ID:

dsi_14156

 Coordinate:

3l:4757404-4757553 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.3 -5.3 -4.8

Flybase annnotation

CDS [3l_4757554_4757752_-]; exon [3l_4757554_4757752_-]; intron [3l_4757169_4757553_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAAAATTTCATAAATTCAATTGTATCTAACTTCGGTACAGAGAACATAACGTAAGCATGATTCAAATTATTACCAACACCCATTTGTTCTCGACTTTAATTCCTGTTTTTGTTAATGTTTTTGATGTTATGCTATAGTTTCGAGTGTAGAATTGGTTTTTATTTGAGTTGATTTCGTTACTCCTTTTCGTAGTTCTAGTTTGAATTGTTCAAGCGAGCTGCCTTATGGTTTGTAAATATATAAACTTTCT
******************************************************************************************************************************************...(((((..((((((((((......))))))))))...)))))..............****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 M023
head
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 M053
female body
..........................................................................................................................................TTCGAGTGTAGAATTGGTTTTTATT....................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTTCGAGTGTAGAATTGGTTTTTATT....................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
................................CGGTACAGAGAACATAA......................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................TATGCTATAGTTTCGAGCGTAGAA................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.........................CTAACTTCGGTACAGAGAACATAACCGA..................................................................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............TCAATTGTATCTAACTTCGGTA..................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................TCGGTACAGAGAACATAAC........................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...................TTGTATCTAACTTCGGTA..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................TTCGGTACAGAGAACATAACGTAAGCA................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TACTCCTTTTCGTAGTTCTAGTTTGAA.............................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................TAGTTTCGAGCGTAGAATTGGTTTTTATT....................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................ACTTCGGTACAGAGAACATAACC....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................ATCTAACTTCGGTACAGAGAACATAAC........................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GTTACTCCTTTTCGTAGTTCT...................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................TGTATCTAACTTCGGTAC.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................TGCTATAGTTTCGAGTGTAGAAT.................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................TATAGTTTCGAGTGTAGA.................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TTCGAGTGTAGAATTGGTTTT........................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................TATCTAACTTCGGTCC.................................................................................................................................................................................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0
......................................AGAGAACATAACGTA..................................................................................................................................................................................................... 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AGTTGACTTCGTTCCTCCTA................................................................. 20 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................AGGGGAGAATTGGTTTTT.......................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0
....................TGTGTCTAACTTCGGTAAAAA................................................................................................................................................................................................................. 21 3 12 0.08 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................TTGATTACGCTACTACTTTT............................................................... 20 3 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................AGTTTCGAGTGTCGA.................................................................................................... 15 1 15 0.07 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................TTCGAATGTAGAGTGGGTTT............................................................................................ 20 3 17 0.06 1 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................TTTTTATTTGTCTTGATTTAGT......................................................................... 22 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CTTTTAAAGTATTTAAGTTAACATAGATTGAAGCCATGTCTCTTGTATTGCATTCGTACTAAGTTTAATAATGGTTGTGGGTAAACAAGAGCTGAAATTAAGGACAAAAACAATTACAAAAACTACAATACGATATCAAAGCTCACATCTTAACCAAAAATAAACTCAACTAAAGCAATGAGGAAAAGCATCAAGATCAAACTTAACAAGTTCGCTCGACGGAATACCAAACATTTATATATTTGAAAGA
******************************************************...(((((..((((((((((......))))))))))...)))))..............****************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.........................................................................................................................................................................................AAGTTTCAAGAGCAAACTTA............................................. 20 3 20 2.10 42 37 5 0 0
..........................................................................................................................................................................................AGTTTCAAGATCAAACTTA............................................. 19 2 6 0.17 1 0 0 1 0
................................................................TTAATAATAGTTGTG........................................................................................................................................................................... 15 1 20 0.10 2 0 0 0 2
........................................................................................................................................................................................GAAGTTTCAAGATCAAACTT.............................................. 20 3 13 0.08 1 1 0 0 0
..............................................ATTGCATGCGGACTAA............................................................................................................................................................................................ 16 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4757354-4757603 - dsi_14156 GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCT
droSec2 scaffold_2:4798209-4798458 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAATTAT--AT----------------------------AA-----ACTTTCT
dm3 chr3L:4811857-4812106 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--TCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AA----------------------------AA-----ACTTTCT
droEre2 scaffold_4784:7530210-7530458 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTCT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCT-TT-------CG--------------------------TAGTATT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCT
droYak3 3L:5395182-5395436 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT--T--T-TGTTCTCGACTTTAA-----------------TTCCT--T----GTTTAT------GTTAATGTTTTT-----------------------------------G----------TTGTTATTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTTT-----------------------------------------GGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCC
droEug1 scf7180000409466:2595207-2595465 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-A-C--AAA------TTTTTACC----------------AACAC---------CC-AT--T--T-TGTTCTCGAATTTAA-----------------TTCCT-------GTTGTTGTTATTGTTGATGTTTTT------------------------------------------------GATGTTAT--ACT--ATCGTT---CTGAGTGTAGAA-------ATTGGTTTT------------CATT-----TGAGTT---GATTT-TGTTATTAC---TTTTT-----TTG--------------------------TAGTTTT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------AA-----ACTTTCT
droBia1 scf7180000302428:2167650-2167889 + GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTTTTACC----------------CACAA--------ACC-AT--T--T-TGTTATCGACCTTAA-----------------CTCCT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCT--TTAGTT---TCGAGTGTAGAA-------ATTCGTTTT------------TATT-----TCCGTT---T-----------------TTTT-------TG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTGTGGTTTGTAAATAT--TT----------------------------GA-----ACTTTCC
droTak1 scf7180000415941:783678-783931 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTACTT----------------------------------------------TTATCGACCTTAA-----------------TTCCT-------GTTCTT------GTTGATGTTAT---------------------------------TTTG----------TTGATGTTAT--GCC--TTAGTT---TCGAGTGTAGAA-------ATTGGTTTT------------CCCT-----TGAGTTGTTGATTT-CGTTGTTAC---TTTTTTTTGTATG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATATATTT----------------------------GA-----ACTTTCT
droEle1 scf7180000491249:5761384-5761634 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC-------ACCC-AT--T--T-TTT-------------------------------TTT-------GTTCTT------GTTGATGTTTTT-----------------------------------T----------TTGATGTTAT--GCC--ATAGTTC--TTGTGTGTAGAA-------ATTGGTTTT------------TATT-----TGAGTT---------TGTTGTTACT---TTCT-----ATG---TAGTTTTAT--------------TAGTTTG-----------------------------------------AGTTTGAATTG---------------T---T-----TAAGCCA---------------AGCTGC----------------------CTTATGGTTTGTAAATAT--TG----------------------------AA-----ACTTTCT
droRho1 scf7180000779364:31109-31358 + GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-ATC--AAA------TTTTTACC----------------AACAC---------CC-AT--TTTT-TGTTCTCGACTTTAA-----------------TTTTT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TTGAGTGTAGAA-------ATTGGTTTT------------CATT-----TGAGTT---GAATT-TGTTATTAC---CTCT-------TG--------------------------TAGTTTT-----------------------------------------GGTTTGAATTG---------------T---T-----CAAGCGAGCAAACCAAAA-------GGC----------------------------GTTTGTAAATAT------------------------------------------TTCT
droFic1 scf7180000454065:754701-754949 + GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAAA-ACATAACG-TAAGCATGA-A-C--AAA------TTTTTACC----------------AACAT---------CC-AT--T--T-TGTTCCCGACTTTAA-----------------TACTT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCTAAATAGTT---TTGAGTGTAGAA-------ACTGGTTTT------------CATT-----TGAGTT---GATTT-CGTT---AC----TTT-------TG--------------------------TAGTTCT-----------------------------------------ATTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------GA-----ACTTTCC
droKik1 scf7180000302486:33064-33310 + GAA-AATTTCATAAATTCAATTGTATCTAAC-TTTGGTAC-AGAGA-ACATAACG-TAAGCATGA-AAC--CAA------TTTATTTC----------------AACAC---------CC-ACATTTCT-CGTTCTCGTT-----------------------CC------------CTC------GT---------T------------------------------------------------GACGTTATTCGCC--ATAGTT---TTGAGCGTAGAA-------ATTGGTTTT------------TATCAGT--TGAGTTCTTTATTT-TGTTGTTGC---CTTC-------TG--------------------------TAGTCCTG----------------------------------------TTTTTGAATTG---------------T---T-----TAAGCGAG--------------AGCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------AT-----AATTTCT
droAna3 scaffold_13337:2904728-2905012 - dan_2376 GAA-AATTTTATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAG------TTATTACC----------------AACAC--AAAACACCC-AT--T--T-TGTTCTCGACTCAAA-----------------ATCCAGTTGTTTCTTGTT------GTTGATGTTTTTGATATTGATATTGATA-----------------TTG----------ATATTGTTAT--GGC--CTAGTT---TTGAGCGTAGAA-------ATTGGATTT------------CATT-----TGA-TT---GATTT-CGTT---A---------------CG--------------------------TAGTTTTGTTTT------------------------------------CTTTACAATTT---------------T---A-----CAAGCGA----------------GCTGT----G----------------CCCTATGGTTTGTAAATAT--TT----------------------------GT-----ACTTCCT
droBip1 scf7180000396378:211629-211887 - GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-ACC--AAG------TTATTACC----------------AACAC-CC--ACACCC-AT--T--T-CGTTCTCGACTCGAA-----------------T-CCAGTTGT---TTCTC------GTTGATGTTTTTGAT-----------------------------GTTG----------ATGCTGTTAT--GCC--CTAGTT---TTGAGAGTAGAA-------ATTGGATTT------------TGTT-----TG--------ATTT-TGTT---G---------------CG--------------------------TAGTTTT-----------------------------------------G-------------------------TTTCA-----CAGGCGA----------------GCTGCGGCCG----------------CCCTATGGTTTGTAAATAT--TT----------------------------GCAAT--ACTCTCT
dp5 XR_group8:2959687-2960026 - GAA-AATTTCATTAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAATTCA-ATTATTACC----------------CAAAA-C---ACACAC-AT--T--T-TGTTCTCAAATT-A-CGAGTGTATTTCTTTTGTTCCT-------GTTCCT------GTTCTTGTTCT---------------------------------TCTGTTGTTCAAGT-----TTTGT--GCT--TTGGCTCTTTGGAGCGTAGAAAAACTGAATTGGATTT------------CATT-----TGAGTT---GACTTTTGATTTTACCCGTTT----------ACGTTGTTTTTTTTGTTTGTTCTTCGTAGTTTT-----------------------------------------CTATTGAATTG---------------A--AT-----TAAGCGA----------------GCT----------------------------------GTAAATAT--GTACCCCACATCCTTCTGTAACTGTAACTTTA-----ACTTTC-
droPer2 scaffold_24:93551-93900 + GAAAAATTTCATTAATTCAATTGTATCTAACCTTCGGTACCCGAGAAACATAACGGTAAGCATGGAAAC--AAATTCAAATTATTACC----------------CAAAA-CA--ACACACGAT--T--TTGGTTCTCAAAATTA-CGAGTGTATTTCTTTTGTTCCT-------GTTCCT------GTTCTTGTTCT---------------------------------TCTGTTGTTCAAGT------TTGT--GCT--TTGGCTCTTTGGAGCGTAGAAAAACTGAATTGGATTT------------CATT-----TGAGTT---GACTTTTGATTTTACCCGTTT----------ACGTTGTTTTTTTTGTTTGTTTTTCGTAGTTTT-----------------------------------------CTATTGAATTG---------------A--AT-----TAAGCGA----------------GCTG----------------------------------TAAATAT--GTTCCCCACATCCTTCTGTAACTGTAACTTTA-----ACTTTC-
droWil2 scf2_1100000004511:10505187-10505462 + GAA-AATTTCATAAACTCAATTGTATCTAAC-TTTGGTAC-CGAGC-ATATAACG-TAAGCATGA-AAATCAA--------TCGTTTT----------------AATAATC-----AATC-AA--A--T-T---CTT-----TAT-----------------TTCAC-------TTTGTT---------GTTACTTTTGATTAT-TTATTGTTGTTCTTGTTGTTTTCTTTTCG----------TTGATGTT----------------------------------------------------------TATT-------AGTT---GATTT-CTT----------------------------------------------------------TTGTTTACACTTTGAGTAGATTTTCAAATTGGAGTTATACTTTCAATTTTGTTTTGTTTTTCTGGTTCCCAGTTCAATC----------------------------------------------------TTTGTAAATAT--TA----------------------------TT-----ACTATCC
droVir3 scaffold_12758:509204-509430 - dvi_2166 GAA-AATTTCATTAATTCAATTGTATCTAAC-TTTGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AGAT-----TTATTCCT----------------CTTTT---------TC-TT--T--T-CGTTC-CGATTTGAC-----------------ATCCT-------CTTCT-------GTTTT------------------------------------------------------------TTT--TTT--T---TTTTATGGAGCCTAGAA-------ATTCTCCTC------TT----TATTAGTTATGA------GATTT-TGTTCTTTC------C-------CG---------------------------------------------------------------------------------------------------------------TAGCGT----------------GCTGC----------------------GTT---GTCTGTAAATAT--TT----------------TATTTGTTGTGTTT------GCTTTT
droMoj3 scaffold_6680:1595877-1596105 - GAA-AATTTCATTAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTTT-AC--ATTTTG---------TTTTT---------CT-TT--T--T-TGTTCTCGAATTGAT-----------------TT------------------------------TTT-----------------------------------CC----------TTGATTTTTT--GTT--TTTA-C---TGAAGAGTAGAA-------AATT--ATT------------CTGT-----TGAG------AT-T-TGTTT--T------CC-------CG--------------------------TAGTTTT-----------------------------------------TG--TGAAT-G---------------A---T-----TAAGCGA----------------GCTGC----------------------GTT---GTCTGTAAATAT--TA----------------------------TTTATGTTGCTCCT
droGri2 scaffold_15110:955756-956031 + GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAATCAAA------TTATTATACATTTTCTTTTAATTCCACAC---------AC-AC--T--T-TGTTCTCGAATGGAA-----------------TTTAT-------ATATTT------TTTATTGTTT---------------------------------------------------------------------TT---TGGAGAGTAGAA-------ATTGGTATTCTCTTCTTCGTTTGCC-----TGAGTT---TATTT-C--------------T-------TG--------------------------TAGATTT-----------------------------------------GTTGTGAATAA---------------T---A-----AAA---------AAAAAAAGCGGGCTGTTTTTTTTTTGTTATTTGTTTGTATTG-TGTATGTAAATAT-----------------------------------------TGTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................T---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----........................................................................................................................................................................................................................................................................2512.00200000020000000000
.........................................................................................................................................................................................................................................................................TT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----........................................................................................................................................................................................................................................................................2612.00200000020000000000
..................................CGGTAC-AGAGA-ACATAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
................TCAATTGTATCTAAC-TTCGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
.................................TCGGTAC-AGAGA-ACATAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
....................TTGTATCTAAC-TTCGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
................................TTCGGTAC-AGAGA-ACATAACG-TAAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................T---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------AGTTTGAA..............................................................................................................................................2711.00100000010000000000
.............................AC-TTCGGTAC-AGAGA-ACATAACC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
........................ATCTAAC-TTCGGTAC-AGAGA-ACATAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................GTT---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------......................................................................................................................................................2111.00100000000010000000
.....................TGTATCTAAC-TTCGGTAC-..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.............................................................................................................................................................................................................................................................T--GCT--ATAGTT---TCGAGTGTAGA--------AT....................................................................................................................................................................................................................................................................................................2311.00100000010000000000
..................................................................................................................................................................................................................................................................T--ATAGTT---TCGAGTGTAGA--------......................................................................................................................................................................................................................................................................................................1811.00100000010000000000
..........................................................................................................................................................................................................................................................................T---TCGAGTGTAGA--------ATTGGTTTT------------.................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................................AGAGA-ACATAACG-TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000010000000000
droSec2
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTCT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAATTAT--AT----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................ATCTAAC-TTCGGTAC-AGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--TCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AA----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................ATCTAAC-TTCGGTAC-AGAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................T---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----........................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCTAAC-TTCGGTAC-AGAGA-ACAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCTAAC-TTCGGTAC-AGAGA-ACATAACC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................ATCTAAC-TTCGGTAC-AGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---........................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AC-TTCGGTAC-AGAGA-ACATAACC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TCTCGACTTTAA-----------------TTCCT-------GTTTTT------GT...........................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TTATTACC----------------AACAC---------CC-AT-----T-TGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTT------------TATT-----TGAGTT---GATTT-CGTT---ACT...............................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................TTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTG................................................................................................................................................1912.0020000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAATGTTTTT------------------------------------------------GATGTTAT--TCT--ATAGT.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................T---ACTCCTTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGA...............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CATAAATTCAATTGTATCTAAC-TTCGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------G..........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATG.............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCTAAC-TTCGGTAC-AGAGA-ACATAACC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC----------------------CTTATGGTTTGTAAATAT--............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTTTT------------------------------------------------GATGTTAT--TCT--ATAGTT---TCGAGT...................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................T-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------.............................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGC.............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................AC-TTCGGTAC-AGAGA-ACATAACG-TAAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------C...............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGTTAT--TCT--ATAGTT---TCGAGTGTAGA--------A.....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATTTCATAAATTCAATTGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGC.............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................TTCGGTAC-AGAGA-ACATAACG-TA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TCCTTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................T------------TATT-----TGAGTT---GATTT-CGTT---..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAATTGTATCTAAC-TTCGGTAC-AGAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AACAC---------CC-AT-----T-TGTTCTCGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................T---TCGAGTGTAGA--------ATTGGT................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T--ATAGTT---TCGAGTGTAGA--------ATTGGT................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................TT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TTTAA-----------------TTCCT-------GTTTTT------GTTAATGT.....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................T---GATTT-CGTT---ACTCCTTTT-------TG--------------------------TAGT..................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGT....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTC......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................TAGA--------ATTGGTTTT------------TATT-----TGAGTT---GAT............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------...........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................T---ACTCCTTTT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAA..............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................TT-CGTT---ACTCCTTTT-------TG--------------------------TAGTT.................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TCGAGTGTAGA--------ATTGGTTTT------------TATT-----........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TT-------TG--------------------------TAGTTTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGC.............................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC----------------------CTTATGGTTTGTAAATAT--AA----------------------------AA-----ACT....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ATCTAAC-TTCGGTAC-AGAGA-ACATAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TCT--ATAGTT---TCGAGTGTAGA--------ATTGGT................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AC-TTCGGTAC-AGAGA-ACATAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................................TAGTT---TCGAGTGTAGA--------ATT...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TTAATGTTTTT------------------------------------------------GATGTTAT--TCT--ATAGTT---.........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AAATTCAATTGTATCTAAC-TTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTTTT------GTTAATGTTTTT------------------------------------------------GATGTTA..........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTT-----------------------------------------AGTGTGAATTG---------------T---T-----CAAGCGA----------------GC.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................ATAGTT---TCGAGTGTAGA--------CAC...................................................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT-----T-TGTTCTCGACTTTAA-----------------TTCCT-------GTTTTT------GTTAATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTCT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCT-TT-------CG--------------------------TAGTATT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................ATCTAAC-TTCGGTAC-AGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
............AAATTCAATTGTATCTAAC-TTCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...........................TAAC-TTCGGTAC-AGAGA-ACATAACC-G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................................ATAGTT---TCGAGTGTAGA--------ATTGGTT...............................................................................................................................................................................................................................................................................................2411.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTA............................................................2511.0010000010
...............................................ACATAACG-TAAGCATGA-TTC--AAA------TTATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
droYak3
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-AGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC---------CC-AT--T--T-TGTTCTCGACTTTAA-----------------TTCCT--T----GTTTAT------GTTAATGTTTTT-----------------------------------G----------TTGTTATTAT--GCT--ATAGTT---TCGAGTGTAGA--------ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGTT---ACTCCTTTT-------CG--------------------------TAGTTTT-----------------------------------------GGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--AT----------------------------AA-----ACTTTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............ATTCAATTGTATCTAAC-TTCGGTAC-A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................ATCTAAC-TTCGGTAC-AGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGG.........................................................2311.00101000000000
.................................................................................................................................................................................................................................................................................................ATTGGTTTT------------TATT-----TGAGTT---GATTT-CGT......................................................................................................................................................................................................................................................2711.00101000000000
........................ATCTAAC-TTCGGTAC-AGAGA-ACATAACC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
......................GTATCTAAC-TTCGGTAC-AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..................AATTGTATCTAAC-TTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................CAATTGTATCTAAC-TTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-A-C--AAA------TTTTTACC----------------AACAC---------CC-AT--T--T-TGTTCTCGAATTTAA-----------------TTCCT-------GTTGTTGTTATTGTTGATGTTTTT------------------------------------------------GATGTTAT--ACT--ATCGTT---CTGAGTGTAGAA-------ATTGGTTTT------------CATT-----TGAGTT---GATTT-TGTTATTAC---TTTTT-----TTG--------------------------TAGTTTT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotal
No Reads
droBia1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTTTTACC----------------CACAA--------ACC-AT--T--T-TGTTATCGACCTTAA-----------------CTCCT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCT--TTAGTT---TCGAGTGTAGAA-------ATTCGTTTT------------TATT-----TCCGTT---T-----------------TTTT-------TG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTGTGGTTTGTAAATAT--TT----------------------------GA-----ACTTTCCSizeHit CountTotal NormTotal
No Reads
droTak1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTACTT----------------------------------------------TTATCGACCTTAA-----------------TTCCT-------GTTCTT------GTTGATGTTAT---------------------------------TTTG----------TTGATGTTAT--GCC--TTAGTT---TCGAGTGTAGAA-------ATTGGTTTT------------CCCT-----TGAGTTGTTGATTT-CGTTGTTAC---TTTTTTTTGTATG--------------------------TAGTTCT-----------------------------------------AGTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATATATTT----------------------------GA-----ACTTTCTSizeHit CountTotal NormTotal
No Reads
droEle1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-TTC--AAA------TTATTACC----------------AACAC-------ACCC-AT--T--T-TTT-------------------------------TTT-------GTTCTT------GTTGATGTTTTT-----------------------------------T----------TTGATGTTAT--GCC--ATAGTTC--TTGTGTGTAGAA-------ATTGGTTTT------------TATT-----TGAGTT---------TGTTGTTACT---TTCT-----ATG---TAGTTTTAT--------------TAGTTTG-----------------------------------------AGTTTGAATTG---------------T---T-----TAAGCCA---------------AGCTGC----------------------CTTATGGTTTGTAAATAT--TG----------------------------AA-----ACTTTCTSizeHit CountTotal NormTotal
No Reads
droRho1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-ATC--AAA------TTTTTACC----------------AACAC---------CC-AT--TTTT-TGTTCTCGACTTTAA-----------------TTTTT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCT--ATAGTT---TTGAGTGTAGAA-------ATTGGTTTT------------CATT-----TGAGTT---GAATT-TGTTATTAC---CTCT-------TG--------------------------TAGTTTT-----------------------------------------GGTTTGAATTG---------------T---T-----CAAGCGAGCAAACCAAAA-------GGC----------------------------GTTTGTAAATAT------------------------------------------TTCTSizeHit CountTotal NormTotal
No Reads
droFic1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAAA-ACATAACG-TAAGCATGA-A-C--AAA------TTTTTACC----------------AACAT---------CC-AT--T--T-TGTTCCCGACTTTAA-----------------TACTT-------GTTCTT------GTTGATGTTTTT------------------------------------------------GATGTTAT--GCTAAATAGTT---TTGAGTGTAGAA-------ACTGGTTTT------------CATT-----TGAGTT---GATTT-CGTT---AC----TTT-------TG--------------------------TAGTTCT-----------------------------------------ATTTTGAATTG---------------T---T-----CAAGCGA----------------GCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------GA-----ACTTTCCSizeHit CountTotal NormTotal
No Reads
droKik1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTTGGTAC-AGAGA-ACATAACG-TAAGCATGA-AAC--CAA------TTTATTTC----------------AACAC---------CC-ACATTTCT-CGTTCTCGTT-----------------------CC------------CTC------GT---------T------------------------------------------------GACGTTATTCGCC--ATAGTT---TTGAGCGTAGAA-------ATTGGTTTT------------TATCAGT--TGAGTTCTTTATTT-TGTTGTTGC---CTTC-------TG--------------------------TAGTCCTG----------------------------------------TTTTTGAATTG---------------T---T-----TAAGCGAG--------------AGCTGC----------------------CTTATGGTTTGTAAATAT--TT----------------------------AT-----AATTTCTSizeHit CountTotal NormTotal
No Reads
droAna3
GAA-AATTTTATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAG------TTATTACC----------------AACAC--AAAACACCC-AT--T--T-TGTTCTCGACTCAAA-----------------ATCCAGTTGTTTCTTGTT------GTTGATGTTTTTGATATTGATATTGATA-----------------TTG----------ATATTGTTAT--GGC--CTAGTT---TTGAGCGTAGAA-------ATTGGATTT------------CATT-----TGA-TT---GATTT-CGTT---A---------------CG--------------------------TAGTTTTGTTTT------------------------------------CTTTACAATTT---------------T---A-----CAAGCGA----------------GCTGT----G----------------CCCTATGGTTTGTAAATAT--TT----------------------------GT-----ACTTCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................AAC-TTCGGTAC-CGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........................ATCTAAC-TTCGGTAC-CGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......................................................................................................................................CTCGACTCAAA-----------------ATCCAGTTGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................CTAAC-TTCGGTAC-CGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................AATTGTATCTAAC-TTCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................AATTGTATCTAAC-TTCGGTAC-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................GACTCAAA-----------------ATCCAGTTCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................19200.255500000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACAATTT---------------T---A-----CAAGCC............................................................................................................1860.171010000
droBip1
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-ACC--AAG------TTATTACC----------------AACAC-CC--ACACCC-AT--T--T-CGTTCTCGACTCGAA-----------------T-CCAGTTGT---TTCTC------GTTGATGTTTTTGAT-----------------------------GTTG----------ATGCTGTTAT--GCC--CTAGTT---TTGAGAGTAGAA-------ATTGGATTT------------TGTT-----TG--------ATTT-TGTT---G---------------CG--------------------------TAGTTTT-----------------------------------------G-------------------------TTTCA-----CAGGCGA----------------GCTGCGGCCG----------------CCCTATGGTTTGTAAATAT--TT----------------------------GCAAT--ACTCTCTSizeHit CountTotal NormTotal
No Reads
dp5
GAA-AATTTCATTAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAATTCA-ATTATTACC----------------CAAAA-C---ACACAC-AT--T--T-TGTTCTCAAATT-A-CGAGTGTATTTCTTTTGTTCCT-------GTTCCT------GTTCTTGTTCT---------------------------------TCTGTTGTTCAAGT-----TTTGT--GCT--TTGGCTCTTTGGAGCGTAGAAAAACTGAATTGGATTT------------CATT-----TGAGTT---GACTTTTGATTTTACCCGTTT----------ACGTTGTTTTTTTTGTTTGTTCTTCGTAGTTTT-----------------------------------------CTATTGAATTG---------------A--AT-----TAAGCGA----------------GCT----------------------------------GTAAATAT--GTACCCCACATCCTTCTGTAACTGTAACTTTA-----ACTTTC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTGTAACTGTAACTTTA-----ACTT...2611.0010100000000
droPer2
GAAAAATTTCATTAATTCAATTGTATCTAACCTTCGGTACCCGAGAAACATAACGGTAAGCATGGAAAC--AAATTCAAATTATTACC----------------CAAAA-CA--ACACACGAT--T--TTGGTTCTCAAAATTA-CGAGTGTATTTCTTTTGTTCCT-------GTTCCT------GTTCTTGTTCT---------------------------------TCTGTTGTTCAAGT------TTGT--GCT--TTGGCTCTTTGGAGCGTAGAAAAACTGAATTGGATTT------------CATT-----TGAGTT---GACTTTTGATTTTACCCGTTT----------ACGTTGTTTTTTTTGTTTGTTTTTCGTAGTTTT-----------------------------------------CTATTGAATTG---------------A--AT-----TAAGCGA----------------GCTG----------------------------------TAAATAT--GTTCCCCACATCCTTCTGTAACTGTAACTTTA-----ACTTTC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................GTAGAAAAACTGAATTGGATTT------------.................................................................................................................................................................................................................................................................................2211.001100000
droWil2
GAA-AATTTCATAAACTCAATTGTATCTAAC-TTTGGTAC-CGAGC-ATATAACG-TAAGCATGA-AAATCAA--------TCGTTTT----------------AATAATC-----AATC-AA--A--T-T---CTT-----TAT-----------------TTCAC-------TTTGTT---------GTTACTTTTGATTAT-TTATTGTTGTTCTTGTTGTTTTCTTTTCG----------TTGATGTT----------------------------------------------------------TATT-------AGTT---GATTT-CTT----------------------------------------------------------TTGTTTACACTTTGAGTAGATTTTCAAATTGGAGTTATACTTTCAATTTTGTTTTGTTTTTCTGGTTCCCAGTTCAATC----------------------------------------------------TTTGTAAATAT--TA----------------------------TT-----ACTATCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................ATCTAAC-TTTGGTAC-CGAGC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.........................................................................................................................................................................................................TAT-TTATTGTTGTTCTTGTTGTT......................................................................................................................................................................................................................................................................................................................................................................2311.00110000
........................................................................................................................................................................................................................CTTGTTGTTTTCTTTTCG----------TT.................................................................................................................................................................................................................................................................................................................................................2011.00100100
droVir3
GAA-AATTTCATTAATTCAATTGTATCTAAC-TTTGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AGAT-----TTATTCCT----------------CTTTT---------TC-TT--T--T-CGTTC-CGATTTGAC-----------------ATCCT-------CTTCT-------GTTTT------------------------------------------------------------TTT--TTT--T---TTTTATGGAGCCTAGAA-------ATTCTCCTC------TT----TATTAGTTATGA------GATTT-TGTTCTTTC------C-------CG---------------------------------------------------------------------------------------------------------------TAGCGT----------------GCTGC----------------------GTT---GTCTGTAAATAT--TT----------------TATTTGTTGTGTTT------GCTTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................TAAC-TTTGGTAC-CGAGA-ACATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000200000000000000000000000000000000000000
............................AAC-TTTGGTAC-CGAGA-ACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...........................TAAC-TTTGGTAC-CGAGA-ACATAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000001000000000000000000000000000000
...................ATTGTATCTAAC-TTTGGTAC-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTAGTTATGA------GATTT-TGTTCTTTC------C-------CG---------------------------------------------------------------------------------------------------------------T................................................................................................................2811.001000010000000000000000000000000000000000000000000000000000000000
.............AATTCAATTGTATCTAAC-TTTGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
............................AAC-TTTGGTAC-CGAGA-ACATAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
GAA-AATTTCATTAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAC--AAA------TTTT-AC--ATTTTG---------TTTTT---------CT-TT--T--T-TGTTCTCGAATTGAT-----------------TT------------------------------TTT-----------------------------------CC----------TTGATTTTTT--GTT--TTTA-C---TGAAGAGTAGAA-------AATT--ATT------------CTGT-----TGAG------AT-T-TGTTT--T------CC-------CG--------------------------TAGTTTT-----------------------------------------TG--TGAAT-G---------------A---T-----TAAGCGA----------------GCTGC----------------------GTT---GTCTGTAAATAT--TA----------------------------TTTATGTTGCTCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................CTAAC-TTCGGTAC-CGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................ATCTAAC-TTCGGTAC-CGAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................ATCTAAC-TTCGGTAC-CGAGA-AC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droGri2
GAA-AATTTCATAAATTCAATTGTATCTAAC-TTCGGTAC-CGAGA-ACATAACG-TAAGCATGA-AAATCAAA------TTATTATACATTTTCTTTTAATTCCACAC---------AC-AC--T--T-TGTTCTCGAATGGAA-----------------TTTAT-------ATATTT------TTTATTGTTT---------------------------------------------------------------------TT---TGGAGAGTAGAA-------ATTGGTATTCTCTTCTTCGTTTGCC-----TGAGTT---TATTT-C--------------T-------TG--------------------------TAGATTT-----------------------------------------GTTGTGAATAA---------------T---A-----AAA---------AAAAAAAGCGGGCTGTTTTTTTTTTGTTATTTGTTTGTATTG-TGTATGTAAATAT-----------------------------------------TGTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................TGGAGAGTAGAA-------ATTGGTA...............................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/18/2015 at 02:13 PM