ID:

dsi_14018

 Coordinate:

x:832890-833039 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.4 -9.3 -9.0

Flybase annnotation

CDS [x_833040_833248_+]; exon [x_833040_833248_+]; intron [x_832268_833039_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGCTCTAGCGATTTTTGTTATCCAGCACCTTCCTCTATCTCTTTCTCTCTGTATCTCTCTCTCGTTCGCATCAACTCGAATACGTTTCTCTCGCTCTGATTCGAATTAGTTATTGCTGCCACCCTTCTCCTCCCGTACTAAAATCGCACATCTTCGTGTGTTCTCTGCTCTTATTTTGGCCGAATTCGCTGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTTCTGC
**************************************************************************.........((......(((...(((.(((..((((..........................))))...)))...)))...)))........)).********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.................................................................................................................................................................................................................TCAAGCGACTGCAGCAGGAAACCTC................ 25 0 1 5.00 5 0 0 3 1 0 0 0 0 1 0 0
..........................................................................................................................................................CGTGTGTTGTCGGCTCTTA............................................................................. 19 2 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CATCTTCGTGTGTTCTCTGCT................................................................................. 21 0 1 4.00 4 0 4 0 0 0 0 0 0 0 0 0
...........................................TCTCTCTGTATCTCTCTC............................................................................................................................................................................................. 18 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0
.........................................................................................................................................................................................................GGAGGACCTCAAGCGACTGC............................. 20 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0
...........................................................................................................................................................GTGTGTTGTCGGCTCTTA............................................................................. 18 2 4 1.25 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................CTCGAATACGTTTCTCTCGCTCTGATT..................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAGCGACTGCAGCAGGAAA.................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................AAGCGACTGCAGCAGGAAACCTCC............... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CCTCAAGCGACTGCAGCA......................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................CTGCTACCCTTACCCTCCCGT.................................................................................................................. 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCAGCAGGAAACCTCCGGCGGCAG....... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................GTCGTGTGTTGTCGGCTCTTA............................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CAAGCGACTGCAGCAGGAAACCTCC............... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.GCTCTAGCGATTTTTGTTATCCAG................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCGTGTGTTGTCGGCTCTTA............................................................................. 20 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGTGTGTTGTCGGCTCTT.............................................................................. 18 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0
...............................................................GTTCGGATCAACTCGAGGACG...................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................CGTGTGTTGTCGGCTCTTAA............................................................................ 20 3 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................ACACATCGTCATGTGTTCTC..................................................................................... 20 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1
...................................................................................................................................................................................................................................AAACCTCCGGCGCGAGCT..... 18 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................CGTGTGTTTTCGGCTCTTA............................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGTGTGTTGTCAGCTCTT.............................................................................. 18 2 6 0.33 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TGTGTTGTCGGCTCTTA............................................................................. 17 2 17 0.29 5 5 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGTGTGTTGTCAGCTCTTAA............................................................................ 20 3 7 0.29 2 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CCGTGTGTTGTCAGCTCTTA............................................................................. 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GCGTGTGTTGTCGGCTCTT.............................................................................. 19 3 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................ACGTGTGTTGTCGGCTCTTA............................................................................. 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................CCGTACTAAAATCGA....................................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTCTCGCTCTCATTCGA.................................................................................................................................................. 17 1 10 0.10 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................GTGTGTTGTCGGCTCTTAA............................................................................ 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACCTCCGGCGGGATCT..... 16 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GTGTGTTTTCGGCTCTTA............................................................................. 18 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CGTGTGTTGTCGGCTCT............................................................................... 17 2 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TTTTGGCCGACGTCGCT............................................................ 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

CCGAGATCGCTAAAAACAATAGGTCGTGGAAGGAGATAGAGAAAGAGAGACATAGAGAGAGAGCAAGCGTAGTTGAGCTTATGCAAAGAGAGCGAGACTAAGCTTAATCAATAACGACGGTGGGAAGAGGAGGGCATGATTTTAGCGTGTAGAAGCACACAAGAGACGAGAATAAAACCGGCTTAAGCGACTAGGACGTCTCCTCCTGGAGTTCGCTGACGTCGTCCTTTGGAGGCCGCCGTCGAAGACG
*********************************************************************************.........((......(((...(((.(((..((((..........................))))...)))...)))...)))........)).************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................AGGAGAGCATGATTT............................................................................................................ 15 1 8 7.13 57 57 0 0 0 0 0 0
.....................................................................................................................CGGTGCGAAGAGGAGGGTAT................................................................................................................. 20 2 2 0.50 1 0 0 1 0 0 0 0
..............................................................CCAAGCGTAGTTGAGC............................................................................................................................................................................ 16 1 3 0.33 1 0 1 0 0 0 0 0
.......................................................................................GAGGGCGAGCCTAAGCTT................................................................................................................................................. 18 2 7 0.29 2 0 0 0 2 0 0 0
...........................................................AGCCCAAGCGTAGTTGAGC............................................................................................................................................................................ 19 2 4 0.25 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................GGCCGCCGTCGAAGA.. 15 0 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................................................AGGAGAGCATGATTTTTG......................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................CTCCTCTTGGAGTTCGATGAG.............................. 21 3 6 0.17 1 0 0 0 0 0 1 0
..........................................................CAGCCCAAGCGTAGTTGAGC............................................................................................................................................................................ 20 3 6 0.17 1 0 1 0 0 0 0 0
.................................................................................................................................................................................CCGGCTTAAGGGACT.......................................................... 15 1 6 0.17 1 0 1 0 0 0 0 0
...........AAAAAAAATAGGTCGTGGCAA.......................................................................................................................................................................................................................... 21 3 9 0.11 1 0 1 0 0 0 0 0
........................................................................................................................TGGGAAGAGGGGGGC................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 1
..........................................................................................................................GCAAGAGGATGGCATG................................................................................................................ 16 2 12 0.08 1 0 1 0 0 0 0 0
......................................................................................................................GCTGGGAAGAGGGGGGC................................................................................................................... 17 2 15 0.07 1 1 0 0 0 0 0 0
..............................................................................................................................................................................AAAACGGCTTAAGGGAATAG........................................................ 20 3 16 0.06 1 0 0 0 0 0 0 1
...........................................................AGCCCAAGCGTAGTTGAGT............................................................................................................................................................................ 19 3 18 0.06 1 0 1 0 0 0 0 0
................................................GCTATAGAGAGAGAGCA......................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:832840-833089 + dsi_14018 GGCTCT----------AGCG-ATT-----TTTGTTATCCAGC----A--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTCGTT-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCTTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCG---T--GTG-TTCTCTGC--TCTTATTTTGGCCG-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTTCTGC
droSec2 scaffold_10:773114-773363 + GGCTCT----------AGCG-ATT-----TTTGTTATCCAGC----T--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTCGTC-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTTGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCTTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCA---T--GTG-TTCTCTGC--TCTTATTTTGGCCG-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTTCTGC
dm3 chrX:937046-937295 + GGATCA----------AGCG-ATT-----TTTGATATCCAGC----A--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTTGTT-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCCTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCG---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCGGGCGGCTGCTTCAGC
droEre2 scaffold_4644:915306-915544 + C----C----------AGCG-ATT-----TTTGTTGCCCAGC----A--CCT---TCCTCTCTCTCTC------TCT---------------CTCT--------------G-----------TCTCTCTGTCGTT-----------------C-----------------GCATCAAC---TCGTATACGTTCCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCC---------------------------------------------------------------------------------------------------------------------AC-------------TCCG-CCCTTACTAAAATCGCACTACCTTG---T--GTG-TTCTCTGC--TCTTCTTTTGGCCC-AATT-CGC-GGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTACAGC
droYak3 X:854242-854496 + TGTGAA----------AGCG-ATT-----TTTGTTATCCAGCCA--A--CCT---TCCTCTCTCTCTC------TCT---------------CTCT--------------CTTCCTCTCGTTCGCCTCTCTCGTT-----------------C-----------------GCATCAAC---TCGAATACGTTCCT----CT--CGCTCTGATTCGAATTAGTTATTGCTCTC---------------------------------------------------------------------------------------------------------------------AC-------------TCGG-CCCGTACTAAAATCGCACCACTTTG---T--GTG-TTCTCTGC--TCTTCTTTTGGCC--AATT-CGC-GGATCCTGCAGAAGAGGACCTGAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTACAGC
droEug1 scf7180000409277:1198695-1198940 + GT--GA----------AACAATAT-----ATCGCTATCTAGC----CCC-AA---CGCCTTCTTTCTT------TCT---------------CTCT----------------------------TCTCTCTCGTT-----------------C-----------------GCATCAAC---TCAAATATGTTTCT----CT--CGCTCTGATTCAAATT-GTTATTATTATT---------------------------------------------------------------------G------------------------------------------ATTTAAT-------------TAGT-CCCGTACTAAAGTCGCACTATTCCA---T--ATG-TTCTCTGC--TCTTATTTTGGCACGAATT-CGC-GGATCCTGCAGAGGAGGACCTTAAGCGGCTGCAGCAGGAAACCTCCGGTGGCAGCTACAGT
droBia1 scf7180000302069:634916-635149 + AGT---------------CG-CTT-----T--------CAGCTAGCCCC-AT---CCCTCTCTCTCTT------TCT---------------CTCT--------------G-------------TCTCTCTCGTT-----------------C-----------------GCATCAAC---TTGAATACGATTCT----CT--CGCTCTGATTCGAATGTTTTACGC---------------------------------------------------------------------------------------------------------------------ATTTAAC-------------GCCA-CCCGTACTAAAGTCGCAAAATTGCA---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-GGTTACGC-GGATCCCGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGC
droTak1 scf7180000415704:532445-532704 - GTG-AA-----AAATAAACAAAAT-----ATCGTTATCCAGCTAGCCCC-CT---CCCTCTCTCTCTCTT----TCT---------------CTA---------------------------TGTCTCTCTCGTT-----------------C-----------------GCATCAACTCCTCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAAATAT-GTTG------------------------------------------------------------------------------------------------------------------ATTTAAC-------------ACCTCCGTGTACTAAAGTCGCACCATTCGA---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-GATTATGC-GTATCCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGC
droEle1 scf7180000491013:1540505-1540757 + AGTGAA----------ACTA-AAT-----GTCATTGTCTAGCCACCCCC-CC---TCCTCTCTCTCTC------TCT------CTCTTCT--CTCT--------------GTA---------TATCTCGTTCGTT-----------------C-----------------GCATCAGC---TCGAATACGTTTCT----CT--CGCTCTGAT------TAGCTATTGCATTTA--------------------------------------------------------------CT---CT---------------------------------------------------------------CAC-TCCATGCTAAATTCCCATTGTTTTC---T--GTG-TTCTCTCC--ATTTATTTTGGCCC-AATG-CTC-GGACTCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGC
droRho1 scf7180000779976:289625-289878 - GTG-AA----------AC-TAAATACGAAATCGTTATCTAGC----ACC-CT---CCCTCTCTCTCT-------GCT---------------CTAT--------------GAA---------TATCTCGTTCGTT-----------------C-----------------GCCTCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCAAATTAGCAATTGATTTTA--------------------------------------------------------------CTCCTCA---------------------------------------------------------------TCC-CCCGTACTAAAGTTCCATAAATTTC---T--GTG-TTCTCTAC--TCTTATTTTGGCCC-AATG-CTC-GGATTCTGCAGAGGAGGACCTCAAGCGTCTGCAGCAGGAGACCTCCGGCGGCAACTACAGC
droFic1 scf7180000454072:2185311-2185561 - C----CAGTGAA----AC-CAA-----------ATAGCCCCT----A--CTT---ACCTATGTATCTCTTCATTGAT---------------CTCT--------------GTC---------TCTCTCGTGCGTT-----------------C-----------------GCCTCACC---TCGAATACGTTTTT----CT--CGCTCTGACTCGAATTAGTTAATGGCCTT----------------------------------------------------------------ACTTCT---------------------------------------------------------------CAG-CCTATACTAAAGTCGCGCCATTTTT---T--GTG-TTCTCTAC--TCTTATTTTGGCCC-AACCGCGC-GGATCCTACAGAGGAGGACCTCAAGCGGCTGCAACAGGAGACCTCCGGCGGCAACTATAGC
droKik1 scf7180000301810:37156-37422 + TA---------------ACA-ATT-------------CCAGCTACCTCC-CTCCCCCCTCTCTCTCTC------TCTCTCTCTCTCTTCGCTCT----------------GTG---------TGTGCCGT----------------------CCCCCTCTCTCTTGTTCCGCATCAACCAAACGAATACGTTTCT----CTCTCGCTCTGATTCGAATTAGTTAACA-----A--------------------------------------------------------------TTATTTT------------------------------------------ACTCAAA--------------------TATTCTAAAGTCTTCC-GTTTTCTCTT--CAT-TTCTCTGC--TCTTCTTTTGGG---------GC-GCATCCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGTGGCAGCTACAGC
droAna3 scaffold_12929:718864-719065 + AGG-------------------------------------------A--CCT---CCCTCTCTT----------GCT---------------CTCT------TGCTCTCTAGC---------CGTCTCTCTCCGT-----------------T-----------------CCAACTAC---TGACATCTCCCTCT----CT--CCCTTTAGCCC--------TATTGTTCCC---------------------------------------------------------------------------------------------------------------------CC-------------ACCCCCGATCACTAA--CCCCAT----TTC---T--GTA-T--TCTGC-TTCTTCTTTTGGTCC----------TGA---TCCAGAGGAGGACCTGAAACGGCTGCAGCAGGAGACCTCCGGTGGCAGTTACAGC
droBip1 scf7180000394782:25541-25790 - ATCCCG----------AGCG-A----------------GAGG----A--CGA---GCCTCTCTTTCTC------CGC---------------CTCT------------CTA-----------GCCATCTCTTTTT-----------------C-----------------GTGTCAAC---T-AACTATGTATCT----CT--CTCTCTGTTTTAGG---------ACATCGACCTTAAGTT----------------------------------------------------------TT------------------------TT---------TTTTGT-GATAAAAAATACTAACTTTTTTT--------------TTG---TATTTTT---TATGTA-TTCTGTTC--TTTTATTTGGACACTGATT-GGCGGGATGCTTCAGAGGAGGATCTGAAACGATTGCAACAGGAGACCTCCGGTGGAAGCTATAGC
dp5 XL_group1a:5221643-5221905 - CACTCA----------AGCC-ACT-----GTGTCTGTTCCGC----T-----------------------------------------------CTAGACCATGCTCTCCCGT---------CGTCGCACCGC--GTTCTCTCTCTCTCTAT---------------------------------------CTCGCTCTCTCA--C----------G----------------CCTCACGCCTTGACTCAGTCAGCAGGCTAAAAACGCGCTCTTGACGCTAGTCCTAGTCCCTCCT---CTCACCCGCTTTAACGTTTCTC---------------------------------------------------------------TCTGCCTTG---T--GTGCTTCTCTCCC-TCTTGTTTCCG-------------------CGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGAAACTACAGC
droPer2 scaffold_11:1808044-1808306 - CATTCA----------AGCC-ACT-----GTGTCTGTTCCGC----T-----------------------------------------------CTAGACCATGCTCTCCCGT---------CGTCGCACCGC--GTTCTCTCTCTCTCTAT---------------------------------------CTCGCTCTCTCA--C----------G----------------CCTCACGCCTTGACTCAGTCAGCAGGCTAAAAACGCGCTCTTGACGCTAGTCCTAGTCCCTCCT---CTCACCCGCTTTAACGTTTCTC---------------------------------------------------------------TCTGCCTTG---T--GTGCTTCTCTCCC-TCTTGTTTCCG-------------------CGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGAAACTACAGC
droWil2 scf2_1100000004590:1181836-1181973 + CT-------------------------------------------------------CTCTCTCTCTA------TCT---------------CTCT--------------CGC---------TCACTCGCTCGTT-----------------C-----------------CCTTTCTC---AC------------------------------------------------------------------------------------------------------------------------------TTTTTCTCTTTTTCTAATTTTGTGTGCATTTTGTCATA--GA-------------TTTT-TGTATACTAAAGTCA---ATTTTTG---T--CTC-TTATGTTC--TCTTATTTTTGCC------------------------------------------------------------------------
droVir3 scaffold_12726:1689907-1689967 - TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTACAGAGGAGGATCTGAAGCGTCTGCAACAGGAGACATCCGGTGGCAACTATAGC
droMoj3 scaffold_6473:6831884-6831940 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACAGAGGAGGATCTGAAGCGCCTGCAGCAGGAGACGTCGGGCGGCAACTATAGC
droGri2 scaffold_15203:7988753-7988807 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAGGAGGATCTGAAGCGTCTGCAGCAAGAAACATCGGGCGGCAACTATAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGCTCT----------AGCG-ATT-----TTTGTTATCCAGC----A--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTCGTT-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCTTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCG---T--GTG-TTCTCTGC--TCTTATTTTGGCCG-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTTCTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCGACTGCAGCAGGAAACCTC................2515.00500000001000031000
..................................................................................................................................................................................................................................................................................................................................................................................................CATCTTCG---T--GTG-TTCTCTGC--T....................................................................................2114.00400400000000000000
..........................................................................TCT---------------CTCT--------------GTA---------TCTCTCTC.................................................................................................................................................................................................................................................................................................................................................................................1812.00200000200000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACCTCAAGCGACTGC.............................2012.00220000000000000000
.................................................................................................................................................................................C---TCGAATACGTTTCT----CT--CGCTCTGATT..............................................................................................................................................................................................................................................................................................2711.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGACTGCAGCAGGAAA....................1911.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGACTGCAGCAGGAAACCTCC...............2411.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAAGCGACTGCAGCA.........................1811.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGGAAACCTCCGGCGGCAG.......2511.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGACTGCAGCAGGAAACCTCC...............2511.00100000000000010000
.GCTCT----------AGCG-ATT-----TTTGTTATCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CCGTACTAAAATCGA..................................................................................................................1580.13100000000010000000
droSec2
GGCTCT----------AGCG-ATT-----TTTGTTATCCAGC----T--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTCGTC-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTTGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCTTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCA---T--GTG-TTCTCTGC--TCTTATTTTGGCCG-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTTCTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAAACCTCCGGCGGC.........1911.0010010
dm3
GGATCA----------AGCG-ATT-----TTTGATATCCAGC----A--CCT---TCCTCTATCTCTT------TCT---------------CTCT--------------GTA---------TCTCTCTCTTGTT-----------------C-----------------GCATCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCCTCT---------------------------------------------------------------CCT-CCCGTACTAAAATCGCACATCTTCG---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-AATT-CGC-TGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCGGGCGGCTGCTTCAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGACTGCAGCAGGAAACCTCGGGC............2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACCTCAAGCGACTGCAGCAGGAG.....................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTCT----CT--CGCTCTGATTCGAATTAGT.....................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGGAAACCTCGGGCGGCTG.......2513.0030000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAGCAGGAAACCTCGGGCGGC.........2613.0030000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTCG---T--GTG-TTCTCTGC--TCTTATTT.............................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCGACTGCAGCAGGAAACCTCGGG.............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGACTGCAGCAGGAAACCTCGGG.............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAACCTCGGGCGGCTGCTT....2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTGCAGCAGGAAACCTCGGGC............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGGAAACCTCGGGCG...........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-TGATCCTGCAGAGGAGGACCTCA......................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTGCAGCAGGAAACCTCGGGCG...........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-CGC-TGATCCTGCAGAGG...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................CTCTCTCTTGTT-----------------C-----------------GCATCAAC---..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CT--------------GTA---------TCTCTCTCTTGTT-----------------C-----------------GC.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCTGCAGAGGAGGACCTCAAGCG..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCAAGCGACTGCAGCAG........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ATTCGAATTAGTTATTGCTGCC...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGACCTCAAGCGACTGCAGC..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCGACTGCAGCAGGAAACCTCG...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTCGGGCGGCTGCTTC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCGACTGCAGCAGGAAAC...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATTCGAATTAGTTATTGCTGCC...........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCC-AATT-CGC-TGATCCTGCAGA.................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCAAGCGACTGCAGCAGG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCGACTGCAGCAGG.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TT-CGC-TGATCCTGCAGAGGAGG............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAGCAGGAAACCTCGGGCG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...TCA----------AGCG-ATT-----TTTGATATCCAGC----A--CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACCTCAAGCGACTGC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................TCT---------------CTCT--------------GTA---------TCTCTCTCTTGT.............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TATTGCTGCCA--------------------------------------------------------------CCCCTCT---------------------------------------------------------------CCT-CCCG..............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCGACTGCAGCAGGA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................TCT----CT--CGCTCTGATTCGAATTAGT.....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCAAGCGACTGCAGCAGG.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTATTTTGGCCC-AATT-CGC-TGATCC.......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGACTGCAGCAGGAAAC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TT-----TTTGATATCCAGC----A--CCT---TCCTCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGAGGACCTCAAGCGACTGCAGCAT........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG---T--GTG-TTCTCTGC--TCTTATT..............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTCGAATTAGTTATTGCTGCCA--------------------------------------------------------------CCCCT.......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCAAGCGACTGCAGCAGGAAACC..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAACCTCGGGCGGCTGCTTC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCG---T--GTG-TTCTCTGC--TCTTAT...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTCG---T--GTG-TTCTCTGC--TCTTA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAAACCTCGGGCGGC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................T------TCT---------------CTCT--------------GTA---------TCTCTCTCTTGTT-----------------...........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACCTCAAGCGACTGCA............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TT-CGC-TGATCCTGCAGAGGAGGACCT........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TTCGAATTAGTTATTGCTGCC...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGACCTCAAGCGACTGCA............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCAGCAGGAAACCTCGGGC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACCTCGGGCGGCTGCTTC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGACCTCAAGCGACTGCAGCAC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CGC-TGATCCTGCAGAGGA..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAACCTCGGGCGGCTGCT.....2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGACCTCAAGCGACTGC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACTGCAGCAGGAAACCT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACGTTTCT----CT--CGCTCTGATTCGAA..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................CTGATTCGAATTAGTTATTGCTGC............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CT----CT--CGCTCTGATTCGAATTAGTTATTGCT..............................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-CGC-TGATCCTGCAGAGGAGGA...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCGACTGCAGCATC.......................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
C----C----------AGCG-ATT-----TTTGTTGCCCAGC----A--CCT---TCCTCTCTCTCTC------TCT---------------CTCT--------------G-----------TCTCTCTGTCGTT-----------------C-----------------GCATCAAC---TCGTATACGTTCCT----CT--CGCTCTGATTCGAATTAGTTATTGCTGCC---------------------------------------------------------------------------------------------------------------------AC-------------TCCG-CCCTTACTAAAATCGCACTACCTTG---T--GTG-TTCTCTGC--TCTTCTTTTGGCCC-AATT-CGC-GGATCCTGCAGAGGAGGACCTCAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTACAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACCTCAAGCGACTGCAGC..........................2311.0010100000
droYak3
TGTGAA----------AGCG-ATT-----TTTGTTATCCAGCCA--A--CCT---TCCTCTCTCTCTC------TCT---------------CTCT--------------CTTCCTCTCGTTCGCCTCTCTCGTT-----------------C-----------------GCATCAAC---TCGAATACGTTCCT----CT--CGCTCTGATTCGAATTAGTTATTGCTCTC---------------------------------------------------------------------------------------------------------------------AC-------------TCGG-CCCGTACTAAAATCGCACCACTTTG---T--GTG-TTCTCTGC--TCTTCTTTTGGCC--AATT-CGC-GGATCCTGCAGAAGAGGACCTGAAGCGACTGCAGCAGGAAACCTCCGGCGGCAGCTACAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCTGAAGCGACTGCAGCAG........................2311.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGGACCTGAAGCGACTGCAGCA.........................2511.00100000000001
droEug1
GT--GA----------AACAATAT-----ATCGCTATCTAGC----CCC-AA---CGCCTTCTTTCTT------TCT---------------CTCT----------------------------TCTCTCTCGTT-----------------C-----------------GCATCAAC---TCAAATATGTTTCT----CT--CGCTCTGATTCAAATT-GTTATTATTATT---------------------------------------------------------------------G------------------------------------------ATTTAAT-------------TAGT-CCCGTACTAAAGTCGCACTATTCCA---T--ATG-TTCTCTGC--TCTTATTTTGGCACGAATT-CGC-GGATCCTGCAGAGGAGGACCTTAAGCGGCTGCAGCAGGAAACCTCCGGTGGCAGCTACAGTSizeHit CountTotal NormTotal
No Reads
droBia1
AGT---------------CG-CTT-----T--------CAGCTAGCCCC-AT---CCCTCTCTCTCTT------TCT---------------CTCT--------------G-------------TCTCTCTCGTT-----------------C-----------------GCATCAAC---TTGAATACGATTCT----CT--CGCTCTGATTCGAATGTTTTACGC---------------------------------------------------------------------------------------------------------------------ATTTAAC-------------GCCA-CCCGTACTAAAGTCGCAAAATTGCA---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-GGTTACGC-GGATCCCGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GTG-AA-----AAATAAACAAAAT-----ATCGTTATCCAGCTAGCCCC-CT---CCCTCTCTCTCTCTT----TCT---------------CTA---------------------------TGTCTCTCTCGTT-----------------C-----------------GCATCAACTCCTCGAATACGTTTCT----CT--CGCTCTGATTCGAATTAAATAT-GTTG------------------------------------------------------------------------------------------------------------------ATTTAAC-------------ACCTCCGTGTACTAAAGTCGCACCATTCGA---T--GTG-TTCTCTGC--TCTTATTTTGGCCC-GATTATGC-GTATCCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGCSizeHit CountTotal NormTotal
No Reads
droEle1
AGTGAA----------ACTA-AAT-----GTCATTGTCTAGCCACCCCC-CC---TCCTCTCTCTCTC------TCT------CTCTTCT--CTCT--------------GTA---------TATCTCGTTCGTT-----------------C-----------------GCATCAGC---TCGAATACGTTTCT----CT--CGCTCTGAT------TAGCTATTGCATTTA--------------------------------------------------------------CT---CT---------------------------------------------------------------CAC-TCCATGCTAAATTCCCATTGTTTTC---T--GTG-TTCTCTCC--ATTTATTTTGGCCC-AATG-CTC-GGACTCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGCAACTACAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GTG-AA----------AC-TAAATACGAAATCGTTATCTAGC----ACC-CT---CCCTCTCTCTCT-------GCT---------------CTAT--------------GAA---------TATCTCGTTCGTT-----------------C-----------------GCCTCAAC---TCGAATACGTTTCT----CT--CGCTCTGATTCAAATTAGCAATTGATTTTA--------------------------------------------------------------CTCCTCA---------------------------------------------------------------TCC-CCCGTACTAAAGTTCCATAAATTTC---T--GTG-TTCTCTAC--TCTTATTTTGGCCC-AATG-CTC-GGATTCTGCAGAGGAGGACCTCAAGCGTCTGCAGCAGGAGACCTCCGGCGGCAACTACAGCSizeHit CountTotal NormTotal
No Reads
droFic1
C----CAGTGAA----AC-CAA-----------ATAGCCCCT----A--CTT---ACCTATGTATCTCTTCATTGAT---------------CTCT--------------GTC---------TCTCTCGTGCGTT-----------------C-----------------GCCTCACC---TCGAATACGTTTTT----CT--CGCTCTGACTCGAATTAGTTAATGGCCTT----------------------------------------------------------------ACTTCT---------------------------------------------------------------CAG-CCTATACTAAAGTCGCGCCATTTTT---T--GTG-TTCTCTAC--TCTTATTTTGGCCC-AACCGCGC-GGATCCTACAGAGGAGGACCTCAAGCGGCTGCAACAGGAGACCTCCGGCGGCAACTATAGCSizeHit CountTotal NormTotal
No Reads
droKik1
TA---------------ACA-ATT-------------CCAGCTACCTCC-CTCCCCCCTCTCTCTCTC------TCTCTCTCTCTCTTCGCTCT----------------GTG---------TGTGCCGT----------------------CCCCCTCTCTCTTGTTCCGCATCAACCAAACGAATACGTTTCT----CTCTCGCTCTGATTCGAATTAGTTAACA-----A--------------------------------------------------------------TTATTTT------------------------------------------ACTCAAA--------------------TATTCTAAAGTCTTCC-GTTTTCTCTT--CAT-TTCTCTGC--TCTTCTTTTGGG---------GC-GCATCCTGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGTGGCAGCTACAGCSizeHit CountTotal NormTotal
No Reads
droAna3
AGG-------------------------------------------A--CCT---CCCTCTCTT----------GCT---------------CTCT------TGCTCTCTAGC---------CGTCTCTCTCCGT-----------------T-----------------CCAACTAC---TGACATCTCCCTCT----CT--CCCTTTAGCCC--------TATTGTTCCC---------------------------------------------------------------------------------------------------------------------CC-------------ACCCCCGATCACTAA--CCCCAT----TTC---T--GTA-T--TCTGC-TTCTTCTTTTGGTCC----------TGA---TCCAGAGGAGGACCTGAAACGGCTGCAGCAGGAGACCTCCGGTGGCAGTTACAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCTGAAACGGCTGCAGCAGG.......................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGCTGCAGCAGGAGACCTCC...............2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTCCGGTGGCAGTTACA..2111.001100000
droBip1
ATCCCG----------AGCG-A----------------GAGG----A--CGA---GCCTCTCTTTCTC------CGC---------------CTCT------------CTA-----------GCCATCTCTTTTT-----------------C-----------------GTGTCAAC---T-AACTATGTATCT----CT--CTCTCTGTTTTAGG---------ACATCGACCTTAAGTT----------------------------------------------------------TT------------------------TT---------TTTTGT-GATAAAAAATACTAACTTTTTTT--------------TTG---TATTTTT---TATGTA-TTCTGTTC--TTTTATTTGGACACTGATT-GGCGGGATGCTTCAGAGGAGGATCTGAAACGATTGCAACAGGAGACCTCCGGTGGAAGCTATAGCSizeHit CountTotal NormTotal
No Reads
dp5
CACTCA----------AGCC-ACT-----GTGTCTGTTCCGC----T-----------------------------------------------CTAGACCATGCTCTCCCGT---------CGTCGCACCGC--GTTCTCTCTCTCTCTAT---------------------------------------CTCGCTCTCTCA--C----------G----------------CCTCACGCCTTGACTCAGTCAGCAGGCTAAAAACGCGCTCTTGACGCTAGTCCTAGTCCCTCCT---CTCACCCGCTTTAACGTTTCTC---------------------------------------------------------------TCTGCCTTG---T--GTGCTTCTCTCCC-TCTTGTTTCCG-------------------CGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGAAACTACAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................TAGTCCCTCCT---CTCACCCGC..............................................................................................................................................................................................2011.0010100000000
droPer2
CATTCA----------AGCC-ACT-----GTGTCTGTTCCGC----T-----------------------------------------------CTAGACCATGCTCTCCCGT---------CGTCGCACCGC--GTTCTCTCTCTCTCTAT---------------------------------------CTCGCTCTCTCA--C----------G----------------CCTCACGCCTTGACTCAGTCAGCAGGCTAAAAACGCGCTCTTGACGCTAGTCCTAGTCCCTCCT---CTCACCCGCTTTAACGTTTCTC---------------------------------------------------------------TCTGCCTTG---T--GTGCTTCTCTCCC-TCTTGTTTCCG-------------------CGCAGAGGAGGACCTCAAGCGGCTGCAGCAGGAGACCTCCGGCGGAAACTACAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGACCTCAAGCGGCTGCAGC..........................2411.001100000
droWil2
CT-------------------------------------------------------CTCTCTCTCTA------TCT---------------CTCT--------------CGC---------TCACTCGCTCGTT-----------------C-----------------CCTTTCTC---AC------------------------------------------------------------------------------------------------------------------------------TTTTTCTCTTTTTCTAATTTTGTGTGCATTTTGTCATA--GA-------------TTTT-TGTATACTAAAGTCA---ATTTTTG---T--CTC-TTATGTTC--TCTTATTTTTGCC------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTACAGAGGAGGATCTGAAGCGTCTGCAACAGGAGACATCCGGTGGCAACTATAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCGTCTGCAACAGGAGACATCCGGT............2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGCGTCTGCAACAGGA......................2011.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAACAGGAGACATCCGGT............2111.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCAACAGGAGACATCCGGTG...........2411.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGATCTGAAGCGTCTGCAA...........................2211.001000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGCGTCTGCAACAGGA......................2211.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACAGAGGAGGATCTGAAGCGCCTGCAGCAGGAGACGTCGGGCGGCAACTATAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAGGAGGATCTGAAGCGTCTGCAGCAAGAAACATCGGGCGGCAACTATAGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGAGGATCTGAAGCG..................................1811.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAACATCGGGCGGCAACTAT...2311.00110

Generated: 05/19/2015 at 05:16 AM