ID:

dsi_14264

 Coordinate:

3l:18532559-18532708 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_18532393_18532558_+]; CDS [3l_18532393_18532558_+]; intron [3l_18532559_18532885_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTCGAACGGATTGCTGTGGCGCCACCTCAACCCGTGGGTCGTGCAGGAGGTAGGTCGATCTAATTTAGTTGCATCATATAAAACCACTGAAGTGTATTCTCTAAAACACCATTATTTGCAAGTACCTACAATTTTTGAATTTGGGTATATATTGTAGGGATTACCATGACTTTATTATATATATTATTGATCAGTATCAATAGTCACGTGCACCTCTCTATAACTATAAAACTAGAAAGTATAGAGATT
**************************************************((((((........((((((................))))))((((..........))))..............)))))).....((((.....(((((((((.((((((.(((...))))))))).))))))))).....)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M025
embryo
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
.....AACGGATTGCTGTGGCGCC.................................................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..............CTGTGGCGCCACCTCAACCCGT...................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0
...CGAACGGATTGCTGTGGCGCCACCTCA............................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
CTTCGAACGGATTGCTGT........................................................................................................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
CTTCGAACGGATTGCTGTGGCGCCACCT.............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...CGAACGGATTGCTGTGGCGCC.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................CCTCAACCCGTGGGTCGTGCAGGAGCCT..................................................................................................................................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0 0 0 0
....GAACGGATTGCTGTGGCGCCA................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............GCTGTGGCGCCACCTCAACCCGTGGGTC................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....AACGGATTGCTGGGGCGCCACCTCA............................................................................................................................................................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0 0 0 0
CTTCGAACGGATTGCTGTGGCGCCACCTC............................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........GATTGCTGTGGCGCCACCTCAACCC........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................CAACCCGTGGGTCGTGCAGGAGCCTG.................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0
CTTCGAACGGATTGCTGTGGCGC................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....AACGGATTGCTGTGGCGCCACCTC............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........GATTGCTGTGGCGCCACCTCAACCCGTGG.................................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........GATTGCTGTGGCGCCACCTCAA........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...CGAACGGATTGCTGTGGCGCCACCTC............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......ACGGATTGCTGTGGCGCCACCTC............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..TCGAACGGATTGCTGTGGCGCCACCTCA............................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......CGGATTGCTGTGGCGCCACCT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................ACCCGTGGGTCGTGCAGGAGCCTG.................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................AACCCGTGGGTCGTGCAGGAGC....................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....AACGGATTGCTGTGGCGCCACCT.............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................CTCAACCCGTGGGTCGTGCAGG.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...CGAACGGATTGCTGTGGCGCCACCG.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...CGAACGGATTGCTGTGGCGC................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................CGCCACCTCAACCCGTGGGTCGTGCAGGA......................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.........GATTGCTGTGGCGCCACCTCAACCCGT...................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................TGGGTCGTGCATTAGGGAGGTC................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 1 0 0 0 0 0
........GGATTGCTGTGGCGCCACCTCAACCCGT...................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................ATATATATTATTGATCAGCATCAA................................................. 24 1 6 0.67 4 0 0 0 0 2 0 2 0 0
...............................................................................................TACTCTCTAAAACACC........................................................................................................................................... 16 1 2 0.50 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................CATCAGTATCAATCGTCA........................................... 18 2 5 0.40 2 0 0 0 0 2 0 0 0 0
.................................................................................................................................................................................ATATATATTATTGATCAGCATCAAT................................................ 25 1 5 0.20 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................CGATTGTCGAATTTGGGTATA.................................................................................................... 21 3 7 0.14 1 1 0 0 0 0 0 0 0 0
..............CTGTGGCGCCGCTTCAAC.......................................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................ATATATATTATTGATCAGCATAAAT................................................ 25 2 10 0.10 1 0 0 0 0 1 0 0 0 0
...GCAACGGATTGCTTTGGCGC................................................................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0
...................................................................CGTTGAATCATATAAAA...................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.............................................AGAAGGTAGGCCGATTTA........................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GAAGCTTGCCTAACGACACCGCGGTGGAGTTGGGCACCCAGCACGTCCTCCATCCAGCTAGATTAAATCAACGTAGTATATTTTGGTGACTTCACATAAGAGATTTTGTGGTAATAAACGTTCATGGATGTTAAAAACTTAAACCCATATATAACATCCCTAATGGTACTGAAATAATATATATAATAACTAGTCATAGTTATCAGTGCACGTGGAGAGATATTGATATTTTGATCTTTCATATCTCTAA
**************************************************((((((........((((((................))))))((((..........))))..............)))))).....((((.....(((((((((.((((((.(((...))))))))).))))))))).....)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M024
male body		 M025
embryo
...........................................................................................................GTTGTCATAAACGTTCAAGGAT......................................................................................................................... 22 3 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................................ATTAGTGCAGGTGGAGAGCT............................. 20 3 3 0.33 1 0 1 0 0 0
..................................CACCCAGCACGTCCTA........................................................................................................................................................................................................ 16 1 4 0.25 1 0 0 1 0 0
.............................................................................................................................................................................................................................TTTGATATTTTCATGTTTCATAT...... 23 3 9 0.11 1 1 0 0 0 0
.........................................................................................................................TCAGGGCAGTTAAAAACTTA............................................................................................................. 20 3 10 0.10 1 0 0 0 1 0
..............................................................................................................................................................CCTAATGTTACAGAAATA.......................................................................... 18 2 16 0.06 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:18532509-18532758 + dsi_14264 CTTCGAACGGATTGCTGTGGCGCCACCT------CAACCCGTGGGTCGTGCAGGAGGTAGGTC--G--------ATCTAA-----------------------------TTTAGTTGCATCATATAAAACCACTGAAGTGTATTCTCTAAAACAC---CATTATTTGCAAGTACCTACAATTTTTGAATTTG-GGTATATATTGTAGG----------GATTACCATGACTTTAT-TATATATATTATTGATCAGTATCAATAGT------------CACGTGCACCTCT------------C--------------------TATA-ACTATAAAA-CTAGAAAGTATA--GAGATT
droSec2 scaffold_19:876428-876655 + CTTCGAACGGATTGCTGTGGCGCCACCG------CAGCCCGTGGGTCGCGCAGGAGGTAGGTC--G--------ATCTAA-----------------------------TTTAGTTGCATCATATAATAATACTGAAGTGCATTCTTTAAAATAACTTCATTATTTTCAAGTGCCTACAGTTTTTAAATATG-TGTATATATT-T---------------------------------TATATAATTTTGATCAGTATCAA----------------CACGTGTACCTCT------------CTTT------------------ATT-ACTATAAAA-CTAGAAAATCTA--GAGATT
dm3 chr3L:18910797-18911061 + CTTCGAACGGATTGCTGTGGCGCCACCT------CAGCCCGTGGGTCGTGCAGGAGGTAGGTC--G--------ATTTAA-----------------------------TTTAATTGCATCATATAATACTACTGAAATGC------------------ATTATTTTCAAGTTCGTACAATTTTTGAATTTG-TGTATATAT-GTATATTTAACCCCTAGTTAAAATGATTTTATATATATATAGTCTTGATCAGGATAGATAGT------------TACGTGTACTTA-------------CTTTATTAACTTAGAGATCTCGGGA-ACTATAAAAGATAGAAAATATA--AATATT
droEre2 scaffold_4784:18728457-18728585 + CTTCCAACGGATTGCTGTGGCACCTCCT------CAACCCGTGGGTCGTGCAGGAGGTAGATG-----------ATCTAA-----------------------------TTAAGTTGTTGT-------ACTACTA-AATGCATTTTATAGAACTCCGTAATTATTTTCAAGTTAATACAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr3L_random_138:5487-5679 + CTTCGAACGGATTGCTGTGGCACCTCCT------CAGCCCGTGGGTCGTGCAGGAGGTAGGTG-----------ATCTAA-----------------------------CTTAGTTGCCGTATATACTACTACG-----------------------TAATTATTTTCAAGTTCCTACAACTATTGAATTTATTGTATATAC----------------------------------------TAAACGCAATCAGAATTGA-------------------------------------------------ACGTCGAGACCTC-AAA-ACTTTAAAAGCTAGAAAACTTA--GA---T
droEug1 scf7180000409471:577535-577746 - CTTCGAAAGGATTGCTGTTGCGCCTCCC------CAACCTGTGGGTCGCGCTGGAGGTAAGTATCAGTAAAGAGATTATA-----------------------------TTAAGTTGTGTTGCATTTAATTTTTATTGCATTTTAATTGAATTTT---CATCTTGTGAAAATAAAT------------------GTAAATGTAGTAAA----------AATACACTTATTTATAT-TATATTTCTTGATG-----------TAGTCTAATGGAGCTAA--------------------------------ACAAAGACAC------------------------------------AT
droBia1 scf7180000302529:586930-587135 - CTTCGAACGGGTGGCTGTGGCGCCTCCC------CAGCCCGTGGGTCGTGCAGGAGGTAGGTT--G--------T-CTAAAGACGATAAGTGTTATTCAGTCAAGAAGGTTTAATTGTAAT-------ATTTACA-AATGTTTGTTTTAGAA--------------------------------------------------A-T---------------------------------TAAATAAT----------ACCAATAAG------CAACTAAACG------ACTTTTCAAAAATCAC--------------------TAAAATCTAAATTA-CAAGAAAATTTATAATAAAT
droTak1 scf7180000415184:129434-129492 - CTTCGAACGGGTCGCTGTGGCGCC---------------------TCGTGCAGGAGGTAAGTT--G--------ATT-AA-----------------------------ATGATTTGCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491249:6181777-6181829 + CTTCGAGCGGATCGTTATGG---CTCCC------CAGCCCGTGGGTCGTGCAGGAGGTAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000773959:17304-17363 - CTCCGACCGGGTCGTC---GTGCGTCCC------CAGCCCGTGGGTCGTTCCGGAGGTAGGTG--G--------TTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453824:269668-269711 + C------------GTTATGGCGCCACCG------CAGCCAGTGGCTCGTGCAGGAGGTAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302248:60961-61015 - CTTCGAGCAACCCATCTTAGTCGCTCCC------CGACCCGTTGGTCGTGCAGGAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:18528556-18528622 - GTTTGATGGGATTGTTGTGGATCCCCCC------CATCCGGTGGCTCGTGCAGGAGGTAATTG--G--------TTTTGG-----------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396741:1715724-1715789 - GTTTGACGGGGTTATTGCGGGTCCCCCC------CATCCGGTGGGTCGTGCAGGAGGTAATTG-----------ATTTGA-----------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group8:6984080-6984135 + CTACGAGCGCGCCGTTTATGTGGCACCC------CAGCCGGAAGGACGTGCAGCCGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_36:322859-322914 - CTACGAGCGCGCCGTTTATGTGGCACCC------CAGCCGGAAGGACGTGCAGCCGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004762:3425266-3425330 - CTATCAGCGTGCCATCTATGTGAATCCCCAAGTACAGCCCGAAAGTCGTGCAGCTGGTAAGAC--A--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:13532032-13532095 - CTACGAGCGTACCATCTATGTCGAGCCT------TTGCCAGAAAGCCGTTCTGCCGGTGAGTATCG--------ATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:13812228-13812236 + CTACGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTCGAACGGATTGCTGTGGCGCCACCT------CAACCCGTGGGTCGTGCAGGAGGTAGGTC--G--------ATCTAA-----------------------------TTTAGTTGCATCATATAAAACCACTGAAGTGTATTCTCTAAAACAC---CATTATTTGCAAGTACCTACAATTTTTGAATTTG-GGTATATATTGTAGG----------GATTACCATGACTTTAT-TATATATATTATTGATCAGTATCAATAGT------------CACGTGCACCTCT------------C--------------------TATA-ACTATAAAA-CTAGAAAGTATA--GAGATTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....AACGGATTGCTGTGGCGCC..............................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
..............CTGTGGCGCCACCT------CAACCCGT............................................................................................................................................................................................................................................................................................................................2212.00200020000000000000
...CGAACGGATTGCTGTGGCGCCACCT------CA..................................................................................................................................................................................................................................................................................................................................2712.00202000000000000000
CTTCGAACGGATTGCTGT....................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
CTTCGAACGGATTGCTGTGGCGCCACCT------....................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
...CGAACGGATTGCTGTGGCGCC..............................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.........................CCT------CAACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2811.00101000000000000000
....GAACGGATTGCTGTGGCGCCA.............................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............GCTGTGGCGCCACCT------CAACCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
CTTCGAACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.........GATTGCTGTGGCGCCACCT------CAACCC..............................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
CTTCGAACGGATTGCTGTGGCGC...............................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.....AACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.........GATTGCTGTGGCGCCACCT------CAACCCGTGG..........................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.........GATTGCTGTGGCGCCACCT------CAA.................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...CGAACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
......ACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..TCGAACGGATTGCTGTGGCGCCACCT------CA..................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.......CGGATTGCTGTGGCGCCACCT------....................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...................................AACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....AACGGATTGCTGTGGCGCCACCT------....................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..........................CT------CAACCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...CGAACGGATTGCTGTGGCGCCACCG------....................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...CGAACGGATTGCTGTGGCGC...............................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
....................CGCCACCT------CAACCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.........GATTGCTGTGGCGCCACCT------CAACCCGT............................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
........GGATTGCTGTGGCGCCACCT------CAACCCGT............................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
droSec2
CTTCGAACGGATTGCTGTGGCGCCACCG------CAGCCCGTGGGTCGCGCAGGAGGTAGGTC--G--------ATCTAA-----------------------------TTTAGTTGCATCATATAATAATACTGAAGTGCATTCTTTAAAATAACTTCATTATTTTCAAGTGCCTACAGTTTTTAAATATG-TGTATATATT-T---------------------------------TATATAATTTTGATCAGTATCAA----------------CACGTGTACCTCT------------CTTT------------------ATT-ACTATAAAA-CTAGAAAATCTA--GAGATTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................AGCCCGTGGGTCGCGCAGG................................................................................................................................................................................................................................................................................................................1914.0040040
CTTCGAACGGATTGCTGTG...................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........GATTGCTGTGGCGCCACCG------CA..................................................................................................................................................................................................................................................................................................................................2111.0010010
CTTCGAACGGATTGCTGTGGCGCCAC............................................................................................................................................................................................................................................................................................................................................2611.0010010
CTTCGAACGGATTGCTGTGG..................................................................................................................................................................................................................................................................................................................................................2011.0010010
...................................AGCCCGTGGGTCGCGCAGGA...............................................................................................................................................................................................................................................................................................................2011.0010010
dm3
CTTCGAACGGATTGCTGTGGCGCCACCT------CAGCCCGTGGGTCGTGCAGGAGGTAGGTC--G--------ATTTAA-----------------------------TTTAATTGCATCATATAATACTACTGAAATGC------------------ATTATTTTCAAGTTCGTACAATTTTTGAATTTG-TGTATATAT-GTATATTTAACCCCTAGTTAAAATGATTTTATATATATATAGTCTTGATCAGGATAGATAGT------------TACGTGTACTTA-------------CTTTATTAACTTAGAGATCTCGGGA-ACTATAAAAGATAGAAAATATA--AATATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................AGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAACGGATTGCTGTGGCG................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CT------CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GCAGGAGGTAGGTC--G--------ATA.........................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGCCACCT------CAGCCCGTGGGT........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCACCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCGAACGGATTGCTGTGGCGC...............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGTGGCGCCACCT------CAGCCCGT............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCACCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTTCGAACGGATTGCTGTG...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................A-ACTATAAAAGATAGAAAATATA--A.....2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATTGCTGTGGCGCCACCT------CAGCCC..............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTTCGAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAACGGATTGCTGTGGCGCCAC............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATTGCTGTGGCGCCACCT------CA..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTGGCGCCACCT------CAGCCCGT............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGTGGCGCCACCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...CGAACGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCACCT------CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATTGCTGTGGCGCCACCT------....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CAGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCT------CAGCCCGTGGGTCGTGCAG.................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................CCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTTCGAACGGATTGCTGTGGCGCC..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGAACGGATTGCTGTGGCGCCA.............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGCCCGTGGGTCGTGCAG.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACGGATTGCTGTGGCGCCACCT------CT..................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCGAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTGGCGCCACCT------CAGCCCGTGGGTCGT.....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......CGGATTGCTGTGGCGCCACCT------....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTTCGAACGGATTGCTGTGGCGC...............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2011.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACGGATTGCTGTGGCGCCAC............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGGATTGCTGTGGCGCCACCT------C...................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CTTCCAACGGATTGCTGTGGCACCTCCT------CAACCCGTGGGTCGTGCAGGAGGTAGATG-----------ATCTAA-----------------------------TTAAGTTGTTGT-------ACTACTA-AATGCATTTTATAGAACTCCGTAATTATTTTCAAGTTAATACAACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
CTTCCAACGGATTGCTGTG...................................................................................................................................................................................................................................................................................................................................................19127.002720004210
...................................AACCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................20114.00142131340
CTTCCAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2618.0084100210
....CAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2217.0072200120
...CCAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2315.0051010120
.TTCCAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2515.0052000030
CTTCCAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................2115.0050000050
..........................CT------CAACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2513.0030010020
...CCAACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2513.0032100000
............TGCTGTGGCACCTCCT------CAACCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2913.0033000000
...................................AACCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1913.0030100020
..........................CT------CAACCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2013.0032000100
.........GATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2013.0033000000
CTTCCAACGGATTGCTGTGG..................................................................................................................................................................................................................................................................................................................................................2013.0031000020
CTTCCAACGGATTGCTGT....................................................................................................................................................................................................................................................................................................................................................1813.0030000030
...CCAACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2712.0020000020
CTTCCAACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................2512.0020000020
..........................CT------CAACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2712.0020000020
....CAACGGATTGCTGTGGCAC...............................................................................................................................................................................................................................................................................................................................................1912.0020000020
...................................AACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2212.0020000020
...CCAACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................2212.0021000010
...CCAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................1812.0021000010
....CAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2512.0021100000
...................................AACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2412.0020001010
..................................CAACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2312.0020000020
....CAACGGATTGCTGTGGCA................................................................................................................................................................................................................................................................................................................................................1812.0020001010
....CAACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2412.0021100000
....................................ACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2312.0020010010
....................................ACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2112.0020000110
..................................CAACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2512.0021000010
....CAACGGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................2311.0010100000
CTTCCAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2911.0011000000
.......................CTCCT------CAACCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2211.0010000010
...................GCACCTCCT------CAACCCGTGGGTCGT.....................................................................................................................................................................................................................................................................................................................2411.0010100000
.TTCCAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2811.0010000010
.......................................CGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................1811.0010000010
........GGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2011.0011000000
..........................CT------CAACCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2311.0010000100
...........TTGCTGTGGCACCTCCT------CAACCCGTGG..........................................................................................................................................................................................................................................................................................................................2711.0010001000
.....................ACCTCCT------CAACCCGTGGGT........................................................................................................................................................................................................................................................................................................................1911.0010001000
.......................CTCCT------CAACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2811.0010000010
CTTCCAACGGATTGCTGTGGCA................................................................................................................................................................................................................................................................................................................................................2211.0010000010
CTTCCAACGGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................2711.0010000100
...........................T------CAACCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2411.0010000010
...CCAACGGATTGCTGTGGCA................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..........................CT------CAACCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2211.0010000100
...................GCACCTCCT------CAACCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2211.0011000000
.....AACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2311.0011000000
..........................................................................................................................................................CCGTAATTATTTTCAAGTTAATACAAC.................................................................................................................................................................................2711.0011000000
..........................CT------CAACCCGTGGGTCGTGCAGT................................................................................................................................................................................................................................................................................................................2211.0010000010
....................CACCTCCT------CAACCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2111.0010100000
...........................T------CAACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2611.0010000010
.....................................CCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................1811.0010000010
............TGCTGTGGCACCTCCT------CAACC...............................................................................................................................................................................................................................................................................................................................2111.0010001000
CTTCCAACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2811.0010010000
........GGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2111.0011000000
.....................ACCTCCT------CAACCCGTGGGTCGT.....................................................................................................................................................................................................................................................................................................................2211.0011000000
.........................CCT------CAACCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2811.0010000010
...CCAACGGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....AACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2411.0010000010
...CCAACGGATTGCTGTGGCACCC.............................................................................................................................................................................................................................................................................................................................................2211.0010100000
..........................CT------CAACCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................1911.0010000010
.........................CCT------CAACCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2011.0010010000
..........ATTGCTGTGGCACCTCCT------CAACCCGTG...........................................................................................................................................................................................................................................................................................................................2711.0010000010
....................................ACCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1811.0010000010
....CAACGGATTGCTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................2011.0010000010
.....AACGGATTGCTGTGGCACA..............................................................................................................................................................................................................................................................................................................................................1911.0010000010
.....................ACCTCCT------CAACCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2011.0011000000
....CAACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2611.0010000010
CTTCCAACGGATTGCTGTGGCC................................................................................................................................................................................................................................................................................................................................................2211.0010000010
................GTGGCACCTCCT------CAACCCGT............................................................................................................................................................................................................................................................................................................................2011.0010001000
...........................T------CAACCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2211.0010000100
.......................................CGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2020.5010000010
droYak3
CTTCGAACGGATTGCTGTGGCACCTCCT------CAGCCCGTGGGTCGTGCAGGAGGTAGGTG-----------ATCTAA-----------------------------CTTAGTTGCCGTATATACTACTACG-----------------------TAATTATTTTCAAGTTCCTACAACTATTGAATTTATTGTATATAC----------------------------------------TAAACGCAATCAGAATTGA-------------------------------------------------ACGTCGAGACCTC-AAA-ACTTTAAAAGCTAGAAAACTTA--GA---TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
CTTCGAACGGATTGCTGTG...................................................................................................................................................................................................................................................................................................................................................19220.0040050010340000
.....AACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2126.5013121000000000
CTTCGAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2625.001053100010000
..........................CT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................1923.00603000030000
......ACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2022.50550000000000
....................CACCTCCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2122.50505000000000
CTTCGAACGGATTGCTGTGG..................................................................................................................................................................................................................................................................................................................................................2022.00400000130000
...................................AGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1922.00401001110000
..........................CT------CAGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2522.00400000040000
CTTCGAACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................2522.00420001010000
CTTCGAACGGATTGCTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................2421.50320000010000
..........................CT------CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2021.50301000110000
.....AACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2521.50303000000000
...................................AGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2221.50301000020000
...................................AGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2021.50301000020000
CTTCGAACGGATTGCTGTGGCA................................................................................................................................................................................................................................................................................................................................................2221.00202000000000
.......CGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................1921.00201100000000
..................................CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................1821.00201000100000
.....AACGGATTGCTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................1921.00220000000000
..................GGCACCTCCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2321.00202000000000
CTTCGAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2921.00220000000000
CTTCGAACGGATTGCTGT....................................................................................................................................................................................................................................................................................................................................................1821.00201000100000
....GAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2221.00211000000000
...CGAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2621.00211000000000
.......................CTCCT------CAGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2521.00202000000000
..........................CT------CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2321.00202000000000
....................................GCCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2321.00201000010000
CTTCGAACGGATTGCTGTGGC.................................................................................................................................................................................................................................................................................................................................................2121.00200000020000
..........................CT------CAGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2221.00202000000000
.....AACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................2021.00211000000000
.....AACGGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................2221.00211000000000
..............CTGTGGCACCTCCT------CAGCCCGTGGGT........................................................................................................................................................................................................................................................................................................................2621.00202000000000
..........................CT------CAGCCCGTGGGTCGTG....................................................................................................................................................................................................................................................................................................................1820.50101000000000
....................CACCTCCT------CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2620.50101000000000
........GGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................1920.50101000000000
...CGAACGGATTGCTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................2120.50100000010000
..................................CAGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2320.50100000010000
...........TTGCTGTGGCACCTCCT------CAGC................................................................................................................................................................................................................................................................................................................................2120.50101000000000
...........................T------CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2220.50101000000000
CTTCGAACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2820.50100100000000
.....................ACCTCCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................2020.50100001000000
...................................AGCCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2420.50100000010000
....................................GCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................1820.50101000000000
......................CCTCCT------CAGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2620.50101000000000
..........ATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................1920.50101000000000
......................CCTCCT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2320.50101000000000
................GTGGCACCTCCT------CAGCCCGTGGGT........................................................................................................................................................................................................................................................................................................................2420.50101000000000
.........................CCT------CAGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2320.50101000000000
...........................T------CAGCCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2620.50100000010000
.........................CCT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2020.50100000010000
....GAACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2620.50101000000000
.......................CTCCT------CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2620.50101000000000
........................TCCT------CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2520.50100000100000
......................CCTCCT------CAGCCCGTGGGTC.......................................................................................................................................................................................................................................................................................................................1920.50101000000000
....................CACCTCCT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2520.50100100000000
.....................ACCTCCT------CAGCCCGTGGGTCGTGC...................................................................................................................................................................................................................................................................................................................2420.50101000000000
...CGAACGGATTGCTGTGGCAC...............................................................................................................................................................................................................................................................................................................................................2020.50100000010000
......................................CCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2120.50100000010000
......ACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................1920.50100001000000
..........................CT------CAGCCCGTGGGTCGTGCAGGAGCCT...........................................................................................................................................................................................................................................................................................................2720.50100000010000
.........................CCT------CAGCCCGTGGGTCGTGCAG.................................................................................................................................................................................................................................................................................................................2220.50100000010000
.........GATTGCTGTGGCACCTCCT------CAGCCCGT............................................................................................................................................................................................................................................................................................................................2720.50100000010000
......ACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2420.50101000000000
...CGAACGGATTGCTGTGGCACCT.............................................................................................................................................................................................................................................................................................................................................2220.50100000010000
.....AACGGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2320.50100000010000
.......................CTCCT------CAGCCCGTGGGTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2820.50100000100000
.....AACGGATTGCTGTGGCAC...............................................................................................................................................................................................................................................................................................................................................1820.50110000000000
....GAACGGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.........................CCT------CAGCCCGTGGGTCGTGCA..................................................................................................................................................................................................................................................................................................................2120.50101000000000
....GAACGGATTGCTGTGGCACC..............................................................................................................................................................................................................................................................................................................................................2020.50100000010000
.........GATTGCTGTGGCACCTCCT------CAGCCC..............................................................................................................................................................................................................................................................................................................................2520.50101000000000
....................CACCTCCT------CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2920.50100000010000
.....................ACCTCCT------CAGCCCGTGGGTCGT.....................................................................................................................................................................................................................................................................................................................2220.50100000010000
..................................CAGCCCGTGGGTCGTGCAGG................................................................................................................................................................................................................................................................................................................2020.50100000100000
........GGATTGCTGTGGCACCTCCT------C...................................................................................................................................................................................................................................................................................................................................2120.50101000000000
..................................CAGCCCGTGGGTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2120.50100000010000
....GAACGGATTGCTGTGGCACCTCC...........................................................................................................................................................................................................................................................................................................................................2320.50101000000000
.TTCGAACGGATTGCTGTGG..................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
.........GATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................2120.50101000000000
..........ATTGCTGTGGCACCTCCT------CAGC................................................................................................................................................................................................................................................................................................................................2220.50101000000000
...........TTGCTGTGGCACCTCCT------CAGCCCGTGG..........................................................................................................................................................................................................................................................................................................................2720.50101000000000
...................................AGCCCGTGGGTCGTGCAGGAGCC............................................................................................................................................................................................................................................................................................................2320.50100000010000
...................GCACCTCCT------CAGCCCGTGGGTCGT.....................................................................................................................................................................................................................................................................................................................2420.50101000000000
CTTCGAACGGATTGCTGTGGCAC...............................................................................................................................................................................................................................................................................................................................................2320.50100000010000
CTTCGAACGGATTGCTGTGGCACCTCCT------CA..................................................................................................................................................................................................................................................................................................................................3020.50100000010000
........GGATTGCTGTGGCACCTCCT------....................................................................................................................................................................................................................................................................................................................................2020.50101000000000
CTTCGAACGGATTGCTGTGC..................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
...CGAACGGATTGCTGTGGCACCTC............................................................................................................................................................................................................................................................................................................................................2320.50101000000000
....GAACGGATTGCTGTGGCAC...............................................................................................................................................................................................................................................................................................................................................1920.50110000000000
droEug1
CTTCGAAAGGATTGCTGTTGCGCCTCCC------CAACCTGTGGGTCGCGCTGGAGGTAAGTATCAGTAAAGAGATTATA-----------------------------TTAAGTTGTGTTGCATTTAATTTTTATTGCATTTTAATTGAATTTT---CATCTTGTGAAAATAAAT------------------GTAAATGTAGTAAA----------AATACACTTATTTATAT-TATATTTCTTGATG-----------TAGTCTAATGGAGCTAA--------------------------------ACAAAGACAC------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droBia1
CTTCGAACGGGTGGCTGTGGCGCCTCCC------CAGCCCGTGGGTCGTGCAGGAGGTAGGTT--G--------T-CTAAAGACGATAAGTGTTATTCAGTCAAGAAGGTTTAATTGTAAT-------ATTTACA-AATGTTTGTTTTAGAA--------------------------------------------------A-T---------------------------------TAAATAAT----------ACCAATAAG------CAACTAAACG------ACTTTTCAAAAATCAC--------------------TAAAATCTAAATTA-CAAGAAAATTTATAATAAATSizeHit CountTotal NormTotal
No Reads
droTak1
CTTCGAACGGGTCGCTGTGGCGCC---------------------TCGTGCAGGAGGTAAGTT--G--------ATT-AA-----------------------------ATGATTTGCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTTCGAGCGGATCGTTATGG---CTCCC------CAGCCCGTGGGTCGTGCAGGAGGTAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTCCGACCGGGTCGTC---GTGCGTCCC------CAGCCCGTGGGTCGTTCCGGAGGTAGGTG--G--------TTATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
C------------GTTATGGCGCCACCG------CAGCCAGTGGCTCGTGCAGGAGGTAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTCGAGCAACCCATCTTAGTCGCTCCC------CGACCCGTTGGTCGTGCAGGAGGTGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
GTTTGATGGGATTGTTGTGGATCCCCCC------CATCCGGTGGCTCGTGCAGGAGGTAATTG--G--------TTTTGG-----------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................ATCCGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................22112.0012730020
...................................ATCCGGTGGCTCGTGCAGG................................................................................................................................................................................................................................................................................................................1917.007610000
...................................ATCCGGTGGCTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2016.006600000
GTTTGATGGGATTGTTGTGGATCCCCCC------....................................................................................................................................................................................................................................................................................................................................2813.003200010
.....................................CCGGTGGCTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................1813.003300000
GTTTGATGGGATTGTTGTGGAT................................................................................................................................................................................................................................................................................................................................................2213.003001011
..........ATTGTTGTGGATCCCCCC------CAT.................................................................................................................................................................................................................................................................................................................................2112.002110000
.............GTTGTGGATCCCCCC------CATCCGGTG...........................................................................................................................................................................................................................................................................................................................2412.002200000
..................................CATCCGGTGGCTCGTGCAGG................................................................................................................................................................................................................................................................................................................2012.002010010
.....................TCCCCCC------CATCCGGTGGCTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2812.002200000
.........GATTGTTGTGGATCCCCCC------C...................................................................................................................................................................................................................................................................................................................................2012.002200000
...........TTGTTGTGGATCCCCCC------CATC................................................................................................................................................................................................................................................................................................................................2112.002200000
.........GATTGTTGTGGATCCCCCC------CATCCGGT............................................................................................................................................................................................................................................................................................................................2712.002200000
......................................CGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................1912.002200000
..................................CATCCGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2312.002110000
....................................TCCGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2112.002200000
............TGTTGTGGATCCCCCC------CATCCGGTGGCT........................................................................................................................................................................................................................................................................................................................2812.002010010
....................ATCCCCCC------CATCCGGTGGCTCGTGCAGG................................................................................................................................................................................................................................................................................................................2812.002200000
................GTGGATCCCCCC------CATCCGGT............................................................................................................................................................................................................................................................................................................................2012.002200000
..................................CATCCGGTGGCTCGTGCAGGAG..............................................................................................................................................................................................................................................................................................................2212.002110000
.............GTTGTGGATCCCCCC------CATCCGGTGGC.........................................................................................................................................................................................................................................................................................................................2611.001100000
........GGATTGTTGTGGATCCCCCC------....................................................................................................................................................................................................................................................................................................................................2011.001100000
GTTTGATGGGATTGTTGTGGATCCCCCC------C...................................................................................................................................................................................................................................................................................................................................2911.001010000
............TGTTGTGGATCCCCCC------CATCCGGTGGCTC.......................................................................................................................................................................................................................................................................................................................2911.001010000
..TTGATGGGATTGTTGTGGATC...............................................................................................................................................................................................................................................................................................................................................2111.001010000
.........GATTGTTGTGGATCCCCCC------CATCCGGTG...........................................................................................................................................................................................................................................................................................................................2811.001000010
...........TTGTTGTGGATCCCCCC------CATCCGGC............................................................................................................................................................................................................................................................................................................................2511.001010000
GTTTGATGGGATTGTTGTGGA.................................................................................................................................................................................................................................................................................................................................................2111.001000010
..TTGATGGGATTGTTGTGG..................................................................................................................................................................................................................................................................................................................................................1811.001000010
.........GATTGTTGTGGATCCCCCC------CATCC...............................................................................................................................................................................................................................................................................................................................2411.001100000
..................................CATCCGGTGGCTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2111.001100000
.........GATTGTTGTGGATCCCCCC------CAT.................................................................................................................................................................................................................................................................................................................................2211.001100000
........................CCCC------CATCCGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2711.001010000
....GATGGGATTGTTGTGGAT................................................................................................................................................................................................................................................................................................................................................1811.001000010
.....................................CCGGTGGCTCGTGCAGGAG..............................................................................................................................................................................................................................................................................................................1911.001100000
...TGATGGGATTGTTGTGGATCCCCCC------CAT.................................................................................................................................................................................................................................................................................................................................2811.001100000
..........ATTGTTGTGGATCCCCCC------CATCCGGT............................................................................................................................................................................................................................................................................................................................2611.001100000
........GGATTGTTGTGGATCCCCCC------CATC................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................CCCCC------CATCCGGTGGCTCGTGCAGGA...............................................................................................................................................................................................................................................................................................................2611.001010000
...........................C------CATCCGGTGGCTCGTGCA..................................................................................................................................................................................................................................................................................................................1911.001100000
.............GTTGTGGATCCCCCC------CATCCGGT............................................................................................................................................................................................................................................................................................................................2311.001100000
.......................CCCCC------CATCCGGTGGCTCGTGCAGGAGC.............................................................................................................................................................................................................................................................................................................2811.001100000
...................GATCCCCCC------CATCCGGTGGCTCGTGCA..................................................................................................................................................................................................................................................................................................................2711.001100000
.......GGGATTGTTGTGGATCCCCCC------CATCCGGT............................................................................................................................................................................................................................................................................................................................2911.001100000
..................GGATCCCCCC------CATCCGGTGGC.........................................................................................................................................................................................................................................................................................................................2111.001100000
.........GATTGTTGTGGATCCCCCC------....................................................................................................................................................................................................................................................................................................................................1911.001100000
..........ATTGTTGTGGATCCCCCC------CATC................................................................................................................................................................................................................................................................................................................................2211.001100000
....................ATCCCCCC------CATCCGGTGGCTCGT.....................................................................................................................................................................................................................................................................................................................2311.001100000
....GATGGGATTGTTGTGGATCCCCCC------CATC................................................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
GTTTGACGGGGTTATTGCGGGTCCCCCC------CATCCGGTGGGTCGTGCAGGAGGTAATTG-----------ATTTGA-----------------------------TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CTACGAGCGCGCCGTTTATGTGGCACCC------CAGCCGGAAGGACGTGCAGCCGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GTTTATGTGGCACCC------CAGCCGGAAG..........................................................................................................................................................................................................................................................................................................................25112.001201200000000
.....................GGCACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2418.0080800000000
.............GTTTATGTGGCACCC------CAGCCGGAA...........................................................................................................................................................................................................................................................................................................................2416.0060600000000
............CGTTTATGTGGCACCC------CAGCCGGAA...........................................................................................................................................................................................................................................................................................................................2516.0060600000000
............CGTTTATGTGGCACCC------CAGCCGGAAG..........................................................................................................................................................................................................................................................................................................................2615.0050500000000
..........GCCGTTTATGTGGCACCC------CAGCCGGAA...........................................................................................................................................................................................................................................................................................................................2714.0040400000000
CTACGAGCGCGCCGTTTATGTGG...............................................................................................................................................................................................................................................................................................................................................2313.0030300000000
CTACGAGCGCGCCGTTTATGT.................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
..............TTTATGTGGCACCC------CAGCCGGAAG..........................................................................................................................................................................................................................................................................................................................2413.0030300000000
.............GTTTATGTGGCACCC------CAGCCGGA............................................................................................................................................................................................................................................................................................................................2313.0030300000000
CTACGAGCGCGCCGTTTATGTG................................................................................................................................................................................................................................................................................................................................................2213.0030300000000
.............GTTTATGTGGCACCC------CAGCCGGAAGG.........................................................................................................................................................................................................................................................................................................................2612.0020200000000
.............GTTTATGTGGCACCC------CAGC................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...................GTGGCACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2612.0020200000000
.....AGCGCGCCGTTTATGTGGC..............................................................................................................................................................................................................................................................................................................................................1912.0020200000000
...............TTATGTGGCACCC------CAGCCGGAAGG.........................................................................................................................................................................................................................................................................................................................2412.0020200000000
.......................CACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2212.0020200000000
........GCGCCGTTTATGTGGCACCC------CAGCCG..............................................................................................................................................................................................................................................................................................................................2612.0020200000000
........................ACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2112.0020200000000
.............GTTTATGTGGCACCC------CAGCCGGAAGGA........................................................................................................................................................................................................................................................................................................................2712.0020200000000
......................GCACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2312.0020200000000
....................................GCCGGAAGGACGTGCAGCCGCC............................................................................................................................................................................................................................................................................................................2212.0020200000000
...................................AGCCGGAAGGACGTGCAGCCGC.............................................................................................................................................................................................................................................................................................................2212.0020200000000
......................GCACCC------CAGCCGGAAGGACGT.....................................................................................................................................................................................................................................................................................................................2112.0020200000000
.................ATGTGGCACCC------CAGCCGGAAGGA........................................................................................................................................................................................................................................................................................................................2312.0020200000000
..........GCCGTTTATGTGGCACCC------CAGCC...............................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................AGCCGGAAGGACGTGCAGCC...............................................................................................................................................................................................................................................................................................................2011.0010100000000
...............TTATGTGGCACCC------CAGCCGGAAG..........................................................................................................................................................................................................................................................................................................................2311.0010010000000
.................ATGTGGCACCC------CAGCCGGAAGGAC.......................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......CGCGCCGTTTATGTGGCACCC------....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
CTACGAGCGCGCCGTTTAT...................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............TTATGTGGCACCC------CAGCCGGAAGGAC.......................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................................AGCCGGAAGGACGTGCAGC................................................................................................................................................................................................................................................................................................................1911.0010000001000
CTACGAGCGCGCCGTTTATGTGGC..............................................................................................................................................................................................................................................................................................................................................2411.0010000100000
.....................................CCGGAAGGACGTGCAGCCGC.............................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................GCCGGAAGGACGTGCAGCCGC.............................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................CACCC------CAGCCGGAAGGACGTGCA..................................................................................................................................................................................................................................................................................................................2311.0010100000000
................TATGTGGCACCC------CAGCCGGAAGGACGT.....................................................................................................................................................................................................................................................................................................................2711.0010100000000
....GAGCGCGCCGTTTATGTGG...............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................GGCACCC------CAGCCGGAAGGACGTGCAGC................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................GCCGGAAGGACGTGCAGCCGCCT...........................................................................................................................................................................................................................................................................................................2311.0010100000000
.....AGCGCGCCGTTTATGTGGCACCC------CAGC................................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................GCCGGAAGGACGTGCAGC................................................................................................................................................................................................................................................................................................................1811.0010100000000
.............GTTTATGTGGCACCC------CAGCC...............................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................ATGTGGCACCC------CAGCCGGAAGGACGTG....................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................CAGCCGGAAGGACGTGCAGC................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........GCCGTTTATGTGGCACCC------CA..................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................TATGTGGCACCC------CAGCCGGAAGGA........................................................................................................................................................................................................................................................................................................................2411.0010100000000
................TATGTGGCACCC------CAGCCGGAA...........................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............TTTATGTGGCACCC------CAGCCGGAAGGA........................................................................................................................................................................................................................................................................................................................2611.0010000001000
............CGTTTATGTGGCACCC------CAGCC...............................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......CGCGCCGTTTATGTGGCACCC------C...................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................CCGGAAGGACGTGCAGCCGCC............................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................AGCCGGAAGGACGTGCAGCCGCC............................................................................................................................................................................................................................................................................................................2311.0010100000000
......GCGCGCCGTTTATGTGGCACCC------CAGC................................................................................................................................................................................................................................................................................................................................2611.0011000000000
....GAGCGCGCCGTTTATGTG................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......GCGCGCCGTTTATGTGGCACCC------CA..................................................................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
CTACGAGCGCGCCGTTTATGTGGCACCC------CAGCCGGAAGGACGTGCAGCCGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................C------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................1812.002200000
.............GTTTATGTGGCACCC------CAGCCGGAAGGA........................................................................................................................................................................................................................................................................................................................2711.001001000
CTACGAGCGCGCCGTTTATGTGGCAC............................................................................................................................................................................................................................................................................................................................................2611.001001000
...CGAGCGCGCCGTTTATGTGG...............................................................................................................................................................................................................................................................................................................................................2011.001000001
.............GTTTATGTGGCACCC------CAGCCG..............................................................................................................................................................................................................................................................................................................................2111.001001000
.......................CACCC------CAGCCGGAAGGACGTGC...................................................................................................................................................................................................................................................................................................................2211.001010000
.................ATGTGGCACCC------CAGCCGGAA...........................................................................................................................................................................................................................................................................................................................2011.001001000
.............GTTTATGTGGCACCC------CAGCCGGAAG..........................................................................................................................................................................................................................................................................................................................2511.001001000
droWil2
CTATCAGCGTGCCATCTATGTGAATCCCCAAGTACAGCCCGAAAGTCGTGCAGCTGGTAAGAC--A--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................TATGTGAATCCCCAAGTACAGCC...............................................................................................................................................................................................................................................................................................................................2317.00706010
................TATGTGAATCCCCAAGTACAGCCCG.............................................................................................................................................................................................................................................................................................................................2515.00503110
................TATGTGAATCCCCAAGTACAGCCC..............................................................................................................................................................................................................................................................................................................................2414.00403010
.................ATGTGAATCCCCAAGTACAGCCC..............................................................................................................................................................................................................................................................................................................................2314.00403010
.............ATCTATGTGAATCCCCAAGTACAGCCC..............................................................................................................................................................................................................................................................................................................................2713.00302010
..ATCAGCGTGCCATCTATGTG................................................................................................................................................................................................................................................................................................................................................2013.00301020
...............................GTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................1813.00301020
................TATGTGAATCCCCAAGTACA..................................................................................................................................................................................................................................................................................................................................2013.00303000
CTATCAGCGTGCCATCTATGT.................................................................................................................................................................................................................................................................................................................................................2113.00302010
.................................ACAGCCCGAAAGTCGTGC...................................................................................................................................................................................................................................................................................................................1813.00302010
...............CTATGTGAATCCCCAAGTACAGCCC..............................................................................................................................................................................................................................................................................................................................2513.00302010
..............................AGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................1912.00201010
.............ATCTATGTGAATCCCCAAG......................................................................................................................................................................................................................................................................................................................................1912.00202000
....................................GCCCGAAAGTCGTGCAGCTGC.............................................................................................................................................................................................................................................................................................................2112.00200200
.............ATCTATGTGAATCCCCAAGTACA..................................................................................................................................................................................................................................................................................................................................2312.00202000
.............ATCTATGTGAATCCCCAAGTACAGCC...............................................................................................................................................................................................................................................................................................................................2612.00202000
...............CTATGTGAATCCCCAAGTACA..................................................................................................................................................................................................................................................................................................................................2112.00202000
.............................AAGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................2012.00202000
.TATCAGCGTGCCATCTATGTGA...............................................................................................................................................................................................................................................................................................................................................2212.00200110
...............................GTACAGCCCGAAAGTCGTGCA..................................................................................................................................................................................................................................................................................................................2112.00201010
.................ATGTGAATCCCCAAGTACAGC................................................................................................................................................................................................................................................................................................................................2112.00210010
......................AATCCCCAAGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................2711.00101000
....................................GCCCGAAAGTCGTGCAGCT...............................................................................................................................................................................................................................................................................................................1911.00101000
....CAGCGTGCCATCTATGTGA...............................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................AGCCCGAAAGTCGTGCAGC................................................................................................................................................................................................................................................................................................................1911.00100010
...............................GTACAGCCCGAAAGTCGTG....................................................................................................................................................................................................................................................................................................................1911.00100010
...TCAGCGTGCCATCTATGTGA...............................................................................................................................................................................................................................................................................................................................................2011.00100010
..................................CAGCCCGAAAGTCGTGCAGCT...............................................................................................................................................................................................................................................................................................................2111.00101000
.......................ATCCCCAAGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................2611.00100100
............................CAAGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................2111.00100010
.................ATGTGAATCCCCAAGTACAGCCCG.............................................................................................................................................................................................................................................................................................................................2411.00101000
........GTGCCATCTATGTGAATCCC..........................................................................................................................................................................................................................................................................................................................................2011.00101000
CTATCAGCGTGCCATCTATGTG................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........TGCCATCTATGTGAATCCCCAA.......................................................................................................................................................................................................................................................................................................................................2211.00100010
...............CTATGTGAATCCCCAAGTACAGCC...............................................................................................................................................................................................................................................................................................................................2411.00101000
.TATCAGCGTGCCATCTATGTG................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................ATCCCCAAGTACAGCCCGA............................................................................................................................................................................................................................................................................................................................1911.00100010
.................ATGTGAATCCCCAAGTACAGCC...............................................................................................................................................................................................................................................................................................................................2211.00100010
...............CTATGTGAATCCCCAAGTAC...................................................................................................................................................................................................................................................................................................................................2011.00101000
....CAGCGTGCCATCTATGTGAATCCCC.........................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................GTACAGCCCGAAAGTCGTGC...................................................................................................................................................................................................................................................................................................................2011.00101000
CTATCAGCGTGCCATCTATGTGAATCCC..........................................................................................................................................................................................................................................................................................................................................2811.00100010
...................................AGCCCGAAAGTCGTGCAGCT...............................................................................................................................................................................................................................................................................................................2011.00100100
.................ATGTGAATCCCCAAGTACA..................................................................................................................................................................................................................................................................................................................................1911.00101000
............................CAAGTACAGCCCGAAAGTCGTGC...................................................................................................................................................................................................................................................................................................................2311.00101000
................................TACAGCCCGAAAGTCGTGCAGC................................................................................................................................................................................................................................................................................................................2211.00101000
............................CAAGTACAGCCCGAAAGTCGTG....................................................................................................................................................................................................................................................................................................................2211.00101000
.....................GAATCCCCAAGTACAGCCCGAAAGTCGT.....................................................................................................................................................................................................................................................................................................................2811.00101000
..............TCTATGTGAATCCCCAAGT.....................................................................................................................................................................................................................................................................................................................................1911.00101000
................TATGTGAATCCCCAAGTACAGC................................................................................................................................................................................................................................................................................................................................2211.00101000
..........................CCCAAGTACAGCCCGAAAGTCGTG....................................................................................................................................................................................................................................................................................................................2411.00101000
............................CAAGTACAGCCCGAAAGT........................................................................................................................................................................................................................................................................................................................1811.00100010
.TATCAGCGTGCCATCTATGT.................................................................................................................................................................................................................................................................................................................................................2011.00100010
...................GTGAATCCCCAAGTACAGCC...............................................................................................................................................................................................................................................................................................................................2011.00101000
...............CTATGTGAATCCCCAAGTA....................................................................................................................................................................................................................................................................................................................................1911.00101000
..ATCAGCGTGCCATCTATGT.................................................................................................................................................................................................................................................................................................................................................1911.00100010
...............CTATGTGAATCCCCAAGTACAGC................................................................................................................................................................................................................................................................................................................................2311.00101000
....CAGCGTGCCATCTATGTGAAT.............................................................................................................................................................................................................................................................................................................................................2111.00100010
....CAGCGTGCCATCTATGTG................................................................................................................................................................................................................................................................................................................................................1811.00100010
.......................ATCCCCAAGTACAGCCCGAAAGTCGTGC...................................................................................................................................................................................................................................................................................................................2811.00100010
..ATCAGCGTGCCATCTATGTGA...............................................................................................................................................................................................................................................................................................................................................2111.00100010
droVir3
CTACGAGCGTACCATCTATGTCGAGCCT------TTGCCAGAAAGCCGTTCTGCCGGTGAGTATCG--------ATCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........ACCATCTATGTCGAGCCT------TTGC................................................................................................................................................................................................................................................................................................................................2213.003200000000000000000000000000000000000000000000000000000000000010
.....................CGAGCCT------TTGCCAGAAAGC........................................................................................................................................................................................................................................................................................................................1912.002000000000000001010000000000000000000000000000000000000000000000
..........................CT------TTGCCAGAAAGCCGTTCTGCC...............................................................................................................................................................................................................................................................................................................2312.002000000000000000011000000000000000000000000000000000000000000000
........................GCCT------TTGCCAGAAAGCCGTT....................................................................................................................................................................................................................................................................................................................2012.002000000000000000110000000000000000000000000000000000000000000000
............CATCTATGTCGAGCCT------TTGCC...............................................................................................................................................................................................................................................................................................................................2112.002001000000000000000100000000000000000000000000000000000000000000
CTACGAGCGTACCATCTAT...................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
CTACGAGCGTACCATCTATGT.................................................................................................................................................................................................................................................................................................................................................2112.002000100000000000001000000000000000000000000000000000000000000000
.....................CGAGCCT------TTGCCAGAAAGCC.......................................................................................................................................................................................................................................................................................................................2012.002001000000000001000000000000000000000000000000000000000000000000
CTACGAGCGTACCATCTATGTCGAGC............................................................................................................................................................................................................................................................................................................................................2612.002000000000000000010000000000000000000000000000000000000000000010
............CATCTATGTCGAGCCT------TTGC................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000020
CTACGAGCGTACCATCTATGTCGA..............................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000000000000000000000000000000000000000000000010
........GTACCATCTATGTCGAGCCT------TTGC................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000010000000000000000000000000000000000000010
...................GTCGAGCCT------TTGCCAGAAAGC........................................................................................................................................................................................................................................................................................................................2112.002010000000000000000000000000000000000000000000000000000000000010
........GTACCATCTATGTCGAGC............................................................................................................................................................................................................................................................................................................................................1812.002010000000000000000000010000000000000000000000000000000000000000
.............ATCTATGTCGAGCCT------TTGCC...............................................................................................................................................................................................................................................................................................................................2012.002100000000000000000000000000000000000000000000000000000000000010
.............ATCTATGTCGAGCCT------TTGC................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001000000000000000000000000000000000000000000010
.............ATCTATGTCGAGCCT------TTG.................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
.......................AGCCT------TTGCCAGAAAGCCGTTC...................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............CTATGTCGAGCCT------TTGCCAG.............................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
CTACGAGCGTACCATCTATGTCGAGCCT------T...................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.......................AGCCT------TTGCCAGAAAGCCGTTCTGCCG..............................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
.............ATCTATGTCGAGCCT------TTGCCA..............................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
........GTACCATCTATGTCGAGCC...........................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
................TATGTCGAGCCT------TTGCCAGAAAG.........................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
.......CGTACCATCTATGTCGAGCCT------T...................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................CAGAAAGCCGTTCTGCCG..............................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
.............ATCTATGTCGAGCCT------TTGCCAGA............................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
CTACGAGCGTACCATCTATGTC................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............ATCTATGTCGAGCCT------TTGCCAGAAAGC........................................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
.....................CGAGCCT------TTGCCAGAAAGCCGTT....................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
.....AGCGTACCATCTATGTCGA..............................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...................GTCGAGCCT------TTGCCAGAAA..........................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......GCGTACCATCTATGTCGAGCCT------....................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........GTACCATCTATGTCGAGCCT------TTGCC...............................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
....GAGCGTACCATCTATGTCG...............................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......................GAGCCT------TTGCCAGAAAGCCGT.....................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.......CGTACCATCTATGTCGAGCCT------....................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................ATGTCGAGCCT------TTGCCAGAAA..........................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................CCAGAAAGCCGTTCTGCCGGCT...........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
........GTACCATCTATGTCGAGCCT------TTGCCA..............................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
............CATCTATGTCGAGCCT------TTGCCAG.............................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
..ACGAGCGTACCATCTATGTCG...............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
...................GTCGAGCCT------TTGCCAGAAAGCC.......................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..................TGTCGAGCCT------TTGCCAGAA...........................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
...............CTATGTCGAGCCT------TTGCCAGAAA..........................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.TACGAGCGTACCATCTATGTCGAGC............................................................................................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
....................................GCCAGAAAGCCGTTCTGCC...............................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
...............CTATGTCGAGCCT------TTGCCAGAAAGC........................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
.......................AGCCT------TTGCCAGAAAGCCGTT....................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
...............CTATGTCGAGCCT------TTGCCA..............................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.................ATGTCGAGCCT------TTGCCAGAAAGC........................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
droMoj3
CTACGAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
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Generated: 05/18/2015 at 04:17 PM