ID:

dsi_14139

 Coordinate:

3l:9193469-9193618 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.1 -14.6 -14.5

Flybase annnotation

CDS [3l_9193619_9193621_-]; intron [3l_9193652_9193715_-]; five_prime_UTR [3l_9193622_9193651_-]; exon [3l_9193619_9193651_-]; intron [3l_9193285_9193618_-]

No Repeatable elements found

Sense Strand Reads

-----------------#################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTATTTCTCATTTTAGCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTAGCAACGAAAAACTGGCTGAACTCGAATCAAAAAGCGGTCAAACAAGCATAAAACGGCAACGACAGCCGCTTGTCCCACGTGCATAGTGCCAATTTTGTTACCCCAAAAGCAATCATTTGTATCCGGCGTCTTAAAACCGTCCTTAATATCAATACCAAAAAGCAACTCAAACGGAAACTTTAGAAGAAACCTA
*******************************************************************..((((......((.......(((((((.......((........)).......)))))))......))........))))****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343915
embryo
 M025
embryo
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
.......................TTAAAATATCCATCGAGC................................................................................................................................................................................................................. 18 0 1 4.00 4 0 2 0 2 0 0 0 0 0 0 0 0
.......................TTAAAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................... 25 0 1 3.00 3 0 0 0 0 1 2 0 0 0 0 0 0
.....................GATTAAAATATCCATCGAGC................................................................................................................................................................................................................. 20 0 1 3.00 3 1 0 1 0 0 0 0 1 0 0 0 0
....TTTCTCATTTTAGCGGTGATTAAAA............................................................................................................................................................................................................................. 25 0 1 2.00 2 0 0 0 0 0 0 1 0 0 0 1 0
..................................ATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 19 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..............GAGCGGTGATTAAAATATCC........................................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................TGATTAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
........................TAAAATATCCATCGAGCAACATAATGGG...................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................ATCGAGCAACATAATGGGTCGC.................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................CATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................GATTAAAATATCCATCGAGG................................................................................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................TAAAATATCCATCGAGCAAC.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................TAAAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................ATCCATCGAGCAACATAATGG....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.................................CATCGAGCAACATAATGGGTC.................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................TATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................GATTAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................TAAAATATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 29 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................GCGGTGATTAAAATATCCATCGAG.................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................TAATGGTAAGTAGAAACAAAAAACT.................................................................................................................................................................................... 25 3 2 1.00 2 0 0 0 0 0 0 0 0 0 0 0 2
....................TGATTAAAATATCCATCGAGCAACAT............................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................ATATCCATCGAGCAACATAATG........................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............CGAGCGGTGATTAAAATATCCATCGA................................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................TAAAATATCCATCGAGCA................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................ACTGGCTGAACTCGAATCAAAAAGC.............................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CAAACGGAAACTTTAGAAGAAAC... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............CGAGCGGTGATTAAAATATC......................................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................CTTGTCCCACGTGCATAGTGCCA...................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................AATATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................TTAAAATATCCATCGAGCAAC.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................GTGATTAAAATATCCATCGAGCAACA............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................ATCGAGCAACATAATGGGTC.................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
......................ATTAAAATATCCATCGAGCAAC.............................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
....................TGATTAAAATATCCATCGAGCAACA............................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................AAAACTGGCTGAACTCGA........................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.................................CATCGAGCAACATAATGGGTCG................................................................................................................................................................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAAAAGCAACTCAAACGGAAACTT............. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................ATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................CAAGACAATGATACGTAGC............................................................................................................................................................................................... 19 3 11 0.91 10 0 0 2 7 0 0 0 0 1 0 0 0
....................................CGAGCAACATAATGGGTCGC.................................................................................................................................................................................................. 20 3 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AATACCAAAAAGAAGCTCAAACC.................... 23 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
............TTTAGCGGTCATTAAA.............................................................................................................................................................................................................................. 16 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0
................................................................AAAACTGGCAGACCTCGAA....................................................................................................................................................................... 19 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0 0 0
.....................................GAGCAACATAATGGGTCGG.................................................................................................................................................................................................. 19 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................ATCCATCGGGCAACA............................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GAATAAAGAGTAAAATCGCCACTAATTTTATAGGTAGCTCGTTGTATTACCATGCATCGTTGCTTTTTGACCGACTTGAGCTTAGTTTTTCGCCAGTTTGTTCGTATTTTGCCGTTGCTGTCGGCGAACAGGGTGCACGTATCACGGTTAAAACAATGGGGTTTTCGTTAGTAAACATAGGCCGCAGAATTTTGGCAGGAATTATAGTTATGGTTTTTCGTTGAGTTTGCCTTTGAAATCTTCTTTGGAT
******************************************************************************************************..((((......((.......(((((((.......((........)).......)))))))......))........))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 M024
male body		 M025
embryo
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
.......................................................................................................................GTCGGCGAACAGGGTGCGCGT.............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................AATTTTATAGGTAGCTCGTT............................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTTTGGCAGGAATTCCAGGTA........................................ 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AACATAGGCCGCAGAATTTTG........................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................CGGCGAACAGGGTGCACGT.............................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTTTGGCAGGAATTATAGTTA........................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGGTTCTTCGTTGAGTCTGCGT.................. 22 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................TGTCGGCGGACAGGGTGCACGT.............................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TTGGCAGGAATTATAGTTATG...................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TTTCGGCGAACAGGGTGCACGT.............................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................GTCGGCGAACAGGGTGCACGT.............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TTTTGGCAGAAATGTTAGTTAT....................................... 22 3 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................TCAGGGTGTACGTAACACGG....................................................................................................... 20 3 5 0.40 2 0 0 0 0 0 2 0 0 0 0 0
.........................................................................................................ATTTTGCCGGTGCTGACG............................................................................................................................... 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................ATGGTTTTTCTTCGAGTTT...................... 19 2 12 0.25 3 0 0 0 0 3 0 0 0 0 0 0
...................................................................................................................................................................................................................GGTTTTTCGTTGAGGTT...................... 17 1 4 0.25 1 0 0 0 0 0 0 0 1 0 0 0
.........................TTGTATAGGTAGCGCGTT............................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CAATGGGGATGTCGTGAGT.............................................................................. 19 3 13 0.15 2 0 0 0 0 0 2 0 0 0 0 0
............................................................................................................................................ATCAGGGTTAAAACATTG............................................................................................ 18 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................AGACTTTTGGCAGGA.................................................. 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................TTTGGCAGGAATTCCAGGTA........................................ 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TGGTTGTTCGATTAGTTTGC.................... 20 3 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGCAATTATAGTTATGT..................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................TTCTTTGAGTTTGCC................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................TCGCGAGTTTGTTCATAAT.............................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
............................................................................................ACAGTTTGTTCGTAT............................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:9193419-9193668 - dsi_14139 CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTAGCAACGAAAAACTGGCTGAACTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATCATTTGTATCCGGCGTCTTAAAACCGTCCTTAATATCAA-TACCAAAAAGCA-------------ACTCAAACGGAAACTT---TAG------AAGAAA-----------CCTA--
droSec2 scaffold_0:1667578-1667827 - CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTAGCAACGAAAAACTGGCTGAAGTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATTATTTGTATCCGGCGTCTTAAAACCGTCCTAAATATCAA-TACCAAAAACCT-------------ATTCAAACGGAAACTT---TAG------AAGAAA-----------CCTA--
dm3 chr3L:9422595-9422844 - CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTACCAACGAAAAACTGGCTGAACTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TATCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATTATTTGTATCCGGCGTCTTGAAACCGTCCTTAATATCAA-TACCAAATAGCA-------------ATTCAAACGGAAACTT---TAA------AAGAAA-----------CCTA--
droEre2 scaffold_4784:9418413-9418661 - der_769 CAAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCGACGAAAAACTGGCCGAAATCGAAACAGAAAACGGTCAAACAACCAA-AAAACGGCAA-CGACAGCAGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAA-----AGCTATTATTTGTGTCCGGCGTCTTAAAACCGACTTTAATGTTCA-TTACAAAAAGCA-------------GTTCGAACAGTAACTT---AAA------AAGAAT-----------CTTA--
droYak3 3L:2497578-2497827 + CAAATTTCTTATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCACCGAAAAACTGGCTAAAATCGAATCAGAAAACGGTCTAACAACCAT-AAAACGGCAA-CGACAGCAGCT-GGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCCGA----ATCCATTATTTGTGTCCGGCGTCTTAAAACCGACTTTTATATTCA-TTACAAAAATCA-------------GTTCATACCGTAACTT---TAA------AAGCAT-----------CTTA--
droEug1 scf7180000409824:112067-112332 + TTAATTTTTCATTTTA-------------------GCGGCGATAAAAATATCCATCAAGCAACAGAATGGTACGTACCAACAAAAAACAGTGTCCAATCAAAATAGGAAACCGGAAAATAACCAG-AAAATG-CAA-CGAAACCGGCCGTTACCCACGTGCATATTG-ATA-TTAGCTA--CCCCTAA----AACAATTATTTATGTGTAG--------CTGTGGCTTTACAATGCC-GTTCTGTTCAAAATGAGAATAAAAAATTCAAAGTGAAAGTT---AAGTC----AAGAAATTCTCAAATTTCCTA--
droBia1 scf7180000300910:1787517-1787761 + TTAATTTCTCATTTTA-------------------GCGGTGAATAAAATATCCATCCAGCAACAGAATGGTACGTAGCAACTAAAAACCGGCGGAAATCAAGACCGAAACCGCACAAAGAACCAA-AAAATGTCGG-CTATAACCGCAGCTTCCCACGTGCATAG-GCGAATTTTGCTA--CCCCAAAA---AACAATTATTTATGTCCCGCGTCTTAGAGGTGCCTTTATTGCAAC-ATGCTGGAAGCA-------------GTGCAATCGAAAGATT---CT---T--------------------TGTA--
droTak1 scf7180000415664:207087-207338 + ATAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCAACGAAATGCCGGATAAAATCGGAACCGAA-ACGGATAAAAAACCCA-AAAATGTCGG-CGTCAGAAGCTGCTACCCACGTGCATAGT-CAAATATCGCTA--CCCCAAAA---AAGCATTATTTATGTGCCGCGTCTTAGCTGTGGGTCTAATAAACCCGATCGGAATGCA-------------ATGTAAACGAATACTT---AT---TCGTAAAC-------------AACA--
droEle1 scf7180000491193:3678651-3678891 - ATAATTTCTCATTTTA-------------------GCGGTGATTAAAATAACCATCAAGCAACATAATGGTAGGTTTCGACAAGACATCGGGAAAAAATATTTTGGAGTACCGGGAACTAACCAA-AA-ACATCAA-CTGCGGCAGCAGCAGCCCACGTGCATTAAATAAAAATTACTA--CCCTAAA----AACAATAATTTGTGTGCGGTGACTGT-CTGTGACTTCTGTTTTCC-CATCGGAACGCA-------------GC------AATAA-TT----AA------GAAAAA-----------TCGT--
droRho1 scf7180000777440:3552-3812 + ATAATTTCTCATTTTA-------------------GCGGTGATTAAAGTAACCATCAAGAAACATAATGGTAGGTTTCGACAGAATATCGGATACAATTAATATACCGAACCGGGAAATAACCAA-AA-ACATCAG-CCGCGGAAGCAGCAGCCCACGTGCATAATG-AAATATTGCTA--CCCCAAA----AACAATAATTTGTGCGCGGAGTCTTGCTGTGACATTTGGTATTCC-CTGCGGAACGCAGT--ATATCAAA-AATTAAGAAAATGCTT---TGC------AAACAA-----------CTTACA
droFic1 scf7180000453807:570257-570510 - TTAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCAAGCAACAGAATGGTGGGTTCTAACAAAAAACCGGCTGTAATTTAAGTGATGAACCGGCAAATAACCAA-AAAAAGACGGCCAACGGCAAAAGAAGCCCACGTGCATAGTA-AAATTTGTCCA--CCCCAAA----AACAACAATTTATGTGCGGCGTCTAACCTGTGACTCCATTATTCC-GCTCGATATTAG-------------ATGCTAGCAAAAACTGGCATAA------GTGCAA-----------CATA--
droKik1 scf7180000302486:1966187-1966406 - CCAATTTCTCATTTTA-------------------GCGGTG-TAAACATATTCATCAAGCTACAGAATGGTGGGTGCCAATGAAAAA-TGCTTAAAATTCTATCCGAAAATGGGAAAATAACCTGAAAAACGACAG-CGAAAAGGGCG-CACTCCACGTGCAAAGAG-ATA--TTGTGACGCCCGAAAAAAAAAAAATAATTTATGTGTGACAACCTC-AGCTGTGTTTCATATAAA-AACCATCA----------------------------------------------------------------AG--
droAna3 scaffold_13117:3242439-3242483 + TTTGTTTCTTGTTTTA-------------------G-GTTGAT--AAATATCCATT------CAAAATGGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000392216:32978-33026 + TTTATTCCTCTTGTTCCATTTTAGAAATATCGCAAGCGGTGATCAAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTAGCAACGAAAAACTGGCTGAACTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATCATTTGTATCCGGCGTCTTAAAACCGTCCTTAATATCAA-TACCAAAAAGCA-------------ACTCAAACGGAAACTT---TAG------AAGAAA-----------CCTA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................TTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1814.00402200000000000000
..........................................TTAAAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................................................................2513.00300000000001020000
........................................GATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................2013.00300010010000100000
....TTTCTCATTTTA-------------------GCGGTGATTAAAA..........................................................................................................................................................................................................................................................................2512.00200000001010000000
.....................................................ATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................1912.00200000000000200000
.......................................TGATTAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................................................................2711.00100000000000010000
...........................................TAAAATATCCATCGAGCAACATAATGGG...................................................................................................................................................................................................................................................2811.00100000000001000000
....................................................CATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2011.00100000000000100000
........................................GATTAAAATATCCATCGAGG..............................................................................................................................................................................................................................................................2011.00100100000000000000
...........................................TAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2011.00100000000000100000
...........................................TAAAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................................................................2411.00100010000000000000
.................................................ATCCATCGAGCAACATAATGG....................................................................................................................................................................................................................................................2111.00101000000000000000
................................................TATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2411.00100000000000100000
........................................GATTAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................................................................2611.00100010000000000000
...........................................TAAAATATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2911.00100010000000000000
...................................GCGGTGATTAAAATATCCATCGAG...............................................................................................................................................................................................................................................................2411.00100000000001000000
.......................................TGATTAAAATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................2611.00100000000000010000
...............................................ATATCCATCGAGCAACATAATG.....................................................................................................................................................................................................................................................2211.00100100000000000000
...........................................TAAAATATCCATCGAGCA.............................................................................................................................................................................................................................................................1811.00100001000000000000
......................................................................................ACTGGCTGAACTCGAATCAAAAAGC...........................................................................................................................................................................................................2511.00101000000000000000
..........................................................................................................................................................................................................................................................................CAAACGGAAACTT---TAG------AAGAAA-----------C.....2311.00100100000000000000
..................................................................................................................................................CT-TGTCCCACGTGCATAGTGCCA................................................................................................................................................2311.00100000000000100000
..............................................AATATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2611.00100000000010000000
..........................................TTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2111.00100100000000000000
......................................GTGATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2611.00100000000010000000
.........................................ATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2211.00101000000000000000
.......................................TGATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................AAAACTGGCTGAACTCGA.....................................................................................................................................................................................................................1811.00110000000000000000
..................................................................................................................................................................................................................................................AAAAAGCA-------------ACTCAAACGGAAACTT---................................2411.00100000000001000000
.................................................ATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2311.00100010000000000000
droSec2
CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTAGCAACGAAAAACTGGCTGAAGTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATTATTTGTATCCGGCGTCTTAAAACCGTCCTAAATATCAA-TACCAAAAACCT-------------ATTCAAACGGAAACTT---TAG------AAGAAA-----------CCTA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................TTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1816.0060060
........................................GATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................2015.0050050
.....................................................ATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................1915.0050032
..............................................AATATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2613.0030030
.........................................ATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1913.0030030
........................................GATTAAAATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................2513.0030030
....................................................CATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2013.0030030
.................................................ATCCATCGAGCAACATAATGG....................................................................................................................................................................................................................................................2112.0020020
.........................................ATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2212.0020020
.................................................ATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2312.0020020
........................................GATTAAAATATCCATCGAGCA.............................................................................................................................................................................................................................................................2112.0020110
...................................................CCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2112.0020020
..................................................TCCATCGAGCAACATAATG.....................................................................................................................................................................................................................................................1911.0010010
.........................................ATTAAAATATCCATCGAGCA.............................................................................................................................................................................................................................................................2011.0010100
..........................................................................................................................CAT-AAAACGGCAA-CGACAG...........................................................................................................................................................................1911.0011000
...........................................TAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2011.0010010
.........................................ATTAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................................................................2511.0011000
................................................TATCCATCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................2411.0010100
...............A-------------------GCGGTGATTAAAATATCCATC..................................................................................................................................................................................................................................................................2211.0010010
..............................................AATATCCATCGAGCAACATAATG.....................................................................................................................................................................................................................................................2311.0010010
........................................GATTAAAATATCCATCGAGCAA............................................................................................................................................................................................................................................................2211.0010010
..........................................TTAAAATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................2311.0010010
.........................................ATTAAAATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................2411.0010010
............................................AAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................1911.0010010
...........................................TAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................................................................2311.0010010
...............................................ATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................1811.0010010
.............................................AAATATCCATCGAGCAACAT.........................................................................................................................................................................................................................................................2011.0010010
.....................................................................GTACGTAGCAACGAAAAACTG................................................................................................................................................................................................................................2111.0011000
......................................................TCGAGCAACATAATGGGT..................................................................................................................................................................................................................................................1840.2510010
dm3
CTTATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACATAATGGTACGTACCAACGAAAAACTGGCTGAACTCGAATCAAAAAGCGGTCAAACAAGCAT-AAAACGGCAA-CGACAGCCGCT-TATCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAAA----AGCAATTATTTGTATCCGGCGTCTTGAAACCGTCCTTAATATCAA-TACCAAATAGCA-------------ATTCAAACGGAAACTT---TAA------AAGAAA-----------CCTA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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........TCATTTTA-------------------GCGGTGATTAAAATATC......................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GATTAAAATATCCATCGA................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TA-------------------GCGGTGATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TCGAGCAACATAATGGTACGT...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................ATCGAGCAACATAATGG....................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TTTGTATCCGGCGTCTTG................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................ATTAAAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AT-AAAACGGCAA-CGACAGCCG........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAATATCCATCGAGCAACATAA.......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............TA-------------------GCGGTGATTAAAATATCCATCGAG...............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACGTACCAACGAAAAACTGG...............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GTGATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................CATAGTGCCAATTTTGTTA--CCCCAAA----AGC.......................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ATTTGTATCCGGCGTCTTGAAA.............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CATCGAGCAACATAATGTG...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AATATCCATCGAGCAACATG........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................CCACGTGCATAGTGCCAATTT............................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AA----AGCAATTATTTGTATCCGG.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TAAAATATCCATCGAGCAACATA........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GATTAAAATATCCATCGAGA..............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............A-------------------GCGGTGATTAAAATATCCATCGA................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TCCCACGTGCATAGTGCCAATTTTGT.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTA-------------------GCGGTGATTAAAATA........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.................................................ATCCATCGAGCAACATAA.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................CGGTGATTAAAATATCCATCG.................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCGACGAAAAACTGGCCGAAATCGAAACAGAAAACGGTCAAACAACCAA-AAAACGGCAA-CGACAGCAGCT-TGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCAA-----AGCTATTATTTGTGTCCGGCGTCTTAAAACCGACTTTAATGTTCA-TTACAAAAAGCA-------------GTTCGAACAGTAACTT---AAA------AAGAAT-----------CTTA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................GATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................20114.00142402330
.........................................ATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2316.0060000510
........................................GATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2414.0040000400
....................................................CATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2014.0040001210
..........................................TTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2113.0030201000
........................................GATTAAAATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2612.0021001000
.....................................................ATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................1922.0040002110
.................................................ATCCATCGAGCAACAGAATG.....................................................................................................................................................................................................................................................2012.0020000200
........................................GATTAAAATATCCATCGAGCAACAGAAT......................................................................................................................................................................................................................................................2812.0020000200
.........................................ATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1912.0020000110
.................................................ATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2312.0020010010
............TTTA-------------------GCGGTGATTAAAATATCCATC..................................................................................................................................................................................................................................................................2511.0011000000
..............................................AATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2011.0010000100
..........................................TTAAAATATCCATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................2811.0011000000
.............................................AAATATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2711.0010001000
........................................GATTAAAATATCCATCGAGCAACAG.........................................................................................................................................................................................................................................................2511.0011000000
.................................................................................................................................................................................TA--CCCCAA-----AGCTATTATTTGTGTCCGGC......................................................................................................2811.0010100000
...............................................ATATCCATCGAGCAACAGAATG.....................................................................................................................................................................................................................................................2211.0010001000
..........................................TTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1811.0010100000
..............................................AATATCCATCGAGCAACAG.........................................................................................................................................................................................................................................................1911.0010100000
.........................................ATTAAAATATCCATCGAGCAACAGAAT......................................................................................................................................................................................................................................................2711.0010000100
...............................................ATATCCATCGAGCAACAGAAT......................................................................................................................................................................................................................................................2111.0010000010
......................................GTGATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2611.0010001000
...........................................TAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2111.0010000010
....................................................................................................................................GCAA-CGACAGCAGCT-TGTCCCACGT...........................................................................................................................................................2511.0010100000
..........................................TTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2211.0010001000
........................................GATTAAAATATCCATCGAGCA.............................................................................................................................................................................................................................................................2111.0011000000
.......................................TGATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2411.0010000100
droYak3
CAAATTTCTTATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCACCGAAAAACTGGCTAAAATCGAATCAGAAAACGGTCTAACAACCAT-AAAACGGCAA-CGACAGCAGCT-GGTCCCACGTGCATAGTGCCAATTTTGTTA--CCCCCGA----ATCCATTATTTGTGTCCGGCGTCTTAAAACCGACTTTTATATTCA-TTACAAAAATCA-------------GTTCATACCGTAACTT---TAA------AAGCAT-----------CTTA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................GATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................20112.001200610050000
.....................................................ATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................1927.001401220090000
........................................GATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2415.00503200000000
....................................................CATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2015.00501000040000
.........................................ATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2214.00400300010000
.........................................ATTAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2314.00402100010000
.........................................ATTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1913.00302100000000
........................................GATTAAAATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2613.00300100020000
.........................................ATTAAAATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2512.00200000020000
........................................GATTAAAATATCCATCGAG...............................................................................................................................................................................................................................................................1912.00201100000000
.........................................ATTAAAATATCCATCGAGCA.............................................................................................................................................................................................................................................................2012.00200000020000
........................................GATTAAAATATCCATCGAGCAACAGAAT......................................................................................................................................................................................................................................................2812.00201000010000
..............................................AATATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2612.00200000020000
.......................................TGATTAAAATATCCATCGAGCAACAGAA.......................................................................................................................................................................................................................................................2812.00202000000000
...............................................ATATCCATCGAGCAACAGAATG.....................................................................................................................................................................................................................................................2212.00200010010000
...........................................TAAAATATCCATCGAGCAACAGAA.......................................................................................................................................................................................................................................................2411.00101000000000
...................................................CCATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................1911.00101000000000
........................................GATTAAAATATCCATCGAGCAACAG.........................................................................................................................................................................................................................................................2511.00100100000000
...................................GCGGTGATTAAAATATCCATCGAG...............................................................................................................................................................................................................................................................2411.00101000000000
.........................................ATTAAAATATCCATCGAGCAACAG.........................................................................................................................................................................................................................................................2411.00100000010000
.................................................ATCCATCGAGCAACAGAATGGTACGT...............................................................................................................................................................................................................................................2611.00100000010000
..............................................AATATCCATCGAGCAACAG.........................................................................................................................................................................................................................................................1911.00101000000000
...............................................ATATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2511.00100000100000
...................................GCGGTGATTAAAATATCC.....................................................................................................................................................................................................................................................................1811.00100100000000
....................................................CATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................1811.00100000010000
.................................................ATCCATCGAGCAACAGAATGGGC..................................................................................................................................................................................................................................................2311.00100100000000
.................................................ATCCATCGAGCAACAGAATG.....................................................................................................................................................................................................................................................2011.00100000010000
.............................................AAATATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2711.00100000010000
..............................................................................................................CGGTCTAACAACCAT-AAAACGGC....................................................................................................................................................................................2311.00100100000000
......................................GTGATTAAAATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2811.00100000010000
..............................................AATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................2011.00101000000000
...........................................TAAAATATCCATCGAGCAACA..........................................................................................................................................................................................................................................................2111.00100000010000
...................................................CCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2111.00100000010000
...........................................TAAAATATCCATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................2711.00101000000000
...............................................ATATCCATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................2311.00100100000000
.........................................ATTAAAATATCCATCGAGCAACAGAAT......................................................................................................................................................................................................................................................2711.00100100000000
..........................................TTAAAATATCCATCGAGC..............................................................................................................................................................................................................................................................1811.00110000000000
........................................GATTAAAATATCCATCGAGCAAC...........................................................................................................................................................................................................................................................2311.00100100000000
.................................................ATCCATCGAGCAACAGAATGG....................................................................................................................................................................................................................................................2111.00100010000000
...............................................ATATCCATCGAGCAACAGA........................................................................................................................................................................................................................................................1911.00100100000000
.................................................ATCCATCGAGCAACAGAATGGGT..................................................................................................................................................................................................................................................2311.00100000100000
....................................................CATCGAGCAACAGAATGGG...................................................................................................................................................................................................................................................1911.00100010000000
.....................................................ATCGAGCAACAGAATGGG...................................................................................................................................................................................................................................................1820.50100100000000
droEug1
TTAATTTTTCATTTTA-------------------GCGGCGATAAAAATATCCATCAAGCAACAGAATGGTACGTACCAACAAAAAACAGTGTCCAATCAAAATAGGAAACCGGAAAATAACCAG-AAAATG-CAA-CGAAACCGGCCGTTACCCACGTGCATATTG-ATA-TTAGCTA--CCCCTAA----AACAATTATTTATGTGTAG--------CTGTGGCTTTACAATGCC-GTTCTGTTCAAAATGAGAATAAAAAATTCAAAGTGAAAGTT---AAGTC----AAGAAATTCTCAAATTTCCTA--SizeHit CountTotal NormTotal
No Reads
droBia1
TTAATTTCTCATTTTA-------------------GCGGTGAATAAAATATCCATCCAGCAACAGAATGGTACGTAGCAACTAAAAACCGGCGGAAATCAAGACCGAAACCGCACAAAGAACCAA-AAAATGTCGG-CTATAACCGCAGCTTCCCACGTGCATAG-GCGAATTTTGCTA--CCCCAAAA---AACAATTATTTATGTCCCGCGTCTTAGAGGTGCCTTTATTGCAAC-ATGCTGGAAGCA-------------GTGCAATCGAAAGATT---CT---T--------------------TGTA--SizeHit CountTotal NormTotal
No Reads
droTak1
ATAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCGAGCAACAGAATGGTACGTACCAACGAAATGCCGGATAAAATCGGAACCGAA-ACGGATAAAAAACCCA-AAAATGTCGG-CGTCAGAAGCTGCTACCCACGTGCATAGT-CAAATATCGCTA--CCCCAAAA---AAGCATTATTTATGTGCCGCGTCTTAGCTGTGGGTCTAATAAACCCGATCGGAATGCA-------------ATGTAAACGAATACTT---AT---TCGTAAAC-------------AACA--SizeHit CountTotal NormTotal
No Reads
droEle1
ATAATTTCTCATTTTA-------------------GCGGTGATTAAAATAACCATCAAGCAACATAATGGTAGGTTTCGACAAGACATCGGGAAAAAATATTTTGGAGTACCGGGAACTAACCAA-AA-ACATCAA-CTGCGGCAGCAGCAGCCCACGTGCATTAAATAAAAATTACTA--CCCTAAA----AACAATAATTTGTGTGCGGTGACTGT-CTGTGACTTCTGTTTTCC-CATCGGAACGCA-------------GC------AATAA-TT----AA------GAAAAA-----------TCGT--SizeHit CountTotal NormTotal
No Reads
droRho1
ATAATTTCTCATTTTA-------------------GCGGTGATTAAAGTAACCATCAAGAAACATAATGGTAGGTTTCGACAGAATATCGGATACAATTAATATACCGAACCGGGAAATAACCAA-AA-ACATCAG-CCGCGGAAGCAGCAGCCCACGTGCATAATG-AAATATTGCTA--CCCCAAA----AACAATAATTTGTGCGCGGAGTCTTGCTGTGACATTTGGTATTCC-CTGCGGAACGCAGT--ATATCAAA-AATTAAGAAAATGCTT---TGC------AAACAA-----------CTTACASizeHit CountTotal NormTotal
No Reads
droFic1
TTAATTTCTCATTTTA-------------------GCGGTGATTAAAATATCCATCAAGCAACAGAATGGTGGGTTCTAACAAAAAACCGGCTGTAATTTAAGTGATGAACCGGCAAATAACCAA-AAAAAGACGGCCAACGGCAAAAGAAGCCCACGTGCATAGTA-AAATTTGTCCA--CCCCAAA----AACAACAATTTATGTGCGGCGTCTAACCTGTGACTCCATTATTCC-GCTCGATATTAG-------------ATGCTAGCAAAAACTGGCATAA------GTGCAA-----------CATA--SizeHit CountTotal NormTotal
No Reads
droKik1
CCAATTTCTCATTTTA-------------------GCGGTG-TAAACATATTCATCAAGCTACAGAATGGTGGGTGCCAATGAAAAA-TGCTTAAAATTCTATCCGAAAATGGGAAAATAACCTGAAAAACGACAG-CGAAAAGGGCG-CACTCCACGTGCAAAGAG-ATA--TTGTGACGCCCGAAAAAAAAAAAATAATTTATGTGTGACAACCTC-AGCTGTGTTTCATATAAA-AACCATCA----------------------------------------------------------------AG--SizeHit CountTotal NormTotal
No Reads
droAna3
TTTGTTTCTTGTTTTA-------------------G-GTTGAT--AAATATCCATT------CAAAATGGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..TGTTTCTTGTTTTA-------------------G-GTTGAT--AAATATC......................................................................................................................................................................................................................................................................2812.002020000
..........GTTTTA-------------------G-GTTGAT--AAATATC......................................................................................................................................................................................................................................................................2012.002110000
.........TGTTTTA-------------------G-GTTGAT--AAATATC......................................................................................................................................................................................................................................................................2111.001010000
...GTTTCTTGTTTTA-------------------G-GTTGAT--AAATATC......................................................................................................................................................................................................................................................................2711.001010000
.TTGTTTCTTGTTTTA-------------------G-GTT..................................................................................................................................................................................................................................................................................1911.001001000
droBip1
TTTATTCCTCTTGTTCCATTTTAGAAATATCGCAAGCGGTGATCAAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 03:25 PM