ID:

dsi_14146

 Coordinate:

2l:16017297-16017562 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.3 -14.9

Flybase annnotation

exon [2l_16017563_16018544_+]; CDS [2l_16017563_16018218_+]; exon [2l_16016745_16017296_+]; CDS [2l_16016745_16017296_+]; intron [2l_16017297_16017562_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAACGTTAACTCCAGCTGTAAGTATACAAACGACAGGCAATTACTTTGTTTATTCCGACGATCTGGTGTAATTTGATGAGTCAGAAAAGTTTTTTATTTGCGTTGGGTATCGATGAAACCCACTGATATAACCAACTTTGTTTAATTGGTATACAACTGTTAATTGTTTTAGAAGCAGCTGTTGAAACAGATTGGCTTAGAAAGTAGCAGGGAATGAGTTATTATATAATAAGTGCTAATGTATTTCGGAACTAATAATTCAGTGCATCTCTTTATTTTCTAGGGTATTACGATGCCCCGTCGATCGCCCCAAGCCTGGACTTCATCAACCTG
**********************************************************************************************************************************************************************************************************..(((........(((((...(((((((((...((((((.........))))))...))).....))))))...)))))..........)))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M024
male body		 SRR902009
testis
 M023
head
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGCCCCA..................... 18 1 1 30.00 30 30 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGCCCCA..................... 16 0 1 19.00 19 19 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCCGTCGATCGCCCCA..................... 19 2 1 17.00 17 17 0 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGG........................................................................................................................................................................................................................................................................... 15 1 13 15.15 197 17 177 0 3 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTCGATCGCCCCA..................... 17 1 2 13.50 27 27 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................CAAGTCCCGTCGATCGCCCCA..................... 21 3 1 13.00 13 13 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATCGCCCCA..................... 15 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTGGATCGCCCCA..................... 16 1 1 12.00 12 2 1 6 3 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCGCCCCA..................... 20 2 1 10.00 10 10 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTGGATCGCCCCA..................... 15 1 1 9.00 9 1 0 6 2 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTGGATCGCCCCA..................... 17 2 8 5.50 44 8 35 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGGTCGCCCCA..................... 16 1 2 2.50 5 4 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTCGCTCGCGCCA..................... 18 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTTCCGTCGATCGCCCCA..................... 18 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCTGTCGATCGCCCCA..................... 18 2 2 2.00 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAGAAGCAGCTGTTGAAACA................................................................................................................................................ 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGGTCGCCCCA..................... 18 2 2 1.50 3 2 0 0 1 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGGT.......................................................................................................................................................................................................................................................................... 16 1 2 1.50 3 0 2 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTGGATCGCCCC...................... 15 1 4 1.25 5 1 0 1 3 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................GCTAATGTATTTCGGAACTAATAATTC........................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................CGAGCCCCGTCGATCGCCCCA..................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTCGTGTA....................................................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................ATCATGTCCCGTCGATCGCCCCA..................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................TATTACGACGGCCCGTCGCT............................ 20 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CCCCGTCGGTCGCCCCA..................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGCCCC...................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGTTCGCCCCA..................... 15 1 2 1.00 2 0 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGCCTCA..................... 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................TACAAAAGACAGGCAGATACTTT.............................................................................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGTTCGCCCCA..................... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................ATCGCCCCAAGCCTGGACTTC......... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGTCCCA..................... 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCTGTTGAAAGAGATTGGCTAACA.................................................................................................................................... 24 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCGCCCC...................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................CAAACGTTAACTCCAGCTGGT......................................................................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGCCCC...................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................TGCCAAACGTTAACTCCAGCC............................................................................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................TGTTGAAACAGATTGGCT........................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGCC........................ 15 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTCGATCGCCCC...................... 17 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCTGTCGATCGCCCCA..................... 16 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................GTCCGACGATCTGGTGTA....................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................GATGCCCCGTCGATCGCCCCA..................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TCCCCGTCGTTCGCCCCA..................... 18 2 4 0.75 3 1 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTTGATCGCCCCA..................... 15 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................GTCCGACGATCTGGT.......................................................................................................................................................................................................................................................................... 15 1 7 0.71 5 0 4 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCTCCCCA..................... 20 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGGTCGCCCCA..................... 15 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGGTGA........................................................................................................................................................................................................................................................................ 18 2 5 0.60 3 0 2 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTTGGTCGCCCCA..................... 18 2 6 0.50 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCCGTCGGTCGCCCCA..................... 19 3 14 0.50 7 5 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TCTCCGTCGATCGCCCCA..................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGCCTCA..................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................GTCCGACGATCTGGGGTA....................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTTGATCGCCCCA..................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................ACCCCGTCGATCGCCC....................... 16 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CTCGTCGATCGCCCCA..................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGGTCGCCCCA..................... 20 3 4 0.50 2 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTCTATCGCTCCA..................... 18 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCTCGTCGATCGCCCCA..................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TGTCCCGTCGTTCGCCCCA..................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTGGATCGCCCC...................... 16 2 20 0.45 9 2 5 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CAGTCCCGTCGATCGCCCCA..................... 20 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CCCCGTCGCTCGCGCCA..................... 17 2 5 0.40 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTTCCGTCGATCGCCCCA..................... 19 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCTGTCGATCGCCCCA..................... 19 3 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................GATGTGTCAGAAAAGTT.................................................................................................................................................................................................................................................. 17 1 3 0.33 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTTGATCGCCCCA..................... 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATCGCCCTA..................... 15 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTGGATCGCCCCAGG................... 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0
....................................................................................AGTCCGACGATCTGGTTTGA...................................................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATCTCCCCA..................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ATCCCCGTCGTTCGCCCCA..................... 19 3 10 0.30 3 0 0 0 0 0 0 0 1 0 2
........................................................................................................................................................................................................................................................................................................................................TCCCGTCGATCGTCCCA..................... 17 2 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.................................................................................TATAGTCCGACGATC.............................................................................................................................................................................................................................................................................. 15 2 20 0.30 6 2 2 0 0 0 0 0 0 2 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATTGCCCCA..................... 15 1 7 0.29 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................TAATGAATTTCGGACATAATA............................................................................ 21 3 7 0.29 2 0 0 0 0 0 0 0 0 2 0
........................................................................................................................................................................................................................................................................................................................................TTCCGTCGATCGCCCCA..................... 17 2 15 0.27 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGCTCCA..................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTTGGTCGCCCCA..................... 16 2 20 0.25 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCGCTCCA..................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCTGTCGATCGCCCCA..................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATTGCCCCA..................... 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACAGATTAGCTTAGAA................................................................................................................................... 16 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCTATCGCCCCA..................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTCACTCGCCCCA..................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCCCCCCA..................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGCCCCGTCGTTCGCGCCA..................... 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................CGTCGATCGCCCCAT.................... 15 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGGTA......................................................................................................................................................................................................................................................................... 17 2 10 0.20 2 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................GTATCCCGTCGATCGCCCCA..................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCCGTCGATCGTCCCA..................... 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................GTGCCCCGTCGCTCGCGCCA..................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCCGTCGATCGCCC....................... 17 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CCCCGTTGGTCGCCCCA..................... 17 2 16 0.19 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATCCCCCCA..................... 15 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TTCCCGTCGATCGCCCCA..................... 18 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CTGTCGATCGCCCCA..................... 15 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATCGCTCCA..................... 15 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GACCCGTCGGTCGCCCC...................... 17 2 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTAGGTCGCCCCA..................... 18 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GCCCCGTCGTCCGCGCCA..................... 18 3 20 0.15 3 1 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCTCGTCGATCGCCCCA..................... 17 2 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................ATTCCCCGTCGCTCACCCCA..................... 20 3 7 0.14 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCCATCGCCCCA..................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AATCCGACGATCTGG........................................................................................................................................................................................................................................................................... 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTCGTTCGCCCCA..................... 17 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................CCCCGTCACTCGCCCCA..................... 17 2 17 0.12 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................GTCCCGTCGATCGTCCC...................... 17 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AGTCCCGTCGATCTCCCCA..................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................TAAGTCCCGTCGATCGCCC....................... 19 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCCGGGGTA....................................................................................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0
......................................................................................TCCGACGATCTGGTAGA....................................................................................................................................................................................................................................................................... 17 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTCGATCGCCTCA..................... 15 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTAGGTCGCCCCA..................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTCGATTGCCCCA..................... 17 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCCGGTTT........................................................................................................................................................................................................................................................................ 18 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0
.....................................................................................GTCCGACGATCTAGTGTGA...................................................................................................................................................................................................................................................................... 19 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................CCGTGGATCGCCCCAG.................... 16 2 20 0.10 2 1 0 1 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGGTT......................................................................................................................................................................................................................................................................... 17 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGTCTCA..................... 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATTGCCCCA..................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................GATTTGCGTTGGGTA................................................................................................................................................................................................................................ 15 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................TCCCGTCCATCGCCCCA..................... 17 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................GTCCGTCGATCGCCCCA..................... 17 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0
.......................................................TATTCAAGAGACAGGCAATT................................................................................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTTGATCGTCCCA..................... 16 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCGGCCC...................... 19 3 17 0.06 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCGTTCGCGCCA..................... 16 2 18 0.06 1 0 0 1 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCTGGTTGA....................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 1 0 0 0 0 0 0 0 0
....................................................................................AGTCCGACGATCGGGAGTA....................................................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TTTCCCGTGGATCGCCCCA..................... 19 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GATTGGCTTAGAAAGGT............................................................................................................................... 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAGCAGCTGTTGAAA.................................................................................................................................................. 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................CCCGTCTATCGTCCCA..................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................GTCCGACGATCTCGGGTA....................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................ACGAGTTGTTATATAAT....................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................GGTATGAGGTATTATAGAA........................................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................ATTCCCGTCGATCGCCCCA..................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................AAGTCCCGTCGATCGC......................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................CAAGTCCCGTCGATCGCC........................ 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TTTACTAGACGACGAGTCAGAGTGGCAAAACGGTTTGCAATTGAGGTCGACATTCATATGTTTGCTGTCCGTTAATGAAACAAATAAGGCTGCTAGACCACATTAAACTACTCAGTCTTTTCAAAAAATAAACGCAACCCATAGCTACTTTGGGTGACTATATTGGTTGAAACAAATTAACCATATGTTGACAATTAACAAAATCTTCGTCGACAACTTTGTCTAACCGAATCTTTCATCGTCCCTTACTCAATAATATATTATTCACGATTACATAAAGCCTTGATTATTAAGTCACGTAGAGAAATAAAAGATCCCATAATGCTACGGGGCAGCTAGCGGGGTTCGGACCTGAAGTAGTTGGAC
************************************************************************..(((........(((((...(((((((((...((((((.........))))))...))).....))))))...)))))..........)))********************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................AAAAACGCAACCCATAG.............................................................................................................................................................................................................................. 17 1 1 1.00 1 1 0 0 0 0
............CGAGTCAGAGTGGCAAAACGGT............................................................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................TCATCGTCCCTTACTCAATAATATATT........................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
......AGACGACGAGTCAGCATGTCAA.................................................................................................................................................................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................TGGTTGAGAAAAATCAACCAT...................................................................................................................................................................................... 21 3 9 0.33 3 0 0 0 3 0
.................................................................................................................................AAACGCAACCCATAGGT............................................................................................................................................................................................................................ 17 1 4 0.25 1 0 0 0 0 1
...........................................................................................................................................................................ACGAATTATCCATATGTTGAA.............................................................................................................................................................................. 21 3 6 0.17 1 0 0 0 1 0
................................................................................................................................................................................................................................................................................................................................AATGTTATGGGGCAGC.............................. 16 2 20 0.15 3 3 0 0 0 0
......................................................................................................................................................................................................................................................................AGGCACGATTACATAA........................................................................................ 16 2 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................................................CCGAAGCTGTCATCGGCCC......................................................................................................................... 19 3 16 0.06 1 0 0 0 0 1
.........................................................................................................................................................................................................AATCTTCCTCGACAA...................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 1
................TCAGAGTGGCAGGACG.............................................................................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 1 0
.............................................................................................................................................................................................................................................................................................................................................................ACCTGCAGTAGATGGAC 17 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:16017247-16017612 + dsi_14146 AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAACGTTAACTCCAGCTGTAAGTATAC----AAACGA----------CAGGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTTTTTTATTTGCGTT---GGGTATCGATG-AAACCCACTGAT-------------------ATAACCA----ACTTTGTTTAATTGGTATA-CAACTGTTAATTGTTTTAGAAGC--------------------AGCTGTTGAAACAGATTGGCTTAGAAAGTAGCAGGGAATGA-----------------GTTATTATATAATAAGT-------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------CTAATG-TA---------TTTCGGAACTAATAATTCAGTGCATC--TCTTTATTTTCTAGGGTATTACGATGCCCCGTCGATCGCCCCAAGCCTGGACTTCATCAACCTG
droSec2 scaffold_7:98028-98384 + AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTTAACTCCAGCTGTAAGTATAC----AAACAA----------CAAGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAACAGTTTTTTATTTGCGTT---GGGTATCGATG-AAAGCCACTGAT-------------------ATAACCA----ACTTTGTTTAATTTGT----------TTAATTGTTTTAGAAGC--------------------AGCTGTTGAAACAGATTGACTTAGAAAGTAGCAGGGAATGA-----------------GTTATTATATAATGAGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TA---------TTTCGGAACTAATGATGCAATGCACC--TCTTCATTTTCTAGGGTACTACGATGCTCCTTCGATTGCCCCAAGCCTGGACTTCATCAACCTG
dm3 chr2L:16451878-16452243 + AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGTAAGTATAC----AAACAA----------CAGGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTTTTTTATTTGCGTT---GTGTATCGATG-AAACCCACTGAT-------------------ACAAGCC----ACTTTGTTTAATTGGTACA-CAACTGTTAATTGTTTTGAAAGC--------------------AGCTGTTGAAACAGATTGTCTTAGAAAGAAGCAGGGAAAGA-----------------GTTATTATATAATGAGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TA---------TTACGGAACTAATAATTCAGTGCACA--ATTCCACTTTCTAGGGTACTATGATGCCCCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTG
droEre2 scaffold_4845:19518581-19518854 + AAACGATCTGCTGCTCAGCCTCACCGTTTTGCCAAATGTGAACTCAAGCTGTAAGTA---------------------------------CT--------------TTGTTTATTCCGACGATCTGCTG--TA-ATTAGATGAGTCAGAAAAGTGTT------------------ATCGATG-GAA-CCGCTGAT-------------------ATAACCA----ACTTTG-TTAATTGAT-------------------------GC--------------------AGCTGTTCAAACAAGTTGGTTTAGAAAGCAGTCGCGAATGA-----------------GTTGTTATAGAACACGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------------GTACCATTTTCCAGGGTACTACGATGCGCCTTCGATCGCTCCAAGCCTGGACTTCATCAACCTG
droYak3 2R:2909013-2909376 + AAATGATCTGCTGCTTAGTCTCACCGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATAC----AAGCAA----------CGGGCAATTAGT--------------TTGTTCATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTGCTTTATTTGCGTT---GGGTATCGATG-GAACCTACTGAT-------------------ATAACCA----ACTTTGTTTAGTTG------------TTAGCTCTCTCAAAAGC--------------------AGCTGTTAAAACACAATGTTTTAGAAAGTGTTAGGGAATGA-----------------GTTATTATATAATGAGTATTG-------------------------------------------------------------TAGACTTTTCATGC-------------------------------------------------------------------------------------------------------------------------------TTTCGGAACAACTGTGTCAGAACAAC--CTTTCATTTTCCAGGGTACTACGATGCCCCTTCGATCGCTCCAAGCCTGGACTTCATCAACCTG
droEug1 scf7180000408961:28579-28948 + AAATGATCTGCTTCTGAGTCTCACTGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATA-----------------------AGCAATTATC--------------TTAATTATTCCGACTAACCGGTG--TA-ATTTGATGAGTCAGAAAAGCATTCAGATTACGTC---------------------AATGAT-------------------AAAACAA----CCTGA-CTTAGTTGATATA-CAGCTGTTTACTC-TTTATAAGC--------------------AACTGTTTTTACATTATATCGTAA--ATTAAAAGCGA-TGCGATTCCTATTTACCTTCATTAATGAATAATAAGAATTATAATTATAAGTCAAGCGCG-------ATGCATA-TTTTTTGTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------AA-------ACTAA----------CAAA---TTTATTCTTATAGGGTACTACGATGCCCCTTCGATCGCTCCCAGCTTGGACTTCATTAATCTG
droBia1 scf7180000301468:577778-577984 + AAACAACCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTTAACTCGAGCTGTAAGTATAA----CAAA-----------------AAATGCA--------------TTACTTATTCCCACTAACCGGTG--TA-ATTTGATGAGTCAGAAAAGCGGTTTATTTGCGTCACTTTATAACGATG-AAAGCCCCTGAT-------------------AAAACAA----ACTTT-TTTAATTGATTCA-GAACTGT----CGTTTTAAGAGC--------------------AGCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415914:115407-115764 + AAACGACCTGCTGCTGAGTCTCACCGTTCTGCCAAATGTTAACTCAAGTTGTAAGTACAG----AAATAA----------TTTACAATTACT--------------CTAATTATGCCGTCTAACTGGT----A-TTTCGATGAGTCAGTAAAGCGTTTTATTTACGTCACCGAGTATCGATG-AAAGCCCCTGAT-------------------AAAACAA----ACTTT-TTTAATTGATTCA-GAACGGATGATTAATTTAAAAAC--------------------AGCTGTA-------------------------------------------------------------------------------------------TCTTGCGCTGTTTA-CTTTTTGTAATAGATACAAAATTACATTGTATTTTGTAAAT---------------------------------------------------------------------TT--------------------------------TTACTTCTAATATTTATTATT-------------------------------TATATTTCTTGTAGGGTACTACGATGCACCTTCGATTGCTCCCAGCTTGGACTTCATTAACCTG
droEle1 scf7180000491214:1810621-1811026 - GGACAACCTGCTGCTCTCCACCACCGTTCTGCCCAATGTGAACTCATCTTGTAAGTGTTACCATTTCACACTATTAACAAAAAGTAGTATATCTAATTATTTCATACTAAATTTGTATACTTTTTCCCTTT-GCTTTTTGAAACGTA----------------------------------------------------------------------------------------GTTCGTATTTTAA---------GATCTCAAAAACTTAATTTAAACAAAACCATG----------------------------------------------------------------------------------------------------------------ATGTTTTCAAATCAGATAAAATGCTTTTAAATCGTACATTTTCCACATTAATTAATTAAATCATGCAGTTTAATAAGCATTGTATATGAAATTTACAATTTTGTATTCAGTGTAGATTTCAGAACTCTTGCGACTTTGATTTGT----------------------AA-------TCTTA----------------TAATTTTCCCCCAGTGTTCTACGACATTCCTGCCGTGATCAACTATCTGGACTTTGTGAACCTG
droRho1 scf7180000760353:302-519 + AAATGATCTGTTGCTGAGTCTCACCGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATAC----AAAAAAAG--------CAAACAATTACT--------------TTAATTACACAGACTAACTGGTG--TA-ATTAGATGAGTCAGAAAAGTGTTTT-TTTGCGTCACCGTGTTTCGATA-AAACCCACTGCT-------------------AACACAA----ACATTGTTTAATTGATGTA-CAACTATTTACTATTTT--AATC--------------------AGCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454078:390623-390976 + AAATGATCTGCTGCTCAGTCTTACGGTTCTGCCCAACGTGAACTCAAGCTGTAAGTGTGC----AAATAA----------TTAACCATTATT--------------CTAATTACAAACTATAACTGGGG--CA-ATTAGATGAGTCAAATAAGCGGTTTACTTGAGTCATC--------------------------------------------AAAAAA----AATTAGATTAACTGGTGTAACAA---------GTTTTTAAAGCATTAATTTTAATTTAACCACAGTTTTTATTACCT-------------------------GAG--TT----CGTTCA---------------------------------CAAA-TGTGTTTA------TA-A-ATGCTTAAAATTAAGTCAAAATGGCAACAAACCTTACACGT-------------------------------------------------------------------------------------------------------------------------------TTTTAAT-------------------ATACATTTTTTTAAAGGGTACTACGATGCTCCCTCGATTGCTCCCAGCCTGGACTTCATCAACCTG
droKik1 scf7180000302382:240197-240487 + GAATGATCTGCTGCTGAGTCTCACGGTGCTGCCCAATGTGAATTCGAGCTGTAAGTTTGA----AAATA-----------------GTTACT--------------TAGCTAATA-----------------A-GTTTGTTGACTCAGAAAAGCAATTAATT-GC---------TAAGG-TAAAACACAACTGAT-------------------ACAACAG----ATCGC-TTTTATTGATTTT-TACCTCGTAACTC-T----------------------------AGAT-----------------------------------GTG--TTCTATCTTCCA---------------------------------CAAAGTCTG-------CTTTAGA-TTCTTTTCTAATT---------------------------------------------------------------------------------------------------------------------------------------------------------TA-------ACTAA----------AAT----CTCTCTATTTTAGGGTACTATGATGCCCCCTCCATTGCACCCAGTCTGGACCTTATCAACCTG
droAna3 scaffold_12916:16100119-16100444 - AAACAACCTGCTTGTCAGTCTCACGGTTCTTCCCAATGTTAACTCAAGCTGTAAGTACAC----TCCACACT--------TAGAAAGTCAGA--------------TTAATTATTTTCACTAATTCGTTTTTG-CTTTTGTGAGTCATAAAAGCGATGATTTTGCAAATA--------TGTT-ATAACAGCTGAC-------------------TTAACAAAGTAAAATCGGTTATATGATACA-CAGATGTACCTAGATCTATATTC--------------------GACTTTTA-----------------------------CATA-----------------CTTATAATGTGATAACT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTATTACCTATTA--------------------------ACCTCTAATCCATTACAGGGTATTACGATGCCCCTTCAATCGCTAACAGCTTGGACTTTATTAACCTG
droBip1 scf7180000396717:339929-340255 - GAACAACTTGCTCGTCAGTCTCACGGTTCTTCCCAATGTGAACTCAAGCTGTAAGTACCC----CCCATAC---------TTGGAAAGTAAG--------------ATAATTATTTGCACTAATTCGTTTT-GCTTTTTGTGAGTCATAAAGTCAATGACTTTGCGAAAA-------------ACAACAGCTGATGTATTATTACAAATGTTTTATAACAA----ACTCG-GTTACTTAATACA-C-------------TTGATACGC--------------------AGGTGTA-------------------------------------------------------------------------------------------TTTCAAGCTATAG---------------------------------------------------------------------------------------------------------AACTTAGTG--------------------------------TTAATTCTAGTATTACCTATTA--------------------------ACTCTCTATTTATTTTAGGGTACTACGATGCCCCTTCGATCGCTCCCAGTTTGGACTTTATTAACCTG
dp5 4_group3:8172455-8172524 + CGATGGCCTGCTGCTCAGCCTGACGGTCCTGCCCAACGTGAACTCCACATGTGAGTAGCA----AA-TGG----------ATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:9624559-9624638 + TTTTAAACGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-CTGTGCCTCTTTCCAGGGTACTACGACGCCCCTGCCATTGAACCCAGCTTGGACTTCATCAACCTG
droWil2 scf2_1100000004585:4648129-4648229 + AG---------TGTTCAGTCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGAAGAACTAAATC-GTATAAT---TCTCTTTTTGTAGGGTATTTTGATATTCCTGCTCTCAATGGGCTGGTTGATTTTGTGAATTTG
droVir3 scaffold_12963:13034790-13034877 - GCATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAAATGCATTA--------------------------GTTCGCAATTTTTCGCAGGGTATTTTGACATACCAGCGCTGAACGGGCTCGTTGACTTTGTCAACTTG
droMoj3 scaffold_6500:7054344-7054418 + CATCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT--------------------------AC---TTTCGATCTACAGGGTATTTCGATGCACCTGTCATCGGCAAAAATGTTGACTTCATCAACCTC
droGri2 scaffold_14978:657665-657720 + AAATGATCTACTGCTCAGTCTCACCGTTCTACCGAATGTGAACTCCACCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAACGTTAACTCCAGCTGTAAGTATAC----AAACGA----------CAGGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTTTTTTATTTGCGTT---GGGTATCGATG-AAACCCACTGAT-------------------ATAACCA----ACTTTGTTTAATTGGTATA-CAACTGTTAATTGTTTTAGAAGC--------------------AGCTGTTGAAACAGATTGGCTTAGAAAGTAGCAGGGAATGA-----------------GTTATTATATAATAAGT-------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------CTAATG-TA---------TTTCGGAACTAATAATTCAGTGCATC--TCTTTATTTTCTAGGGTATTACGATGCCCCGTCGATCGCCCCAAGCCTGGACTTCATCAACCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGCCCCA.....................16119.0019000000000190000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCGATCGCCCCA.....................15112.0012000000000120000000
.....................................................................................................................................................................................................................................................................TAGAAGC--------------------AGCTGTTGAAACA........................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------------------------------------------------------------------------------------CTAATG-TA---------TTTCGGAACTAATAATTC..........................................................................2711.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGTCGATCGCCCC......................1511.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCCCAAGCCTGGACTTC.........2111.00100100000000000000
................................CAAACGTTAACTCCAGCTGGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.............................TGCCAAACGTTAACTCCAGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...................................................................................................................................................................................................................................................................................................TGTTGAAACAGATTGGCT................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCGTCGATCGCCCC......................1711.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCCCGTCGATCGCCCCA.....................2111.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGATCGCCCCAT....................1550.20100000000010000000
.............................................................................................................................................................................................................................................................................................................GATTGGCTTAGAAAGGT.......................................................................................................................................................................................................................................................................................................................................................17200.05100000000100000000
droSec2
AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTTAACTCCAGCTGTAAGTATAC----AAACAA----------CAAGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAACAGTTTTTTATTTGCGTT---GGGTATCGATG-AAAGCCACTGAT-------------------ATAACCA----ACTTTGTTTAATTTGT----------TTAATTGTTTTAGAAGC--------------------AGCTGTTGAAACAGATTGACTTAGAAAGTAGCAGGGAATGA-----------------GTTATTATATAATGAGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TA---------TTTCGGAACTAATGATGCAATGCACC--TCTTCATTTTCTAGGGTACTACGATGCTCCTTCGATTGCCCCAAGCCTGGACTTCATCAACCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTCCTTCGATTGCCCC......................2011.0010010
dm3
AAATGATCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTGAACTCCAGCTGTAAGTATAC----AAACAA----------CAGGCAATTACT--------------TTGTTTATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTTTTTTATTTGCGTT---GTGTATCGATG-AAACCCACTGAT-------------------ACAAGCC----ACTTTGTTTAATTGGTACA-CAACTGTTAATTGTTTTGAAAGC--------------------AGCTGTTGAAACAGATTGTCTTAGAAAGAAGCAGGGAAAGA-----------------GTTATTATATAATGAGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TA---------TTACGGAACTAATAATTCAGTGCACA--ATTCCACTTTCTAGGGTACTATGATGCCCCGTCGATCGCCCCAAGCCTGGACTTTATCAACCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
AAATGATCTGCTGCTCAGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCCCGTCGATCGCCCC......................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AATGATCTGCTGCTCAGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTATGATGCCCCGTCGATCGCC........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGAAAGAAGCAGGGAAG..............................................................................................................................................................................................................................................................................................................................................1721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAATGATCTGCTGCTCAGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTGCTGCTCAGTCTCACCGTTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGATGCCCCGTCGATCGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTATGATGCCCCGTCG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGACTTTATCAACCTG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTGCCAAATGTGAACTCCAGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTATGATGCCCCGTCGATCGCCC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GCTGTTGAAACAGATTGTTCC...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.AATGATCTGCTGCTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGATCGCCCCAAGCCTGG..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......CTGCTGCTCAGTCTCACCGTTTTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGATGCCCCGTCGATCGCCC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
AAATGATCTGCTGCTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................TA-ATTTGATGAGTCAGAAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.AATGATCTGCTGCTCAGTCTCACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................G--TA-ATTTGATGAGTCAGAAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................TCACCGTTTTGCCAAATGTGAACTCCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAATGATCTGCTGCTCAGTCTCACCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........GCTGCTCAGTCTCACCGTTTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CGATG-AAACCCACTGAT-------------------ACAAGCC----A...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCTCAGTCTCACCGTTTTGCCAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................C--------------------AGCTGTTGAAACAGATTGTC.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTCTAGGGTACTATGATGC.....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCCCCAAGCCTGGACTT..........2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AGAAAGAAGCAGGGAAGT.............................................................................................................................................................................................................................................................................................................................................18160.5690000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
.........................................................................................................................................................................................................................................................................................................................AAGAAGCAGGGAAAGA-----------------GTCG.......................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
droEre2
AAACGATCTGCTGCTCAGCCTCACCGTTTTGCCAAATGTGAACTCAAGCTGTAAGTA---------------------------------CT--------------TTGTTTATTCCGACGATCTGCTG--TA-ATTAGATGAGTCAGAAAAGTGTT------------------ATCGATG-GAA-CCGCTGAT-------------------ATAACCA----ACTTTG-TTAATTGAT-------------------------GC--------------------AGCTGTTCAAACAAGTTGGTTTAGAAAGCAGTCGCGAATGA-----------------GTTGTTATAGAACACGT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------------GTACCATTTTCCAGGGTACTACGATGCGCCTTCGATCGCTCCAAGCCTGGACTTCATCAACCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGATCGCTCCAAGCCTGGACTTC.........25114.001400000014
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTCGATCGCTCCAAGCCTGGAC............2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTACGATGCGCCTTCGAT............................2111.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACTACGATGCGCCTTCG..............................2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTCCAAGCCTGGACTTC.........2111.0010100000
AAACGATCTGCTGCTCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
AAATGATCTGCTGCTTAGTCTCACCGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATAC----AAGCAA----------CGGGCAATTAGT--------------TTGTTCATTCCGACGATCTGGTG--TA-ATTTGATGAGTCAGAAAAGTGCTTTATTTGCGTT---GGGTATCGATG-GAACCTACTGAT-------------------ATAACCA----ACTTTGTTTAGTTG------------TTAGCTCTCTCAAAAGC--------------------AGCTGTTAAAACACAATGTTTTAGAAAGTGTTAGGGAATGA-----------------GTTATTATATAATGAGTATTG-------------------------------------------------------------TAGACTTTTCATGC-------------------------------------------------------------------------------------------------------------------------------TTTCGGAACAACTGTGTCAGAACAAC--CTTTCATTTTCCAGGGTACTACGATGCCCCTTCGATCGCTCCAAGCCTGGACTTCATCAACCTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................CCAAATGTTAACTCAAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.AATGATCTGCTGCTTAGTCTCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
AAATGATCTGCTGCTTAGTCTCACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...TGATCTGCTGCTTAGTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.......CTGCTGCTTAGTCTCACCGTTTTGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
.........................GTTTTGCCAAATGTTAACTCAAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
......TCTGCTGCTTAGTCTCACCGTTTTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000000000
................................CAAATGTTAACTCAAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
AAATGATCTGCTGCTTAGTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.............CTTAGTCTCACCGTTTTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.AATGATCTGCTGCTTAGTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACGATGCCCCTTCGATCGC.........................2211.00110000000000
...............................................................................................................CATTCCGACGATCTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17150.20300000000210
................................................................................................................ATTCCGACGATCTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1580.13100000000010
droEug1
AAATGATCTGCTTCTGAGTCTCACTGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATA-----------------------AGCAATTATC--------------TTAATTATTCCGACTAACCGGTG--TA-ATTTGATGAGTCAGAAAAGCATTCAGATTACGTC---------------------AATGAT-------------------AAAACAA----CCTGA-CTTAGTTGATATA-CAGCTGTTTACTC-TTTATAAGC--------------------AACTGTTTTTACATTATATCGTAA--ATTAAAAGCGA-TGCGATTCCTATTTACCTTCATTAATGAATAATAAGAATTATAATTATAAGTCAAGCGCG-------ATGCATA-TTTTTTGTTATAT---------------------------------------------------------------------------------------------------------------------------------------------------------AA-------ACTAA----------CAAA---TTTATTCTTATAGGGTACTACGATGCCCCTTCGATCGCTCCCAGCTTGGACTTCATTAATCTGSizeHit CountTotal NormTotal
No Reads
droBia1
AAACAACCTGCTGCTCAGTCTCACCGTTTTGCCAAATGTTAACTCGAGCTGTAAGTATAA----CAAA-----------------AAATGCA--------------TTACTTATTCCCACTAACCGGTG--TA-ATTTGATGAGTCAGAAAAGCGGTTTATTTGCGTCACTTTATAACGATG-AAAGCCCCTGAT-------------------AAAACAA----ACTTT-TTTAATTGATTCA-GAACTGT----CGTTTTAAGAGC--------------------AGCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAACGACCTGCTGCTGAGTCTCACCGTTCTGCCAAATGTTAACTCAAGTTGTAAGTACAG----AAATAA----------TTTACAATTACT--------------CTAATTATGCCGTCTAACTGGT----A-TTTCGATGAGTCAGTAAAGCGTTTTATTTACGTCACCGAGTATCGATG-AAAGCCCCTGAT-------------------AAAACAA----ACTTT-TTTAATTGATTCA-GAACGGATGATTAATTTAAAAAC--------------------AGCTGTA-------------------------------------------------------------------------------------------TCTTGCGCTGTTTA-CTTTTTGTAATAGATACAAAATTACATTGTATTTTGTAAAT---------------------------------------------------------------------TT--------------------------------TTACTTCTAATATTTATTATT-------------------------------TATATTTCTTGTAGGGTACTACGATGCACCTTCGATTGCTCCCAGCTTGGACTTCATTAACCTGSizeHit CountTotal NormTotal
No Reads
droEle1
GGACAACCTGCTGCTCTCCACCACCGTTCTGCCCAATGTGAACTCATCTTGTAAGTGTTACCATTTCACACTATTAACAAAAAGTAGTATATCTAATTATTTCATACTAAATTTGTATACTTTTTCCCTTT-GCTTTTTGAAACGTA----------------------------------------------------------------------------------------GTTCGTATTTTAA---------GATCTCAAAAACTTAATTTAAACAAAACCATG----------------------------------------------------------------------------------------------------------------ATGTTTTCAAATCAGATAAAATGCTTTTAAATCGTACATTTTCCACATTAATTAATTAAATCATGCAGTTTAATAAGCATTGTATATGAAATTTACAATTTTGTATTCAGTGTAGATTTCAGAACTCTTGCGACTTTGATTTGT----------------------AA-------TCTTA----------------TAATTTTCCCCCAGTGTTCTACGACATTCCTGCCGTGATCAACTATCTGGACTTTGTGAACCTGSizeHit CountTotal NormTotal
No Reads
droRho1
AAATGATCTGTTGCTGAGTCTCACCGTTTTGCCAAATGTTAACTCAAGCTGTAAGTATAC----AAAAAAAG--------CAAACAATTACT--------------TTAATTACACAGACTAACTGGTG--TA-ATTAGATGAGTCAGAAAAGTGTTTT-TTTGCGTCACCGTGTTTCGATA-AAACCCACTGCT-------------------AACACAA----ACATTGTTTAATTGATGTA-CAACTATTTACTATTTT--AATC--------------------AGCTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAATGATCTGCTGCTCAGTCTTACGGTTCTGCCCAACGTGAACTCAAGCTGTAAGTGTGC----AAATAA----------TTAACCATTATT--------------CTAATTACAAACTATAACTGGGG--CA-ATTAGATGAGTCAAATAAGCGGTTTACTTGAGTCATC--------------------------------------------AAAAAA----AATTAGATTAACTGGTGTAACAA---------GTTTTTAAAGCATTAATTTTAATTTAACCACAGTTTTTATTACCT-------------------------GAG--TT----CGTTCA---------------------------------CAAA-TGTGTTTA------TA-A-ATGCTTAAAATTAAGTCAAAATGGCAACAAACCTTACACGT-------------------------------------------------------------------------------------------------------------------------------TTTTAAT-------------------ATACATTTTTTTAAAGGGTACTACGATGCTCCCTCGATTGCTCCCAGCCTGGACTTCATCAACCTGSizeHit CountTotal NormTotal
No Reads
droKik1
GAATGATCTGCTGCTGAGTCTCACGGTGCTGCCCAATGTGAATTCGAGCTGTAAGTTTGA----AAATA-----------------GTTACT--------------TAGCTAATA-----------------A-GTTTGTTGACTCAGAAAAGCAATTAATT-GC---------TAAGG-TAAAACACAACTGAT-------------------ACAACAG----ATCGC-TTTTATTGATTTT-TACCTCGTAACTC-T----------------------------AGAT-----------------------------------GTG--TTCTATCTTCCA---------------------------------CAAAGTCTG-------CTTTAGA-TTCTTTTCTAATT---------------------------------------------------------------------------------------------------------------------------------------------------------TA-------ACTAA----------AAT----CTCTCTATTTTAGGGTACTATGATGCCCCCTCCATTGCACCCAGTCTGGACCTTATCAACCTGSizeHit CountTotal NormTotal
No Reads
droAna3
AAACAACCTGCTTGTCAGTCTCACGGTTCTTCCCAATGTTAACTCAAGCTGTAAGTACAC----TCCACACT--------TAGAAAGTCAGA--------------TTAATTATTTTCACTAATTCGTTTTTG-CTTTTGTGAGTCATAAAAGCGATGATTTTGCAAATA--------TGTT-ATAACAGCTGAC-------------------TTAACAAAGTAAAATCGGTTATATGATACA-CAGATGTACCTAGATCTATATTC--------------------GACTTTTA-----------------------------CATA-----------------CTTATAATGTGATAACT-------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTATTACCTATTA--------------------------ACCTCTAATCCATTACAGGGTATTACGATGCCCCTTCAATCGCTAACAGCTTGGACTTTATTAACCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTTCAATCGCTAACAGC..................2011.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCCCTTCAATCGCTAACA....................2211.001100000
.......CTGCTTGTCAGTCTCACGGTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
GAACAACTTGCTCGTCAGTCTCACGGTTCTTCCCAATGTGAACTCAAGCTGTAAGTACCC----CCCATAC---------TTGGAAAGTAAG--------------ATAATTATTTGCACTAATTCGTTTT-GCTTTTTGTGAGTCATAAAGTCAATGACTTTGCGAAAA-------------ACAACAGCTGATGTATTATTACAAATGTTTTATAACAA----ACTCG-GTTACTTAATACA-C-------------TTGATACGC--------------------AGGTGTA-------------------------------------------------------------------------------------------TTTCAAGCTATAG---------------------------------------------------------------------------------------------------------AACTTAGTG--------------------------------TTAATTCTAGTATTACCTATTA--------------------------ACTCTCTATTTATTTTAGGGTACTACGATGCCCCTTCGATCGCTCCCAGTTTGGACTTTATTAACCTGSizeHit CountTotal NormTotal
No Reads
dp5
CGATGGCCTGCTGCTCAGCCTGACGGTCCTGCCCAACGTGAACTCCACATGTGAGTAGCA----AA-TGG----------ATGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................CTGACGGTCCTGCCCAACGTGAACTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
....GGCCTGCTGCTCAGCCTGACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..............TCAGCCTGACGGTCCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010100000000
droPer2
TTTTAAACGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT-CTGTGCCTCTTTCCAGGGTACTACGACGCCCCTGCCATTGAACCCAGCTTGGACTTCATCAACCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAACCCAGCTTGGAC............1811.001100000
droWil2
AG---------TGTTCAGTCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGAAGAACTAAATC-GTATAAT---TCTCTTTTTGTAGGGTATTTTGATATTCCTGCTCTCAATGGGCTGGTTGATTTTGTGAATTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATATTCCTGCTCTCAATGG......................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAGAAGAACTAAATC-GTA......................................................................2011.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATTCCTGCTCTCAAT........................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCCTGCTCTCAATGGGCTGGTT...............2711.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCTGGTTGATTTTGTGAATTTG2611.00100010
droVir3
GCATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAAAATGCATTA--------------------------GTTCGCAATTTTTCGCAGGGTATTTTGACATACCAGCGCTGAACGGGCTCGTTGACTTTGTCAACTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCTGAACGGGCTCGTT...............2012.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCAGCGCTGAACGGGCTCGTT...............2511.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGACATACCAGCGCTGAACG.......................2411.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCAGCGCTGAACGGGCTCGTT...............2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGACATACCAGCGCTGAAC........................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACCAGCGCTGAACGGGCTCG.................2311.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGGGCTCGTTGACTTTGTC......2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACCAGCGCTGAACGGGCTCG.................2411.001000000000000000000000100000000000000000000000000000000000000000
droMoj3
CATCTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT--------------------------AC---TTTCGATCTACAGGGTATTTCGATGCACCTGTCATCGGCAAAAATGTTGACTTCATCAACCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AAATGATCTACTGCTCAGTCTCACCGTTCTACCGAATGTGAACTCCACCTGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........ACTGCTCAGTCTCACCGTTCTACCGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
AAATGATCTACTGCTCAGTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.........ACTGCTCAGTCTCACCGTTCTACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..........CTGCTCAGTCTCACCGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..................TCTCACCGTTCTACCGAATGTGAACTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
............GCTCAGTCTCACCGTTCTACCGAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110
.........ACTGCTCAGTCTCACCGTTCTACCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110

Generated: 05/18/2015 at 11:43 PM