ID:

dsi_14332

 Coordinate:

3r:9131120-9131269 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.7 -13.9

Flybase annnotation

CDS [3r_9131270_9131436_-]; exon [3r_9131270_9131436_-]; intron [3r_9128722_9131269_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGTGGCATCCACCACGAACGGAAAGATCACCAAAAAGGTGTTGTAGACGAAAGTAAAGCGGGTTTCACTTGATTAAAAAAATACTAATAATAATATTGGGTGGGGAAAACAATTTGCTATTCCAGGGAAATTGTAAAATGCTAGATTTTTACAAAGAACGCAGTTTACGTTTCTGCCTCCCTTATAAATCTCATT
*******************************************************************************.....((.................(((((((((.....(((((((((((.....................))))))))))).......)))))).)))...))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
................ACTTAAGACTGTATTGATG....................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............TTCACTTAAGACTGTATTGATGATAGC.................................................................................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..............TCACTTAAGACTGTATTGATGATAGC.................................................................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
................ACTTAAGACTGTATTGATGATAGC.................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 1 0 0 0 0 0 1 0
.....................AGACTGTATTGATGATAGCGA................................................................................................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
...........TTTTCACTTAAGACTGTATTGATGATAG................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................AGACTGTATTGATGATAGCGAAACAACT......................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............TCACTTAAGACTGTATTGATGATAG................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................GATCACCAAAAAGGTGTTGTA...................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................TGTTGTAGACGAAAGTAAAGCGGGT.................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
....................AAGACTGTATTGATGATAGCGAAA.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................ACTTAAGACTGTATTGAT........................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........TTTTCACTTAAGACTGTATTGATGATAGC.................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................AACAATTTGCTATTCCAGGG.................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............TTTCACTTAAGACTGTATTGATGATAGC.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....CCGTAAATTTTCACTTAAGACTGTATT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................ACTTAAGACTGTATTGATGATAGCGA................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
............TTTCACTTAAGACTGTATTGATGA...................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...........TTTTCACTTAAGACTGTATTGATGA...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................TGTAAGTGCGGCACCCACCTCGA.................................................................................................................................................................................. 23 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0
......................................................GTGTCGCATCCACCA..................................................................................................................................................................................... 15 1 5 0.40 2 0 0 0 0 0 2 0 0 0 0
.........................................................................................................................................................................TGCTATTCTAAGGAAATAGTA............................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 0 1
.............................................GACTTGTAAGTGTGG.............................................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
..........................GTATTGATGTTAGCGGAA.............................................................................................................................................................................................................. 18 2 8 0.13 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................ATAATTTTGGGTGTAGAAAAC..................................................................................... 21 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...................TAAGACTGTATTGATCT...................................................................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 0 0 1
.....................................AGCGAAACAACTCGT...................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................TAATACTCGGTGGGGA......................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CGCGGGCATTTAAAAGTGAATTCTGACATAACTACTATCGCTTTGTTGAACATTCACACCGTAGGTGGTGCTTGCCTTTCTAGTGGTTTTTCCACAACATCTGCTTTCATTTCGCCCAAAGTGAACTAATTTTTTTATGATTATTATTATAACCCACCCCTTTTGTTAAACGATAAGGTCCCTTTAACATTTTACGATCTAAAAATGTTTCTTGCGTCAAATGCAAAGACGGAGGGAATATTTAGAGTAA
********************************************************************.....((.................(((((((((.....(((((((((((.....................))))))))))).......)))))).)))...))******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
..................................................................................................................................................................................................................................AGACGAAGGGAATATTT....... 17 1 3 0.33 1 1 0 0 0 0
.............................................TTGAACATTCAGAGCGT............................................................................................................................................................................................ 17 2 13 0.08 1 0 1 0 0 0
..............................ATTACTATCGCTTTG............................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 1
...................................................................................................................................................................................TTCTTTAACATTTTACTATCT.................................................. 21 3 20 0.05 1 0 0 1 0 0
.................................................................................................................................TTTTTTTATGATTAG.......................................................................................................... 15 1 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:9131070-9131319 - dsi_14332 GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGGA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AATACTA-ATAATAATA-----------T-----------------T--GGGTGGG-GAAA-A--CAATTTGCTATTCCAGGGAAATTGTAAAATGCT---------------------AGATTTTTACAAA-------------------GAACG-----------------------------------------C------------AGTTT-----------------A------------------------CGTTTCTGCCTCCCTTA---------------------TAAATCTCATT
droSec2 scaffold_12:2027460-2027707 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGGA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AA---TA-ATAATAATA-----------T-----------------T--GCGTGGG-GAAA-A--AAATTTGCTATTCCAGGGAAGTTGTAAAATGCT---------------------AGATTTTTACAAA-------------------GAAC-------------------------G---------------GC------------AGTTT-----------------A------------------------CGTTTCTGCCTCTCTTA---------------------TAAATCTTATT
dm3 chr3R:12119826-12120074 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGAA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AAAAATT-GTAATAATA-----------T-----------------T--GCGTGGG-GAAA-A--CCATTTGCTATTCCAGAAAAGTTGTGAAATGCT---------------------AGATTTTTA-AAA-------------------GAACG-----------------------------------------C------------AATTT-----------------A------------------------CGTTTCTGCCTCCCTCA---------------------TAAAACTCTTT
droEre2 scaffold_4770:11644126-11644378 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--GAATGAA-AAA----AAAACAACACCAAA--------------------AA-----GGTGT----AGACGAAAGTAAAGCGGTTTTC-ACTTGAT----------TTCCAAAAA----------------------------AA---TA-ATAATAATA-----------T-----------------T--GTGTGGG-GATA-A--CAATTTGCTATTCCAGTAAAATAATGAACTCTT---------------------CGATTTTTA-AAA-------------------CAATGCT-------G--------------------------------------------ACTTT-----------------A------------------------CGTATTTCCTTCCCTCG---------------------TAAAACTCATT
droYak3 3R:14305016-14305265 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--AAGTGATAAAA-------ACATCACCAAA--------------------AA-----AGTGTTGT-AGACGAAAGTAAAGCGGTTTTC-ACTTGAT----------TTAAAA-------------------------------AA------GTAATAATA-----------T-----------------T--GTGTGGG-GATA-------TTTGCTATTCCAGGGAAATTATGCAATTCT---------------------AGATTTTCA-AAA-------------------GAATGCT-------GAC------------T---------------GT------------ATTTT-----------------A------------------------CGTGTCCGCCTCCCTCA---------------------TAAAACTCATT
droEug1 scf7180000409557:437434-437630 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAG--AAATTTA-AAG-------TTATCACCTTAAAA-----------------AG-----GGTGTTTTTTGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------GATAAA-------------------------------AA---T--GT---------------------------------------------------------------------------------------------------ATAACTTGCTAGATT---AG-A----------------AAA----------------------------------------------------------------------------------A------------------------CATTTCTGCTATCTTTAT--TC-----------------AACACTTATT
droBia1 scf7180000299102:45332-45572 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCAAACCA-----------C------------TAA--GACTGC--AAA-------CCATCATCAC---------------------AA-----GGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TGTAAT-------------------------------GA---TC-GCATAAATG-----------T-----------------T--GTATGGA-GCTATA--CAATTTGCTT-----------------AATGCT---------------------AGTTT---AG-A----------------AAACCAATGCT-------CGC------------T---------------GC------------ATTTT-----------------G--------TT-----------------TTTTGATTTCCTCT-TT--TT--------------AACACTTCATT
droTak1 scf7180000415580:579870-580096 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-ACCA-----------A------------TAA--GATTGA--AAA-------CCATCACCAGA--------------------AA-----TGTGTTTT-TGGCGAAAGTTAGGCGGGTTTC-ACTTGAT----------TACAAT-------------------------------AA---TC-ACATTTATA-----------T-----------------TTTATGTGGG-AGTATG--CATCTCGCTT----------------------------------------------ATC---AG-AATTAAACATCCTAAAAAAACCAATGCT-------AAC------------T---------------GC------------ATTTT-----------------A------------------------------------------------------------------TACTATT
droEle1 scf7180000490967:355513-355772 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCTT-----------C------------CA----------------------------------------------------AA-----GGTGTTTT-CGGCGAACGTTAAGCGGGTTTC-ACTTGAC----------TAAAAA-------------------------------AA---AT-ACTTAA--------GCTATAAAATAACTAACTTCCTTGAAA---------A------------------------AAAC-----ATTACA---------------------AGATT---TG-A----------------AAACCAATGATCAAA------------ACAAACG---------------GCCATTTAAACTGCAATGCAATGCATGTGAGAGAACATTTTAAAGTT-----------------TTTTAT-----------TTTT--------------CACATTTTTCA
droRho1 scf7180000780217:45272-45505 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCT-TTCT-----------C------------CAA--GAACGAA-AAAATAAAAATCAACACCAA---------------------AA-----GGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAC-------------------------------AA---AT-ACATTA--------GTTTCAT-----------------T-----------ATA-GC-------------------------------ATT---------------------AGATT---AA-A----------------ATTCCGATGCT-------CAA------ACAACCA---------------GC------------ATTCT-----------------TCTTTA-----------------------TATTTTTCTAT-----TT----------------TACACCTATTA
droFic1 scf7180000453580:42397-42652 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--GAATGAA-AAA-------CCATCACCAA---------------------AA-----TGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AA---TA-ACATTTTCA-----------C-----------------T--TTATGGGAGCAA-A--CCAGATGCTAAGACAGTAAA-------------------------------------------T-A----------------AAAAGA----------------------------TTATGCTAAGTGCAA------------------------------------------TTGTTTTTACTGCATTACAAATTTCTGCTTCCCTCAT--TT----------------CACATTTTTTG
droKik1 scf7180000302255:217967-218037 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCT-----------C------------TTC--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:15464926-15465136 + GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGC--TGCC-ACGGCCCGGCTCCTAC------------T-A--TCCTAC--TTA-------CTATCAACAAAAAC---------------------------------AAACTAAAGTTCGA----------------GCGGATTTCA------CAAGATGATAGTTGATTTTTGTTTAGAGA--TTTAATTTCTATATATA-----------T-----------------A--GAGTGGG-CGTA-A--CAGCTTTTTT----------------------------------------------ATT---CG-TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACACC
droBip1 scf7180000396708:4564933-4565122 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGC--TGCG-GACGAAAG-------C-AAACTATATTTCAAACAAATATA--------------------------------------------------------------------AGAGTGGATTTT-ACAAGAT----------GAAGAT----TTAATATTTGA--------------AT-----------------------------------------------------------------------------------------------TTTGG----------------------CTTTTA-AA--------------------------------------------------TCTTGCCAAG----------------------------------------------------------------------TCCG-------CT-CT--TTAAAACGTCTCTACAAGAATCTCATT
dp5 2:22494645-22494851 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCAAAACAACTTGTAAGTGT--GGCA-TTCT-----------T------------CAAACAAATGGA-AAA-------CTATCAACACAACGAAACTGAATTCTTTTCGTATTCTTTGTATTTT-TGATGAGGTATGAACGGAT--C-A--------------------------TTGATATCTTA--------------AT-----------------------------------------------------------------------------------------------GATGGTTAAAATGTCCAAGCGACT-----------------------------------------------------------------------------GC-----------------------------------------------------GTTGAAAATTT------------------------------------GTTTCATA
droPer2 scaffold_3:5275036-5275242 - GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCAAAACAACTTGTAAGTGT--GGCA-TTCT-----------T------------CAAACAAATGGA-AAA-------CTATCAACACAACGAAAGTGAATTCTTTTCGTATTCTTTGTATTTT-TGATGAGGTGTGAACGGAT--C-A--------------------------TTGATATCTTA--------------AT-----------------------------------------------------------------------------------------------GATGGTTAGAATGTCCAAGCGACT-----------------------------------------------------------------------------GC-----------------------------------------------------GTTGAAAATTT------C------------------------------TTTCATA
droWil2 scf2_1100000004943:3317360-3317591 + GCTCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTTCCTGAAA-TTAA-----------T------------CCG--AAATCGA-A-----------ATCACTTTA-------------------GAA-----TTTGTTGT----------TTAAGCGGATTTCGAGTTGAA----------AATAA-----------------------------------------TAATAGTATACGC------C---------------A-G--TTGTGGT--ATA-ACAAAACTTGAAA-TCCGTTTAA-TTA-AAAATTTT-----------------------TTTTTTC-AAA-----------------CCGAACA-----------------------------------------T------------AAATT-----------------A------------------------CATTTT-----CAAA-----TT----------------AAAGTGTCTCA
droVir3 scaffold_13047:1734035-1734265 + GCTCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTTT--ATTT-AAAACGCA-------AT-----------GCG--AAA--AA-A-----------ATTAC-------------------------G-----TTTGTTTT-TGGGCGAGTTAGCGCGGATTTC-ACATGGC----------GCCAAT---------------------------------------------------------------TGCTTGATTGCTTGATT----------------------------------ATGTAGCACAGTTTT---------------------AAATG---TG-T-------------ATAA---CAGTGTTCAGTGATCGCTGACTCACTGAGG---------------GACATGTCTGTGGCACTGT--------------------------------------------------C---------------------------------CTCTCTA
droMoj3 scaffold_6540:15443535-15443625 - GCGGCAGACGTTTCACTTTGAAGAGCGTACTACTGATAGCTATACAATTAGTAAGTAC--AACC-AATA-----------C------------CAC--AACTCAA-AAA---------AAAAAAAAA--------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:12552156-12552302 + GCGGCAGACGTTTCACTTTGAAGAGCGTACTACTGATAGCTATACAATTAGTAAGTAC--AACC-AAAAACCA-------C------------CCA--CACCAC---------------------------------------------------------------------------------------------------CACAAC---------------------------------------------------------------CACCAAACCACCCACAA----------------------------------AAATACTACAAAAAA---------------------AAAAA---AG-A-------------AAAA---AAATAAT------------------------------------------------------------------------------------------------------------------------------------------AAGAACCACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGGA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AATACTA-ATAATAATA-----------T-----------------T--GGGTGGG-GAAA-A--CAATTTGCTATTCCAGGGAAATTGTAAAATGCT---------------------AGATTTTTACAAA-------------------GAACG-----------------------------------------C------------AGTTT-----------------A------------------------CGTTTCTGCCTCCCTTA---------------------TAAATCTCATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................ACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000000000
.............TTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000011000000000
..............TCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000002000000000
................ACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200100000000100000
.....................AGACTGTATTGATGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
...........TTTTCACTTAAGACTGTATTGATGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................AGACTGTATTGATGATAGCGAAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..............TCACTTAAGACTGTATTGATGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
............................................................................................................G---------ATCACCAAA--------------------AA-----GGTGTTGT-A..............................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................TGTTGT-AGACGAAAGTAAAGCGGGT............................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
....................AAGACTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
................ACTTAAGACTGTATTGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000000000
...........TTTTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................................................................................................................................A-A--CAATTTGCTATTCCAGGG...............................................................................................................................................................................................................................2011.00100010000000000000
............TTTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
....CCGTAAATTTTCACTTAAGACTGTATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
................ACTTAAGACTGTATTGATGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
............TTTCACTTAAGACTGTATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
...........TTTTCACTTAAGACTGTATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................TAAGACTGTATTGATCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17110.09100000000001000000
droSec2
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGGA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AA---TA-ATAATAATA-----------T-----------------T--GCGTGGG-GAAA-A--AAATTTGCTATTCCAGGGAAGTTGTAAAATGCT---------------------AGATTTTTACAAA-------------------GAAC-------------------------G---------------GC------------AGTTT-----------------A------------------------CGTTTCTGCCTCTCTTA---------------------TAAATCTTATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........AATTTTCACTTAAGACTGTATTGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
......................................................................................................................................................................................................................................................A-ATAATAATA-----------T-----------------T--GCGTGGG-GAAA-A--A................................................................................................................................................................................................................................................2511.0010100
.............................................................................................................................................................................................................................................................................................................................................ATGCT---------------------AGATTTTTACAAA-------------------GAAC-------------------------G---------------GC------------A...............................................................................................2611.0010010
..............................TGATGATAGCGAAACAACTTGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
......................GACTGTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............TTTCACTTAAGACTGTATTGATGATAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
......................GACTGTATTGATGATAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAC--GAACGAA-AAG---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AAAAATT-GTAATAATA-----------T-----------------T--GCGTGGG-GAAA-A--CCATTTGCTATTCCAGAAAAGTTGTGAAATGCT---------------------AGATTTTTA-AAA-------------------GAACG-----------------------------------------C------------AATTT-----------------A------------------------CGTTTCTGCCTCCCTCA---------------------TAAAACTCTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................AAGACTGTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGACTGTATTGATGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................CTGTATTGATGATAGCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................TAAGACTGTATTGATGATAGCGAAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCACTTAAGACTGTATTGATGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
.....................AGACTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................AGACGAAAGTAAAGCGGGTTTC-ACTTG...................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
................ACTTAAGACTGTATTGATGATAGCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GT-AGACGAAAGTAAAGCGG..............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................TATTGATGATAGCGAAACAACTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................ACTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTATTCCAGAAAAGTTGTGA......................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................TTAAGACTGTATTGATGATAGCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACTTAAGACTGTATTGATGATAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATTGATGATAGCGAAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................T-AGACGAAAGTAAAGCGGGTT...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGATAGCGAAACAACTTGTAAGTGT--......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TCCAGAAAAGTTGTGAAATGCT---------------------AGATT......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTCACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................A--------------------AA-----GGTGTTGT-AGACGAAAGTAAAGCGG..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGACTGTATTGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................A-----GGTGTTGT-AGACGAAAGTA....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................ACTGTATTGATGATAGCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...................TAAGACTGTATTGATGATAGCGAAACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AACTTGTAAGTGT--GGCA-TCCA-----------C------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................TGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGTATTGATGATAGCGAAACAACTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................TAGCGAAACAACTTGTAAGTGT--GGCA-TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................ATTGATGATAGCGAAACAACTTGTAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................ACCAAA--------------------AA-----GGTGTTGT-AGACG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................ATTTGCTATTCCAGAAAAGTTGT........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................G---------ATCACCAAA--------------------AA-----GGTGTTGT-AGACGAAA.......................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................A--------------------AA-----GGTGTTGT-AGACGAA........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................ACTGTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAAGACTGTATTGATGATAGCGAAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAAGACTGTATTGATGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GTAAAGCGGGTTTC-ACTTG...................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...........TTTTCACTTAAGACTGTATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTTCACTTAAGACTGTATTGATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................A-AAG---------ATCACCAAA--------------------AA-----GGT.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TTTTCACTTAAGACTGTATTGATGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CACTTAAGACTGTATTGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACTTAAGACTGTATTGATGATAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGTATTGATGATAGCGAAACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATA-----------T-----------------T--GCGTGGG-GAAA-A--ATC..............................................................................................................................................................................................................................................20150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droEre2
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--GAATGAA-AAA----AAAACAACACCAAA--------------------AA-----GGTGT----AGACGAAAGTAAAGCGGTTTTC-ACTTGAT----------TTCCAAAAA----------------------------AA---TA-ATAATAATA-----------T-----------------T--GTGTGGG-GATA-A--CAATTTGCTATTCCAGTAAAATAATGAACTCTT---------------------CGATTTTTA-AAA-------------------CAATGCT-------G--------------------------------------------ACTTT-----------------A------------------------CGTATTTCCTTCCCTCG---------------------TAAAACTCATTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................AAGACTGTATTGATGATAGCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
......................GACTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................ACTTAAGACTGTATTGATGATAGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
..........................GTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................................................................................................................................................................................................................A-ATAATAATA-----------T-----------------T--GTGTGGG-GAT......................................................................................................................................................................................................................................................2211.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCCTTCCCTCG---------------------TAAAACTC...2411.0010000100
droYak3
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--AAGTGATAAAA-------ACATCACCAAA--------------------AA-----AGTGTTGT-AGACGAAAGTAAAGCGGTTTTC-ACTTGAT----------TTAAAA-------------------------------AA------GTAATAATA-----------T-----------------T--GTGTGGG-GATA-------TTTGCTATTCCAGGGAAATTATGCAATTCT---------------------AGATTTTCA-AAA-------------------GAATGCT-------GAC------------T---------------GT------------ATTTT-----------------A------------------------CGTGTCCGCCTCCCTCA---------------------TAAAACTCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................GTTGT-AGACGAAAGTAAAGC................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................GATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................ATAAAA-------ACATCACCAAA--------------------AA-----AGT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
........................................................................................................................................................................................................................................................GTAATAATA-----------T-----------------T--GTGTGGG-GAT......................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTT-----------------A------------------------CGTGTCCGCCTCCC...................................2011.00100100000000
.......................................................................................................................................................................................................................................................................................................................GCTATTCCAGGGAAATTATGC......................................................................................................................................................................................................................2111.00100000010000
............................ATTGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........................GTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
droEug1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAG--AAATTTA-AAG-------TTATCACCTTAAAA-----------------AG-----GGTGTTTTTTGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------GATAAA-------------------------------AA---T--GT---------------------------------------------------------------------------------------------------ATAACTTGCTAGATT---AG-A----------------AAA----------------------------------------------------------------------------------A------------------------CATTTCTGCTATCTTTAT--TC-----------------AACACTTATTSizeHit CountTotal NormTotal
No Reads
droBia1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCAAACCA-----------C------------TAA--GACTGC--AAA-------CCATCATCAC---------------------AA-----GGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TGTAAT-------------------------------GA---TC-GCATAAATG-----------T-----------------T--GTATGGA-GCTATA--CAATTTGCTT-----------------AATGCT---------------------AGTTT---AG-A----------------AAACCAATGCT-------CGC------------T---------------GC------------ATTTT-----------------G--------TT-----------------TTTTGATTTCCTCT-TT--TT--------------AACACTTCATTSizeHit CountTotal NormTotal
No Reads
droTak1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-ACCA-----------A------------TAA--GATTGA--AAA-------CCATCACCAGA--------------------AA-----TGTGTTTT-TGGCGAAAGTTAGGCGGGTTTC-ACTTGAT----------TACAAT-------------------------------AA---TC-ACATTTATA-----------T-----------------TTTATGTGGG-AGTATG--CATCTCGCTT----------------------------------------------ATC---AG-AATTAAACATCCTAAAAAAACCAATGCT-------AAC------------T---------------GC------------ATTTT-----------------A------------------------------------------------------------------TACTATTSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCTT-----------C------------CA----------------------------------------------------AA-----GGTGTTTT-CGGCGAACGTTAAGCGGGTTTC-ACTTGAC----------TAAAAA-------------------------------AA---AT-ACTTAA--------GCTATAAAATAACTAACTTCCTTGAAA---------A------------------------AAAC-----ATTACA---------------------AGATT---TG-A----------------AAACCAATGATCAAA------------ACAAACG---------------GCCATTTAAACTGCAATGCAATGCATGTGAGAGAACATTTTAAAGTT-----------------TTTTAT-----------TTTT--------------CACATTTTTCASizeHit CountTotal NormTotal
No Reads
droRho1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCT-TTCT-----------C------------CAA--GAACGAA-AAAATAAAAATCAACACCAA---------------------AA-----GGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAC-------------------------------AA---AT-ACATTA--------GTTTCAT-----------------T-----------ATA-GC-------------------------------ATT---------------------AGATT---AA-A----------------ATTCCGATGCT-------CAA------ACAACCA---------------GC------------ATTCT-----------------TCTTTA-----------------------TATTTTTCTAT-----TT----------------TACACCTATTASizeHit CountTotal NormTotal
No Reads
droFic1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCA-----------C------------CAA--GAATGAA-AAA-------CCATCACCAA---------------------AA-----TGTGTTTT-TGGCGAAAGTAAAGCGGGTTTC-ACTTGAT----------TAAAAA-------------------------------AA---TA-ACATTTTCA-----------C-----------------T--TTATGGGAGCAA-A--CCAGATGCTAAGACAGTAAA-------------------------------------------T-A----------------AAAAGA----------------------------TTATGCTAAGTGCAA------------------------------------------TTGTTTTTACTGCATTACAAATTTCTGCTTCCCTCAT--TT----------------CACATTTTTTGSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGT--GGCA-TCCT-----------C------------TTC--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGC--TGCC-ACGGCCCGGCTCCTAC------------T-A--TCCTAC--TTA-------CTATCAACAAAAAC---------------------------------AAACTAAAGTTCGA----------------GCGGATTTCA------CAAGATGATAGTTGATTTTTGTTTAGAGA--TTTAATTTCTATATATA-----------T-----------------A--GAGTGGG-CGTA-A--CAGCTTTTTT----------------------------------------------ATT---CG-TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GACTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................TTTTGTTTAGAGA--TTTAATTTCT........................................................................................................................................................................................................................................................................................................2311.001010000
...............................GATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
droBip1
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTGC--TGCG-GACGAAAG-------C-AAACTATATTTCAAACAAATATA--------------------------------------------------------------------AGAGTGGATTTT-ACAAGAT----------GAAGAT----TTAATATTTGA--------------AT-----------------------------------------------------------------------------------------------TTTGG----------------------CTTTTA-AA--------------------------------------------------TCTTGCCAAG----------------------------------------------------------------------TCCG-------CT-CT--TTAAAACGTCTCTACAAGAATCTCATTSizeHit CountTotal NormTotal
No Reads
dp5
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCAAAACAACTTGTAAGTGT--GGCA-TTCT-----------T------------CAAACAAATGGA-AAA-------CTATCAACACAACGAAACTGAATTCTTTTCGTATTCTTTGTATTTT-TGATGAGGTATGAACGGAT--C-A--------------------------TTGATATCTTA--------------AT-----------------------------------------------------------------------------------------------GATGGTTAAAATGTCCAAGCGACT-----------------------------------------------------------------------------GC-----------------------------------------------------GTTGAAAATTT------------------------------------GTTTCATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................TAAGACTGTATTGATGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
................ACTTAAGACTGTATTGATGATAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............TTTCACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................GTATTTT-TGATGAGGTATGAACG...............................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
droPer2
GCGCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCAAAACAACTTGTAAGTGT--GGCA-TTCT-----------T------------CAAACAAATGGA-AAA-------CTATCAACACAACGAAAGTGAATTCTTTTCGTATTCTTTGTATTTT-TGATGAGGTGTGAACGGAT--C-A--------------------------TTGATATCTTA--------------AT-----------------------------------------------------------------------------------------------GATGGTTAGAATGTCCAAGCGACT-----------------------------------------------------------------------------GC-----------------------------------------------------GTTGAAAATTT------C------------------------------TTTCATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................GAGGTGTGAACGGAT--C-A--------------------------TTGATATCTT...................................................................................................................................................................................................................................................................................................................................2713.003300000
............TTTCACTTAAGACTGTATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
GCGCCCGTAAATTTTCACTTAAGACTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
...............CACTTAAGACTGTATTGATGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............CACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........ATTTTCACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........ATTTTCACTTAAGACTGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droWil2
GCTCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTTCCTGAAA-TTAA-----------T------------CCG--AAATCGA-A-----------ATCACTTTA-------------------GAA-----TTTGTTGT----------TTAAGCGGATTTCGAGTTGAA----------AATAA-----------------------------------------TAATAGTATACGC------C---------------A-G--TTGTGGT--ATA-ACAAAACTTGAAA-TCCGTTTAA-TTA-AAAATTTT-----------------------TTTTTTC-AAA-----------------CCGAACA-----------------------------------------T------------AAATT-----------------A------------------------CATTTT-----CAAA-----TT----------------AAAGTGTCTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................CTGTATTGATGATAGCGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300120
..........ATTTTCACTTAAGACTGTATTGATGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00220000
...............................................................................................................................................................TGT----------TTAAGCGGATTTCGAGTTGAA----------.......................................................................................................................................................................................................................................................................................................................................................2411.00100100
............TTTCACTTAAGACTGTATTGATGATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.........AATTTTCACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................TTAAGACTGTATTGATGATAGCGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..............................................................................................................................................................................................................................................................GTATACGC------C---------------A-G--TTGTGGT--........................................................................................................................................................................................................................................................1811.00100010
........................CTGTATTGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
droVir3
GCTCCCGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTGTAAGTTT--ATTT-AAAACGCA-------AT-----------GCG--AAA--AA-A-----------ATTAC-------------------------G-----TTTGTTTT-TGGGCGAGTTAGCGCGGATTTC-ACATGGC----------GCCAAT---------------------------------------------------------------TGCTTGATTGCTTGATT----------------------------------ATGTAGCACAGTTTT---------------------AAATG---TG-T-------------ATAA---CAGTGTTCAGTGATCGCTGACTCACTGAGG---------------GACATGTCTGTGGCACTGT--------------------------------------------------C---------------------------------CTCTCTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................TTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................T-TGGGCGAGTTAGCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................G-T-------------ATAA---CAGTGTTCAGTGAT.............................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
....................AAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TTTGTTTT-TGGGCGAGTTAGCGCGGAT............................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..TCCCGTAAATTTTCACTTAAGACTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............TTTCACTTAAGACTGTATTGATGATAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GACTCACTGAGG---------------GACATGTCTGT...................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................TAGCGCGGATTTC-ACATGGC----------GCCAAT---------------------------------------------------------------TG................................................................................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TGATTGCTTGATT----------------------------------ATGTAGCACAGTTT.................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................TGTTTT-TGGGCGAGTTAGCGCGGAT............................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
........................CTGTATTGATGATAGCGAAACAACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................CTGTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................T-TGGGCGAGTTAGCGCGGATTTC-ACATG...................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
.........................TGTATTGATGATAGCGAAACAACTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..........................GTATTGATGATAGCGAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............TTTCACTTAAGACTGTATTGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
GCGGCAGACGTTTCACTTTGAAGAGCGTACTACTGATAGCTATACAATTAGTAAGTAC--AACC-AATA-----------C------------CAC--AACTCAA-AAA---------AAAAAAAAA--------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................AAGAGCGTACTACTGATAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................AACTCAA-AAA---------AAAAAAAAA--------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------21200.051100000
droGri2
GCGGCAGACGTTTCACTTTGAAGAGCGTACTACTGATAGCTATACAATTAGTAAGTAC--AACC-AAAAACCA-------C------------CCA--CACCAC---------------------------------------------------------------------------------------------------CACAAC---------------------------------------------------------------CACCAAACCACCCACAA----------------------------------AAATACTACAAAAAA---------------------AAAAA---AG-A-------------AAAA---AAATAAT------------------------------------------------------------------------------------------------------------------------------------------AAGAACCACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............ACTTTGAAGAGCGTACTACTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
.............CACTTTGAAGAGCGTACTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 08:42 AM