TTCTTAATATAGGTCCAAGACCGTC-------AGCAGCC---AGCGT-GGAAAG---------------------------CAGTTATAGCCCTTATACA
droFic1 scf7180000453925:730956-731340 - CGCCAATG-------------------------------GAG---GCCAGAACGATG---------------------GCCAGAACGGAGGATACAG------------------------------------------CCAGGCG---GATGTCGTTGATGGTGAGAGC----AGAGCATCC--------AAGGA------------------------------------T-TGGGCTCGCTT-TACTTT----TGGGT--GG--TTTC----ATGG-T---------------------------------------------------TCCGCTACTGATCC-CGAAACGATACGA---------------TCATCATGCATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-CCCCCATTCGACTAACC--ATTCGACATCGA-AAGGCCC---AACAAA---ATGGCT--AAGAA-ACCTCCCACTAACTGCACTAAAATA--TT-T------ATTT-A-------TTTAAAT------------ACTAC-GA-----AAGTGG------------TGACTA----------------------------------------------------------------------------------------TAATGAGTGTT--------------------------------T----CTTTTTAAATTTAGGTCCTAAGTCATC-------AGCAACT---AGTGT-GGAGAG---------------------------CAGCTATAGCCCCTACACA
droKik1 scf7180000302382:685982-686335 - CGCAGCAGC-------------------------------------------------------------------------GGCT------------------------------------------------------GCCCCA---GATGCCGTTGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------T-TTGGCTGGCTT-TACGTTTCGTTGGGT------TTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATA-----CGA------C--------TCACCACACATCGC-CAGCAA-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAA--CCCCCATTCAACTAACC--A---GACATCCACAAGGCCC---TACAAA---TTGGCAACAAAAA-TCCTCCAACTAACAGCACTAAATTT--AT-TA-----A-TAAA-------CTTA-AGT-------------T-TGGT--------CTG------------GGGACAC-----TTGATA----------A------------------------------------------------------------------------TAT---------------------------------TAT--TTTTTCAAATGTAGGTCCGAGGCCATC-------GGCAGCT---TCCGT-GGACAGCAACAGCA---ACA------ACTACAGCAGCAACAG--------CA
droAna3 scaffold_12943:1915855-1916270 + AGCTGCCCC---------CACTG-AGGGGTACACCAATGGGAACAGCAACAGCAATGGCAATGGCAATGGC---------------------AATAGCAGC------------------------------AGCAACAGCCCCTCA---GATGTTGTTGATGGTGA---------------------------GGA------------------------------------C-TTGGCTGGCATTTGCTTA---ATG-GT------TTTTGGTTTTGG-A---------------------------------------------------T---ATACTGATCC-CGATA-----CGA------C--------TCATGATACATCGC-CAGCAA-A-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA---CCCATTCCACTAATT--A---GACATCCA-AAGGCCT---CACAAA---TTGGCT--CACCA-A-TCCCCACTAACCGCACTAAAATAAAAT-----ATCAG----A-AAATC---------AATAAC-------ATGGCTTGGA-------G-----------------AAAAACTAATA----------A------------------------------------------------------------------------AATA--------------------------------TAT--TTTTTTAAATCTAGCTCCCCGGTCAGC-------ACCAGCTCCCAGTGT-GGAAAGTA---------ACA------ATGGCAATAGTTATATTCCATATACA
droBip1 scf7180000396728:1338958-1339362 - AGCTGCCCC---------AACTG-ACAGCT------------------ACGCCAATGGCAACAGCAACAGC---------------------------------------------AATGGCAACAGCAGCAGCAACACTCCCTCC---GATGTTGTTGATGGTGA---------------------------GGA------------------------------------C-TTGGCTGGCATTTCCTTA---AT-GGT------TTTTGGTTTTGG-A---------------------------------------------------T---ATACTGATCC-CGATA-----CGA------C--------TCATGATACATCGC-CAGCAA-A-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-A-CCCATTCCACTAATT--A---GACATCCA-AAGGCCC----ACAAA---TTGGCT--CACCA-ATCTCCCACTAACAGCACTAAAATA--AA-AAATATCAC----A-AAATC---------CATGAC-------ATGGC----A-------G-----------------GGAAGTTAATA----------A------------------------------------------------------------------------AATA------------------------------TTTTT--GTATTTAAATTCAGCTCCCAGATCAGC-------ACCAGCTCCCAGTGT-GGAAAGTA---------ACA------ATGGCAACAGCTATATCCCATACACA
dp5 4_group4:4057935-4058330 - ACCAGCCAC-----------------------------------------------CA------------------------AAATGGAGACTACAATGGCAG---CAACGGAAGCAAT------TA---------CAACAACTCA---GACGCTGTCGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------C-T-CGCTGGCTT-GATCAT----TGGGG------TTTT------GG-T---------------------------------------------------TCCGATACTGATTT-CGATA-----CTC------T--------TCATGACACCTCGC-CAGCAA-T-TACTAAGCGGTTACGGTT-----GCTTCTTCTAAA---CCACATTCAACTAACTCAA---GACATGGAAAAGGCCC---TACAAAAGCCTGGCT--C--AA-ACCTCCCACTAACTGCACTAAACGATTTT---A------T----TCAAGC---------AACAACGGTT--T--------------------------------------------------------------------------------------------------------------------------------------TCGTTTCAATGCGGTATCTAATGCAAATATT-----TTCTTCAAATGTAGGTCCAAAATCGTTTGACAACAGCAGC--------------------AACA---ACA------ACTGCAACAGCTATAGCCCCTACACA
droPer2 scaffold_10:3095105-3095503 - ACCACCAGC--------------------------------------------AACCA------------------------AAATGGAGACTACAATGGCAG---CAACGGAAGCAAT------TA---------CAACAACTCA---GATGCTGTCGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------C-T-CGCTGGCTT-GATCAT----TGGGG------TTTT------GG-T---------------------------------------------------TCCGATACTGATTT-CGATA-----CTC------T--------TCATGACACCTCGC-CAGCAA-T-TACTAAGCGGTTACGGTT-----GCTTCTTCTAAA---CCACATTCAACTAACTCAA---GACATGGAAAAGGCCC---TACAAAAGCCTGGCT--C--AA-ACCTCCCACTAACTGCACTAAACGATTTT---A------T----TCAAGC---------AACAACGGTT--T--------------------------------------------------------------------------------------------------------------------------------------TCGTTTCAATGCGGTATCTAATGCAAATATT-----TTCTTCAAATGTAGGTCCAAAATCGTTTGACAACAGCAGC--------------------AACA---ACA------ACTGCAACAGCTATAGCCCCTACACA
droWil2 scf2_1100000004521:5590699-5591069 - AGCAGTTGCAGCTGCTCCAATTACTCAGCC------------------AA----------------------------GTCAGAATGGAGACTATA------------------------------------------------CC---GATAGCGTTGATGGTGA--GCTTGTGGAGCT--A--------AAGGA------------------------------------A-TT---TTACTT-TATCAA---TTGGGT------TCTT------GG-T---------------------------------------------------TCACCT---AATCT-GGACA-----CTC------AGTCTCAATT--CCATCCATCGCCCAGCAA-T-TACTAAGCGGTTACGGTTTTACGGCTTTATCTAAA---TCACATTTAAC-------------------------CC---CATGAA---ATGGCT--AATTAATTTCCCCACTAAAACCACTAATAAA--AA-G------AATAAG-------CA----------------------------------AAAACAAGTTTAAAATTTTAAAAATTATTGCCAAAACTAATAATTAT--------------------------------------------------------------------TGTTTTTG-----------------------------------TTTCCAAT-TAGGCTATAAACCTCA-------AGCAATT---GGT----AATAG---------------------------CAACTATAGTCC-------
droVir3 scaffold_12723:3517592-3518060 - dvi_1509 CCAGAACGG-------------------------AAATGACG---ACTACAGCAACAGCAACAACAACAGC---------------------------------------------AAC------AGCAACAACAT---TAGCCAA---GATGCCGTTGATGGTGA--GC----AGTGAGA----------GAGAGAGAGAGAGAGAGAGAGAGACTTTGGATATCGCATCAT-TTCGCGGGCTT-TTGGTT------------------TGGTTTTGG-G---CACTCTAATATTTACACTGTC-----AGTGGGCCAAAGTTCTCTTGGTACAGTTCTTGGCCCTCGGCT-----CGC------C--------TCATG-CTCTTCGC-CGGCTAGT-TACTAAGCGGTTTCTGGT-----GCTT----TAA-A-ACGACATCTGACTAATCCCA---GACATCAA-GCGGCAT---TATCTA---TTGGC------AT-TCCCCCCACTAACGGCACTAAAACA-----G-A-TTCAC--AAT------TCCTCAAT------------------------CCTTTA------------CAATCCA-----CTAATCCCAGC-----TTGTTCGT----CTCTGCAGGGTACAAACCAACT--------------------------------------------------------------------------------------------------------GGC-------AACAGCTAC-----------------AACA---ACAGTAACGGCAACAACAGCTACAGCCCATACACA
droMoj3 scaffold_6500:6238973-6239495 + TCAGAACGG-------------------------------------------------------------------------CAATGGCGACTACAACAGCAG---CAACAGC---AATAACAACAACAACAACAGCAACAGCCAA---GATGCCGTAGATGGTGA--GC----AGAGCGA----------GAGAG--AGGGAGAGCGAGAAACTCTTCGGATATCTCATCAT-TTCGCTGGCTTTTAGTTA---TTGGTTTCGG--TTTTGGTTCTGGGT-CACACTCTAAC---CCCACTCTC----GAGTGGGCCAAAGTTCTCTTGGTACAGTTCTTGGCCCGCGGCT-----CGC------C--------TCATGTCG-CTCGC-CGGCTAAT-TACTAAGCGGTATCTGGT-----GCTT----TAAAA-ACCACATCTGACTAATCCCA---GACATCAA-GCGACATCTCTCTTTA---TTGG------CAA-T-TCCCCACTAACGGCACTAAACAC--AA-A---ATCAC----C------TTCTCTATCCTCCA------------CCTGCA-------G-----------------CAATTCTAATCCCAGT-----TT---CGTCTATTCCTGCAGCCTACAAGCCAGCTGGCAA------CAGCTACAGCAATGGTAACTACAACAAC--------------------------------------------------------AACAACAGCATT-------GGCAAC----AGC----------------------A------ACAGCAACAGTTACAGTCCCTATGCA
droGri2 scaffold_14978:147892-148392 - CCAAAATGC-------------------------CAATGGTG---ACTACGGCAATGGCAGCAGCAACAGC---------------------------------------------AAC------AACAACAACAT---CAGCCAA---GATGCCGTTGATGGTGA--GC----TC----TCC-------AGAGCA---------------TTGACTTTGGATATCGCATCATATTCGCTGGCTT-T----T----TGGTT---------TGGTTTTGGGTTCACTCTCTAAT---CCCACCGTCACAGAAGTGGGCCGAAGTTCTTTTGGTACAGTTCTTGGCCCTCCGCT-----CGC------C--------TCATGT-TGATCGC-CGGCTAATGTACTAAGCGGTTTCTGGT-----GCTT----TAA-A-ACGACATTTGACTAACACCA---GACATCAA-GCGTCAT---TATCTA---TTGGC------AT-TCCCCCCACTAACGCCACTAAAATC--TG-A---ATCAC--AA-------CTTACAGT------------------------TTT-TT------------CTTTTAAGGAGTCTAATCGTATCTGTGATTTTTTGT----TCCTGCAGCCTACAGGCCATCTGACAACGCCAGCAGCTATAACAATGGCGGCTATAACAAC---------------------------------------------------------------------------------TAC-----------------AGCAATGGCA---ATGGCAACAACAGCTACAGCCCCTACACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TGGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-GCCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGCAA-------TTTAAAGA------------------------AAGTTA------------TGGCTAA-----CAAATT----------C------------------------------------------------------------------------CATT--------------------------------TCT--TTTGTTCAATATAGGTCCAAGACCATC-------GGCGGCT---AGCGT-TGAAAG---------------------------CAGCTACAGTCCTTACACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGACCATC-------GGCGGCT---..........................................................2012.00202000000000000000
..................................................................................GAATGGAGGATATAGCAGCAC---C---------------------------------ACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000002000
...................................................................................................GCAC---C---------------------------------ACAGCC---GATGCCGTTGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
..................................................................................GAATGGAGGATATAGCAGCAC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................AGCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATC-------GGCGGCT---AGC.......................................................2111.00101000000000000000
...................................................................................................GCAC---C---------------------------------ACAGCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...................................................................................AATGGAGGATATAGCAGCAC---C---------------------------------ACAGCC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000000000
droSec2
TCCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------A-TTGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAT-GCCCCATTTGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGCAG-------TTTAAAGA------------------------AAGTTA------------TGGCTAA-----CAAATT----------C------------------------------------------------------------------------CATT--------------------------------TCT--TTTGTTCAATATAGGTCCAAGACCATC-------AGCGGCT---AGGAATCCAAAG---------------------------CAGCTACAGTCCTTACACGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................GCAGCAC---C---------------------------------ACAGCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020020
..........................................................................................................C---------------------------------ACAGCC---GATGCCGTTGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................CAC---C---------------------------------ACAGCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.................................................................................................................................................C---GATGCCGTTGATGGTGA--GC----AGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................ATATAGCAGCAC---C---------------------------------ACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGGTTGAGGTT-----GCTTCTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGCAC---C---------------------------------ACATCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCT--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTTTAAAA-GCCCCATTCGACTAATC--A---AACATCCAAAAGGCCC---TACAAA---TTGGCT--CACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATGTAA-------TTTAAACT------------------------TTC-TT------------TGGCTAA-----AAAATT----------C------------------------------------------------------------------------TATT--------------------------------TAT--TTTGTTTAATATAGGTCCAAGACCATC-------GGCGGCT---AGCGT-TGAAAG---------------------------CAGCTACAGTCCTTACACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................GA------C--------TCATCACACATCGC-CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000
............................................................................................................................................ACATCC---GATGCCGTTGATGGTCC--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
...................................................................................................GCAC---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GATA-----CGA------C--------TCATCACACATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGCTGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TC-T-TACTAAGCGGTTGAGGTT-----GCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCTC-T-TACTAAGCGGTTGAGGTT-----G......................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-------GGCGGCT---AGCGT-TGAAAG---------------------------CAGC...............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCT---AGCGT-TGAAAG---------------------------CAGCTACAGT.........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
......................................................................................................C---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CTC-T-TACTAAGCGGTTGAGGTT-----GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TACTGATCC-CGATA-----CGA------C--------TCATCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGGTCCAAGACCATC-------GGCGG...............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCGGTTGAGGTT-----GCTTCTTTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
....................................................................................................................................................................................CCT--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...............................................................................................................................................................................................................................................TCGCTT-TACTTT---TTGGGT--GA--TTTT------GG-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AC---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....GCTGC-------------------------------------------------------------------------GAATGGAGGATATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCT---AGCGT-TGAAAG---------------------------CAGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTT-----GCTTCTTTTAAAA-GCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TA-----CGA------C--------TCATCACACATCGC-CAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TGGAGGATATAGCAGCAC---C---------------------------------ACATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TGCCGTTGATGGTGA--GC----AGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGACCATC-------GGCGGCT---A.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCTGC-------------------------------------------------------------------------GAATGGAGGATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................GA------------------------------------T-TTGGCTCGCTT-TACTTT---TTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACTAAGCGGTTGAGGTT-----GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCTC-T-TACTAAGCGGTTGAGGTT-----.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T-TTGGCTCGCTT-TACTTT---TTGGGT--GA--T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TT------------TGGCTAA-----AAAATT----------C------------------------------------------------------------------------TATT--------------------------------TAT--T.....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................T---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATATAGGTCCAAGACCATC-------GGCG................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................TT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGC-------------------------------------------------------------------------GAATGGAGGATATAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TC-T-TACTAAGCGGTTGAGGTT-----GCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................TGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------------------------------TAT--TTTGTTTAATATAG........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACCTGCTGC-------------------------------------------------------------------------GAATGGAGGATATAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TGGAGGATATAGCAGCAC---C---------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCTC-T-TACTAAGCGGTTGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......GC-------------------------------------------------------------------------GAATGGAGGATATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATC-------GGCGGCT---A.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................CATCC---GATGCCGTTGATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GCTT-TACTTT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGC-------------------------------------------------------------------------GAATGGAGGATATAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GC-CAGCTC-T-TACTAAGCGGTTGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................CCCT--------AAGGA------------------------------------T-TTGGCTCGCTT-TAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TA-----CGA------C--------TCATCACACATCGC-CAGCTC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AGCAC---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TC-T-TACTAAGCGGTTGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGT-TGAAAG---------------------------CAGCTACA...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TT---TTGGGT--GA--TTTT------GG-T---------------------------------------------------TCAGCTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------CAGCTACAGTCCTTACA..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCTC-T-TACTAAGCGGTTGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................T--------AAGGA------------------------------------T-TTGGCTCGCTT-TAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------GGCGGCT---AGCGT-TGAA................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GCAGCAC---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ATATAGCAGCAC---C---------------------------------ACATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TCAGCTACTGATCC-CGATA-----CGA------C--------TCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCATC-------GGCGGCT---AGCGT-TGAAA...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................AATGGAGGATATAGCAGCAC---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------TGGCTAA-----AAAATT----------C------------------------------------------------------------------------TATT--------------------------------...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAGACCATC-------GGCGGC..............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TC-T-TACTAAGCGGTTGAGGTT-----GCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................CAC---C---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TCAGCTACTGATCC-CGATA-----CGA------C--------T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TACTAAGCGGTTGAGGTT-----GCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAA--CT-G------ATGTAA-------TTTAAA................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TACTGATCC-CGATA-----CGA------C--------TCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTTAAAA-GCCCCATTCGACTAA..........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGACCATC-------GGCGGCT---AGCGT-T...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................T--------AAGGA------------------------------------T-TTGGCTCGCTT-TACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTT-----GCTTCTTTTAAAA-GCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCATC-------GGCGGCT---AGC.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TACTGATCC-CGATA-----CGA------C--------TCATCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---AGCGT-TGAAAG---------------------------CAGCTACAGTCCT......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T-TTGGCTCGCTT-TACTTT---TTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CACACATCGC-CAGCTC-T-TACTAAGCGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................T--------AAGGA------------------------------------T-TTGGCTCGCTC-CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATT----------C------------------------------------------------------------------------TATT--------------------------------TAT--TTTGG.................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AACTGGCGC-------------------------------------------------------------------------GAATGAAGGATATAGCAGCAC---T---------------------------------ACATCC---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCCT-TACTTT---TTGGGT--GG--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTGCTAAAAGAACCCATTCGACTAACC--A---GTCATCCAAAAGGCCC---TACAAA---TTGGCT--CACAA-T-CCCCCACTAACAGCACTAATAAA--CT-G------ATGA-A-------TTTGAAGA------------------------AAGTGG------------TGGCTAA-----CGAACT----------A------------------------------------------------------------------------TTTT--------------------------------TCC--TCTGTTAAATATAGGTCCCAGACCATC-------GGCAGCT---AGCGT-GGAAAG---------------------------CAGCTATAGTCCTTACACGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCAGACCATC-------GGCAGCT---AGC.......................................................2413.0031200000
................................................................................................GCAGCAC---T---------------------------------ACATCC---GATGCCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0021000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCCAGACCATC-------GGCAGCT---AGC.......................................................2312.0020000200
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCAGACCATC-------GGCAGCT---AGCGT-....................................................2611.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCCAGACCATC-------GGCAGCT---AG........................................................2311.0011000000
................................................................................................GCAGCAC---T---------------------------------ACATCC---GATGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-GGAAAG---------------------------CAGCTATAGTC........1911.0010000010
.................................................................................................CAGCAC---T---------------------------------ACATCC---GATGCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................................GAATGAAGGATATAGCAGCAC---T---------------------------------AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....................................................................................................CAC---T---------------------------------ACATCC---GATGCCGTTGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
AACTGGCGC-------------------------------------------------------------------------GAATGAAGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-GGAAAG---------------------------CAGCTATAGTCCTTACAA.2611.0010000010
.....................................................................................................................................................................................................................................................................................................................................................GATCC-CGATA-----CGA------C--------TCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-GGAAAG---------------------------CAGCTATAGTCC.......2011.0010000100
droYak3
AACTGGCGC-------------------------------------------------------------------------GAATGGAGGATTTAGCAGCGCACAG---------------------------------ACATCC---GATGCAGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT---TTGGGT--GG--TTTTGGTTCTGG-T---------------------------------------------------TCTGCTACTGATCC-CGATA-----CGA------C--------TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-GCCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TAGGCT--TACAA-TCCTCCCACTAACAGCACTAATAAA--CT-G------ATCAAA-------TTTAAACG------------------------GACTTT------------CGGTTAA-----CGAATT----------A------------------------------------------------------------------------TATT--------------------------------TCT--TTTGTTAAATTTAGGCCCAAGACCATC-------TGCAGCT---AGCGT-TGAAAG---------------------------CAGCTATAGTCCTTACACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................GCAGCGCACAG---------------------------------ACATCC---GATGCAGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2915.00500000000005
...TGGCGC-------------------------------------------------------------------------GAATGGAGGATTTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..................................................................................GAATGGAGGATTTAGCAGCGCACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................GAATGGAGGATTTAGCAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..........................................................................................GATTTAGCAGCGCACAG---------------------------------ACATCC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCT---AGCGT-TGAAAG---------------------------CA.................1911.00100000010000
................................................................................................GCAGCGCACAG---------------------------------ACATCC---GATGCAGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCT---AGCGT-TGAAAG---------------------------CAGCT..............2211.00100001000000
droEug1
CGCTGGCCA-------------------------------------------------------------------------GAATGAAGGATGCAGCAACACCGCC---------------------------------ACAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCCGC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GT--TATT------GG-T---------------------------------------------------TCTGCTACTGATCC-CGATA-----CGA------A--------TCATCATAAATCGA-CAGCTC-T-TACTAAGCGGTTAAGGTT-----GCTTCTTCTAAAA-ACCCCATTCGACTAATC--A---GACATCCAAAAGGCCT---TATAAA---TTGGCT--GACAA-ACCTCCCACTAACTGCACTAAAATA--ATTG------A-GGAC-------TTTAGAGT------------------------GAATTA------------AGGTTAA-----TTAATG----------C------------------------------------------------------------------------TGTT--------------------------------TTTT-CTTTTGTAATTAAGGTCCAAAACCATC-------AGCAGCC---AGCGT-GGAAAG---------------------------TAGCTATACTCCCTACACASizeHit CountTotal NormTotal
No Reads
droBia1
AGCTGGCCA-------------------------------------------------------------------------GAATGGAGGATACTCC-GC-----T---------------------------------CCAGCCGTTGACGCCGTTGATGGTGA--GC----AGAGCCC-C--------GAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT---T--TTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATA-----CGA------C---TCA--TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAC-ACCCCATTCGACTAACT--A---GACATTCAAAAGGCCT---TATAAA---TTGGCT--G-------CTCCCACTAACTGCACTAAAATA--AT-T------ATGG---------TATGCGGA------------------------AGGATA-------------GGAAAG-----TAATTT----------A------------------------------------------------------------------------AACT------------------------------T-T----CTTTACAAATGTAGGTCCAAAACCATC-------GGCCGTC---GGCTT-GGAGAG---------------------------CAGCTACAGCCCCTACACASizeHit CountTotal NormTotal
No Reads
droTak1
AGCCGG----------------------------------------------AAATGGGAATGGAAATGGAAATGGTGGCCAGAATGGAGGATACTCCAG---------------------------------------CCCAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCCCCGCCCCCAAGAGGA------------------------------------G-TTGGCTCGCTT-TACTTT----TGGGT--GT--TTTT----ATGG-T---------------------------------------------------TCCGCTACTGATCC-TGAT------CGA------C--------TCATCATACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-ACCCCATTCGACTAACC--A---GACATCCAAAAGGCCT---TACAAA---TAGGCCATGA-AA-AACTCCCACTAACTGCACTAAAATA--AT-A------ATGGGA-------TTTAAAGT-GA---G---TTC---------------CA------------TG--AAA-----GTAATT----------A------------------------------------------------------------------------AATT------------------------------T-TCC--TTTCACAAATGTAGGTCCAAGACCATC-------GGCAGCC---AGCGT-GGACAG---------------------------CAGCTATAGTCCCTACATASizeHit CountTotal NormTotal
No Reads
droEle1
AGCTGGAG----------------------------------------------------------------------GCCAGAATGGAG------------------------------------------------------CA---GATGCCGTTGATGGTGA--GC----AGAGCCCCC--------AAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GTTTTTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATTCGATACAATACCGAC---TC---TCATCACACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-CCCCCATTCGACTAACCC-T---GACATCCA-AAGGCCC---TACAAA---TGGGCC--GGCAA-ACCTTCCACTAACTGCACTAAAATATATT-T------TTGGA--------TATATAAA--------------AA--------GAAATA------------TTGTTAG-----TAAATA----------A------------------------------------------------------------------------CATA------------------------------TT-----TTTTTTAAATGTAGGTCCCAAACCATC-------GG------------T-GGAAAG---------------------------CAGTTATAGCCCCTATACASizeHit CountTotal NormTotal
No Reads
droRho1
AGCTGGTCA-------------------------------------------------------------------------GAATGGAGGATACAGCAACAG---CAACAGC---AAC------AGCAATACCCT---CCCAGCA---GATGCCGTTGATGGTGA--GC----AGAGCCC-C--------GAGGA------------------------------------T-TTGGCTCGCTT-TACTTT----TGGGT--GT--TTTT------GG-T---------------------------------------------------TCAGCTACTGATCC-CGATA---TACGA------T--------ACATCATACATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTCTTAAAA-CCCCCATTCGACTAACC--A---GACATCCA-AAGGCCC---TACAAA---TTGGCT--GAGAA-TCCTCCCACTAACTGCACTAAAATA--TT-TAA------A----ATAA--ACTAGAGT------------------------AGAAAAAG------------GGAAT-----TTAAAT----------T------------------------------------------------------------------------TATT--------------------------------TATCCC-TTCTTAATATAGGTCCAAGACCGTC-------AGCAGCC---AGCGT-GGAAAG---------------------------CAGTTATAGCCCTTATACASizeHit CountTotal NormTotal
No Reads
droFic1
CGCCAATG-------------------------------GAG---GCCAGAACGATG---------------------GCCAGAACGGAGGATACAG------------------------------------------CCAGGCG---GATGTCGTTGATGGTGAGAGC----AGAGCATCC--------AAGGA------------------------------------T-TGGGCTCGCTT-TACTTT----TGGGT--GG--TTTC----ATGG-T---------------------------------------------------TCCGCTACTGATCC-CGAAACGATACGA---------------TCATCATGCATCGC-CAGCTC-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-CCCCCATTCGACTAACC--ATTCGACATCGA-AAGGCCC---AACAAA---ATGGCT--AAGAA-ACCTCCCACTAACTGCACTAAAATA--TT-T------ATTT-A-------TTTAAAT------------ACTAC-GA-----AAGTGG------------TGACTA----------------------------------------------------------------------------------------TAATGAGTGTT--------------------------------T----CTTTTTAAATTTAGGTCCTAAGTCATC-------AGCAACT---AGTGT-GGAGAG---------------------------CAGCTATAGCCCCTACACASizeHit CountTotal NormTotal
No Reads
droKik1
CGCAGCAGC-------------------------------------------------------------------------GGCT------------------------------------------------------GCCCCA---GATGCCGTTGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------T-TTGGCTGGCTT-TACGTTTCGTTGGGT------TTTT------GG-T---------------------------------------------------TCCGCTACTGATCC-CGATA-----CGA------C--------TCACCACACATCGC-CAGCAA-T-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAA--CCCCCATTCAACTAACC--A---GACATCCACAAGGCCC---TACAAA---TTGGCAACAAAAA-TCCTCCAACTAACAGCACTAAATTT--AT-TA-----A-TAAA-------CTTA-AGT-------------T-TGGT--------CTG------------GGGACAC-----TTGATA----------A------------------------------------------------------------------------TAT---------------------------------TAT--TTTTTCAAATGTAGGTCCGAGGCCATC-------GGCAGCT---TCCGT-GGACAGCAACAGCA---ACA------ACTACAGCAGCAACAG--------CASizeHit CountTotal NormTotal
No Reads
droAna3
AGCTGCCCC---------CACTG-AGGGGTACACCAATGGGAACAGCAACAGCAATGGCAATGGCAATGGC---------------------AATAGCAGC------------------------------AGCAACAGCCCCTCA---GATGTTGTTGATGGTGA---------------------------GGA------------------------------------C-TTGGCTGGCATTTGCTTA---ATG-GT------TTTTGGTTTTGG-A---------------------------------------------------T---ATACTGATCC-CGATA-----CGA------C--------TCATGATACATCGC-CAGCAA-A-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA---CCCATTCCACTAATT--A---GACATCCA-AAGGCCT---CACAAA---TTGGCT--CACCA-A-TCCCCACTAACCGCACTAAAATAAAAT-----ATCAG----A-AAATC---------AATAAC-------ATGGCTTGGA-------G-----------------AAAAACTAATA----------A------------------------------------------------------------------------AATA--------------------------------TAT--TTTTTTAAATCTAGCTCCCCGGTCAGC-------ACCAGCTCCCAGTGT-GGAAAGTA---------ACA------ATGGCAATAGTTATATTCCATATACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------ACCAGCTCCCAGTGT-GGAAAG..............................................2312.002000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCCAGTGT-GGAAAGTA---------AC.................................2212.002000002
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------ATGGCAATAGTTATATTCC.......2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACA------ATGGCAATAGTTATATTCCA......2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------ACA------ATGGCAATAGTTATATTCCAT.....2511.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCAATAGTTATATTCC.......1911.001010000
.........................................................................................................................................AGCCCCTCA---GATGTTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------ACCAGCTCCCAGTGT-GGAAA...............................................2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-GGAAAGTA---------ACA------ATGGC.....................1811.001000001
.........................................AACAGCAACAGCAATGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111100000
droBip1
AGCTGCCCC---------AACTG-ACAGCT------------------ACGCCAATGGCAACAGCAACAGC---------------------------------------------AATGGCAACAGCAGCAGCAACACTCCCTCC---GATGTTGTTGATGGTGA---------------------------GGA------------------------------------C-TTGGCTGGCATTTCCTTA---AT-GGT------TTTTGGTTTTGG-A---------------------------------------------------T---ATACTGATCC-CGATA-----CGA------C--------TCATGATACATCGC-CAGCAA-A-TACTAAGCGGTTGAGGTT-----GCTTCTTCTAAAA-A-CCCATTCCACTAATT--A---GACATCCA-AAGGCCC----ACAAA---TTGGCT--CACCA-ATCTCCCACTAACAGCACTAAAATA--AA-AAATATCAC----A-AAATC---------CATGAC-------ATGGC----A-------G-----------------GGAAGTTAATA----------A------------------------------------------------------------------------AATA------------------------------TTTTT--GTATTTAAATTCAGCTCCCAGATCAGC-------ACCAGCTCCCAGTGT-GGAAAGTA---------ACA------ATGGCAACAGCTATATCCCATACACASizeHit CountTotal NormTotal
No Reads
dp5
ACCAGCCAC-----------------------------------------------CA------------------------AAATGGAGACTACAATGGCAG---CAACGGAAGCAAT------TA---------CAACAACTCA---GACGCTGTCGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------C-T-CGCTGGCTT-GATCAT----TGGGG------TTTT------GG-T---------------------------------------------------TCCGATACTGATTT-CGATA-----CTC------T--------TCATGACACCTCGC-CAGCAA-T-TACTAAGCGGTTACGGTT-----GCTTCTTCTAAA---CCACATTCAACTAACTCAA---GACATGGAAAAGGCCC---TACAAAAGCCTGGCT--C--AA-ACCTCCCACTAACTGCACTAAACGATTTT---A------T----TCAAGC---------AACAACGGTT--T--------------------------------------------------------------------------------------------------------------------------------------TCGTTTCAATGCGGTATCTAATGCAAATATT-----TTCTTCAAATGTAGGTCCAAAATCGTTTGACAACAGCAGC--------------------AACA---ACA------ACTGCAACAGCTATAGCCCCTACACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTGACAACAGCAGC--------------------AACA---AC.................................2411.0010100000000
........................................................................................................................................CAACAACTCA---GACGCTGTCGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
......CAC-----------------------------------------------CA------------------------AAATGGAGACTACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................AATGGCAG---CAACGGAAGCAAT------TA---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTGACAACAGCAGC--------------------AACA---AC.................................2311.0010100000000
.........................................................................................GACTACAATGGCAG---CAACGGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....................................................................................ATGGAGACTACAATGGCAG---CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................AAT------TA---------CAACAACTCA---GACGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
droPer2
ACCACCAGC--------------------------------------------AACCA------------------------AAATGGAGACTACAATGGCAG---CAACGGAAGCAAT------TA---------CAACAACTCA---GATGCTGTCGATGGTGA--GC----AGAGCT--G--------AAGGA------------------------------------C-T-CGCTGGCTT-GATCAT----TGGGG------TTTT------GG-T---------------------------------------------------TCCGATACTGATTT-CGATA-----CTC------T--------TCATGACACCTCGC-CAGCAA-T-TACTAAGCGGTTACGGTT-----GCTTCTTCTAAA---CCACATTCAACTAACTCAA---GACATGGAAAAGGCCC---TACAAAAGCCTGGCT--C--AA-ACCTCCCACTAACTGCACTAAACGATTTT---A------T----TCAAGC---------AACAACGGTT--T--------------------------------------------------------------------------------------------------------------------------------------TCGTTTCAATGCGGTATCTAATGCAAATATT-----TTCTTCAAATGTAGGTCCAAAATCGTTTGACAACAGCAGC--------------------AACA---ACA------ACTGCAACAGCTATAGCCCCTACACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTATAGCCCCTACACA2011.001010000
............................................................................................................................................AACTCA---GATGCTGTCGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGTTTGACAACAGC.................................................................1811.001100000
droWil2
AGCAGTTGCAGCTGCTCCAATTACTCAGCC------------------AA----------------------------GTCAGAATGGAGACTATA------------------------------------------------CC---GATAGCGTTGATGGTGA--GCTTGTGGAGCT--A--------AAGGA------------------------------------A-TT---TTACTT-TATCAA---TTGGGT------TCTT------GG-T---------------------------------------------------TCACCT---AATCT-GGACA-----CTC------AGTCTCAATT--CCATCCATCGCCCAGCAA-T-TACTAAGCGGTTACGGTTTTACGGCTTTATCTAAA---TCACATTTAAC-------------------------CC---CATGAA---ATGGCT--AATTAATTTCCCCACTAAAACCACTAATAAA--AA-G------AATAAG-------CA----------------------------------AAAACAAGTTTAAAATTTTAAAAATTATTGCCAAAACTAATAATTAT--------------------------------------------------------------------TGTTTTTG-----------------------------------TTTCCAAT-TAGGCTATAAACCTCA-------AGCAATT---GGT----AATAG---------------------------CAACTATAGTCC-------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................CAGCC------------------AA----------------------------GTCAGAATGGAGACTATA------------------------------------------------CC---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00330000
.............................................................................................ATA------------------------------------------------CC---GATAGCGTTGATGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200011
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCA-------AGCAATT---GGT----AATAG---------------------------CAACT..............2411.00100100
......................ACTCAGCC------------------AA----------------------------GTCAGAATGGAGACTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100001
...................ATTACTCAGCC------------------AA----------------------------GTCAGAATGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAACCTCA-------AGCAATT---GGT----AATAG---------------------------C..................2711.00100010
............................................................................................TATA------------------------------------------------CC---GATAGCGTTGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................................................................................CTATA------------------------------------------------CC---GATAGCGTTGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................CAGAATGGAGACTATA------------------------------------------------CC---GATAGCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
........................................................................................AGACTATA------------------------------------------------CC---GATAGCGTTGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...............................................................................................A------------------------------------------------CC---GATAGCGTTGATGGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100001
droVir3
CCAGAACGG-------------------------AAATGACG---ACTACAGCAACAGCAACAACAACAGC---------------------------------------------AAC------AGCAACAACAT---TAGCCAA---GATGCCGTTGATGGTGA--GC----AGTGAGA----------GAGAGAGAGAGAGAGAGAGAGAGACTTTGGATATCGCATCAT-TTCGCGGGCTT-TTGGTT------------------TGGTTTTGG-G---CACTCTAATATTTACACTGTC-----AGTGGGCCAAAGTTCTCTTGGTACAGTTCTTGGCCCTCGGCT-----CGC------C--------TCATG-CTCTTCGC-CGGCTAGT-TACTAAGCGGTTTCTGGT-----GCTT----TAA-A-ACGACATCTGACTAATCCCA---GACATCAA-GCGGCAT---TATCTA---TTGGC------AT-TCCCCCCACTAACGGCACTAAAACA-----G-A-TTCAC--AAT------TCCTCAAT------------------------CCTTTA------------CAATCCA-----CTAATCCCAGC-----TTGTTCGT----CTCTGCAGGGTACAAACCAACT--------------------------------------------------------------------------------------------------------GGC-------AACAGCTAC-----------------AACA---ACAGTAACGGCAACAACAGCTACAGCCCATACACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----TTGTTCGT----CTCTGCAG....................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACT--------------------------------------------------------------------------------------------------------GGC-------AACAGCTAC-----------------AAC.......................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................CG---ACTACAGCAACAGCAACAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................AACAACAT---TAGCCAA---GATGCCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................CAA---GATGCCGTTGATGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTAACGGCAACAACA.................1830.331001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AGAGAGAGAGAGAGAGAGACTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000000000000100000000000000000000000000
....................................................CAACAGCAACAACAACAGC---------------------------------------------AAC------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
....................................................CAACAGCAACAACAACAGC---------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................AACAGCAACAACAACAGC---------------------------------------------AAC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................AACAACAACAGC---------------------------------------------AAC------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
..................................................AGCAACAGCAACAACAACAGC---------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TCAGAACGG-------------------------------------------------------------------------CAATGGCGACTACAACAGCAG---CAACAGC---AATAACAACAACAACAACAGCAACAGCCAA---GATGCCGTAGATGGTGA--GC----AGAGCGA----------GAGAG--AGGGAGAGCGAGAAACTCTTCGGATATCTCATCAT-TTCGCTGGCTTTTAGTTA---TTGGTTTCGG--TTTTGGTTCTGGGT-CACACTCTAAC---CCCACTCTC----GAGTGGGCCAAAGTTCTCTTGGTACAGTTCTTGGCCCGCGGCT-----CGC------C--------TCATGTCG-CTCGC-CGGCTAAT-TACTAAGCGGTATCTGGT-----GCTT----TAAAA-ACCACATCTGACTAATCCCA---GACATCAA-GCGACATCTCTCTTTA---TTGG------CAA-T-TCCCCACTAACGGCACTAAACAC--AA-A---ATCAC----C------TTCTCTATCCTCCA------------CCTGCA-------G-----------------CAATTCTAATCCCAGT-----TT---CGTCTATTCCTGCAGCCTACAAGCCAGCTGGCAA------CAGCTACAGCAATGGTAACTACAACAAC--------------------------------------------------------AACAACAGCATT-------GGCAAC----AGC----------------------A------ACAGCAACAGTTACAGTCCCTATGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGCCAGCTGGCAA------CAG........................................................................................................................................................................2113.003300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGTAACTACAACAAC--------------------------------------------------------.......................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAAGCCAGCTGGCAA------CAGC.......................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGCAA------CAGCTACAGCAATGGTAAC........................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAGCAATGGTAACTACAACAAC--------------------------------------------------------AAC....................................................................................2811.001100000
.........................................................................................GACTACAACAGCAG---CAACAGC---AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAAC--------------------------------------------------------AACAACAGCATT-------....................................................................2211.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--------------------------------------------------------AACAACAGCATT-------GGCAAC----AGC----------------------A------..........................2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-------GGCAAC----AGC----------------------A------ACAGCAACAGT...............2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCATT-------GGCAAC----AGC----------------------A------ACAGCAACA.................2820.501000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC--------------------------------------------------------AACAACAGCATT-------GG..................................................................2220.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCATT-------GGCAAC----AGC----------------------A------ACA.......................2130.331000001
......................................................................................................................TAACAACAACAACAACAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................................................................................ACAACAACAACAACAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
CCAAAATGC-------------------------CAATGGTG---ACTACGGCAATGGCAGCAGCAACAGC---------------------------------------------AAC------AACAACAACAT---CAGCCAA---GATGCCGTTGATGGTGA--GC----TC----TCC-------AGAGCA---------------TTGACTTTGGATATCGCATCATATTCGCTGGCTT-T----T----TGGTT---------TGGTTTTGGGTTCACTCTCTAAT---CCCACCGTCACAGAAGTGGGCCGAAGTTCTTTTGGTACAGTTCTTGGCCCTCCGCT-----CGC------C--------TCATGT-TGATCGC-CGGCTAATGTACTAAGCGGTTTCTGGT-----GCTT----TAA-A-ACGACATTTGACTAACACCA---GACATCAA-GCGTCAT---TATCTA---TTGGC------AT-TCCCCCCACTAACGCCACTAAAATC--TG-A---ATCAC--AA-------CTTACAGT------------------------TTT-TT------------CTTTTAAGGAGTCTAATCGTATCTGTGATTTTTTGT----TCCTGCAGCCTACAGGCCATCTGACAACGCCAGCAGCTATAACAATGGCGGCTATAACAAC---------------------------------------------------------------------------------TAC-----------------AGCAATGGCA---ATGGCAACAACAGCTACAGCCCCTACACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATGGCAACAACAGCTACAGCCCCT.....2511.00110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCATCTGACAACGCCAGC..........................................................................................................................................................................2111.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------AGCAATGGCA---ATGGCA.......................1890.11110

Generated: 05/19/2015 at 12:44 AM