ID:

dsi_14301

 Coordinate:

3r:17335693-17335891 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.9 -15.6 -15.5 -15.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAGGTGTAGCGTCCGATTCCGATTCAGATTCCGACGATCGCGTATATCAATCGTAAAGCATTAAGCGCATTGCCCATTTACACGCAGTCCATAGGCGAAAATCGTTTGCCATTGATAAACACACGACAATTGCCGAAAATTAATATCCAAATAAATGGCCAAGCAACACAAACAAAGTGAATAAATTAGCTAACAGTGAGAATGAATAGAACCCTGCCTCACAAAATGCCGACAACACGAATTCTTAATAAA
*********************************************************************...................((......((((....(((...((((..(((((.((..((.....))..)).)))))....)))))))...))))....)).********************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR1275483
Male prepupae		 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR1275487
Male larvae		 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR618934
dsim w501 ovaries
...............AACGCATTTTCGGACGCG.......................................................................................................................................................................................................................................................................... 18 0 1 7.00 7 6 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................TTCACAGTCCGACGATC..................................................................................................................................................................................................................... 17 2 8 3.38 27 0 25 0 0 0 0 0 0 0 0 0 2 0
....................................................................ATTCACAGTCCGACGATC..................................................................................................................................................................................................................... 18 2 1 3.00 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...................................CCGAGTCGTTCCGAGGTG...................................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............GGAACGCATTTTCGGACG............................................................................................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............GAACGCATTTTCGGACGC........................................................................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TTTGCCATTGATAAACACA................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................ATTCCGACGATCGACT................................................................................................................................................................................................................. 16 2 20 1.70 34 0 0 0 0 0 28 0 0 0 6 0 0 0
...............................................GAGGTATAGCGTCCGAT........................................................................................................................................................................................................................................... 17 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..............GAACGCATTTTCGGACGCG.......................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................TTCAGATTCCGACGATCGCG.................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TAGCGTCCGATTCCGATTCAG................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................CAGATTCACAGTCCGACGATC..................................................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.CCGATATGCAACGGAACGCATTTTCGGAC............................................................................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....ATATGCAACGGAACGCATTTTCGGAC............................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........ACGGAACGCATTTTCGGACGCG.......................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................CCGAGTCGTTCCGAGGTGTAG................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................GACGCGGCCCGAGTCGTTCCGAGGT....................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................GCGGCCCGAGTCGTT.............................................................................................................................................................................................................................................................. 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................GAGTCGTTCCGAGGTGTA.................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.......TGCAACGGAACGCATTTTCGGACGC........................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............AACGCATTTTCGGACGCGGCCCGAC................................................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACAGTCCGACGATCGCGTA................................................................................................................................................................................................................ 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................GATTCCGATGATCGCGTAT............................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................CGCATTTTCGGACGCGGC........................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................AGTCCGACGATCGCGGA................................................................................................................................................................................................................ 17 2 4 0.75 3 0 0 0 3 0 0 0 0 0 0 0 0 0
........................................................................AGATTCCGACGATCGACT................................................................................................................................................................................................................. 18 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................GTCCGACGATCGCGTA................................................................................................................................................................................................................ 16 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................ATTCACAGTCCGACGATCA.................................................................................................................................................................................................................... 19 3 9 0.33 3 0 3 0 0 0 0 0 0 0 0 0 0 0
...................................................................GATTCTAAGTCCGACGATC..................................................................................................................................................................................................................... 19 3 7 0.29 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................GTTCAGAGTCCGACGATC..................................................................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACAGTCCGACGATCGCGGAT............................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................CAGTCCGACGATCGCGGATA.............................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................GAGTCACAGTCCGACGATC..................................................................................................................................................................................................................... 19 3 8 0.25 2 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................ACATTCCGACGATCGACT................................................................................................................................................................................................................. 18 3 20 0.20 4 0 0 0 0 0 0 0 0 0 4 0 0 0
..........................................................................AGTCCGACGATCGCG.................................................................................................................................................................................................................. 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................AGTCCGACGATCCCGTA................................................................................................................................................................................................................ 17 2 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................................................AGTCCGACGATCGGGTA................................................................................................................................................................................................................ 17 2 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................................AGTCCGACGATCGCGG................................................................................................................................................................................................................. 16 2 20 0.15 3 0 0 0 0 0 0 0 0 2 0 1 0 0
................................GTCCGTAGTCGTTCCGAGG........................................................................................................................................................................................................................................................ 19 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................GTTCCGTGGTGTAGCG................................................................................................................................................................................................................................................. 16 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.....................................................................TTCACAGTCCGACGATCGA................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................AGTCCGACGATCGCCTATC.............................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................AATCACAGTCCGACGATC..................................................................................................................................................................................................................... 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
....................................................................GTTCAGAGTCCGACGAT...................................................................................................................................................................................................................... 17 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................ATCCACAGTCCGACGATC..................................................................................................................................................................................................................... 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................GAGTCCGACGATCGGGT................................................................................................................................................................................................................. 17 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0
................................................AGGTATAGCGTCCGAC........................................................................................................................................................................................................................................... 16 2 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0
..........................................................................AGTCCGACGATCGCGAA................................................................................................................................................................................................................ 17 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................TGAGAGGTGTAGCGT................................................................................................................................................................................................................................................ 15 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................GTCCGACGATCCCGTA................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................ACAGTCCGACGATCCCGT................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................CTGCCTAACAAAATGTCGT.................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
....................................................................ATCTAGAGTCCGACGATC..................................................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................AGTCCGACGATCCCGTAC............................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AGGCTATACGTTGCCTTGCGTAAAAGCCTGCGCCGGGCTCAGCAAGGCTCCACATCGCAGGCTAAGGCTAAGTCTAAGGCTGCTAGCGCATATAGTTAGCATTTCGTAATTCGCGTAACGGGTAAATGTGCGTCAGGTATCCGCTTTTAGCAAACGGTAACTATTTGTGTGCTGTTAACGGCTTTTAATTATAGGTTTATTTACCGGTTCGTTGTGTTTGTTTCACTTATTTAATCGATTGTCACTCTTACTTATCTTGGGACGGAGTGTTTTACGGCTGTTGTGCTTAAGAATTATTT
*********************************************************************************************************************************...................((......((((....(((...((((..(((((.((..((.....))..)).)))))....)))))))...))))....)).********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
............................................................................................................................AATGTGCGTAAGGTAT............................................................................................................................................................... 16 1 1 1.00 1 0 1 0 0 0 0
...............ATGCTTAAAGGCCTGCGCCG........................................................................................................................................................................................................................................................................ 20 3 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................GTTTGTCACTCTTACTTG............................................. 18 2 10 0.10 1 0 0 1 0 0 0
..............................................GCGCCGCATCGCAGGC............................................................................................................................................................................................................................................. 16 2 12 0.08 1 0 0 0 1 0 0
..............................................GCTCCAGATTGCAGGCC............................................................................................................................................................................................................................................ 17 3 20 0.05 1 0 0 0 0 0 1
.......TCGTGGCCTTGCGTAACA.................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:17335643-17335941 + dsi_14301 TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATT-----------------------CAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----C------AC-AAAATGCCGACAACAC-----GAATTCTTAATAAA
droSec2 scaffold_0:18168995-18169299 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----GGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--T--AATCAAAGTGAA----------------TA-AATTA------------GTTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----C------AC-AAAATGCCGACAACAC-----GAATTCTTAATACA
dm3 chr3R:17798134-17798438 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----T------AC-AAAATGCCGACAACAC-----GAATTCTTAATAAA
droEre2 scaffold_4820:10283178-10283490 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACATTGAAAACACGACAATT-----GCC-----------------------GAAA-A------TGAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------GCGAAATTGCATAGAA-----------------------------------------------CCTTGCCA----C------ACAAAAATGCCGACAACAC-----GAATTCTTCATAAA
droYak3 3R:18631038-18631352 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACAC---AAACACGACAATT-----GCC-----------------------GAAA-ATCAAAATATATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--T--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------GCGATATTGAATAGAA-----------------------------------------------CCTTGCCG----C------AT-AAAATGCCGACAACAC-----GAATTCTTCATAAA
droEug1 scf7180000409490:1125065-1125408 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTTCGA-----------------TTCCGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAATAAAACA-------TACGACATTCTTTCGGCC-----------------------AAAA-A---ATATTAATATCCAAA-TATATATCTACTATATATGAGATATT----G----GCAAA----CC--------AAAA------TACAAAGTGAT----------------TATAATTA------------GCTACCAAAAA------CCGAAAATAAAATGAA-----------------------------------------------CCTTGCAGTGCTTGCAGCGAT-AAAATGCCGACAAATC-----GGT-------TAAA
droBia1 scf7180000302402:6286074-6286383 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGATTCCGATTTCTATCCGATTCCGATTCCGC-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCCCATT-T---------ACA-CGCAGT----CCCT-GGC-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----AAA-------CACGACAATA-----TCC-------------------C---AGAA-A------TTAGCATCCAAA-TAGT---------------------T----G----GCAGT----GC--------GGCA--------CAAAGTGAA----------------TC-AATTG------------GCCAGCAA---------ACCAAAGTAAATAGAA-----------------------------------------------CC--------------------GAAATGCCGACAGCTC-----GAGTGACGAATA-A
droTak1 scf7180000415711:1309767-1310071 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTTCGA-----------------TTCCGATTCCGG-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACAC----AACACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------TACAAG----GCAAA----GG--------AACA--C--AAGCAAAGTGAT----------------TA-AATTA------------GCTTACAA---------ACAAAAGTAAAT---------------------------------------------------------------TGCATC-G--AAAATGCCGATAACTC-----GAGAACCAAATAAA
droEle1 scf7180000491212:2263190-2263483 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT-AGTCCAT-AGG-----CGAAAATCGAATCGTTATCGTTT---------------------G---CCAAATGATAA----ACA-------CACGCCAATT-----GCC-----------------------GAAA-A------TTAATATCCAAT-TAAA---------------------AAC--A----GCAAA-ACAGC--------AACC--A--AAACAATGTGAA----------------TA-AATTA------------GCTTAGA----------AC-AATTTAAAAAGAA-----------------------------------------------CT----------C------A--AAAATGCCGACTAAACAAATCGAAC----AAGGAA
droRho1 scf7180000780293:243686-243979 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT-GTTCCAT-AGG-----CGAAAATCGAATCGTTATCGTTT---------------------G---CTAAATGATAA----A---------CACGACAATT-----GCC-----------------------GAAA-A-------TAATATCCAAT-TTAA---------------------T----A----GCAAAAACGGC--------ACTC--A--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------TC-TAAATAGATAGAA-----------------------------------------------CTC-GCAT-----------TC-AAAACGCCGACAACTC-----GAATACTAAATAAA
droFic1 scf7180000454106:949220-949503 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----A---------CACGACAATT-----GCC-----------------------GAAA-A-------TAATATCCAAA-TAAA---------------------T----A----GCAAA----AC--------AACA--C--AAACAAAGTGAA----------------TA-AA-TA------------GCTTACT----------AA-AAGATAAATGGAA-----------------------------------------------CCTTGCATTGCCTGCATC-G--GAAATGCCGACAACTT-----CAACACATAATAAA
droKik1 scf7180000302388:1251833-1252122 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------C-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATCGCCCATT-T---------ACA-CGCAGT----C-----GGCCACACGAAA----------------TT---------------------ATAGCCAAATTTTAACTA--TA-------AACGACAATT-----GCC-----------------------GAAA-G------TCGTTATTCGATATTAT---------------------T----GATCGGTCTA--------------AAAC--C--AAATAAAGTGCATATCGGGGTTAACAAA-A-ATATA------------GATAA-------------TATAAAAGAAAAAAACTCAAAA------------------------TGACTGATGGAAATTCATA-GC----------------------------------------------ATTTA
droAna3 scaffold_13340:8804112-8804354 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------CCA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------ACAGCCCAATAATAATTA--AA-------AAGAACGATT-----GCC-----------------------AAAA-A------TTACCATC-----------------------------------------------------------AACACAA--AAACAAAGTGAA----------------AA-AA-----------------------------------------------ACTTGAAAAATTTAATTAAAAAAAAAAACATAA---------------GCCTG----------------------------------------------------
droBip1 scf7180000396708:43336-43538 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------ACAGCCCAATAATAATAA--TA-------A---ACGATT-----GCC-----------------------AAAAAA------TTAATATCCAAT-------------------------------------C-------------------CA--A--AAACAAAGTGAA----------------TA-A---------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:6659684-6659826 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------CCCGATCGCGTATATCAATCGTAAA--GCACTAAGCGCATTGCCCATT-T---------ACA-CGCAGG----CCATCAGGCCACACGAAAAT-----------CGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_0:486022-486259 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------CCCGATCGCGTATATCAATCGTAAA--GCACTAAGCGCATTGCCCATT-T---------ACA-CGCAGG----CCATCAGGCCACACGAAAAT-----------CGTTTTGCACACCCCGAAAAATATTTG---GCA-TTGATAC----AG------------CGAATA-----GCT-----------------------AACA-G------TTAT----------------------------------TAC--A----GGAAA-ACAGTTAACCATAACCC--A--ACAAAAAGTGAT----------------TA-AA--------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:11887959-11888220 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGACGTACCGAGGTTTAGGTGTAGCGTCCG-----------------------------------------ACCGATCGCGTATATCAATCGTAAAGAGCATTAAGCACATTGCCA-TTGACCATTATTAACA-CGTAGT----CA--------------------------------TT---------------------G---CCA-ATAATTA----TTAA----AACA-GA--ATT-----TC---------------------CCCAAAA-A------AAAAAATACAAA----------------------------------------A----AA--------AACA--CGAAAATAAAATACATA--AAAATTATCAAA----------------------------------------AATATAA-----------------------------------------------------------AT----C------AC-AAATTATTGAAAATTC-----A-GAATACAACAAA
droVir3 scaffold_13047:8692307-8692566 - TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTCCACATT-T---------CCATCACAATCAGTC-GC-AGG-----CAAA--------------------------------------------------------------TTCAAAACCACAGAATT-----ACTAAACAGCATAAAGAAACTG-CCCAAAA-A---G------TGTCAAAA-------------------------------------CAAA----CA--------AAAA------CACA-----AT----------------TATAATCAAAACTTAATATTGCCAAAAAAAAATAAAAATAAAAATAAATAAAG-----------------------------------------------TCC------------------------------------------------------
droMoj3 scaffold_6540:32007609-32007732 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTCCACATC-T---------CCATCACAAT----CAGT-AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:931264-931374 + TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCACATT-T---------CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATT-----------------------CAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----C------AC-AAAATGCCGACAACAC-----GAATTCTTAATAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............AACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1817.00761000000000000000
...................................CCGAGTCGTTCCGAG------GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
.............GGAACGCATTTTCGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
..............GAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
.......................................................................................................................................................................................................................TTT---------------------G---CCA-TTGATAA----ACA-------CA........................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
..............GAACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...........................................................................TT-----------------------CAGATTCCGA-CGATCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...........................................................TAGCGTCCGATTCCGATT-----------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.CCGATATGCAACGGAACGCATTTTCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000000000
....ATATGCAACGGAACGCATTTTCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...........ACGGAACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...................................CCGAGTCGTTCCGAG------GTGTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...........................GACGCGGCCCGAGTCGTTCCGAG------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..............................GCGGCCCGAGTCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
.....................................GAGTCGTTCCGAG------GTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.......TGCAACGGAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...............AACGCATTTTCGGACGCGGCCCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000000000000000
.................CGCATTTTCGGACGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
droSec2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----GGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--T--AATCAAAGTGAA----------------TA-AATTA------------GTTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----C------AC-AAAATGCCGACAACAC-----GAATTCTTAATACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................CGCAGT----CCAT-AGG-----GGAAAA.............................................................................................................................................................................................................................................................................................................................................................................................1912.0020002
....................ATTTTCGGACGCGGCCCGAGTCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
............................................................................................................................................................................CGCAGT----CCAT-AGG-----GGAAAAT-----------CGTTT---------------------G---C..................................................................................................................................................................................................................................................................................................................................................2711.0010001
.................................GCCCGAGTCGTTCCGAG------GTGTAGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..........................................................................................................................................................................A-CGCAGT----CCAT-AGG-----GGAAA..............................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
...........................................................TAGCGTCCGATTCCGATTCAGA-----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..............GAACGCATTTTCGGACGCGGCCCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
...................................CCGAGTCGTTCCGAG------GTGTAGCGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
.....................................GAGTCGTTCCGAG------GTGTAGCGTCCGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
dm3
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACA-------CACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTAACA----------GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----T------AC-AAAATGCCGACAACAC-----GAATTCTTAATAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................TAGCGTCCGATTCCGATTCAGA-----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22115.00150000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000100000000000010100200200011000000
...............AACGCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000001000020000100000000100000000000000000
...........................................................TAGCGTCCGATTCCGATTCAGT-----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000020010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................CCCGAGTCGTTCCGAG------GTGTAGCGTCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAGCGTCCGATTCCGATTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000010000000000000000000000000200000000000000000
.................................................................................................................................................................................T----CCAT-AGG-----CGAAAAT-----------CGT..............................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000400000000000000000000000000
...................................................................................................................................................................................................CGAAAAT-----------CGTTT---------------------G---CCA-TTGA...........................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CCATT-T---------ACA-CGCAGT----CCA.............................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GATATGCAACGGAACGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000010000000000000000000000000
................ACGCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
..................GCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000
...GATATGCAACGGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000010000000000
..CGATATGCAACGGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000
.................CGCATTTTCGGACGCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.................................GCCCGAGTCGTTCCGAG------GTGTAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000
........GCAACGGAACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
..CGATATGCAACGGAACGCATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
..............GAACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000
................................GGCCCGAGTCGTTCCGAG------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
...............AACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................GGCCCGAGTCGTTCCGAG------GTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................G---CCA-TTGATAA----ACA-------CACGA.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................GTAGCGTCCGATTCCGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........AACGGAACGCATTTTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGATATGCAACGGAACGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................GCCCATT-T---------ACA-CGCAGT----CCA.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATCAATCGTAAA--GCATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------CCCTGCCT----T------AC-AAAATG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATTTTCGGACGCGGCCCGAGTCGTTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGATATGCAACGGAACGCATTTTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................AGA-----------------TTCAGATTCCGA-CGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..................GCATTTTCGGACGCGGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAACGCATTTTCGGACGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AT-AGG-----CGAAAAT-----------CGTTT---------------------G---...................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CAACGGAACGCATTTTCGGACGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACGGAACGCATTTTCGGACGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TAGCGTCCGATTCCGATTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................TTCAGATTCCGA-CGATCGCGTATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACGGAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------GCTAACA----------GTGAGAATGAA.............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................ATTTTCGGACGCGGCCCGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................TAGCGTCCGATTCCGATTCAGA-----------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................ATCGTAAA--GCATTAAGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TTCAGATTCCGA-CGATCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........AACGGAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................CGGCCCGAGTCGTTCCGAG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
....ATATGCAACGGAACGCATTTTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................T-T---------ACA-CGCAGT----CCAT-AGG-----CG.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CG...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......TGCAACGGAACGCATTTTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATGCAACGGAACGCATTTTCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...GATATGCAACGGAACGCATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............AACGCATTTTCGGACGCGGCATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GATATGCAACGGAACGCATTTTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AGT----CCAT-AGG-----CGAAAAT-----------CG...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
............................ACGCGGCCCGAGTCGTTCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................CCGAGTCGTTCCGAG------GTGTAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................CGCATTTTCGGACGCGGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................................GTCGTTCCGAG------GTGTAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................GCCCGAGTCGTTCCGAG------GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCCGATATGCAACGGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGAATGAATAGAA-----------------------------------------------CCCTGCCT----.............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GACGCGGCCCGAGTCGTTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................AGTCGTTCCGAG------GTGTAGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
........................................................GTGTAGCGTCCGATTCCGATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GAACGCATTTTCGGACGCGGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................T-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-...............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GT----CCAT-AGG-----CGAAAAT-----------CG...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAA..................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTCGGACGCGGCCCGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..................................CCCGAGTCGTTCCGAG------GT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................GTTCCGAG------GTGTAGCGTCCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................TCCGATTCCGATTCAGA-----------------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATCGTAAA--GCATTAAGCGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AACGCATTTTCGGACGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACATTGAAAACACGACAATT-----GCC-----------------------GAAA-A------TGAATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--C--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------GCGAAATTGCATAGAA-----------------------------------------------CCTTGCCA----C------ACAAAAATGCCGACAACAC-----GAATTCTTCATAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................GTTCCGAG------GTGTAGCGTCCGATTCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...............................................................................................................................................................................AGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---C..................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..........................................GTTCCGAG------GTGTAGCGTCCGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...........................................................TAGCGTCCGATTCCGATTCAGA-----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................TT-T---------ACA-CGCAGT----CCAT-AGG-----...................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................................................TAGCGTCCGATTCCGATTCAGT-----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
......ATGCAACGGAACGCATTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...........................................................................................................................................................TT-T---------ACA-CGCAGT----CCAT-AGG-----C..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
....................ATTTTCGGACGCGGCCCGAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGA-----------------TTCAGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACAC---AAACACGACAATT-----GCC-----------------------GAAA-ATCAAAATATATATCCAAA-TAAA---------------------T----G----GCCAA----GC--------AACA--T--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------GCGATATTGAATAGAA-----------------------------------------------CCTTGCCG----C------AT-AAAATGCCGACAACAC-----GAATTCTTCATAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............AACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000
.................CGCATTTTCGGACGCGGCCCGAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..................................................................................................................................................................................................................................................................ACAC---AAACACGACAATT-----GCC-----------------------.................................................................................................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................................................................................ATT-----GCC-----------------------GAAA-ATCAAAATATAT................................................................................................................................................................................................................................................................2211.00101000000000
...............AACGCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001000000
............................................................................................................................................................T-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGT..............................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEug1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTTCGA-----------------TTCCGATTCCGA-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAATAAAACA-------TACGACATTCTTTCGGCC-----------------------AAAA-A---ATATTAATATCCAAA-TATATATCTACTATATATGAGATATT----G----GCAAA----CC--------AAAA------TACAAAGTGAT----------------TATAATTA------------GCTACCAAAAA------CCGAAAATAAAATGAA-----------------------------------------------CCTTGCAGTGCTTGCAGCGAT-AAAATGCCGACAAATC-----GGT-------TAAASizeHit CountTotal NormTotal
No Reads
droBia1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTCAGATTCCGATTTCTATCCGATTCCGATTCCGC-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCCCATT-T---------ACA-CGCAGT----CCCT-GGC-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----AAA-------CACGACAATA-----TCC-------------------C---AGAA-A------TTAGCATCCAAA-TAGT---------------------T----G----GCAGT----GC--------GGCA--------CAAAGTGAA----------------TC-AATTG------------GCCAGCAA---------ACCAAAGTAAATAGAA-----------------------------------------------CC--------------------GAAATGCCGACAGCTC-----GAGTGACGAATA-ASizeHit CountTotal NormTotal
No Reads
droTak1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCGATTCCGATTTCGA-----------------TTCCGATTCCGG-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----ACAC----AACACGACAATT-----GCC-----------------------GAAA-A------TTAATATCCAAA-TAAA---------------------TACAAG----GCAAA----GG--------AACA--C--AAGCAAAGTGAT----------------TA-AATTA------------GCTTACAA---------ACAAAAGTAAAT---------------------------------------------------------------TGCATC-G--AAAATGCCGATAACTC-----GAGAACCAAATAAASizeHit CountTotal NormTotal
No Reads
droEle1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT-AGTCCAT-AGG-----CGAAAATCGAATCGTTATCGTTT---------------------G---CCAAATGATAA----ACA-------CACGCCAATT-----GCC-----------------------GAAA-A------TTAATATCCAAT-TAAA---------------------AAC--A----GCAAA-ACAGC--------AACC--A--AAACAATGTGAA----------------TA-AATTA------------GCTTAGA----------AC-AATTTAAAAAGAA-----------------------------------------------CT----------C------A--AAAATGCCGACTAAACAAATCGAAC----AAGGAASizeHit CountTotal NormTotal
No Reads
droRho1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT-GTTCCAT-AGG-----CGAAAATCGAATCGTTATCGTTT---------------------G---CTAAATGATAA----A---------CACGACAATT-----GCC-----------------------GAAA-A-------TAATATCCAAT-TTAA---------------------T----A----GCAAAAACGGC--------ACTC--A--AAACAAAGTGAA----------------TA-AATTA------------GCTTACA----------TC-TAAATAGATAGAA-----------------------------------------------CTC-GCAT-----------TC-AAAACGCCGACAACTC-----GAATACTAAATAAASizeHit CountTotal NormTotal
No Reads
droFic1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------G---CCA-TTGATAA----A---------CACGACAATT-----GCC-----------------------GAAA-A-------TAATATCCAAA-TAAA---------------------T----A----GCAAA----AC--------AACA--C--AAACAAAGTGAA----------------TA-AA-TA------------GCTTACT----------AA-AAGATAAATGGAA-----------------------------------------------CCTTGCATTGCCTGCATC-G--GAAATGCCGACAACTT-----CAACACATAATAAASizeHit CountTotal NormTotal
No Reads
droKik1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------C-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATCGCCCATT-T---------ACA-CGCAGT----C-----GGCCACACGAAA----------------TT---------------------ATAGCCAAATTTTAACTA--TA-------AACGACAATT-----GCC-----------------------GAAA-G------TCGTTATTCGATATTAT---------------------T----GATCGGTCTA--------------AAAC--C--AAATAAAGTGCATATCGGGGTTAACAAA-A-ATATA------------GATAA-------------TATAAAAGAAAAAAACTCAAAA------------------------TGACTGATGGAAATTCATA-GC----------------------------------------------ATTTASizeHit CountTotal NormTotal
No Reads
droAna3
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------CCA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------ACAGCCCAATAATAATTA--AA-------AAGAACGATT-----GCC-----------------------AAAA-A------TTACCATC-----------------------------------------------------------AACACAA--AAACAAAGTGAA----------------AA-AA-----------------------------------------------ACTTGAAAAATTTAATTAAAAAAAAAAACATAA---------------GCCTG----------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............AACGCATTTTCGGACGCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100100
.........................................................TGTAGCGTCCG-----------------------------------------A-CGATCGCGTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................ATTTTCGGACGCGGCCCGAGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..........................................................GTAGCGTCCG-----------------------------------------A-CGATCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................CGGCCCGAGTCGTTCCGAG------GTGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.........................................................TGTAGCGTCCG-----------------------------------------A-CGATCGCGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droBip1
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTGCCCATT-T---------ACA-CGCAGT----CCAT-AGG-----CGAAAAT-----------CGTTT---------------------ACAGCCCAATAATAATAA--TA-------A---ACGATT-----GCC-----------------------AAAAAA------TTAATATCCAAT-------------------------------------C-------------------CA--A--AAACAAAGTGAA----------------TA-A---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------CCCGATCGCGTATATCAATCGTAAA--GCACTAAGCGCATTGCCCATT-T---------ACA-CGCAGG----CCATCAGGCCACACGAAAAT-----------CGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................CGTCCG-----------------------------------------CCCGATCGCGTATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................CCATT-T---------ACA-CGCAGG----CCATCA..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................GTAGCGTCCG-----------------------------------------CCCGATCGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..CGATATGCAACGGAACGCATTTTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
...............................CGGCCCGAGTCGTTCCGAG------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
............................................TCCGAG------GTGTAGCGTCCG-----------------------------------------CCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................ATCGTAAA--GCACTAAGCGCATTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................TTTCGGACGCGGCCCGAGTCGTTCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................CGTTCCGAG------GTGTAGCGTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------CCCGATCGCGTATATCAATCGTAAA--GCACTAAGCGCATTGCCCATT-T---------ACA-CGCAGG----CCATCAGGCCACACGAAAAT-----------CGTTTTGCACACCCCGAAAAATATTTG---GCA-TTGATAC----AG------------CGAATA-----GCT-----------------------AACA-G------TTAT----------------------------------TAC--A----GGAAA-ACAGTTAACCATAACCC--A--ACAAAAAGTGAT----------------TA-AA--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...GATATGCAACGGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.............GGAACGCATTTTCGGACGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
....................ATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
droWil2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGACGTACCGAGGTTTAGGTGTAGCGTCCG-----------------------------------------ACCGATCGCGTATATCAATCGTAAAGAGCATTAAGCACATTGCCA-TTGACCATTATTAACA-CGTAGT----CA--------------------------------TT---------------------G---CCA-ATAATTA----TTAA----AACA-GA--ATT-----TC---------------------CCCAAAA-A------AAAAAATACAAA----------------------------------------A----AA--------AACA--CGAAAATAAAATACATA--AAAATTATCAAA----------------------------------------AATATAA-----------------------------------------------------------AT----C------AC-AAATTATTGAAAATTC-----A-GAATACAACAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................GAGGTTTAGGTGTAGCGTCCG-----------------------------------------ACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200
.............................CGCGGCCCGAGACGTACCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100
.................................................GGTTTAGGTGTAGCGTCCG-----------------------------------------AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.................CGCATTTTCGGACGCGGCCCGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
...............AACGCATTTTCGGACGCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..................GCATTTTCGGACGCGGCCCGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
............CGGAACGCATTTTCGGACGCGGCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
...............AACGCATTTTCGGACGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
................ACGCATTTTCGGACGCGGCCCGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.................CGCATTTTCGGACGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..............GAACGCATTTTCGGACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...................CATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
droVir3
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTCCACATT-T---------CCATCACAATCAGTC-GC-AGG-----CAAA--------------------------------------------------------------TTCAAAACCACAGAATT-----ACTAAACAGCATAAAGAAACTG-CCCAAAA-A---G------TGTCAAAA-------------------------------------CAAA----CA--------AAAA------CACA-----AT----------------TATAATCAAAACTTAATATTGCCAAAAAAAAATAAAAATAAAAATAAATAAAG-----------------------------------------------TCC------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................CGCATTTTCGGACGCGGCCCGAGTCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000003
........................................TCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................TTAAGCGCATTCCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................AATCAGTC-GC-AGG-----CAAA--------------------------------------------------------------TT...............................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
TCCGATATGCAACGGAACGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
TCCGATATGCAACGGAACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
................................................AG------GTGTAGCGTCCG-----------------------------------------A-CGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000001000000000000000000000000
....................ATTTTCGGACGCGGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..........................................................GTAGCGTCCG-----------------------------------------A-CGATCGCGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
....................ATTTTCGGACGCGGCCCGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................CGCATTTTCGGACGCGGCCCGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTCCACATC-T---------CCATCACAAT----CAGT-AG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................AG------GTGTAGCGTCCG-----------------------------------------A-CGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
..........AACGGAACGCATTTTCGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............AACGCATTTTCGGACGCGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................GTAGCGTCCG-----------------------------------------A-CGATCGCGTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
droGri2
TCCGATATGCAACGGAACGCATTTTCGGACGCGGCCCGAGTCGTTCCGAG------GTGTAGCGTCCG-----------------------------------------A-CGATCGCGTATATCAATCGTAAA--GCATTAAGCGCATTTCACATT-T---------CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................TTTCGGACGCGGCCCGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...........................................................TAGCGTCCG-----------------------------------------A-CGATCGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110

Generated: 05/19/2015 at 03:09 PM