ID:

dsi_14015

 Coordinate:

3l:4757169-4757318 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3l_4757051_4757168_-]; CDS [3l_4757051_4757168_-]; intron [3l_4757169_4757553_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATATATAAACTTTCTAATAACATACCTGAACTTAACTCTAACTTTGGTAATTGGCTCTAACTTATGTTGAATTCAATGGTTTTGGTCAAATTTATCGCTGTTTCATAGTAATCCGACTGCTTTGCTTGCTTAATTCATTCAAATAATATACTAAACTACAGGTTTTATTGATTACTAATATAATGATTGTATTAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
**************************************************((((((..((((...((((....))))))))..))))))........((((((..((((((((..........(((((..............................)))))......))))))))((((((...))))))..))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M025
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M053
female body
 SRR902008
ovaries
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 GSM343915
embryo
.............................................................................................................................................................................................................................GAAGTCCAAGTATCTGAGCAATCCGGA.. 27 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................ATCTGAGCAATCCGGACT 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATGAAGTCCAAGTATCTGAGC.......... 21 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAAGTCCAAGTATCTGAGC.......... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..........................................TTTGGTAATTGGCTCTAACTTATGTT...................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................TCCATAGTAATCCGACTGCTTTGCT............................................................................................................................ 25 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTATCTGAGCAATCCGGA.. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................TTAACTCTAACTTTGGTAATTGGC................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CCAAGTATCTGAGCAATCC..... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................GTCCAAGTATCTGAGCAATCCGGA.. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............TAATAACATACCTGAACTTAACTCT................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTATCTGAGCAATCCGGACT 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................TGGTAATTGGCTCTAACTTATGTTGAA................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................CTTTGGTAATTGGCTCTAACT............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................ACAGGTTTGATTGATTACTAATATAATGAT............................................................... 30 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................CAAGTATCTGAGCAATCCGGACT 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTATCTGAGCAATCCGGACT 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................TAATGATTGTATTAAAACAGCGATGATG.......................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................AATGATTGTATTAAAACAGCGATGA............................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................TCGCGAGAAGATGAAGTCCAAGTAA................ 25 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................AAGCATCTGAGCAATCCGGACT 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAGTCCAAGTATCTGAGCAAT....... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GATGATGTTCGCGAGAAGATGAAGTC....................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................TTGTAATTGGCTCTAACTTATGTTGAA................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................ACTTATGTTGAACTCAGTG............................................................................................................................................................................ 19 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................TAACCGATGATGTTCGCGAGAAGATGA........................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGATGAAGTCCAAGTATCTGAGC.......... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAAGTCCAAGTATCTGAGCAATCCGGA.. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................TGGTAATTGGCTCTAACTTATGTTGAAT.................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GAAGATGAAGTCCAAGTATCTGAGCAATC...... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................TACCAATCCGATTGCTTTGCTT........................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
................................................................................TTTGGTCATTTTTAACGCTGTT.................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................GCGATACTGTTCGCGAG.................................. 17 2 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................CATAGTAATCCGACTCAGT................................................................................................................................ 19 3 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................GGTTTTGGTCGACTTGATC.......................................................................................................................................................... 19 3 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0
.....................................ATAACTTTGGTAATT...................................................................................................................................................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................CCTAATTCATTCAAA........................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TATATATTTGAAAGATTATTGTATGGACTTGAATTGAGATTGAAACCATTAACCGAGATTGAATACAACTTAAGTTACCAAAACCAGTTTAAATAGCGACAAAGTATCATTAGGCTGACGAAACGAACGAATTAAGTAAGTTTATTATATGATTTGATGTCCAAAATAACTAATGATTATATTACTAACATAATTTTGTCGCTACTACAAGCGCTCTTCTACTTCAGGTTCATAGACTCGTTAGGCCTGA
**************************************************((((((..((((...((((....))))))))..))))))........((((((..((((((((..........(((((..............................)))))......))))))))((((((...))))))..))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
............................................................................................................................................................................................................................ACTTCAGGTTCATAGACTCG.......... 20 0 1 1.00 1 0 1 0 0 0
.................................TGGAGATTGAAACCAGCAACCG................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................................GACTCGATAGGCCTG. 15 1 12 0.25 3 1 0 2 0 0
.........................................................................................................................................................................................................CGACCGCAAGCGCTCTTCTA............................. 20 3 7 0.14 1 1 0 0 0 0
..........................................................................TCACCAAAACCAGTTT................................................................................................................................................................ 16 1 8 0.13 1 0 0 0 1 0
......................ATGGACTTGAAGTGGG.................................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................................................ACATATTTTTGTTGCTAC............................................. 18 2 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:4757119-4757368 - dsi_14015 ATAT--ATA---A---ACTTTCTAATAACA--TACCTGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TT---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAT----ATAC----TAAACTACAG-G-TTT-------------------TATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
droSec2 scaffold_2:4797974-4798223 - TTAT--ATA---A---ACTTTCTAATAACA--TACCTGAT-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TT---CAATGGT-TTTGGTAAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----AAAC----TAGACTACAG-G-TTT-------------------TATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
dm3 chr3L:4811620-4811871 - ATAT--AAA---A---ACTTTCTAATAACA--TACCTGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCAACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----ATAC----TGAACTAGAG-G-TTT-------------------GATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGATGTTCGAGAGAAGATGAAGTCCAAATATCTGAGCAATCCGGACT
droEre2 scaffold_4784:7529976-7530224 - ATAT--ATA---A---ACTTTCTAATAATA--TACCTGAA-CCTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAA---GTT-GAA---------------------------------------TC---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCCT--AATTCATTCAAGTAAC----TTAC----TT-ACTACAG-C-CTT-------------------AATTG-CTTGTTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
droYak3 3L:5394947-5395196 - ATAT--ATA---A---ACTTTCCAATAATA--TACCCGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TC---AAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCAACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TAAACTGCAG-G-TTT-------------------GATTG-CTTATTAATGT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTATCGAATCCGGACT
droEug1 scf7180000409466:2594972-2595221 - ATAT--TTA---A---ACTTTCTAATCAAT--TAACTGAA-CTTT-------------------------ACTCTAATTTTGGT-TATTGGCTCT-AACTTTT---GTT-GAA---------------------------------------TTCT-CTTTGGTTTTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATACGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TAAA-TAAAG-GCTAC-------------------GACGG-ATAACTAATAA----A-----AT------------------------------------------TATAT---------------TAAAACAGCGATGATGTTCGCGAGAAAATGAAGTCCAAGTATCTGAGTAATCCGGACT
droBia1 scf7180000302428:2167875-2168125 + ATAT--TTG---A---ACTTTCCAATGATT--TAACTGAA-TTTC-------------------------AGACTAATTTTGGT-TATTGGCTCT-AACTTC----GTT-GAT---------------------------------------TTCTCTTTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----CTAT----TCAACTGGGT-A-ATG-------------------TATCG-TTGACTAATGT----A--A-AAT------------------------------------------TGTGT---------------TGAAACAGCGATGATGTGCGCGAGAAAATGAAGTCCAAGTATCTGAGCAATCCGGACT
droTak1 scf7180000415941:783437-783694 - ATATATTTG---A---ACTTTCTAATGATTTTTAACTGAA-TTTC-------------------------AAACTAATTTTGGT-TATTGGCTCT-AACTTTT--CGTT-GAT---------------------------------------TTCT-CCTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATATT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----GGTC----TAAACTCCGG-T-GTT--------------T----TTTTG-GTAACTAATGT----A--AGAAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTGCGCGAAAAGATGAAATCCAAGTATCTGAGCAATCCGGATT
droEle1 scf7180000491249:5761147-5761398 - ATAT--TGA---A---ACTTTCTAATGATT--CAACTGAA-TTTT-------------------------CATCTAACTTTGGT-AATTGGCTCT-AACTTTT---GTT-TGA---------------------------------------TTCC-CTTTGGT-TTTGGTCAAATTT-AAGGC--TGTTT-CATAGT--TATCCTACTGC-TTTGCTTGCTT--GATTCATTCAATTAAC----TCAC----TAAACTGGGG-G-TTC-------------------GATTG-GTTATTAATAT----A--AAATA------------------------------------------TGTAT---------------TAAAACAGCGACGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
droRho1 scf7180000779364:31351-31596 + ATAT--T-------------TCTAATGAAT--TAACTGGATTTTT-------------------------AAACTAATTTTGGT-TATTGGCTCT-AACTTTT---GTT-TAT---------------------------------------TTCT-ATTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--TATCCGACTGC-TTTGCTTGCTT--AATTCATTCAATTAAC----TTAC----TAAACTGGGG-G-TTT-------------------GATTG-TTGTCTAATAT----A--ATAAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTAAGCAATCCGGACT
droFic1 scf7180000454065:754935-755167 + ATAT--TTG---A---ACTTTCCTATGACT--T------------------------------------------TACTTTGGT-TATTGGCTCT-AACTTTT-TAGTT-TAA---------------------------------------T------TTGGTTTTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATTCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TGAACTTGGG-G-CTT-------------------CATAG-CGAACTAATTG----T---CAAT------------------------------------------TGTTG---------------TAAACTAGCGATGATGTACGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACT
droKik1 scf7180000302486:33296-33541 + ATAT--TTA---T---AATTTCTAAT----------------TTC-------------------------CAACTAATCTCGGT-TATTGGCTGT-AACTTTTGTTGTT-GAA---------------------------------------CCCT-CCTTGGT-TTTGGTCAAATTA-AACGC--CGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--GATTCATTCAATTAAC----CTTT----TA-ACTC--------T-------------------TACTA-CTTGCTAATAAATATATATTTAT------------------------------------------T-TCTTAAAAC---------AACACCAGCGACGATGTGCGCGAGAAGATGAAGTCCAAGTATCTCAGCAATCCGGATT
droAna3 scaffold_13337:2904484-2904742 - ATAT--TTG---T---ACTTCCTATTGACTATCTAATGAT-TTTC-------------------------CAACTAATTTCGGT-TATTGGCTGT-AGCTTTT---GTTTGAA---------------------------------------CTT--TAATGGT-TTTGGTCAAATTT-ATCGC--TGGTT-CACAGT--AATCCAAATGC-TTTGCCTGCTT--AATTCATTCACACTAA----TCAC----CAAAACACCA-A-TTT-------------TA--TCGAA-GATTGGCTAAT------A--ATGAT--------------------------------------CC--TATAT--------------TTTCGAAAGCGATGAGGTGCGCGAGAAGATGAAGTCGAAGTACCTGAGCAACCCGGACT
droBip1 scf7180000396378:211396-211646 - ATAT--TTG---CAATACTCTCTAATGCCT----ACTTAT-TTTC-------------------------AAACTAATTTTGGT-TATTGGCTGC-CACTTTT---GTTTGAA---------------------------------------CTT--TAATGGT-TTTGGGCGAACTT-TTCGC--TGGTT-CGTAGT--AATCCCGATGC-TTTGCTTGCCT-----TCATACTCACTAA----CCAC----CAAACCCCTG-G-CTT-------------------GAG-GCTCGTCTAAT------A--ATGAT--------------------------------------CT--TGTAT--------------TCCCGAAAGCGATGAGGTGCGCGAGAAGATGAAGTCCAAGTACCTCAGCAACCCGGACT
dp5 XR_group8:2959420-2959703 - CTGT--AACTTTA---ACTTTC----ACTT--TAACCCAG-CCCGTTACCGTTACCGTTACCGTTAACTTAAACTTCTTTCGGTTTATTGGCTTT-AGTT------------A---------------------------------------TT---TTCTGGT-TTTGGTCAAATTT-ATCGT--TGATTCCATAAA--GAACTTACTGC-TTTGCTTGCTT-CAAATCATTCAAATAAT----AATC--CCAA-AATGAC-------------------------------------------------------AATTGATCTCCATTCGCGGTGGAAATACTAATCTCGAATC--TCTAA--------------TCCCCAAAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAACCCCGACT
droPer2 scaffold_24:93884-94167 + CTGT--AACTTTA---ACTTTC----ACTT--TAACCCAG-CCCGTTACCGTTACCGTTACCGTTAACTTAAACTTCTTTCGGTTTATTGGCTTT-AGTT------------A---------------------------------------TT---TTCTGGT-TTTGGTCAAATTT-ATCGT--TGATTCCATAAA--GAACTTACTGC-TTTGCTTGCTT-CAAATCATTCAAATAAT----AATC--CCAA-AATGAC-------------------------------------------------------AATTGATCTCCATTCGCGGTGGAAATACTAATCTCGAATC--TCTAA--------------TCCCCAAAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAACCCCGACT
droWil2 scf2_1100000004511:10505448-10505696 + ATAT--TAT---T---ACTATCCTGTA---------------TTA-------------------------ACTCTCTTGATGATTAATTGGCTTC-CGATTTC-TATC----A---------------------------------------TG---ATTTGGT-TTTGGTCAAATTT-A-------------ATAAT--AATCA----GCTTTTGCTTGCTT--AATTCATACAAAACAA----AAAA----CAAATAAATA-A-CCCACCTGTCTCAATTTATTTCG---------------------------------------------AGAGAAATTGCTAATATGTTGTCTATG--TCG------------CTCAAACAGTGATGAAGTGCGTGAGAAGATGAAGTCAAAGTACCTCAGCAATCCGGACT
droVir3 scaffold_12758:508973-509229 - dvi_2165 ATAT--TTT---A---TTTGT--TGTGTTT-------GCT-TTTA--------ACCATAATCCATA----ATCAGAAC-CTGGTTAATTGGCCTT-AATTTCA-----T-GTA---------------------------------------TT---CTATGGT-TTTGGTTAAATTTTCCCGC--TCATC-CACAAA--TAACCAAACGC-TTTGCTTGCCC--AGTTCATACCAAAA-TTAACCGAC------------AGCC-CTT-------------------TAAAG-CTCCCT-----------------------------------------TTATTAATCTTTAATTCCTG--C--------------CTTTTACAGCGATGAGGTCCGGGAGAAGATGAAGTCCAAGTACTTGAGCAATCCGGACT
droMoj3 scaffold_6680:1595605-1595896 - ATAT--TAT---T----------TATGTTG--CTCCTAAT-CTTT--------------------A----ATATTAAC--TGGT-AATTGGCTTT-AATTTG--------GAA--AACTTCTTCATTGTTTTTATTTTATTTTATTTTTTATTT---AATTGGT-TTTGGTTAAATTTTCGCGT--TGAT----CAGTAATAACAAACTGC-TTTGCTTGCTC--AATTCATACCAGTA-T----AACC----TGAA-TAGTG-T-CAT---------G---------AGTTA-ATAAC------------------AAT----------------------TAATAATCTGTAATC--TATGATT---AATTTGGGAATTTCACAGCGATGAGGTTCGGGAGAAGATGAAGTCGAAGTACCTCAGCAATCCTGACT
droGri2 scaffold_15110:956017-956293 + ATGT--AAA---T---ATTGTTTATTATTA--TTTCTTAA-CTTG-------------------------TTGTTGTTGTTGGTTAATTGGCTTTTAACTTGT-----T---ATCCACTCAATCAATA------------------------TT-T-TTATGGT-TTTGGTCAAATTT-GCCGCTTTGATT-CATACT--AA-CCAAATGC-TTTGCTTGCTCTCAATTCATTCAAATAAC----TCAACCCTTAAACAGTTA-T-TAA-------------------GATAT-TTTATTAATAT----A------------------------------------------TAATTTACG--CA---AC------GATTAATGCAGCGATGAGGTTCGGGAGAAAATGAAGTCCAAGTATCTGAGTAATCCGGACT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATAT--ATA---A---ACTTTCTAATAACA--TACCTGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TT---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAT----ATAC----TAAACTACAG-G-TTT-------------------TATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCCAAGTATCTGAGCAATCCGGA..2713.00300300000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAGCAATCCGGACT1812.00202000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGTCCAAGTATCTGAGC..........2112.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCCAAGTATCTGAGC..........1911.00100100000000000000
..............................................................................TTTGGT-AATTGGCTCT-AACTTAT---GTT-.......................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCTGAGCAATCCGGA..1911.00101000000000000000
..........................................TTA-------------------------ACTCTAACTTTGGT-AATTGGC.........................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTATCTGAGCAATCC.....1911.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTATCTGAGCAATCCGGA..2411.00100100000000000000
......................TAATAACA--TACCTGAA-CTTA-------------------------ACTCT..........................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGAGCAATCCGGACT2011.00101000000000000000
................................................................................TGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------.............................................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................CTTTGGT-AATTGGCTCT-AACT.................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTATCTGAGCAATCCGGACT2311.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCTGAGCAATCCGGACT2111.00110000000000000000
................................................................................................................................................................................................................................................................................................................T----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATG..........................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGA............................................2511.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGAGAAGATGAAGTCCAAGTAA................2511.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCCAAGTATCTGAGCAAT.......2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTTCGCGAGAAGATGAAGTC.......................2611.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGTCCAAGTATCTGAGC..........2311.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTCCAAGTATCTGAGCAATCCGGA..2811.00100000010000000000
................................................................................TGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------T............................................................................................................................................................................................................................................................................................2811.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGAAGTCCAAGTATCTGAGCAATC......2911.00100000010000000000
droSec2
TTAT--ATA---A---ACTTTCTAATAACA--TACCTGAT-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TT---CAATGGT-TTTGGTAAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----AAAC----TAGACTACAG-G-TTT-------------------TATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................AGATGAAGTCCAAGTATCTGAGCAATCC.....2811.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGAGCAATCCGGA..1811.0010010
dm3
ATAT--AAA---A---ACTTTCTAATAACA--TACCTGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCAACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----ATAC----TGAACTAGAG-G-TTT-------------------GATTG-ATTACTAATAT----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGATGTTCGAGAGAAGATGAAGTCCAAATATCTGAGCAATCCGGACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................TAC----TGAACTAGAG-G-TTT-------------------GATTG-AT.............................................................................................................................................24110.00100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000100000000000000000000000000000000000000000100000000000002000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................TAAC----ATAC----TGAACTAGAG-G-TTT-------------------GATT.................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGTC.........................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGAT..............................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................TCT-AACTTAT---GTT-CAA---------------------------------------TT---CAATGGT-................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTTGGTCAAATTT-ATCGC--TGTTT-CATA.................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TT--AATTCATTCAAATAAC----ATAC----TGAAC...................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCAAATAAC----ATAC----TGAACTAGAG-G-TTT-------------------.....................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TAT----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGAT..............................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................TGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGATG..........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACA--TACCTGAA-CTTA-------------------------ACTCTAACTTC....................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TTTGGT-AATTGGCTCT-AACTTAT---G..........................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................TAAC----ATAC----TGAACTAGAG-G-TT.........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAATAACA--TACCTGAA-CTTA-------------------------ACTCTAACT......................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................T-CAA---------------------------------------TT---CAATGGT-TTTGGTCAAATTT-ATC...............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................ATTCATTCAAATAAC----ATAC----TGAACTAGAA-.............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTGAGCAATCCGGACT2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCCAAATATCTGAGCAATC......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGATGT.........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................ATAAC----ATAC----TGAACTAGAG-G-TTT-------------------GATTG-AT.............................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TTT-------------------GATTG-ATTACTAATAT----A--ATGA.........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAT--AAA---A---ACTTTCTAATAACA--TACC.................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGAGAGAAGATGAA..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGGT-AATTGGCTCT-AACTTAT---GTT-CAA---------------------------------------.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TAGAG-G-TTT-------------------GATTG-ATTA...........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGAGAGAAGATGAAGTC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................TAACA--TACCTGAA-CTTA-------------------------ACTCTAACTT.....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAC----TGAACTAGAG-G-TTT-------------------GATTG-ATT............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CTTTGGT-AATTGGCTCT-AACTTAT---GTT-.......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TTGGT-AATTGGCTCT-AACTTAT---GTT-C......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GAG-G-TTT-------------------GATTG-ATTACTAAT......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTA-------------------------ACTCTAACTTTGGT-AATTGGC.........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AATTGGCTCT-AACTTAT---GTT-CAA---------------------------------------TT---CAA.....................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAACA--TACCTGAA-CTTA-------------------------AC.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TTTGGT-AATTGGCTCT-AACTTAT---GTT-.......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGT..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTCTAATAACA--TACCTGAA-CTTA-------------------------AC.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................C----TGAACTAGAG-G-TTT-------------------GATTG-...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTA-------------------------ACTCTAACTTTGGT-AATTGGCTAA-.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGATGTTCGAGAGAAGATGAAGTCCAA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCTGAGCAATCCGGA..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TAAC----ATAC----TGAACTAGAG-G-TTT-------------------GA...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TAT----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGC.................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGGCTCT-AACTTAT---GTT-CAA---------------------------------------TT---CAATGGT-................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTCATTCAAATAAC----ATAC----TGAACTAGAG-G-...........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAATAACA--TACCTGAA-CTTA-------------------------ACTCTAAC.......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................T-AACTTAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGT..........................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................T----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGA............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAC----TGAACTAGAG-G-TTT-------------------GATTG-...............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................TCTAATAACA--TACCTGAA-CTTA-------------------------ACTCTA.........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TCTAACTTTGGT-AATTGGCTCT-AACT.................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGATGATGTTCGAGAGAAG...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTCGAGAGAAGATGAAGT........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................................TCAAATAAC----ATAC----TGAACTAGAG-G-...........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................AATTCATTCAAATAAC----ATAC----TGAAC...................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................AAC----ATAC----TGAACTAGAG-G-TTT-------------------GATTG-A..............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AA---------------------------------------TT---CAATGGT-TTTGGTC.........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................................................................................TTGGCTCT-AACTTAT---GTT-CAA---------------------------------------TT---CAATGG..................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TAAC----ATAC----TGAACTAGAG-G-TTT-------------------GAT..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................T-TTTGGTCAAATTT-ATCGC--TG.........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...T--AAA---A---ACTTTCTAATAACA--TACCTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAC----TGAACTAGAG-G-TTT-------------------GATTG-ATTAC..........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................TTCAAATAAC----ATAC----TGAACTAGAG-G-T..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................TAAC----ATAC----TGAACTAGAG-G-G..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TAT----A--ATGAT------------------------------------------TGTATCA-------------AAAAACAGCGATGA............................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTATCA-------------AAAAACAGCGATGATGTT........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CTTTGGT-AATTGGCTCT-AACTTAT---GT.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................CCTGAA-CTTA-------------------------ACTCTAACTTTGGT-................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TGCTT--AATTCATTCAAATAAC----AT..............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTAT---GTT-CAA---------------------------------------TT---CAATGGT-TTTGGT..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................TAATAACA--TACCTGAA-CTTA-------------------------ACTCTA.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATAT--AAA---A---ACTTTCTAATAACA--TACCT................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................TCTAACTTTGGT-AATTCT..........................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droEre2
ATAT--ATA---A---ACTTTCTAATAATA--TACCTGAA-CCTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAA---GTT-GAA---------------------------------------TC---CAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCCT--AATTCATTCAAGTAAC----TTAC----TT-ACTACAG-C-CTT-------------------AATTG-CTTGTTAATAT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................AAC----TTAC----TT-ACTACAG-C-CTT-------------------AATTG-C..............................................................................................................................................2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTTCGCGAGAAGAT.............................2011.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTTCGCGAGAAGGG.............................1920.5010001000
droYak3
ATAT--ATA---A---ACTTTCCAATAATA--TACCCGAA-CTTA-------------------------ACTCTAACTTTGGT-AATTGGCTCT-AACTTAT---GTT-GAA---------------------------------------TC---AAATGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCAACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TAAACTGCAG-G-TTT-------------------GATTG-CTTATTAATGT----A--ATGAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTTCGCGAGAAGATGAAGTCCAAGTATCTATCGAATCCGGACTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGCGAGAAGATGAAGT........................2212.00200000020000
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGTTCGCGAGAAGATGAA..........................2011.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTATCTATCGAATCCGGA..2211.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CGATGATGTTCGCGAGAAGA..............................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................TCGCGAGAAGATGAAGTC.......................1811.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTTCGCGAGAAGAT.............................1911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCGAGAAGATGAAGTCC......................2111.00101000000000
......................................................................................................................................................................................................................TGCTTGCTT--AATTCATTCAAATAAC----T...............................................................................................................................................................................................2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------TAAAACAGCGATGATGTT........................................1911.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCGCGAGAAGATGAA..........................1911.00100000010000
droEug1
ATAT--TTA---A---ACTTTCTAATCAAT--TAACTGAA-CTTT-------------------------ACTCTAATTTTGGT-TATTGGCTCT-AACTTTT---GTT-GAA---------------------------------------TTCT-CTTTGGTTTTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATACGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TAAA-TAAAG-GCTAC-------------------GACGG-ATAACTAATAA----A-----AT------------------------------------------TATAT---------------TAAAACAGCGATGATGTTCGCGAGAAAATGAAGTCCAAGTATCTGAGTAATCCGGACTSizeHit CountTotal NormTotal
No Reads
droBia1
ATAT--TTG---A---ACTTTCCAATGATT--TAACTGAA-TTTC-------------------------AGACTAATTTTGGT-TATTGGCTCT-AACTTC----GTT-GAT---------------------------------------TTCTCTTTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----CTAT----TCAACTGGGT-A-ATG-------------------TATCG-TTGACTAATGT----A--A-AAT------------------------------------------TGTGT---------------TGAAACAGCGATGATGTGCGCGAGAAAATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotal
No Reads
droTak1
ATATATTTG---A---ACTTTCTAATGATTTTTAACTGAA-TTTC-------------------------AAACTAATTTTGGT-TATTGGCTCT-AACTTTT--CGTT-GAT---------------------------------------TTCT-CCTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATATT--AATCCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----GGTC----TAAACTCCGG-T-GTT--------------T----TTTTG-GTAACTAATGT----A--AGAAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTGCGCGAAAAGATGAAATCCAAGTATCTGAGCAATCCGGATTSizeHit CountTotal NormTotal
No Reads
droEle1
ATAT--TGA---A---ACTTTCTAATGATT--CAACTGAA-TTTT-------------------------CATCTAACTTTGGT-AATTGGCTCT-AACTTTT---GTT-TGA---------------------------------------TTCC-CTTTGGT-TTTGGTCAAATTT-AAGGC--TGTTT-CATAGT--TATCCTACTGC-TTTGCTTGCTT--GATTCATTCAATTAAC----TCAC----TAAACTGGGG-G-TTC-------------------GATTG-GTTATTAATAT----A--AAATA------------------------------------------TGTAT---------------TAAAACAGCGACGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotal
No Reads
droRho1
ATAT--T-------------TCTAATGAAT--TAACTGGATTTTT-------------------------AAACTAATTTTGGT-TATTGGCTCT-AACTTTT---GTT-TAT---------------------------------------TTCT-ATTTGGT-TTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--TATCCGACTGC-TTTGCTTGCTT--AATTCATTCAATTAAC----TTAC----TAAACTGGGG-G-TTT-------------------GATTG-TTGTCTAATAT----A--ATAAT------------------------------------------TGTAT---------------TAAAACAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTAAGCAATCCGGACTSizeHit CountTotal NormTotal
No Reads
droFic1
ATAT--TTG---A---ACTTTCCTATGACT--T------------------------------------------TACTTTGGT-TATTGGCTCT-AACTTTT-TAGTT-TAA---------------------------------------T------TTGGTTTTTGGTCAAATTT-ATCGC--TGTTT-CATAGT--AATTCGACTGC-TTTGCTTGCTT--AATTCATTCAAATAAC----TTAC----TGAACTTGGG-G-CTT-------------------CATAG-CGAACTAATTG----T---CAAT------------------------------------------TGTTG---------------TAAACTAGCGATGATGTACGCGAGAAGATGAAGTCCAAGTATCTGAGCAATCCGGACTSizeHit CountTotal NormTotal
No Reads
droKik1
ATAT--TTA---T---AATTTCTAAT----------------TTC-------------------------CAACTAATCTCGGT-TATTGGCTGT-AACTTTTGTTGTT-GAA---------------------------------------CCCT-CCTTGGT-TTTGGTCAAATTA-AACGC--CGTTT-CATAGT--AATCCGACTGC-TTTGCTTGCTT--GATTCATTCAATTAAC----CTTT----TA-ACTC--------T-------------------TACTA-CTTGCTAATAAATATATATTTAT------------------------------------------T-TCTTAAAAC---------AACACCAGCGACGATGTGCGCGAGAAGATGAAGTCCAAGTATCTCAGCAATCCGGATTSizeHit CountTotal NormTotal
No Reads
droAna3
ATAT--TTG---T---ACTTCCTATTGACTATCTAATGAT-TTTC-------------------------CAACTAATTTCGGT-TATTGGCTGT-AGCTTTT---GTTTGAA---------------------------------------CTT--TAATGGT-TTTGGTCAAATTT-ATCGC--TGGTT-CACAGT--AATCCAAATGC-TTTGCCTGCTT--AATTCATTCACACTAA----TCAC----CAAAACACCA-A-TTT-------------TA--TCGAA-GATTGGCTAAT------A--ATGAT--------------------------------------CC--TATAT--------------TTTCGAAAGCGATGAGGTGCGCGAGAAGATGAAGTCGAAGTACCTGAGCAACCCGGACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTGCGCGAGAAGATGAAGTC.......................2611.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGAAGTACCTGAGCAACCC.....2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGAAGTCGAAGTACCTGA............2311.001000010
droBip1
ATAT--TTG---CAATACTCTCTAATGCCT----ACTTAT-TTTC-------------------------AAACTAATTTTGGT-TATTGGCTGC-CACTTTT---GTTTGAA---------------------------------------CTT--TAATGGT-TTTGGGCGAACTT-TTCGC--TGGTT-CGTAGT--AATCCCGATGC-TTTGCTTGCCT-----TCATACTCACTAA----CCAC----CAAACCCCTG-G-CTT-------------------GAG-GCTCGTCTAAT------A--ATGAT--------------------------------------CT--TGTAT--------------TCCCGAAAGCGATGAGGTGCGCGAGAAGATGAAGTCCAAGTACCTCAGCAACCCGGACTSizeHit CountTotal NormTotal
No Reads
dp5
CTGT--AACTTTA---ACTTTC----ACTT--TAACCCAG-CCCGTTACCGTTACCGTTACCGTTAACTTAAACTTCTTTCGGTTTATTGGCTTT-AGTT------------A---------------------------------------TT---TTCTGGT-TTTGGTCAAATTT-ATCGT--TGATTCCATAAA--GAACTTACTGC-TTTGCTTGCTT-CAAATCATTCAAATAAT----AATC--CCAA-AATGAC-------------------------------------------------------AATTGATCTCCATTCGCGGTGGAAATACTAATCTCGAATC--TCTAA--------------TCCCCAAAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAACCCCGACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTGCGCGAGAAGATGAAGT........................2511.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGTATCTGAGCAACCCCGA..2511.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTATCTGAGCAACCCCGACT2611.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTGCGCGAGAAGATGA...........................2111.0010100000000
droPer2
CTGT--AACTTTA---ACTTTC----ACTT--TAACCCAG-CCCGTTACCGTTACCGTTACCGTTAACTTAAACTTCTTTCGGTTTATTGGCTTT-AGTT------------A---------------------------------------TT---TTCTGGT-TTTGGTCAAATTT-ATCGT--TGATTCCATAAA--GAACTTACTGC-TTTGCTTGCTT-CAAATCATTCAAATAAT----AATC--CCAA-AATGAC-------------------------------------------------------AATTGATCTCCATTCGCGGTGGAAATACTAATCTCGAATC--TCTAA--------------TCCCCAAAGCGATGATGTGCGCGAGAAGATGAAGTCCAAGTATCTGAGCAACCCCGACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGTCCAAGTATCTGAGC..........2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGTATCTGAGCAACCCCGACT2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTCCAAGTATCTGAGCAACCCCGA..2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................GATGTGCGCGAGAAGATGAA..........................2011.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTGCGCGAGAAGAT.............................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTATCTGAGCAACCCCGA..2211.001100000
droWil2
ATAT--TAT---T---ACTATCCTGTA---------------TTA-------------------------ACTCTCTTGATGATTAATTGGCTTC-CGATTTC-TATC----A---------------------------------------TG---ATTTGGT-TTTGGTCAAATTT-A-------------ATAAT--AATCA----GCTTTTGCTTGCTT--AATTCATACAAAACAA----AAAA----CAAATAAATA-A-CCCACCTGTCTCAATTTATTTCG---------------------------------------------AGAGAAATTGCTAATATGTTGTCTATG--TCG------------CTCAAACAGTGATGAAGTGCGTGAGAAGATGAAGTCAAAGTACCTCAGCAATCCGGACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGTGCGTGAGAAGATGAA..........................2312.00200200
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGTGCGTGAGAAGA..............................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTACCTCAGCAATCC.....1911.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCTCAGCAATCCGGACT2011.00110000
....................................................................................................TTC-TATC----A---------------------------------------TG---ATTTGGT-TTTGGT..........................................................................................................................................................................................................................................................................2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGAGAAGATGAAG.........................1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAAGTGCGTGAGAA................................1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGTACCTCAGCAATCCGGA..2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................AGTGATGAAGTGCGTGAGAA................................2011.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTGAGAAGATGAAGT........................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................GATGAAGTGCGTGAGAAGATGAAGT........................2511.00100100
......................................................................................................C-TATC----A---------------------------------------TG---ATTTGGT-TTT.............................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTACCTCAGCAATCCGGA..2211.00100010
droVir3
ATAT--TTT---A---TTTGT--TGTGTTT-------GCT-TTTA--------ACCATAATCCATA----ATCAGAAC-CTGGTTAATTGGCCTT-AATTTCA-----T-GTA---------------------------------------TT---CTATGGT-TTTGGTTAAATTTTCCCGC--TCATC-CACAAA--TAACCAAACGC-TTTGCTTGCCC--AGTTCATACCAAAA-TTAACCGAC------------AGCC-CTT-------------------TAAAG-CTCCCT-----------------------------------------TTATTAATCTTTAATTCCTG--C--------------CTTTTACAGCGATGAGGTCCGGGAGAAGATGAAGTCCAAGTACTTGAGCAATCCGGACTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTACTTGAGCAATCCGG...2312.002002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTACTTGAGCAATCCGGA..2412.002002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCGGGAGAAGATGAAGTCCAAGTA.................2411.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGTACTTGAGCAATCCGGA..2211.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGTACTTGAGCAATCC.....2111.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACTTGAGCAATCCGGA..2011.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGATGAAGTCCAAGTACTTGAGC..........2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCAAGTACTTGAGCAATCC.....2211.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTCCAAGTACTTGAGC..........2011.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
ATAT--TAT---T----------TATGTTG--CTCCTAAT-CTTT--------------------A----ATATTAAC--TGGT-AATTGGCTTT-AATTTG--------GAA--AACTTCTTCATTGTTTTTATTTTATTTTATTTTTTATTT---AATTGGT-TTTGGTTAAATTTTCGCGT--TGAT----CAGTAATAACAAACTGC-TTTGCTTGCTC--AATTCATACCAGTA-T----AACC----TGAA-TAGTG-T-CAT---------G---------AGTTA-ATAAC------------------AAT----------------------TAATAATCTGTAATC--TATGATT---AATTTGGGAATTTCACAGCGATGAGGTTCGGGAGAAGATGAAGTCGAAGTACCTCAGCAATCCTGACTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGTTCGGGAGAAGATGA...........................2212.002100001
.....................................................................................................................................................................................................................................................................................................................................................................................................ATGAGGTTCGGGAGAAGA..............................1811.001000001
..............................................................................................................................................................................................................................C--AATTCATACCAGTA-T----AACC----TG......................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGAAGTACCTCAGCAATC......2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTACCTCAGCAATCCTGACT2511.001100000
.....................................................................................................................................ATTTTATTTTATTTTTTATT............................................................................................................................................................................................................................................................................................20200.051100000
droGri2
ATGT--AAA---T---ATTGTTTATTATTA--TTTCTTAA-CTTG-------------------------TTGTTGTTGTTGGTTAATTGGCTTTTAACTTGT-----T---ATCCACTCAATCAATA------------------------TT-T-TTATGGT-TTTGGTCAAATTT-GCCGCTTTGATT-CATACT--AA-CCAAATGC-TTTGCTTGCTCTCAATTCATTCAAATAAC----TCAACCCTTAAACAGTTA-T-TAA-------------------GATAT-TTTATTAATAT----A------------------------------------------TAATTTACG--CA---AC------GATTAATGCAGCGATGAGGTTCGGGAGAAAATGAAGTCCAAGTATCTGAGTAATCCGGACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:13 PM