ID:

dsi_14327

 Coordinate:

3r:16389299-16389448 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.6 -7.2

Flybase annnotation

CDS [3r_16388221_16390812_+]; exon [3r_16388207_16390812_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
CCAGTTCACCGATTGTCAGAACTCTCAATGCGACCCCAATACCTCTTTCCGTTCTAGGAAAGTGAGCGTTAAGGGTCACGAGGAGTTTTGCGACTGTGATGCTTCTGATAACTTCTCCGAACTGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGCAGTTGCCTGTGCAACGACGATGCAGATCCTCCGAAGGAACCCGAAAACGCTACGTGTGTCAGCAAGCAATGCCAG
****************************************************************************....((((((.((((....)))).))))))..............................****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
......CACCGATTGTCAGAACTCTCAATGC........................................................................................................................................................................................................................... 25 0 1 8.00 8 6 2 0 0 0 0 0 0 0 0
.....TCACCGATTGTCAGAACTCTCAATGC........................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....TCACCGATTGTCAGAACT................................................................................................................................................................................................................................... 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................TTCCGTTCTAGGAAAGTGAGCGTTAAGG................................................................................................................................................................................ 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
...............TCAGAACTCTCAATGCGACCC...................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
....TTCACCGATTGTCAGAACTCTCAATGC........................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................ACGATGCAGATCCTCCGAAG....................................... 20 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0
............................................................................CACGAGGAGTTTTGCGACTGT......................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................................................................................CTCCGAACTGTCCGATCCCATC.................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CAGGAGTCTTTCCGGGGGCAGC........................................................................ 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................CCGTTCTAGGAAAGTGAGCGTTAAGG................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................GAGGAGTTTTGCGACTGTGATGCTTT................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................CTCAATGCGACCCCACTACCT.............................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
...............................................................................GAGGAGTTTTGCGACTGTGATGCT................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...GTTCACCGATTGTCAGAACTCT................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................CGAGGAGTTTTGCGACTGTGATGC.................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................ACTGTGATGCTTCTGATAACT......................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....TCACCGATTGTCAGAACTCTCAAT............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GGGGGCAGTTGCCTGTGCA.............................................................. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................................TTTCCGTTCTAGGAAAGTGAGCGTTAAG................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................ACTTCTCCGAACTGTCCGATCCCATCC................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................CAACGACGATGCAGATCCTCCGAAGG...................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................TCCGTTCTAGGAAAGTGAGCGTTAAGG................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......ACCGATTGTCAGAACTCTCAATGC........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......CACCGATTGTCAGAACTCTCAA.............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................ACATACGCACAGGAGTCTTTCCGGGGGC........................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGACGATGCAGATCCTCCGAAGG...................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................CGTTCTAGGAAAGTGAGCGTTAAGG................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................CGAGGAGTTTTGCGACTGTGATGCTTCT................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGATCCTCCGAAGGAACCCGAAAAC........................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......CACCGATTGTCAGAACCCT................................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GTTGCCTGTGCAACGACGATGCAGAT................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................CAATGCGACCCCAATACCC.............................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGACGATGCAGATCCTCCGAAGGAACCC................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GAAGGAACCCGAAAACGCT........................ 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................................................................................................................TCTCCGAACTGTCCGATCCCATCCAGACC............................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..AGTTCACCGATTGTCAGAACTCT................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................CAGAACTCTCAATGCGACC....................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....TCACCGATTGTCAGAACTCTC................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................TTCCGTTCTAGGAAAGTGAGC....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................TCTTTCCGGGGGCAGTTGCCTGTGC............................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................................GTCACGAGGAGTTTTGCGACTGT......................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................CACGAGGAGTTTTGCGACT........................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGACGATGCAGATCCTCCGAAGGA..................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................TTTGCGACTGTGATGCTTCT................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................AGGAGTTTTGCGACTGTGATGCTTC................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.CAGTTCACCGATTGTCAGAAC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................TCTCCGAACTGTCCGATCCCATCCA................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....TCACCGATTGTCAGAACTCTCAATGCGAC........................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................GTTCTAGGAAAGTGAGCGTTAAG................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................................GTTCTGTGACTGTGATGC.................................................................................................................................................... 18 2 2 0.50 1 0 0 0 0 0 0 0 1 0 0
......CACCGATTGTCAGAACTCC................................................................................................................................................................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....TCGCCGATTGTCAGAACT................................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CCGAAAGAACCCGGAGACGC......................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0
..........................................................................GTCACAAGGAGTTTAGGGA............................................................................................................................................................. 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 1
..............................................................................................TGTGACGCTTCTGAC............................................................................................................................................. 15 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGTCAAGTGGCTAACAGTCTTGAGAGTTACGCTGGGGTTATGGAGAAAGGCAAGATCCTTTCACTCGCAATTCCCAGTGCTCCTCAAAACGCTGACACTACGAAGACTATTGAAGAGGCTTGACAGGCTAGGGTAGGTCTGGTCAGAAGTATGCGTGTCCTCAGAAAGGCCCCCGTCAACGGACACGTTGCTGCTACGTCTAGGAGGCTTCCTTGGGCTTTTGCGATGCACACAGTCGTTCGTTACGGTC
******************************************************************************************************************....((((((.((((....)))).))))))..............................**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902009
testis
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
..................................GAGGTATGTAGAAAGGCAAGAT.................................................................................................................................................................................................. 22 3 1 3.00 3 3 0 0 0 0 0 0 0
............................AAGCTGGGGTTACGGAG............................................................................................................................................................................................................. 17 2 12 2.92 35 0 34 0 0 0 0 0 1
..................................GAGTTATGAAGAAAGGTAAGAT.................................................................................................................................................................................................. 22 3 4 1.50 6 6 0 0 0 0 0 0 0
..................................GTGTTATGAAGAAAGGCAAGAT.................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..................................GAGGTATGAAGAAAGGCAAGAT.................................................................................................................................................................................................. 22 3 2 1.00 2 2 0 0 0 0 0 0 0
..................................GAGTTATGAAGAAAGGCAAGAT.................................................................................................................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
............................AAGCTGGGGTTACGGA.............................................................................................................................................................................................................. 16 2 20 0.90 18 0 18 0 0 0 0 0 0
............................AAGCTGGGGTTACGGAGA............................................................................................................................................................................................................ 18 2 4 0.75 3 0 3 0 0 0 0 0 0
.............................AGCTGGGGTTACGGAGA............................................................................................................................................................................................................ 17 2 13 0.69 9 0 9 0 0 0 0 0 0
...............................................................................................................GAAGAGGCTTAACAGGCTACG...................................................................................................................... 21 2 2 0.50 1 0 0 0 0 1 0 0 0
..................................GGGTTATGAAGAAAGGTAAGGT.................................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0
..................................GAGTTATGGAGAAAGACGAGAT.................................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................CTTCTAGGAGGATCCCTTGG.................................. 20 3 2 0.50 1 0 0 1 0 0 0 0 0
..................................GGGTTATGAAGAAACGTAAGAT.................................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0 0 0 0
..................................GTGTTATGAAGAAAGGTAAGAT.................................................................................................................................................................................................. 22 3 3 0.33 1 1 0 0 0 0 0 0 0
..........CTAGCAGTCTTGAGACTT.............................................................................................................................................................................................................................. 18 2 6 0.33 2 0 0 0 0 0 2 0 0
....................................................................AATTCCAAGTGCTCC....................................................................................................................................................................... 15 1 7 0.29 2 0 0 0 2 0 0 0 0
................................................................................................................................................................................................GCTACGTCTAGGCCACTTCC...................................... 20 3 5 0.20 1 0 0 1 0 0 0 0 0
............................ACGCGGGGGCTATGGA.............................................................................................................................................................................................................. 16 2 11 0.18 2 0 0 0 2 0 0 0 0
............................ACGCGGGGGCTATGGAG............................................................................................................................................................................................................. 17 2 6 0.17 1 0 1 0 0 0 0 0 0
.....................................................................................................................................TAGGACTGGTCGGAAGCAT.................................................................................................. 19 3 16 0.13 2 0 0 0 0 0 0 2 0
...........................................................................................................................................................................................TGGCTGCTATGTCTAGAAG............................................ 19 3 10 0.10 1 0 0 1 0 0 0 0 0
..........................AAAAGCTGGGGTTATGGAG............................................................................................................................................................................................................. 19 3 20 0.10 2 0 2 0 0 0 0 0 0
..............................GCTGGGGTTACGGAGAT........................................................................................................................................................................................................... 17 2 11 0.09 1 0 1 0 0 0 0 0 0
..................................................................TCAATTCCCAGTGCCCC....................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................TCAAGGAGCCTTCCTTG................................... 17 2 13 0.08 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................TGTGCTGCTACGTCTGGGA............................................. 19 3 15 0.07 1 0 1 0 0 0 0 0 0
..................................................................TCAATTCCAAGTGCTCCAC..................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................CTGCTGCTACTTGTAGGAG............................................ 19 3 17 0.06 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................CAGAAAGGCCCGCGATA........................................................................ 17 3 20 0.05 1 0 0 1 0 0 0 0 0
....AAGGGGCTAACTGTCTTGC................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:16389249-16389498 + dsi_14327 ----CCAGTTCACCGATTGTCAGAACTCT------------------CAATGCGACCCCAATACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAC---GAGGAGTTTTGCGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGCAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAACG-------------------CTACGTGTGTCAGCAAGCAATGCCAG
droSec2 scaffold_0:17254601-17254850 + ----CCAGTTCACCGATTGTCAGAACTCT------------------CAATGCGACCCCAATACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAC---GAGGAGTTTTGCGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGCAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAACG-------------------CTACGTGTGTCAGCAAGCAATGCCAG
dm3 chr3R:4602357-4602606 - ----CCAGTTCACCGATTGTCAGAACTCT------------------CAAGGCGACCCCAGTACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAG---GAGGAATTTTGTGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGTAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAAGG-------------------CTACGTGTGTCAGCAAGCAGTGCCAG
droEre2 scaffold_4770:16983860-16984109 + ----CCAGTTCAACGATTGTCAGAACTCG------------------CAAGTCGACCCCAGTCCCTCTGCGCGT------TCCAGGAAGGTGAGCGTTAAGGGTCAC---GAAGAGTTTTGCGACTGTGATGCTTCTGATAACGACTCCGAGT------------------------------TGTCCGATCCAATCCAGACCAGTCTTCATACGCACAGGAGTCTCTCCGGGGGTAGTTGCCTGTGCA---AA---------GGCGACGCAACTCCTC------CGGAGGAACCCGCAAAGC-------------------TAACGTGTGTCAGCAAGCAATGCCAG
droYak3 3R:8663890-8664127 - ----CCAGTTCAACGATTGTCAGACCTCT------------------CAGTTCGACCCCAGTCCCTCTTCCCGT------TCTAGGAA------------GGGTCGC---GATGAGTTTTGCGACTGTGATGCTTCTGATAACGACTCCGAAT------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTCTCCGGTGCTAGTTGCCTGTGCA---AA---------GGCGATGCCACTCCAC------CGGAGGAACCCGCAAAGT-------------------TAACGTGTGTCAGCAAGCAATGTCAG
droEug1 scf7180000409490:121280-121532 + ----CGAGTTTGACAATAACCAGACATCA------------------CAATGCAATCCCAGTGTCTCTTTCCGT------TCTAGGAAAGTGAGCCTGAAAGACTATGATGAGGAGTTCTGTGACTGCGATGCTTCCGATAGGTCCTCCGATT------------------------------TGTCGGATCCCATCCAGACCAGTCTCCATACGCATAGAAGTCTCTCTGGCGGTAGCTGTCTTTGCG---AT---------GACGATGACCCTCCTC------CGGATGATCCCTCTAAGT-------------------CGGCCTGCGTTACTAAGAACTGCCAG
droBia1 scf7180000302402:7312851-7313103 - ----CCAGTTCAAGGATTGCCACTCAGCT------------------CCATGCCAGCCCAGTGGCTCTACTCGT------TCGAGAAAAGTAAGCCTGAAGGACCAAAGAGGGGAGTTCTGTGATTGTGATGAGTCCGATGGTTCCTCCGACT------------------------------TGTCAGATCCCATCCAGACCAGTCTCCACACCCACCGAAGTCTCTCCGGCGGCAGTTGTCTGTGCA---AT---------GATGATGATCCTCCTG------GCCAGGATCCCGCCGAGT-------------------CGACGTGTGTGAGCAAGGAGTGCCAG
droTak1 scf7180000414009:223634-223874 + ----ACAGTTCGAGGATTGCCAG------------------------------GAGCCCGGTGCCTCTTTCCGT------TATAGGAAAGTGAGCATGAAGGATCACGAAGGAGAGTTCTGCGACTGTGATGATTCGGACAAGTCCTCCGATC------------------------------TTTCCGATCCCATCCAGACCAGTCTCCACACGCACCGGAGTCTCTCGGGCGGCAGTTGCCTCTGCA---AT---------GACGATGAGCCTCCTG------GCCAGGATCCCTCGAAAT-------------------CAGAGTGTGTGAGTAAGGAGTGCCAA
droEle1 scf7180000491212:1196556-1196799 + ----CCAGTTCGAGGAATTCCAGACATCC------------------CAATGTGGCCCCAGTAACTCATTCCGC------TCTAGGAAAGTGAGCCTCAAATCGCAT---GAGAAGTTCTGTGACTGCGA---------CAAGTCCTCCGAAT------CCG---------------------ATTCCAGTCTCATCGAGACCAGTCTGCACACCCACAGAAGTCTCTCTGGCGGCAGTTGCCTGTGCA---AT---------GACGATGAACCCCCTC------CGGAGGATCTCTCTAAGT-------------------CACCGTGTGTTAACAGGGAATGCCAG
droRho1 scf7180000779904:9470-9719 + ----CCAGTTCGAGGAGTACCAGACATCC------------------CAATGTGACCCCAGTGCCTCTTTCCGT------TCTAGGAAAGTTAGCCTAAAGGACCAT---GAGAAGTTCTGTGACTGCGG---------CAAGTCCTCCGAATCCGAATCCG---------------------ACTCCGATCCCATCCAGACCAGTCTCCACACGCACAGAAGTCTCTCCGGCGGCAGTTGCCTGTGCA---AT---------GGCGATGAACCACCTC------CAGAGGATCTCTCCCAGT-------------------CGCCGTGTGTTCACAAAGAGTGCCAA
droFic1 scf7180000454106:2566763-2567019 + AGTCGCAGTTCGACGACTGCCAGACATCG------------------CAGGGCGGTCGCAGTGCCTCGTTCCGA------TCGCGGAAGGTGAACCTCAGGGATCACAGGGAGGAGTTCTGCGACTGCGACGCCTCCGACGGGTCCTCCGAAG------------------------------ACTCGGATCCCATCCAGACGAGCCTCCACACGCACAGAAGCCTCTCCGGCGCCAGTTGCCTTTGCG---AC---------GAGGACGAACCCGTGC------CGGAGGATCCCGCGCAGT-------------------CGTCCTGTGTCCACAAGGAGTGCCAG
droKik1 scf7180000302247:291995-292293 + ----GCAGTATATTGAAGCCGACCTCTCGGAGTGTGACACCAGGTTGCAGAACGAACCCAGCCACGCCTCGCGGATACCAAAGAGGAGGGTTAGCATGACCCAGAACGAGGAAGAATTCTGCGACTGTTATTCGCCG---------TCCACAC------AGAGTTGCACTTGCCTGCCGCAGAGATCTGATCACATCCTGACCAGCATCCACTCGCACCGAAGCCTCTCCGGCGGTAGTTGCATGTGCA---AGCCCAGCGATTCAGACGAC---------------------------CAGTCGCCCTATGCTCCCGCAGACACCCAGGCCCAGAAAGCTTTAACCG
droAna3 scaffold_13340:11011736-11011875 - ----A--------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CGTCCGACTGTATTATAACCAGCTTAAAGACGCACCGGAGTATTTCCGGCGGTAGTTGCATGTGCGATAA---GGACGAAGATGAAGATCCACCTG------CTGGGGATCTGTCCCAGT-------------------CAGCGTGCGTTTTGAAGGACTGCAAG
droBip1 scf7180000396374:70907-71046 + ----A--------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CGTCCGACTGTATTGTCACCAGTCTGAAGACGCATCGGAGCCTTTCCGGTGGCAGTTGCATGTGCGGCAAT---------GGAGATGATCCTCCTGTCCCACCTGGCGACCTGTCCCAGT-------------------CGGCGTGCGTCTTGAAGGACTGTAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
----CCAGTTCACCGATTGTCAGAACTCT------------------CAATGCGACCCCAATACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAC---GAGGAGTTTTGCGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGCAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAACG-------------------CTACGTGTGTCAGCAAGCAATGCCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........CACCGATTGTCAGAACTCT------------------CAATGC.......................................................................................................................................................................................................................................................................................................2518.00802600000000000000
.........TCACCGATTGTCAGAACTCT------------------CAATGC.......................................................................................................................................................................................................................................................................................................2614.00400400000000000000
.........TCACCGATTGTCAGAACT.................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
....................................................................TTCCGT------TCTAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2812.00200020000000000000
...................TCAGAACTCT------------------CAATGCGACCC..................................................................................................................................................................................................................................................................................................2112.00220000000000000000
........TTCACCGATTGTCAGAACTCT------------------CAATGC.......................................................................................................................................................................................................................................................................................................2712.00220000000000000000
........................................................................................................................................................................................................................................................................ACGATGCAGATCCTC------CGAAG..........................................................2012.00200011000000000000
........................................................................................................CAC---GAGGAGTTTTGCGACTGT............................................................................................................................................................................................................................2112.00202000000000000000
.................................................................................................................................................CTCCGAAC------------------------------TGTCCGATCCCATC.......................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................CAGGAGTCTTTCCGGGGGCAGC.............................................................................................................2211.00100100000000000000
......................................................................CCGT------TCTAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2611.00100010000000000000
..............................................................................................................GAGGAGTTTTGCGACTGTGATGCTTT....................................................................................................................................................................................................................2611.00100100000000000000
..............................................................................................................GAGGAGTTTTGCGACTGTGATGCT......................................................................................................................................................................................................................2411.00110000000000000000
.......GTTCACCGATTGTCAGAACTCT------------------.............................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................C---GAGGAGTTTTGCGACTGTGATGC.......................................................................................................................................................................................................................2411.00101000000000000000
...........................................................................................................................ACTGTGATGCTTCTGATAACT............................................................................................................................................................................................................2111.00110000000000000000
.........TCACCGATTGTCAGAACTCT------------------CAAT.........................................................................................................................................................................................................................................................................................................2411.00101000000000000000
......................................................................................................................................................................................................................................GGGGGCAGTTGCCTGTGCA---................................................................................................1911.00100000000001000000
...................................................................TTTCCGT------TCTAGGAAAGTGAGCGTTAAG.......................................................................................................................................................................................................................................................2811.00100010000000000000
.............................................................................................................................................ACTTCTCCGAAC------------------------------TGTCCGATCCCATCC......................................................................................................................................................2711.00100100000000000000
.......................................................................................................................................................................................................................................................CA---AC---------GACGATGCAGATCCTC------CGAAGG.........................................................2611.00101000000000000000
.....................................................................TCCGT------TCTAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2711.00100010000000000000
...........ACCGATTGTCAGAACTCT------------------CAATGC.......................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........CACCGATTGTCAGAACTCT------------------CAA..........................................................................................................................................................................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................................................................................................................C---------GACGATGCAGATCCTC------CGAAGG.........................................................2311.00110000000000000000
.......................................................................CGT------TCTAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................C---GAGGAGTTTTGCGACTGTGATGCTTCT...................................................................................................................................................................................................................2811.00101000000000000000
...............................................................................................................................................................................................................................................................................AGATCCTC------CGAAGGAACCCGAAAAC..............................................2511.00100001000000000000
.............................................................................................................................................................................................................................................GTTGCCTGTGCA---AC---------GACGATGCAGAT.........................................................................2611.00100100000000000000
...............................................CAATGCGACCCCAATACCC..........................................................................................................................................................................................................................................................................................1911.00100100000000000000
.............................................................................................................................................................................................................................................................C---------GACGATGCAGATCCTC------CGAAGGAACCC....................................................2811.00100100000000000000
..............................................................................................................................................................................................................................................................................................GAAGGAACCCGAAAACG-------------------CT........................1911.00100001000000000000
................................................................................................................................................TCTCCGAAC------------------------------TGTCCGATCCCATCCAGACC.................................................................................................................................................2911.00101000000000000000
......AGTTCACCGATTGTCAGAACTCT------------------.............................................................................................................................................................................................................................................................................................................2311.00100100000000000000
....................CAGAACTCT------------------CAATGCGACC...................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.........TCACCGATTGTCAGAACTCT------------------C............................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................TTCCGT------TCTAGGAAAGTGAGC.............................................................................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................................................................................................................................TCTTTCCGGGGGCAGTTGCCTGTGC....................................................................................................2511.00100010000000000000
......................................................................................................GTCAC---GAGGAGTTTTGCGACTGT............................................................................................................................................................................................................................2311.00101000000000000000
........................................................................................................CAC---GAGGAGTTTTGCGACT..............................................................................................................................................................................................................................1911.00101000000000000000
.............................................................................................................................................................................................................................................................C---------GACGATGCAGATCCTC------CGAAGGA........................................................2411.00101000000000000000
.....................................................................................................................TTTGCGACTGTGATGCTTCT...................................................................................................................................................................................................................2011.00100100000000000000
...............................................................................................................AGGAGTTTTGCGACTGTGATGCTTC....................................................................................................................................................................................................................2511.00100100000000000000
.....CAGTTCACCGATTGTCAGAAC..................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................................................................................................................................................TCTCCGAAC------------------------------TGTCCGATCCCATCCA.....................................................................................................................................................2511.00100100000000000000
.........TCACCGATTGTCAGAACTCT------------------CAATGCGAC....................................................................................................................................................................................................................................................................................................2911.00100100000000000000
........................................................................GT------TCTAGGAAAGTGAGCGTTAAG.......................................................................................................................................................................................................................................................2311.00100010000000000000
..........CACCGATTGTCAGAACTCC------------------.............................................................................................................................................................................................................................................................................................................1920.50100100000000000000
droSec2
----CCAGTTCACCGATTGTCAGAACTCT------------------CAATGCGACCCCAATACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAC---GAGGAGTTTTGCGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGCAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAACG-------------------CTACGTGTGTCAGCAAGCAATGCCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................ATACGCACAGGAGTCTTTCCGG....................................................................................................................2211.0010001
...................................................................................................................GTTTTGCGACTGTGATGCTTCTGAT................................................................................................................................................................................................................2511.0010100
......................................................................CCGT------TCTAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2611.0010010
...................................................................................................................GTTTTGCGACTGTGATGC.......................................................................................................................................................................................................................1811.0010010
.....................................................................................................................TTTGCGACTGTGATGCTTCTG..................................................................................................................................................................................................................2111.0010010
..........CACCGATTGTCAGAACTCT------------------CAATGC.......................................................................................................................................................................................................................................................................................................2511.0010010
.....................................................................................................................................................................................................................................................................................................CCCGAAAACG-------------------CTACGTGTG.................1911.0010010
.............................................................................................................................................ACTTCTCCGAAC------------------------------TGTCCGATCCCA.........................................................................................................................................................2411.0011000
............................................................................................................................................................................................................................................................................................................ACG-------------------CTACGTGTGTCAGCAAGCA.......2211.0010100
.................................................................................................................................................................................................................CATACGCACAGGAGTCTTTCCGG....................................................................................................................2311.0010001
........................................................................................................CAC---GAGGAGTTTTGCGACT..............................................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................................................................................AGTCTTTCCGGGGGCAGTTGCCTGTG.....................................................................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................AACG-------------------CTACGTGTGTCAGC............1811.0010010
dm3
----CCAGTTCACCGATTGTCAGAACTCT------------------CAAGGCGACCCCAGTACCTCTTTCCGT------TCTAGGAAAGTGAGCGTTAAGGGTCAG---GAGGAATTTTGTGACTGTGATGCTTCTGATAACTTCTCCGAAC------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTTTCCGGGGGTAGTTGCCTGTGCA---AC---------GACGATGCAGATCCTC------CGAAGGAACCCGAAAAGG-------------------CTACGTGTGTCAGCAAGCAGTGCCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................GAACCCGAAAAGG-------------------CTACGTGTGTCA..............2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGTGACTGTGATGCTTCTGAT................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TAGTTGCCTGTGCA---AC---------GACGATGCA............................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGTGCA---AC---------GACGATGCAGA..........................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................GACTGTGATGCTTCTGATA...............................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCATCCAGACCAGTCTTCATAC......................................................................................................................................2212.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TACGTGTGTCAGCAAGCAGTGCCA.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AGGAGTCTTTCCGGGGGTAGT.............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................TGTGATGCTTCTGATAAC.............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GAACCCGAAAAGG-------------------CTACGTGTGTCAG.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCACCGATTGTCAGAACTCT------------------CAAGGC.......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TAAGGGTCAG---GAGGAATTTTGTGAC...............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TAAGGGTCAG---GAGGAATT......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................GAATTTTGTGACTGTGATGCTT.....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GTCAG---GAGGAATTTTGTGACTGTGAT.........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................A---AC---------GACGATGCAGATCCT......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................AGGAATTTTGTGACTGTGA..........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................AGTACCTCTTTCCGT------TC..........................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GAAC------------------------------TGTCCGATCCCATCCA.....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GCAGATCCTC------CGAAGGAA.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGG-------------------CTACGTGTGTCAGCAAGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCCGGGGGTAGTTGCCTGTGCA---................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................GTGAGCGTTAAGGGTCAG---GATC..........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAAGTGAGCGTTAAGGGTCAG---GAGGAAT.......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GAAAAGG-------------------CTACGTGTGTCAGCAAGC........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTCCGT------TCTAGGAAAGTGAGCGTT..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATTGTCAGAACTCT------------------CAAGGCGACCCC.................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CT------------------CAAGGCGACCCCAGTACCTCT........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GATCCTC------CGAAGGAACCC....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCATCCAGACCAGTCTTCATACGCA...................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGAGCGTTAAGGGTCAG---GATC..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCA---AC---------GACGATGCAGATCCTC------CGA............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................C------CGAAGGAACCCGAAAAGG-------------------CT........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CCTC------CGAAGGAACCCGAAAAGG-------------------CT........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................GATGCAGATCCTC------CGAAGGAA.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TACGCACAGGAGTCTTTCCGGG...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GG-------------------CTACGTGTGTCAGCAAGCAG......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGTGAGCGTTAAGGGTCAG---GAGGAAT.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GAGCGTTAAGGGTCAG---GAG...........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CGTTAAGGGTCAG---GAGGA.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................TGCCTGTGCA---AC---------GACGATG..............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................AAAGTGAGCGTTAAGGGTCA..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..................................................................................TAGGAAAGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATTGTCAGAACTCT------------------CAAGGCGACCCC.................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGGGTCAG---GAGGAATTTTGTGACT..............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................AAC------------------------------TGTCCGATCCCATCCAGACC.................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ATAACTTCTCCGAAC------------------------------TGTCC................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...........ACCGATTGTCAGAACTCT------------------CAAGGCGA.....................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CCATCCAGACCAGTCTTCAT........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CT------------------CAAGGCGACCCCAGTACCTCTTT......................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CCAGTCTTCATACGCACAGGAGT............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................TTTGTGACTGTGATGCTTCTGATAACT............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCACCGATTGTCAGAACTCT------------------.............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CCCAGTACCTCTTTCCGT------TCTAGGA.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCAG---GAGGAATTTTGTGACT..............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGG-------------------CTACGTGTGTCAGCA...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTTCCGGGGGTAGTTGCCTGTGC....................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CCAGACCAGTCTTCATACGCACA.................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AGATCCTC------CGAAGGAACCCGA..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TGTCAGCAAGCAGTGCCAG1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAGTGAGCGTTAAGGGTCA..................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................GACCAGTCTTCATACGCAC..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CACCGATTGTCAGAACTCT------------------.............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TGTGACTGTGATGCTTCT...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AGTCTTTCCGGGGGTAGT.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
----CCAGTTCAACGATTGTCAGAACTCG------------------CAAGTCGACCCCAGTCCCTCTGCGCGT------TCCAGGAAGGTGAGCGTTAAGGGTCAC---GAAGAGTTTTGCGACTGTGATGCTTCTGATAACGACTCCGAGT------------------------------TGTCCGATCCAATCCAGACCAGTCTTCATACGCACAGGAGTCTCTCCGGGGGTAGTTGCCTGTGCA---AA---------GGCGACGCAACTCCTC------CGGAGGAACCCGCAAAGC-------------------TAACGTGTGTCAGCAAGCAATGCCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................GACGCAACTCCTC------CGGAGGA........................................................2013.0031000110
........................................................................GT------TCCAGGAAGGTGAGCGT...........................................................................................................................................................................................................................................................1912.0020000020
....................................................CGACCCCAGTCCCTCTGCGC....................................................................................................................................................................................................................................................................................2012.0021000010
.................................................................................CCAGGAAGGTGAGCGTTAAG.......................................................................................................................................................................................................................................................2012.0020000110
...........................................................................................................................................................................................................................................................................................................AAGC-------------------TAACGTGTGTCAGC............1811.0010000010
..........................................................................................................................................................................................................................AGGAGTCTCTCCGGGGGTAGT.............................................................................................................2111.0011000000
..........................................................................................................................................................................................................................................................................GACGCAACTCCTC------CGGAGG.........................................................1911.0010000010
.........TCAACGATTGTCAGAACT.................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............................................CAAGTCGACCCCAGTCCCTC.........................................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................CCAGACCAGTCTTCATACGC....................................................................................................................................2011.0010100000
......................................................................................................................................................................................................................GCACAGGAGTCTCTCCGGGGGTAGT.............................................................................................................2511.0010000010
................................................................................................................................GATGCTTCTGATAACGACTCCGA.....................................................................................................................................................................................................2311.0011000000
.........................................................................................................................................GATAACGACTCCGAGT------------------------------TGTCC................................................................................................................................................................2111.0010010000
...................................................................................................................GTTTTGCGACTGTGATGCTTCTGA.................................................................................................................................................................................................................2411.0011000000
..................................................................................CAGGAAGGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................CGCAAAGC-------------------TAACGTGTGTCAGC............2211.0010000100
...............................................................................................................................................GACTCCGAGT------------------------------TGTCCGATC............................................................................................................................................................1911.0010000010
....................................................................................................................................................................................................................................................................................................ACCCGCAAAGC-------------------TAACGTGTGT................2111.0010000100
........................................................................GT------TCCAGGAAGGTGAGCGTTAAGG......................................................................................................................................................................................................................................................2411.0010010000
......................................................................GCGT------TCCAGGAAGGTGAGCGTTAAGGG.....................................................................................................................................................................................................................................................2711.0010000100
..........................................................................................................................................................................................................................................................................GACGCAACTCCTC------CGGAGGAACCCGC..................................................2611.0010000010
......................................................................................................GTCAC---GAAGAGTTTTGCGACTGTGATGC.......................................................................................................................................................................................................................2811.0010100000
.................................................................................................................................................................................................................................TCTCCGGGGGTAGTTGCCTGTGCA---AA---------G....................................................................................2711.0011000000
........................................................................................GGTGAGCGTTAAGGGTCAC---GAA...........................................................................................................................................................................................................................................2211.0011000000
..................GTCAGAACTCG------------------CAAGTCGACCCCA................................................................................................................................................................................................................................................................................................2411.0011000000
............................................................................................................................................................................................................................................................................................................AGC-------------------TAACGTGTGTCAGCAAGCAATGC...2611.0010000100
..........................................................................................................................................................................................................................................................................GACGCAACTCCTC------CGGAGGAAC......................................................2211.0010000010
...............................................................................................GTTAAGGGTCAC---GAAGAGTTTT....................................................................................................................................................................................................................................2211.0010000100
.........................................................................................................................CGACTGTGATGCTTCTGATAACG............................................................................................................................................................................................................2311.0010000100
........................................................................................................................................................................................................................................................................GCGACGCAACTCCTC------CGGAGGC........................................................2211.0010010000
............................................................................................................................................................................................................................................................................CGCAACTCCTC------CGGAGGAAC......................................................2011.0010001000
...........................................................................................................................................TAACGACTCCGAGT------------------------------TGTCCGATCC...........................................................................................................................................................2411.0010000100
.....CAGTTCAACGATTGTCAG.....................................................................................................................................................................................................................................................................................................................................1811.0010000010
.....................................................................................................................................................GAGT------------------------------TGTCCGATCCAATCCAGACCAGT..............................................................................................................................................2711.0010000100
..................................................................................................................................................................................................................................................................................................................................TAACGTGTGTCAGCAAGC........1811.0010000010
........................................................................GT------TCCAGGAAGGTGAGCGTTAAG.......................................................................................................................................................................................................................................................2311.0010000010
...................................................................................................................................................................................................................................................TGTGCA---AA---------GGCGACGCAACTCCTC------C..............................................................2511.0010100000
..........................................................................................................................................................................................................................................................................................................AAAGC-------------------TAACGTGTGTCAG.............1811.0010000010
...................................................................................................................GTTTTGCGACTGTGATGC.......................................................................................................................................................................................................................1811.0010100000
droYak3
----CCAGTTCAACGATTGTCAGACCTCT------------------CAGTTCGACCCCAGTCCCTCTTCCCGT------TCTAGGAA------------GGGTCGC---GATGAGTTTTGCGACTGTGATGCTTCTGATAACGACTCCGAAT------------------------------TGTCCGATCCCATCCAGACCAGTCTTCATACGCACAGGAGTCTCTCCGGTGCTAGTTGCCTGTGCA---AA---------GGCGATGCCACTCCAC------CGGAGGAACCCGCAAAGT-------------------TAACGTGTGTCAGCAAGCAATGTCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................GATGCCACTCCAC------CGGAGGAACCC....................................................2412.00200101000000
...........AACGATTGTCAGACCTCT------------------CAGTTCGACCC..................................................................................................................................................................................................................................................................................................2911.00110000000000
......AGTTCAACGATTGTCAGACCTCT------------------.............................................................................................................................................................................................................................................................................................................2311.00110000000000
.................................................................................................................................................................................................................CATACGCACAGGAGTCTCTCCGGT...................................................................................................................2411.00100000010000
..................................................................CTTCCCGT------TCTAGGAA------------GGGTCGC---..............................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................TTGCGACTGTGATGCTTCTGATAACG............................................................................................................................................................................................................2611.00101000000000
.........................................................................................................................................................................................................................................................................CGATGCCACTCCAC------CGGAGGAACCCG...................................................2611.00100000010000
.............................................................................................................................................................................................................................................................................GCCACTCCAC------CGGAGGAACCCGCA.................................................2411.00101000000000
.......GTTCAACGATTGTCAGACCT.................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................ATGAGTTTTGCGACTGTGATGCTTCTGAT................................................................................................................................................................................................................2911.00110000000000
.............................................................................................................................................................................................................................................................................................................GT-------------------TAACGTGTGTCAGCAAGC........2011.00100000010000
...........................................................................................................................................................................................................................GGAGTCTCTCCGGTGCTAGTTGCC.........................................................................................................2411.00101000000000
......AGTTCAACGATTGTCAGACCTCT------------------CAGT.........................................................................................................................................................................................................................................................................................................2711.00101000000000
..................................................................................................................AGTTTTGCGACTGTGATGCTTCT...................................................................................................................................................................................................................2311.00101000000000
.......GTTCAACGATTGTCAGACCTCT------------------CA...........................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................CGTGTGTCAGCAAGCAATGTC..2111.00101000000000
....................................................................TCCCGT------TCTAGGAA------------GGGTCGC---G.............................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................AGGAACCCGCAAAGT-------------------TAACGTGTGT................2511.00100000010000
....CCAGTTCAACGATTGTCAGACC..................................................................................................................................................................................................................................................................................................................................2211.00110000000000
................................................................................................................................GATGCTTCTGATAACGACC.........................................................................................................................................................................................................1911.00110000000000
..................................................................................TAGGAA------------GGGTCGC---GATGAGTTTTGC..................................................................................................................................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................GATGCCACTCCAC------CGGAGGAACCCGCA.................................................2711.00100000010000
...............................................CAGTTCGACCCCAGTCCCT..........................................................................................................................................................................................................................................................................................1911.00100010000000
.......................................................................................................................................................................................................................................................................................................CGCAAAGT-------------------TAACGTGTGTCAGC............2211.00100100000000
.......................................................................................................................................................................................................................................................................GGCGATGCCACTCCAC------CGGAGGAACCC....................................................2711.00100100000000
.................................................................................................................................................................................................CATCCAGACCAGTCTTCATACGCACAGG...............................................................................................................................2811.00101000000000
..........................................................................................................................................................................................................................................................................GATGCCACTCCAC------CGGAGGA........................................................2011.00100010000000
droEug1
----CGAGTTTGACAATAACCAGACATCA------------------CAATGCAATCCCAGTGTCTCTTTCCGT------TCTAGGAAAGTGAGCCTGAAAGACTATGATGAGGAGTTCTGTGACTGCGATGCTTCCGATAGGTCCTCCGATT------------------------------TGTCGGATCCCATCCAGACCAGTCTCCATACGCATAGAAGTCTCTCTGGCGGTAGCTGTCTTTGCG---AT---------GACGATGACCCTCCTC------CGGATGATCCCTCTAAGT-------------------CGGCCTGCGTTACTAAGAACTGCCAGSizeHit CountTotal NormTotal
No Reads
droBia1
----CCAGTTCAAGGATTGCCACTCAGCT------------------CCATGCCAGCCCAGTGGCTCTACTCGT------TCGAGAAAAGTAAGCCTGAAGGACCAAAGAGGGGAGTTCTGTGATTGTGATGAGTCCGATGGTTCCTCCGACT------------------------------TGTCAGATCCCATCCAGACCAGTCTCCACACCCACCGAAGTCTCTCCGGCGGCAGTTGTCTGTGCA---AT---------GATGATGATCCTCCTG------GCCAGGATCCCGCCGAGT-------------------CGACGTGTGTGAGCAAGGAGTGCCAGSizeHit CountTotal NormTotal
No Reads
droTak1
----ACAGTTCGAGGATTGCCAG------------------------------GAGCCCGGTGCCTCTTTCCGT------TATAGGAAAGTGAGCATGAAGGATCACGAAGGAGAGTTCTGCGACTGTGATGATTCGGACAAGTCCTCCGATC------------------------------TTTCCGATCCCATCCAGACCAGTCTCCACACGCACCGGAGTCTCTCGGGCGGCAGTTGCCTCTGCA---AT---------GACGATGAGCCTCCTG------GCCAGGATCCCTCGAAAT-------------------CAGAGTGTGTGAGTAAGGAGTGCCAASizeHit CountTotal NormTotal
No Reads
droEle1
----CCAGTTCGAGGAATTCCAGACATCC------------------CAATGTGGCCCCAGTAACTCATTCCGC------TCTAGGAAAGTGAGCCTCAAATCGCAT---GAGAAGTTCTGTGACTGCGA---------CAAGTCCTCCGAAT------CCG---------------------ATTCCAGTCTCATCGAGACCAGTCTGCACACCCACAGAAGTCTCTCTGGCGGCAGTTGCCTGTGCA---AT---------GACGATGAACCCCCTC------CGGAGGATCTCTCTAAGT-------------------CACCGTGTGTTAACAGGGAATGCCAGSizeHit CountTotal NormTotal
No Reads
droRho1
----CCAGTTCGAGGAGTACCAGACATCC------------------CAATGTGACCCCAGTGCCTCTTTCCGT------TCTAGGAAAGTTAGCCTAAAGGACCAT---GAGAAGTTCTGTGACTGCGG---------CAAGTCCTCCGAATCCGAATCCG---------------------ACTCCGATCCCATCCAGACCAGTCTCCACACGCACAGAAGTCTCTCCGGCGGCAGTTGCCTGTGCA---AT---------GGCGATGAACCACCTC------CAGAGGATCTCTCCCAGT-------------------CGCCGTGTGTTCACAAAGAGTGCCAASizeHit CountTotal NormTotal
No Reads
droFic1
AGTCGCAGTTCGACGACTGCCAGACATCG------------------CAGGGCGGTCGCAGTGCCTCGTTCCGA------TCGCGGAAGGTGAACCTCAGGGATCACAGGGAGGAGTTCTGCGACTGCGACGCCTCCGACGGGTCCTCCGAAG------------------------------ACTCGGATCCCATCCAGACGAGCCTCCACACGCACAGAAGCCTCTCCGGCGCCAGTTGCCTTTGCG---AC---------GAGGACGAACCCGTGC------CGGAGGATCCCGCGCAGT-------------------CGTCCTGTGTCCACAAGGAGTGCCAGSizeHit CountTotal NormTotal
No Reads
droKik1
----GCAGTATATTGAAGCCGACCTCTCGGAGTGTGACACCAGGTTGCAGAACGAACCCAGCCACGCCTCGCGGATACCAAAGAGGAGGGTTAGCATGACCCAGAACGAGGAAGAATTCTGCGACTGTTATTCGCCG---------TCCACAC------AGAGTTGCACTTGCCTGCCGCAGAGATCTGATCACATCCTGACCAGCATCCACTCGCACCGAAGCCTCTCCGGCGGTAGTTGCATGTGCA---AGCCCAGCGATTCAGACGAC---------------------------CAGTCGCCCTATGCTCCCGCAGACACCCAGGCCCAGAAAGCTTTAACCGSizeHit CountTotal NormTotal
No Reads
droAna3
----A--------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CGTCCGACTGTATTATAACCAGCTTAAAGACGCACCGGAGTATTTCCGGCGGTAGTTGCATGTGCGATAA---GGACGAAGATGAAGATCCACCTG------CTGGGGATCTGTCCCAGT-------------------CAGCGTGCGTTTTGAAGGACTGCAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................TGCATGTGCGATAA---GGACGAA.....................................................................................2112.002100001
..............................................................................................................................................................................................................................GTATTTCCGGCGGTAGTTGCAT........................................................................................................2212.002000002
..............................................................................................................................................................................................................................................................................................................T-------------------CAGCGTGCGTTTTGAAGGACTGC...2412.002000002
...................................................................................................................................................................................................................................TCCGGCGGTAGTTGCATGTGCGATA................................................................................................2511.001000001
......................................................................................................................................................................................................................................................................................................TGTCCCAGT-------------------CAGCGTGCGT................1911.001100000
.............................................................................................................................................................................................................................AGTATTTCCGGCGGTAGTTGC..........................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................GATGAAGATCCACCTG------CTGGG..........................................................2111.001010000
.......................................................................................................................................................................................................................................................................................................GTCCCAGT-------------------CAGCGTGCGTT...............1911.001000001
..............................................................................................................................................................................................................................GTATTTCCGGCGGTAGTTGCATGTGC....................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................GTCCCAGT-------------------CAGCGTGCGTTTTGAA..........2411.001000001
....................................................................................................................................................................................................................................................................GAAGATGAAGATCCACCTG------CTGG...........................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................GTCCCAGT-------------------CAGCGTGCGTTTT.............2111.001000001
............................................................................................................................................................................................................................................AGTTGCATGTGCGATAA---GGACGAA.....................................................................................2411.001000001
...............................................................................................................................................................................................................................................................................................GGGGATCTGTCCCAGT-------------------CAGCGTGC..................2411.001010000
droBip1
----A--------------------------------------------------------------------------------------------------------------------------------------------------AC------------------------------CGTCCGACTGTATTGTCACCAGTCTGAAGACGCATCGGAGCCTTTCCGGTGGCAGTTGCATGTGCGGCAAT---------GGAGATGATCCTCCTGTCCCACCTGGCGACCTGTCCCAGT-------------------CGGCGTGCGTCTTGAAGGACTGTAAGSizeHit CountTotal NormTotal
No Reads

Generated: 05/19/2015 at 01:11 AM