ID:

dsi_14

 Coordinate:

2r:4879124-4879181 +

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.7 -40.4 -40.4

Sense Strand Reads

TGCGAGGAGAGCGGCCAGCGGCATAATGCCGGCGACAGCGAATTCATGGGTCTTGTTGCTGTTGTTGTTGGTCGCCGTGGAAAGATGCAGCAGCAACAGCAGCGGGCGCATAAATTTTCGCAGCAGCAGCAGCGGCTACAGGAAGGTCCAGTGGCAGG

***********************************..(((((...(((.((((.(((((((((((((((((((..........))).)))))))))))))))))))).))).....))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M023

head

 M025

embryo

 M024

male body		 O002

Head

 GSM343915

embryo

 SRR618934

dsim w501 ovaries

 O001

Testis

 SRR553486

Makindu_3 day-old ovaries

 M053

female body

 SRR902009

testis

 SRR553485

Chicharo_3 day-old ovaries

 SRR553487

NRT_0-2 hours eggs

 SRR553488

RT_0-2 hours eggs

 SRR902008

ovaries
.....................................................................................TGCAGCAGCAACAGCAGCGGGC................................................... 22 0 1 718.00 718 548 108 52 6 4 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCG.................................................. 23 0 1 109.00 109 43 31 7 0 17 7 0 2 2 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGTC..................................................................................... 23 0 1 104.00 104 37 54 5 2 4 1 0 1 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGG.................................................... 21 0 1 39.00 39 0 0 0 8 6 3 8 7 1 0 3 3 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCT.................................................. 23 1 1 37.00 37 33 3 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGAC................................................... 22 1 1 27.00 27 23 2 2 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGG..................................................... 20 0 2 21.00 42 0 0 0 33 0 1 6 1 1 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCG...................................................... 19 0 2 19.50 39 0 0 0 39 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGT...................................................................................... 22 0 1 13.00 13 3 3 0 0 0 1 0 0 1 4 0 0 0 1
..................................................TCTTGTTGCTGTTGTTGTTGG....................................................................................... 21 0 1 10.00 10 6 0 0 2 0 1 0 0 0 0 1 0 0 0
.......................................................................................CAGCAGCAACAGCAGCGGGC................................................... 20 0 1 6.00 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGTCT.................................................................................... 24 1 1 6.00 6 4 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................GGTCTTGTTGCTGTTGTTGTTGG....................................................................................... 23 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGT................................................... 22 1 1 5.00 5 1 1 0 0 0 2 0 0 0 0 0 0 1 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCGC................................................. 24 0 1 4.00 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGA................................................... 22 1 2 3.50 7 2 0 0 0 1 1 0 0 1 0 2 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCTT................................................. 24 2 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................CTTGTTGCTGTTGTTGTTGGTC..................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTTGTC..................................................................................... 23 1 1 3.00 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCC.................................................. 23 1 1 3.00 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGG................................................... 22 1 2 2.00 4 3 0 1 0 0 0 0 0 0 0 0 0 0 0
......................ATAATGCCGGCGACAGCGAA.................................................................................................................... 20 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................GCAGCAACAGCAGCGGGC................................................... 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCATCGGGC................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................GCAGCAGCAACAGCAGCGGGCG.................................................. 22 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGTT..................................................................................... 23 1 1 2.00 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................TCTTGTTGCTGTTGTTTTTGGTC..................................................................................... 23 1 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGAAGCGGGC................................................... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCATCAGCAACAGCAGCGGGC................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGAC..................................................................................... 23 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTG........................................................................................ 20 0 2 1.50 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTT......................................................................................... 19 0 3 1.33 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCATCAACAGCAGCGGGC................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCACCAGCAACAGCAGCGGGC................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGTCGC................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AGCAGCAACAGCAGCGGGCGCA................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.......................................GAATTCATGGGTCTTGTTGCTG................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCTGCAGCAACAGCAGCGGGC................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCATCGGGCG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGGTGTTGTTGGTC..................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGCAGCAACAGCAGCGGGC................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................GCAACAGCAGCGGGCG.................................................. 16 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGG...................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................AGCAACAGCAGCGGGCG.................................................. 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGGC..................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTATTGGTC..................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCGT................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TCCAGCAGCAACAGCAGCGGGC................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................GGTCTTGTTGCTGTTGTTGTTG........................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGTCC.................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTTTTGTTGGTC..................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TCAGCAGCAACAGCAGCGGGC................................................... 21 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCACCGGGCG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TGTTGCTGTTGTTGTTGGTC..................................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCGACAGCAGCGGGC................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGTAACAGCAGCGGGC................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCCGCGGGC................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGAAGCAGCAACAGCACCGGGC................................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TCTTTTTGCTGTTGTTGTTGGTC..................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................AGCAGCAACAGCAGCGGGC................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................TGCAGCAACAGCAGCGGGCG.................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCTA................................................. 24 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCGGCGGGCT.................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTTTTGGT...................................................................................... 22 1 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGTTGTTGTTGTTGGTC..................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTGTTGCTCTTGTTGTTGGTC..................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTTTTGG....................................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGGG.................................................. 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTTTTTGTC..................................................................................... 23 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCACCCGCCGCGGGCG.................................................. 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTTG....................................................................................... 21 1 6 0.33 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTCGTTGTTTGTC..................................................................................... 23 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGA...................................................................................... 22 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................TGCAGCTGCAAGGGCAGCGGGCG.................................................. 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAACGGGC................................................... 22 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................GGCAGCAGCAACAGCAGCGGGC................................................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGGCTAAAA.............................................. 27 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
..................................................TCTTGTTGCTGTTGTTGTTGGC...................................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................CCTTGTTGCTGTTGTTGTTGGT...................................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACATCAGCGGAC................................................... 22 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTGTTGTTGGAT..................................................................................... 23 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGT.................................................... 21 1 9 0.11 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................GCTACAGGAACGACCAG....... 17 2 13 0.08 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................TGCAGCAGCAACAGCAGCGGAT................................................... 22 2 19 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................TCTTGTTGCTGTTTTTTTTTGTC..................................................................................... 23 3 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................ATGGTCTAGTGGCAGG 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACGCTCCTCTCGCCGGTCGCCGTATTACGGCCGCTGTCGCTTAAGTACCCAGAACAACGACAACAACAACCAGCGGCACCTTTCTACGTCGTCGTTGTCGTCGCCCGCGTATTTAAAAGCGTCGTCGTCGTCGCCGATGTCCTTCCAGGTCACCGTCC

************************************..(((((...(((.((((.(((((((((((((((((((..........))).)))))))))))))))))))).))).....))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total O001

Testis

 SRR553488

RT_0-2 hours eggs

 GSM343915

embryo

 M024

male body
.........................................................................CGGCACCTTTCTACGTCGT.................................................................. 19 0 1 2.00 2 2 0 0 0
.......................ATTACGGCCGCTGTCGCTT.................................................................................................................... 19 0 1 2.00 2 2 0 0 0
...............................................................................................................................TCGTCGCCGATGGCCCTCC............ 19 2 3 0.33 1 0 0 1 0
...................ACGGATTTCGGCCGCTGTCGC...................................................................................................................... 21 3 3 0.33 1 0 1 0 0
....................................................................ACCAGCCGCACCGCTCTACG...................................................................... 20 3 6 0.17 1 0 1 0 0
.....................................CGTTTAGGTACCAAGAACAA..................................................................................................... 20 3 13 0.08 1 0 0 0 1
.....................................CGTTTAGGTACCAAGAACA...................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSim2 2r:4879074-4879231 + dsi_14 confident TGCGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTCTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATAAATTTTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGGTCCA------------------GTGGCAGG
droSec2 scaffold_1:1701951-1702108 + dse_126 confident TGCGAGGAGAGAGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTCTTGTTGCTGATGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATTTTCG---------CAGCAGCAGCAGC------AGCTACAGGAAGGTCCA------------------GTGGCAGG
dm3 chr2R:4062137-4062294 + dme_405 candidate-rescued TGTGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGATCTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGGTCCA------------------GTGGCAGG
droEre2 scaffold_4929:18572408-18572565 - der_1516 candidate TGTGAGAAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGTTTCA------------------CTGGCAGG
droYak3 2L:16712475-16712632 + dya_1790 candidate-rescued TGTGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCAACAGGAAGTTCCA------------------GTGGCAGG
droEug1 scf7180000409474:2883200-2883366 + ---GAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATTCGAATTCGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAACAGCGGAC---------CTCGCGCCAGCGGCAACGGCAGCCGCGGCATTGGATACGGGAAAATCCA------------------TCGGCAGG
droBia1 scf7180000302291:1913615-1913775 + TGCGAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CGGTGGAAAG-------------ATGCAGCAGCGATAACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCCATCGGAAAATGCA------------------GTGGCAGG
droTak1 scf7180000415088:43556-43721 - -ACAACAACAGCGGC--CAGCGGCAAAATGCCGGCGACAGTGAATT------CGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CGGTGGAAAG-------------ATGCAGCAGCAACAACAGCAGCGGTCGCATCAATAGTCG---------CAGCAGCAGCAGCAGCAGCGGCTATAGGAAAATCCA------------------GTGGCAGG
droEle1 scf7180000491240:859170-859324 + TGCGAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTTTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGTGGGCGCATCAATAGTCG---------CAGTA---GCAAC------GGCTACAGGAAAATTCA------------------GTGGCAGG
droRho1 scf7180000770177:147425-147579 + TGTGAGAAGAGCGGC--CAGCGGCAAAATGCCGGTGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTATTG---------GT------CG------------CTGTGGAGAG-------------ATGCAGCAGC---AACAGCAGTGGGCGCATCAATAG------------AAGCAGGAGCAGC------GGCTATAGGAAAACCCA------------------ATGGCAGG
droFic1 scf7180000453215:147148-147296 - TTCGTAAAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTTTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCCGCGGGCGCATCAATAGTCG---------CAGCAGCAT---------------CAGGAAAAGCCA------------------CTGGCAGG
droKik1 scf7180000302411:115804-115943 - TGTGAAGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGTC---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AGCAGCAGC---------------------------------------------------AGCAAAGAGCAGTGGCAGGAGCCGCAGTTGCAGTTGC
droAna3 scaffold_13266:1925321-1925461 - dan_4048 -GCGAGAAGAGCGGC--TTGCGGCAAGATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGGC---GTCGTCGT------CG------------CCGTAGAAAG-------------CAGCAGCATC---ATCAGCAA-----------AAAGGGC---------CAGCAGCAGCAGC------AGCAACAGGA--GTCC---------------------------
droBip1 scf7180000396730:2911822-2911954 - -GCGAGAAGAGCGGC--TTGCGGCAAGATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGGC---GTCGTCGT------CG------------CCGTGGAAAG-------------CAGCAGCAGC---ATCAGCAGC------------------------------AGCAGCATC------ACCAGCAAAAAGGGCC---------------------------
dp5 3:2044903-2045003 + -GCGTGAAGAGCAGT----GCGGCAAGATGCCGGCGACAGCTAATG------TGCGGGTGTTGTTGTTGTTGTGCTGC---GCC---GT------CG------------TTGTGGATAGCAGT-AA-----------------------------------------ATTG---------CAGGA-------------------------------------------------------GC
droPer2 scaffold_2:2217508-2217608 + dpe_2519 -GCGTGAAGAGCAGT----GCGGCAAGATGCCGGCGACAGCGAATG------TGCGGGTGTTGTTGTTGTTGTGCTGC---GCC---GT------CG------------TTGTGGATAGCAGT-AA-----------------------------------------ATTG---------CAGGA-------------------------------------------------------GC
droWil2 scf2_1100000004514:381085-381220 + ----------GCGGC--------CAAAATGCCGGCGACAGCGAATT------TGTTGGTGTTGTTGTTGCTGCTGCTT---------GTGTCCGTCGTGAGTGTTGTTGTTGTGGATAGCAAGAAAATTGTGTTGTTGCAAC---AACAGC------------AACAGCCG---------CAGCAGC-------------------------------------------------AACAGG
droVir3 scaffold_12875:9059126-9059249 + -------AGAGCAG---CAGCGGCAAAATGCCGGCGACAGCGAATT------TGTGCCTGTTGTTGTTGCTGCTCTTC---GTAGTCGC------CG------------TCGTCGCTAGCAGC-AA--------------------------------------ATCGATG---------CAGCA------------------ACAGGA--GTCC-------------GGCTCCACAGCAGG
droMoj3 scaffold_6496:18113609-18113759 - -GCAGGCAGCGCAG---TAGCGGCAAAATGCCGGCGACAGCGAATT------TGTCGTCGTTGTTGTTGTTGCTGTTTTGCGTCGTCGT------CGTCGTCGCCG---CCGTTGCTGGCAGC-AA-----------------------------------------ATCG---------AAGCAGCAGGAAC------AGCAACAGGA--GTCC-------------GGCTCCACAGCAGC
droGri2 scaffold_15245:2390645-2390784 + -GCAGGCAGCGCGGCAGCACCGGCAAAATGCCGGCGACAGCGAGTT------TGTCCATGTTGTTGTTGTTGTTGCTG---------GCTTCTATCGCAA---------TCGCCGCTAGCAGC-AA-----------------------------------------ATCG---------AAGCAGCTGCAGC------AGCAACAGGA--GTCCG------------------TCGGCTCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGCGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTCTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATAAATTTTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGGTCCA------------------GTGGCAGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGC....................................................................................221718.007185485210800600000400000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCG...................................................................................231109.0010943731200020071700000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................231104.001043755400201001400000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGG.....................................................................................21139.003900018837303600000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCT...................................................................................23137.0037330300000001000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGG......................................................................................20221.0042000163301001000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCG.......................................................................................19219.5039000003900000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................22113.001330310000001014000
..........................................................TCTTGTTGCTGTTGTTGTTG---------G..........................................................................................................................................................21110.001060000210001000000
.......................................................................................................................................CAGCAGC---AACAGCAGCGGGC....................................................................................2016.00630300000000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------CT------------.....................................................................................................................................2416.00641100000000000000
........................................................GGTCTTGTTGCTGTTGTTGTTG---------G..........................................................................................................................................................2315.00550000000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGT....................................................................................2215.00510100000012000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCGC..................................................................................2414.00400000400000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGA....................................................................................2223.50720010020001100000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCTT..................................................................................2413.00330000000000000000
...........................................................CTTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2213.00330000000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCC...................................................................................2313.00311100000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGG....................................................................................2222.00431000000000000000
........................ATAATGCCGGCGACAGCGAA......................................................................................................................................................................................................2012.00200000200000000000
.........................................................................................................................................GCAGC---AACAGCAGCGGGC....................................................................................1812.00210100000000000000
......................................................................................................................................GCAGCAGC---AACAGCAGCGGGCG...................................................................................2212.00210000000001000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------T..................................................................................................................................................2312.00210000000000001000
..........................................................TCTTGTTGCTGTTGTTGTTG---------...........................................................................................................................................................2021.50300003000000000000
..........................................................TCTTGTTGCTGTTGTTGTT.....................................................................................................................................................................1931.33400000400000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2511.00110000000000000000
........................................................................................................................................AGCAGC---AACAGCAGCGGGCGCA.................................................................................2211.00110000000000000000
.........................................GAATT------CATGGGTCTTGTTGCTG.............................................................................................................................................................................2211.00100100000000000000
............................................................................................................................................GC---AACAGCAGCGGGCG...................................................................................1611.00100000000001000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GG------...................................................................................................................................................2211.00110000000000000000
...........................................................................................................................................AGC---AACAGCAGCGGGCG...................................................................................1711.00100000000001000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCGT..................................................................................2411.00110000000000000000
........................................................GGTCTTGTTGCTGTTGTTGTTG---------...........................................................................................................................................................2211.00110000000000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------CC------------.....................................................................................................................................2411.00110000000000000000
.............................................................TGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2021.00220000000000000000
........................................................................................................................................AGCAGC---AACAGCAGCGGGC....................................................................................1911.00110000000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCTA..................................................................................2430.67220000000000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GA------...................................................................................................................................................2230.33100000000010000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GC------...................................................................................................................................................2250.20100100000000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GA------T..................................................................................................................................................2390.11100000000000001000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGT.....................................................................................2190.11100010000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGAT....................................................................................22190.05101000000000000000
droSec2
TGCGAGGAGAGAGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTCTTGTTGCTGATGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATTTTCG---------CAGCAGCAGCAGC------AGCTACAGGAAGGTCCA------------------GTGGCAGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCG...................................................................................23124.0024011112
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGG.....................................................................................2118.0081115
..........................................................TCTTGTTGCTGATGTTGTTG---------GT------...................................................................................................................................................2216.0061203
..........................................................TCTTGTTGCTGATGTTGTTG---------G..........................................................................................................................................................2114.0040112
..........................................................TCTTGTTGCTGATGTTGTTG---------GT------T..................................................................................................................................................2314.0040202
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGC....................................................................................2214.0041012
..........................................................TCTTGTTGCTGATGTTGTTG---------GT------C..................................................................................................................................................2313.0030021
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGT....................................................................................2212.0021001
..........................................................TCTTGTTGCTGATGTTGTTG---------...........................................................................................................................................................2011.0010001
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCT...................................................................................2311.0010001
...........................................................................................................................................................................................................ACAGGAAGGTCCA------------------GTGGCA..1911.0010010
.....................................................................................................................AG-------------ATGCAGCAGC---AACAGCAGCGGGC....................................................................................2511.0010010
.......................................................................................................................................................AGCGGGCGCATCAATTTTCG---------CAG...........................................................2311.0010010
...........................................................CTTGTTGCTGATGTTGTTG---------GT------CG------------CC...................................................................................................................................2511.0010010
........................................................................................................................................AGCAGC---AACAGCAGCGGGCGCA.................................................................................2211.0010010
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGG......................................................................................2030.6721010
......................................................................................................................................GCAGCAGC---AACAGCAGCGGG.....................................................................................2020.5010001
..........................................................TCTTGTTGCTGATGTTGA......................................................................................................................................................................1830.3310001
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGTA...................................................................................2350.2011000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGA.....................................................................................2170.1410100
dm3
TGTGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGATCTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGGTCCA------------------GTGGCAGGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................AGCAGC---AACAGCAGCGGGCGCA.................................................................................22119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000003000200000000000003000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000100000000000000100001000000000000000020200000000000000000000000
...........................................................CTTGTTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2418.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCG...................................................................................2318.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000020000000000000000
..........................................AATT------CATGGATCTTGTTGCTG.............................................................................................................................................................................2116.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................AGCAGC---AACAGCAGCGGGCGC..................................................................................2114.004000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................GCCGGCGACAGCGAATT------CATGGATCT.....................................................................................................................................................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
....................................................................GTTGTTGTTG---------GT------CG------------CCGTGGA..............................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000000010000
.........................................................................................................................................................................................................CTACAGGAAGGTCCA------------------GTGGCA..2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000
........................................................................................................................................AGCAGC---AACAGCAGCGGGCG...................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
..................................CGACAGCGAATT------CATGGATCT.....................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
..........................................................................GTTG---------GT------CG------------CCGTGGAAAG-------------ATG...........................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AATGCCGGCGACAGCGAATT------C.............................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTGTTGCTGTTGTTGTTG---------G..........................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100
........................ATAATGCCGGCGACAGCGAATT------C.............................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GATCTTGTTGCTGTTGTTGT......................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
........................................CGAATT------CATGGATCTTGTTGC...............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................GCATAATGCCGGCGACAGCGA.......................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGAGCGGC--CAGCGGCATAATGCCG.................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GCAGC------GGCTACAGGAAGGTCCA------------------GTGGCA..2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....AGGAGAGCGGC--CAGCGGC..........................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------CG------------CC...................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGC------GGCTACAGGAAGGTCCA------------------GTGGC...2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...........................................................CTTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TTGCTGTTGTTGTTG---------GT------CG------------CCG..................................................................................................................................2211.001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ATCTTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................GGCTACAGGAAGGTCCA------------------GTGG....2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................AACAGCAGCGGGCGCATC...............................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................ATGCAGCAGC---AACAGCAGCGG......................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................GTTGTTG---------GT------CG------------CCGTGGA..............................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATGCAGCAGC---AACAGCAGCGGG.....................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..................................CGACAGCGAATT------CATGGATCTTGT..................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................GTGGAAAG-------------ATGCAGCAGC---AACAGCA..........................................................................................2511.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTG---------GT------CG------------CCGTGGAAAG-------------ATGC..........................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AATGCCGGCGACAGCGAATT------CATGGATCT.....................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.GTGAGGAGAGCGGC--CAGCGGC..........................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................ATT------CATGGATCTTGTTGCTGT............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................GCTACAGGAAGGTCCA------------------GTGG....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........AGCGGC--CAGCGGCATAATGCC..................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGC.......................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................T------CG------------CCGTGGAAAG-------------ATGCAGCAGC---.................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................ATGGATCTTGTTGCTGTTGTT........................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CGTGGAAAG-------------ATGCAGCAGC---A................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................TTG---------GT------CG------------CCGTGGAAAG-------------ATGC..........................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACA.............................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ATGGATCTTGTTGCTGTTGTTG.......................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCA......................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGAGGAGAGCGGC--CAGCGGCA.........................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACAGCGAATT------CATGGATCTTG...................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GCTACAGGAAGGTCCA------------------GTG.....1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCA.........................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................ATGGATCTTGTTGCTGTTT..........................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................GGCATAATGCCGGCGACAGCGAATT------CATGGA........................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GACAGCGAATT------CATGGATCTTGTTGC...............................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................GCAGC------GGCTACAGGAAGGTCCA------------------GT......2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAATGCCGGCGACAGCGAATT------..............................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGG.....................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................G------------CCGTGGAAAG-------------ATGCAGCAGC---AACAG............................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTTGCTGTTGTTGTTG---------GT------CG------------.....................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGT....................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................GTTG---------GT------CG------------CCGTGGAAAG-------------..............................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................CTACAGGAAGGTCCA------------------GTG.....1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGC------GGCTACAGGAAGGTCCA------------------GTGGCA..2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................GCAGCAGC---AACAGCAGCGGGCG...................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................TGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGC.......................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................TTGCTGTTGTTGTTG---------GT------CG------------CCGTG................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CATGGATCTTGTTGCTGTTG..........................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAGCAGC------GGCTACAGGAAGGGT............................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................C------GGCTACAGGAAGGTCCA------------------G.......1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................C---AACAGCAGCGGGCGCATCAA.............................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAATGCCGGCGACAGCGAATT------CATG..........................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CCGTGGAAAG-------------ATGCAGCAGC---AA...............................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................2020.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................G-------------ATGCAGCAGC---AACAGCAGC........................................................................................2050.201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AG-------------ATGCAGCAGC---AACAGCA..........................................................................................1960.171000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTTGCTGTTGTTGTTG---------GT------CC------------.....................................................................................................................................2060.171000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AG-------------ATGCAGCAGC---AACAGC...........................................................................................1870.141000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTTGTTGCTGTTGTTGTT.....................................................................................................................................................................1980.131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGTA....................................................................................22200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................GCAGC---AACAGCAGCGGGG....................................................................................18200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
droEre2
TGTGAGAAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCTACAGGAAGTTTCA------------------CTGGCAGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCG...................................................................................2313.0030000030
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGC....................................................................................2212.0020000020
.GTGAGAAGAGCGGC--CAGCGGCATAA......................................................................................................................................................................................................................2511.0010000100
.............................................................................G---------GT------CG------------CCGTGGAAAG-------------ATGCAGCA......................................................................................................2311.0010000010
............................................................TTGTTGCTGTTGTTGTTG---------GT------CG------------.....................................................................................................................................2211.0010001000
..................AGCGGCATAATGCCGGCGACAGC.........................................................................................................................................................................................................2311.0011000000
................................................................................................G------------CCGTGGAAAG-------------ATGCAGC.......................................................................................................1811.0010000100
.....................................................................................................................AG-------------ATGCAGCAGC---AACAGCAGCGGGCGT..................................................................................2711.0010000010
............................................................TTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................2020.5010000010
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGTT...................................................................................2360.1710000010
.....................................................................................................................................TGCAGCAGC---AACAGCAGC........................................................................................18200.0511000000
droYak3
TGTGAGGAGAGCGGC--CAGCGGCATAATGCCGGCGACAGCGAATT------CATGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCAACAGGAAGTTCCA------------------GTGGCAGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGC....................................................................................2213.00330000000000
..........................................................TGTTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2312.00200200000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGCG...................................................................................2312.00200200000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2311.00100010000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------CG------------.....................................................................................................................................2211.00100100000000
.....................................................................................................................................TGCAGCAGC---AACAGCAGCGGGG....................................................................................2211.00110000000000
............................................................TTGTTGCTGTTGTTGTTG---------GT------C..................................................................................................................................................2111.00100100000000
.................................GCGACAGCGAATT------CATGGGTGT.....................................................................................................................................................................................2211.00110000000000
...........................................................GTTGTTGCTGTTGTTGTTG---------GT------CG------------C....................................................................................................................................2411.00100100000000
........................................................................................................................................AGCAGC---AACAGCAGCGGGCGC..................................................................................2111.00100100000000
..........................................................TGTTGTTGCTGTTGTTGTTG---------GT------...................................................................................................................................................2220.50100100000000
droEug1
---GAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATTCGAATTCGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAACAGCGGAC---------CTCGCGCCAGCGGCAACGGCAGCCGCGGCATTGGATACGGGAAAATCCA------------------TCGGCAGGSizeHit CountTotal NormTotal
No Reads
droBia1
TGCGAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CGGTGGAAAG-------------ATGCAGCAGCGATAACAGCAGCGGGCGCATCAATAGTCG---------CAGCAGCAGCAGC------GGCCATCGGAAAATGCA------------------GTGGCAGGSizeHit CountTotal NormTotal
No Reads
droTak1
-ACAACAACAGCGGC--CAGCGGCAAAATGCCGGCGACAGTGAATT------CGTGGGTGTTGTTGCTGTTGTTGTTG---------GT------CG------------CGGTGGAAAG-------------ATGCAGCAGCAACAACAGCAGCGGTCGCATCAATAGTCG---------CAGCAGCAGCAGCAGCAGCGGCTATAGGAAAATCCA------------------GTGGCAGGSizeHit CountTotal NormTotal
No Reads
droEle1
TGCGAGGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTTTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCAGTGGGCGCATCAATAGTCG---------CAGTA---GCAAC------GGCTACAGGAAAATTCA------------------GTGGCAGGSizeHit CountTotal NormTotal
No Reads
droRho1
TGTGAGAAGAGCGGC--CAGCGGCAAAATGCCGGTGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTATTG---------GT------CG------------CTGTGGAGAG-------------ATGCAGCAGC---AACAGCAGTGGGCGCATCAATAG------------AAGCAGGAGCAGC------GGCTATAGGAAAACCCA------------------ATGGCAGGSizeHit CountTotal NormTotal
No Reads
droFic1
TTCGTAAAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTTTTGCTGTTGTTGTTG---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AACAGCCGCGGGCGCATCAATAGTCG---------CAGCAGCAT---------------CAGGAAAAGCCA------------------CTGGCAGGSizeHit CountTotal NormTotal
No Reads
droKik1
TGTGAAGAGAGCGGC--CAGCGGCAAAATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGTC---------GT------CG------------CCGTGGAAAG-------------ATGCAGCAGC---AGCAGCAGC---------------------------------------------------AGCAAAGAGCAGTGGCAGGAGCCGCAGTTGCAGTTGCSizeHit CountTotal NormTotal
No Reads
droAna3
-GCGAGAAGAGCGGC--TTGCGGCAAGATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGGC---GTCGTCGT------CG------------CCGTAGAAAG-------------CAGCAGCATC---ATCAGCAA-----------AAAGGGC---------CAGCAGCAGCAGC------AGCAACAGGA--GTCC---------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.................................................................................GTCGTCGT------CG------------CCGTAGAAAG-------------C.............................................................................................................2111.001000001
...................................................................................................................AAAG-------------CAGCAGCATC---ATCAG............................................................................................1911.001010000
...........................................................................................................................................ATC---ATCAGCAA-----------AAAGGGC---------C.............................................................1911.001010000
...............................CGGCGACAGCGAATT------CGTG..........................................................................................................................................................................................1911.001100000
........................................................................................................................................AGCATC---ATCAGCAA-----------AAAGGGC---------C.............................................................2211.001100000
.............................................................................................................CCGTAGAAAG-------------CAGCAGCATC---ATCAGCA..........................................................................................2711.001000001
................................................................................................G------------CCGTAGAAAG-------------CAGCAGCATC---.................................................................................................2111.001010000
droBip1
-GCGAGAAGAGCGGC--TTGCGGCAAGATGCCGGCGACAGCGAATT------CGTGGGTGTTGTTGCTGTTGTTCGGC---GTCGTCGT------CG------------CCGTGGAAAG-------------CAGCAGCAGC---ATCAGCAGC------------------------------AGCAGCATC------ACCAGCAAAAAGGGCC---------------------------SizeHit CountTotal NormTotal
No Reads
dp5
-GCGTGAAGAGCAGT----GCGGCAAGATGCCGGCGACAGCTAATG------TGCGGGTGTTGTTGTTGTTGTGCTGC---GCC---GT------CG------------TTGTGGATAGCAGT-AA-----------------------------------------ATTG---------CAGGA-------------------------------------------------------GCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................GTTGTTGTGCTGC---GCC---GT------CG------------TTGTGG...............................................................................................................................2611.0010000000001
..........GCAGT----GCGGCAAGATGCCGG................................................................................................................................................................................................................2011.0010100000000
droPer2
-GCGTGAAGAGCAGT----GCGGCAAGATGCCGGCGACAGCGAATG------TGCGGGTGTTGTTGTTGTTGTGCTGC---GCC---GT------CG------------TTGTGGATAGCAGT-AA-----------------------------------------ATTG---------CAGGA-------------------------------------------------------GCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................GTTGTGCTGC---GCC---GT------CG------------TTGTG................................................................................................................................2211.001000001
.......................................................GGGTGTTGTTGTTGTTGTGCC......................................................................................................................................................................2111.001100000
.......................................................GGGTGTTGTTGTTGTTGTGCT......................................................................................................................................................................2111.001100000
droWil2
----------GCGGC--------CAAAATGCCGGCGACAGCGAATT------TGTTGGTGTTGTTGTTGCTGCTGCTT---------GTGTCCGTCGTGAGTGTTGTTGTTGTGGATAGCAAGAAAATTGTGTTGTTGCAAC---AACAGC------------AACAGCCG---------CAGCAGC-------------------------------------------------AACAGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................GCGACAGCGAATT------TGTTGGTGT.....................................................................................................................................................................................2211.00100100
...............................................................................................................GTGGATAGCAAGAAAATTGTGTTGTTGC.......................................................................................................2811.00100100
.......................CAAAATGCCGGCGACAGCGAATT------..............................................................................................................................................................................................2311.00100100
..................................................................................................................GATAGCAAGAAAATTGTGT.............................................................................................................1911.00100100
............................................TT------TGTTGGTGTTGTTGTTGCTGC.........................................................................................................................................................................2320.50100001
.............................................T------TGTTGGTGTTGTTGTTGCTGCT........................................................................................................................................................................23120.08100001
.............................................................TGTTGTTGCTGCTGCTT---------GT.........................................................................................................................................................19130.08101000
droVir3
-------AGAGCAG---CAGCGGCAAAATGCCGGCGACAGCGAATT------TGTGCCTGTTGTTGTTGCTGCTCTTC---GTAGTCGC------CG------------TCGTCGCTAGCAGC-AA--------------------------------------ATCGATG---------CAGCA------------------ACAGGA--GTCC-------------GGCTCCACAGCAGGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................TGCCTGTTGTTGTTGCTGCTCT......................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000020000000
....................................................TGTGCCTGTTGTTGTTGCTGCTCT......................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000002000000000
...................................................................................AGTCGC------CG------------TCGTCGCTAGCA.........................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000002000000000
.........................AAATGCCGGCGACAGCGAATT------..............................................................................................................................................................................................2111.0010000000001000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TCTTC---GTAGTCGC------CG------------TCGTCGCTA............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................GACAGCGAATT------TGTGCCTGTT....................................................................................................................................................................................2111.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................................................................GTAGTCGC------CG------------TCGTCGCTAGCA.........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................GC------CG------------TCGTCGCTAGCAGC-AA--------------------------------------..............................................................................2011.0010000000000000100000000000000000000000000000000000000000000000000000000000000000
.......................................................................GCTCTTC---GTAGTCGC------CG------------TCGTCGC..............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................GAATT------TGTGCCTGTTGTT.................................................................................................................................................................................1811.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................A--------------------------------------ATCGATG---------CAGCA------------------ACAGGA--GTCC-------------GGCT..........2711.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................CTGTTGTTGTTGCTGCTCTTC---.................................................................................................................................................................2120.5010000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................TGTGCCTGTTGTTGTTGC............................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000100000
droMoj3
-GCAGGCAGCGCAG---TAGCGGCAAAATGCCGGCGACAGCGAATT------TGTCGTCGTTGTTGTTGTTGCTGTTTTGCGTCGTCGT------CGTCGTCGCCG---CCGTTGCTGGCAGC-AA-----------------------------------------ATCG---------AAGCAGCAGGAAC------AGCAACAGGA--GTCC-------------GGCTCCACAGCAGCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................................................................GC-AA-----------------------------------------ATCG---------AAGCAGCAGG....................................................1811.001001000
.GCAGGCAGCGCAG---TAGCGGCAAA.......................................................................................................................................................................................................................2311.001000001
droGri2
-GCAGGCAGCGCGGCAGCACCGGCAAAATGCCGGCGACAGCGAGTT------TGTCCATGTTGTTGTTGTTGTTGCTG---------GCTTCTATCGCAA---------TCGCCGCTAGCAGC-AA-----------------------------------------ATCG---------AAGCAGCTGCAGC------AGCAACAGGA--GTCCG------------------TCGGCTCCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................A---------TCGCCGCTAGCAGC-AA-----------------------------------------ATCG---------..............................................................2111.00110
.......................................GCGAGTT------TGTCCATGTTGTTGTTGTTG..........................................................................................................................................................................2711.00110
......................................................................................................................................................................................GCAGCTGCAGC------AGCAACAGGA--...............................2120.50110
.........................................................ATGTTGTTGTTGTTGTTGC......................................................................................................................................................................19200.05101

Generated: 10/20/2015 at 10:22 PM