ID:

dsi_13936

 Coordinate:

3l:8527441-8527590 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.1 -11.0 -10.9

Flybase annnotation

CDS [3l_8527591_8527713_-]; exon [3l_8527591_8527975_-]; intron [3l_8526960_8527590_-]

No Repeatable elements found

mature
star
  1. dsi_13936  3l:8527534-8527548 -
  2. 3r:11704598-11704612 -

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGATCGTCCCGTTCCGTCTCATCTCGGAATTCGAATTCGAAATTGGAAGCGGACCGGTATCGGTTAAGAAATCGGCATCGCATTTGGAGCCCGTTTCACCAAATCCCCAAAGACGTTGGAATTCCGACCAGGGAATAGGAATACGAAATGCGTGTGCGCCAAATTTTCTTCAAAATCTACGAGAATTTCTCTTTCT
********************************************************************************************..........((((.(((((.((......)).)))))..))))......************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 M024
male body		 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
.....................AGGACCTGAGCTCGCTCTCCCGCT............................................................................................................................................................................................................. 24 0 1 5.00 5 2 3 0 0 0 0 0 0 0
.....................AGGACCTGAGCTCGCTCTCC................................................................................................................................................................................................................. 20 0 1 3.00 3 0 3 0 0 0 0 0 0 0
.................ATCCAGGACCTGAGCTCGCTCTCCCGC.............................................................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0
......ACATCGAGTACATCCAGGACCTG............................................................................................................................................................................................................................. 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.................ATCCAGGACCTGAGCTCGCTCTCCCGCT............................................................................................................................................................................................................. 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0
....................CAGGACCTGAGCTCGCTCTCC................................................................................................................................................................................................................. 21 0 1 3.00 3 1 1 1 0 0 0 0 0 0
..........CGAGTACATCCAGGACCT.............................................................................................................................................................................................................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0
....GAACATCGAGTACATCCAGGAC................................................................................................................................................................................................................................ 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0
..........CGAGTACATCCAGGACCTG............................................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...............ACATCCAGGACCTGAGCTCGCT..................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..................TCCAGGACCTGAGCTCGCTCT................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........ATCGAGTACATCCAGGACCTG............................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................CATCCAGGACCTGAGCTCGCTCTCCCGC.............................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....GAACATCGAGTACATCCAGGACCT.............................................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................CATCCAGGACCTGAGCTCGCT..................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
....................CAGGACCTGAGCTCGCTCTCCC................................................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................CGCTCTCCCGCTTGGAGGAC..................................................................................................................................................................................................... 20 2 2 1.50 3 3 0 0 0 0 0 0 0 0
.............GTACATCCAGGACCTGAGCT......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................ATCCAGGACCTGAGCTCGCTCT................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................GAGCTCGCTCTCCCGCTTGGAG........................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........TCGAGTACATCCAGGACCTGAGCTCGCC..................................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................TCCAGGACCTGAGCTCGCTCTCCCGCT............................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................CCAGGACCTGAGCTCGCTCTCCC................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................CATCCAGGACCTGAGCTCGCTCTCC................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........CGAGTACATCCAGGACCTGAGCTCGCT..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................CAGGACCTGAGCTCGCTCT................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................ATCCAGGACCTGAGCTCGCT..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................AGCTCGCTCCCCAGCTTGGATGT...................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................AGGACCTGAGCTCGCTCTCCC................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................CATCCAGGACCCGAGCTCGCTCTCC................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........TCGAGTACATCCAGGACCTGAGCTC........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................CAGGACCTGAGCTCGCTCTCCCGC.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............AGTACATCCAGGACCTGAGCTCGCT..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......CATCGAGTACATCCAGGACCTG............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............ACATCCAGGACCTGAGCTC........................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................GTTAAGAAATCGGCATCGCATTTGG............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........ATCGAGTACATCCAGGACCTGAGCTC........................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........TCGAGTACATCCAGGACCTG............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................AGGACCTGAGCTCGCTCTCCCGCG............................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................GAAATTGGAAGCGGA............................................................................................................................................... 15 0 2 0.50 1 0 0 0 0 0 1 0 0 0
....................................................................CGTCTGATCTCGGAA....................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 0 0 0 1 0 0
............................................................................................GCAATTGGTAGCGCACCGGT.......................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 1 0 0 0
...................................................................................................................GGTTAAGAACTCGGC........................................................................................................................ 15 1 4 0.25 1 0 0 0 0 0 0 0 1 0
..............TAGATCGAGGACTTGAGCT......................................................................................................................................................................................................................... 19 3 17 0.06 1 0 0 0 0 0 0 0 0 1
...........................................................................................CGAAACTGAACGCGGACCG............................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................................................................................................................................AGACACGTTGGAATTCCC...................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0
...................................................................TCGTCTGATCTCGGAA....................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0
..................................................GTATGGAGCGTCCCG......................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................AATACGAAATGCGTT.......................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0 0
....................................................................CGTCTGATCTCGGAAG...................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

TACACTTGTAGCTCATGTAGGTCCTGGACTCGAGCGAGAGGGCGAACCTCCATTCCTAGCAGGGCAAGGCAGAGTAGAGCCTTAAGCTTAAGCTTTAACCTTCGCCTGGCCATAGCCAATTCTTTAGCCGTAGCGTAAACCTCGGGCAAAGTGGTTTAGGGGTTTCTGCAACCTTAAGGCTGGTCCCTTATCCTTATGCTTTACGCACACGCGGTTTAAAAGAAGTTTTAGATGCTCTTAAAGAGAAAGA
*************************************************************************************************************..........((((.(((((.((......)).)))))..))))......******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
.......................................................................................................................................TAAACCTCGGGCAAATTGGTTTA............................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0 0 0
...............................................................................................................................................................................AAGGCTGGTGCCTTAT........................................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0
......................................................................................................CGGCTGGCCATAGCCA.................................................................................................................................... 16 1 2 0.50 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................TTTAGCGGTGTCTGCTACCTTA.......................................................................... 22 3 7 0.43 3 0 3 0 0 0 0 0 0
................................................TCCATTCCAAGCAGCGCAACG..................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................AGAAGTTATAGATGC............... 15 1 4 0.25 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................TTTAGCGGTGTCTGCTACCTT........................................................................... 21 3 10 0.20 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................AGGCTGGTGCCTTATTCAT....................................................... 19 3 7 0.14 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................TTTTGGGGTGTCTGCTACCTTA.......................................................................... 22 3 7 0.14 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................TTTTGCGGTTTCTGCTACCTTA.......................................................................... 22 3 9 0.11 1 0 1 0 0 0 0 0 0
.................................................CCATTACTAGCAAGGCAG....................................................................................................................................................................................... 18 3 20 0.10 2 0 0 2 0 0 0 0 0
..................................................................................................................................................................................................................GCGGTTTATAAGAGGTTTT..................... 19 2 11 0.09 1 0 0 0 0 0 0 1 0
.......................................................................................................GGCTGGCCATAGCCAG................................................................................................................................... 16 2 15 0.07 1 0 0 1 0 0 0 0 0
..........................................................................................AGCTTCAACCTTGGCCTGC............................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 0 0 0 1
..........................................................................................AGCTTCAACCTGCGCCTGC............................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 1
................................................TCCATTCCAAGAAGTGCA........................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 0 1 0
......TGTAGCTGATGTAAGTCCTC................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0 0 0 0 0
.....TGGTAGCTGATGTAAGTCC.................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8527391-8527640 - dsi_13936 ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------TCCGT----------CT---C---ATC----TCGGAATTCGAATTCGAAATTGGAAGCGGACCGGTATCGGT------TAAGAAATCGGCATCGCATTTGG-------------AGCCCGTT-TCACCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTTTCT
droSec2 scaffold_0:1015387-1015635 - ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------TCCGT----------CT---C---ATC----TCG-GAATCGAATTCGAAATTGGAAGCGGACCGGTATCGGT------TAAGAAATCGTCATCGCATTTGG-------------AGCTCGTT-TCACCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--TCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTCTCT
dm3 chr3L:8737866-8738112 - ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCCC-------------------------------------GTCCCGC---------------TCCGT----------CT---CGGAATC----TCG-AATTCGAATTCGTAATTGGAAGCGGACCGGTATCGTT------TAAGAAATCGGCATCGTATTGGG-----------------------CACCAAATCCCCAAAAAGACGTTGGAATTCCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTCTCT
droEre2 scaffold_4784:5304799-5305065 + ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCCC-------------------------------------GTCTCGT---------------CTCGCCTC-----GCCT---CGGAATCGTAATCG-GAATCGAACTCGAAGTGGGAAGCGGACCGGTATCGGTATCGGCTGAGAAATCGGCATCGGATTA-G-------------AGCCCGAT-TCCCCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--CCAGGCA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------T-T---------CTTCAATATCTACGAGAATT------------TCTCTCTCT
droYak3 3L:3172269-3172505 + ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------CCCGT----------CT---CGGAATCGAG-------ATCGCAATCGAAATTGGATGCGGATTGG-------------------ATCGGCATCGGATTA-G-------------AGCCCGAAATCCCAAAATCCCCAAA-AGACGTTGGAATTTCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------T-T---------CTTCAAAATCTACGAGAATT------------TCTCTCTCT
droRho1 scf7180000757774:545-738 - ATGTGAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCGC---------------------------------------ACCGGATCGCATCGGATTGGATCGTTTC--------------------------------------------------GGA------------------------TCGGGATCGT-------GATCGGTCTTGGA----------ATCAAGTCGCTAAAA---------AATTCCT--------------------------------------------------------A--TCAGGCAAATA-----------------------------------------C----GA--ACGAAATGCGTGTGCGCCAAA---------------------------------------------TCTACGAGAATT------------TCTCTCTCT
droKik1 scf7180000302474:227992-228161 + ATGTCAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGGATCCC----------------------------CTGCGGATGGTCCC-------------------------------------------------------------------------------------------------------------------------------------------------------CTGAA-GATCCGCGGA---CCA--------------------------------------------------------ATGCCAGGGA-TTA-----------------------------------AA-ATCG----AAAATCGAAATGCGTGTGCGCCGAAT------------------------T-T---------CTATTAAATCTACGAGAATT------------CCTCTCTCT
droAna3 scaffold_13337:7902756-7902928 + ACGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-T-----------------------------ATCGGATG--------------------------TTTCAAGGA-----------------------TTTCCAACT--------------------------------------------------------CGA------------------------------------------TCGATTTTCA--------------------------------------------------------A--ACTTGCA-ATA-----------------------------------AA-TTTC----AAAACCAGAATGCGTGTGCGCCAAATTCTACAAGAATCGACTCTCG-----------------------------------T------------TCTCTTTAA
droBip1 scf7180000396541:59253-59435 + ATGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-C-----------------------------ATCGGATA------------------------TATTTCAAGGA------------TA----TTT-CAATCCAATC--------------------------------------------------------CGA--------------------------------------TCGA----TTGGGA--------------------------------------------------------A--ACT-------------------------TTTA---------AATGAAA-TTTA----AAAAACAGAATGCGTGTGCGCCAAATTCTACAAGAATCGGCTATCG-----------------------------------T------------TCTCTTCAA
dp5 XR_group8:8851329-8851565 + dps_3394 ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AA------------------------CGTCAACGGACAGTCCGGT---------------TC---------------AGG--------------------------------------------------------------------------------C-CACCCATCT----------------CTAACCCCCAAA-AATCGAAGGAATCTCA--------------------------------------------------------A--CGAGAAA-ATA----------A--AA--AAAA---------AAAGAAAAACCAAAAAATAATCAAAATGCGTGTGCGCCAAAT------------------------TTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCT
droPer2 scaffold_50:354841-355076 - ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AA------------------------CGTCAACGGACAGTCCGGT---------------TC---------------AGG--------------------------------------------------------------------------------C-CACCCATCT----------------CTAACCCCCAAA-AATCGAAGGAATCTCA--------------------------------------------------------A--CGAGAAA-AAA-------------AA--AAAA---------AAAGAAAAACCAAAAAATAATCAAAATGCGTGTGCGCCAAAT------------------------TTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCT
droWil2 scf2_1100000004511:8118092-8118367 + dwi_650 ATGTTAACATCGAATATATTCAGGATCTGAGCTCTCTTTCCCGCTTGGAGGTAAGAA-GAAGATGATCATGATGATGATGATGATGATGATGATGAATGGATCG-------------------------------------C---AAC----ACAAAATGCT-----------GGATGCAAAATGG----------------------------------------------------------------------AAAAA---------ACTTTGTATTTTGTGTAAACCCGCTAACTCCTCACCATCCCTTCCTCTAATTCGATAAAGAAAATTTCAAGAA-AAACGAACAACCAAAAGATTGAAAAGCAAAGTTAAAGAAAAGCCAAAGAAAAACCGAAATGT-TGTGCG-----------------------------------------------------------------------------------
droVir3 scaffold_13049:6401531-6401589 - ATGTGAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4721468-4721527 - ATGTGAACATCGAATACATTACCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15072:203686-203894 - ATGTGAACATCGAATACATCGCCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCAAA-------------------------------------CAAAGA---------------CT--------------------------------------------------GGATACG------------------------------------------CCC------------------------------GCGAT-AATAAAAAAA---AAA--------------------------------------------------------A--CGAAAAA-AAA-------------AACTAAAA---------AAAGAAACTCGAAAAAC-------------------------TCTACAAAAGAAAAGTGACGAAATCTTAGCAAAAGTATCTGAAAGCTGCGAGCAGCAAATGTTTAAA--ATCCAACG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------TCCGT----------CT---C---ATC----TCGGAATTCGAATTCGAAATTGGAAGCGGACCGGTATCGGT------TAAGAAATCGGCATCGCATTTGG-------------AGCCCGTT-TCACCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTTTCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................AGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00530200000000000000
.....................AGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300300000000000000
......ACATCGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300300000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.00310200000000000000
....................CAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00311100000000000000
..........CGAGTACATCCAGGACCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300300000000000000
....GAACATCGAGTACATCCAGGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300000000000000
..........CGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
...............ACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
..................TCCAGGACCTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
........ATCGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
................CATCCAGGACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200200000000000000
....GAACATCGAGTACATCCAGGACCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000000000
................CATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
....................CAGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.................................CGCTCTCCCGCTTGGAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50300300000000000000
.............GTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.................ATCCAGGACCTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
............................GAGCTCGCTCTCCCGCTTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.........TCGAGTACATCCAGGACCTGAGCTCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..................TCCAGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...................CCAGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................CATCCAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..........CGAGTACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
....................CAGGACCTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................ATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.....................AGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.........TCGAGTACATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
....................CAGGACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
............AGTACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.......CATCGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...............ACATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................................GT------TAAGAAATCGGCATCGCATTTGG-------------.....................................................................................................................................................................................................................................................................2511.00100100000000000000
........ATCGAGTACATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.........TCGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.....................AGGACCTGAGCTCGCTCTCCCGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.......................................................................................................................................................................GAAATTGGAAGCGGA..........................................................................................................................................................................................................................................................................................................................1520.50100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AATACGAAATGCGTT.......................................................................................15200.05100000000001000000
droSec2
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------TCCGT----------CT---C---ATC----TCG-GAATCGAATTCGAAATTGGAAGCGGACCGGTATCGGT------TAAGAAATCGTCATCGCATTTGG-------------AGCTCGTT-TCACCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--TCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTCTCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............GTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.............GTACATCCAGGACCTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................ATCCAGGACCTGAGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..........CGAGTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCCC-------------------------------------GTCCCGC---------------TCCGT----------CT---CGGAATC----TCG-AATTCGAATTCGTAATTGGAAGCGGACCGGTATCGTT------TAAGAAATCGGCATCGTATTGGG-----------------------CACCAAATCCCCAAAAAGACGTTGGAATTCCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------TTT---------CTTCAAAATCTACGAGAATT------------TCTCTCTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............GTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........TCGAGTACATCCAGGACCTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACATCCAGGACCTGAGCTCGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TCCAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGCTCGCTCTCCCGCTTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGTACATCCAGGACCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................A--CCAGGGA-ATA-----------------------------------------G----GAATACGA...............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........CGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCG-AATTCGAATTCGTAAT....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCTGAGCTCGCTCTCCCGCTTGGAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATCCAGGACCTGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACATCCAGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............GTACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCGAGTACATCCAGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATCGAGTACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGCTCTCCCGCTTGGAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCCC-------------------------------------GTCTCGT---------------CTCGCCTC-----GCCT---CGGAATCGTAATCG-GAATCGAACTCGAAGTGGGAAGCGGACCGGTATCGGTATCGGCTGAGAAATCGGCATCGGATTA-G-------------AGCCCGAT-TCCCCAAATCCCCAAA--GACGTTGGAATTCCG--------------------------------------------------------A--CCAGGCA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------T-T---------CTTCAATATCTACGAGAATT------------TCTCTCTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............GTACATCCAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0021000100
.............GTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021000010
.............GTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000110
.......................GACCTGAGCTCGCTCTCCCGCTTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000
.............................AGCTCGCTCTCCCGCTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.......................GACCTGAGCTCGCTCTCCCGCTTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...................CCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
..........CGAGTACATCCAGGACCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...................................................................................................................................................................ACTCGAAGTGGGAAGCGGAC.........................................................................................................................................................................................................................................................................................................................2011.0010000100
droYak3
ATGTGAACATCGAGTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC---------------------------------------GTCCCGT---------------CCCGT----------CT---CGGAATCGAG-------ATCGCAATCGAAATTGGATGCGGATTGG-------------------ATCGGCATCGGATTA-G-------------AGCCCGAAATCCCAAAATCCCCAAA-AGACGTTGGAATTTCG--------------------------------------------------------A--CCAGGGA-ATA-----------------------------------------G----GAATACGAAATGCGTGTGCGCCAAAT------------------------T-T---------CTTCAAAATCTACGAGAATT------------TCTCTCTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............GTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200100010000
.............................AGCTCGCTCTCCCGCTTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....AACATCGAGTACATCCAGGACCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...................CCAGGACCTGAGCTCGCTCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
................CATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..................TCCAGGACCTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.............GTACATCCAGGACCTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
droRho1
ATGTGAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCGC---------------------------------------ACCGGATCGCATCGGATTGGATCGTTTC--------------------------------------------------GGA------------------------TCGGGATCGT-------GATCGGTCTTGGA----------ATCAAGTCGCTAAAA---------AATTCCT--------------------------------------------------------A--TCAGGCAAATA-----------------------------------------C----GA--ACGAAATGCGTGTGCGCCAAA---------------------------------------------TCTACGAGAATT------------TCTCTCTCTSizeHit CountTotal NormTotal
No Reads
droKik1
ATGTCAACATCGAATACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAAGGGATCCC----------------------------CTGCGGATGGTCCC-------------------------------------------------------------------------------------------------------------------------------------------------------CTGAA-GATCCGCGGA---CCA--------------------------------------------------------ATGCCAGGGA-TTA-----------------------------------AA-ATCG----AAAATCGAAATGCGTGTGCGCCGAAT------------------------T-T---------CTATTAAATCTACGAGAATT------------CCTCTCTCTSizeHit CountTotal NormTotal
No Reads
droAna3
ACGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-T-----------------------------ATCGGATG--------------------------TTTCAAGGA-----------------------TTTCCAACT--------------------------------------------------------CGA------------------------------------------TCGATTTTCA--------------------------------------------------------A--ACTTGCA-ATA-----------------------------------AA-TTTC----AAAACCAGAATGCGTGTGCGCCAAATTCTACAAGAATCGACTCTCG-----------------------------------T------------TCTCTTTAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GGACCTGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
...........GACTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
..............TACATCCAGGACCTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...............ACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
............ACTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................ATCCAGGACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......AATCGACTACATCCAGGACCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............TACATCCAGGACCTGAGCTCGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................TCCAGGACCTGAGCTCGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.............CTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................TCCAGGACCTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............ACATCCAGGACCTGAGCTCGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
........ATCGACTACATCCAGGACCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..GTCCAAATCGACTACATCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........CGACTACATCCAGGACCTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............TACATCCAGGACCTGAGCTCGCTCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
........ATCGACTACATCCAGGACCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droBip1
ATGTCCAAATCGACTACATCCAGGACCTGAGCTCGCTCTCCCGCTTGGAGGTAATAGATC-C-----------------------------ATCGGATA------------------------TATTTCAAGGA------------TA----TTT-CAATCCAATC--------------------------------------------------------CGA--------------------------------------TCGA----TTGGGA--------------------------------------------------------A--ACT-------------------------TTTA---------AATGAAA-TTTA----AAAAACAGAATGCGTGTGCGCCAAATTCTACAAGAATCGGCTATCG-----------------------------------T------------TCTCTTCAASizeHit CountTotal NormTotal
No Reads
dp5
ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AA------------------------CGTCAACGGACAGTCCGGT---------------TC---------------AGG--------------------------------------------------------------------------------C-CACCCATCT----------------CTAACCCCCAAA-AATCGAAGGAATCTCA--------------------------------------------------------A--CGAGAAA-ATA----------A--AA--AAAA---------AAAGAAAAACCAAAAAATAATCAAAATGCGTGTGCGCCAAAT------------------------TTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............AATACATCCAGGACTTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
............AATACATCCAGGACTTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010001000000
..................TCCAGGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
ATGTCAACATCGAATACATCCAGGACTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.............................................................................................................................................................................................................................C-CACCCATCT----------------CTAACCCCCAA.............................................................................................................................................................................................................................................2111.0010100000000
...........GAATACATCCAGGACTTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
.......CATCGAATACATCCAGGACTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............ATACATCCAGGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................GACTTGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................AAA-ATA----------A--AA--AAAA---------AAAGAAG................................................................................................................20200.0510100000000
droPer2
ATGTCAACATCGAATACATCCAGGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGAGACC-AA------------------------CGTCAACGGACAGTCCGGT---------------TC---------------AGG--------------------------------------------------------------------------------C-CACCCATCT----------------CTAACCCCCAAA-AATCGAAGGAATCTCA--------------------------------------------------------A--CGAGAAA-AAA-------------AA--AAAA---------AAAGAAAAACCAAAAAATAATCAAAATGCGTGTGCGCCAAAT------------------------TTTTTTTTATTTTTTTTAAACCCACGAGAATTTTTTTTTTGCTCTCTCTCTCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........CGAATACATCCAGGACTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
.............ATACATCCAGGACTTGAGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.....AACATCGAATACATCCAGGACTTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.003300000
..........CGAATACATCCAGGACTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.............ATACATCCAGGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
........ATCGAATACATCCAGGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
...............ACATCCAGGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.............ATACATCCAGGACTTGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................ATCCAGGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.........................CTTGAGCTCGCTCTCCCGCTTGGAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............ATACATCCAGGACTTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................CCAGGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........CGAATACATCCAGGACTTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................CAGGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
...........GAATACATCCAGGACTTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..GTCAACATCGAATACATCCAGGACTTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........GAATACATCCAGGACTTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............ATACATCCAGGACTTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........CGAATACATCCAGGACTTGAGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................TCCAGGACTTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................AGGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droWil2
ATGTTAACATCGAATATATTCAGGATCTGAGCTCTCTTTCCCGCTTGGAGGTAAGAA-GAAGATGATCATGATGATGATGATGATGATGATGATGAATGGATCG-------------------------------------C---AAC----ACAAAATGCT-----------GGATGCAAAATGG----------------------------------------------------------------------AAAAA---------ACTTTGTATTTTGTGTAAACCCGCTAACTCCTCACCATCCCTTCCTCTAATTCGATAAAGAAAATTTCAAGAA-AAACGAACAACCAAAAGATTGAAAAGCAAAGTTAAAGAAAAGCCAAAGAAAAACCGAAATGT-TGTGCG-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................TCAGGATCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00660000
.................ATTCAGGATCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.00660000
.....................AGGATCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00440000
...............ATATTCAGGATCTGAGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
..........CGAATATATTCAGGATCTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00210100
................................................................................................................................................................................................................................................................................................................................................................AACCAAAAGATTGAAAAGC.............................................................................................................................1911.00100010
...................TCAGGATCTGAGCTCTCTTTCCCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
...............ATATTCAGGATCTGAGCTCTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.....................AGGATCTGAGCTCTCTTTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
....................CAGGATCTGAGCTCTCTTTCCCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
..............TATATTCAGGATCTGAGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
........................ATCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
............AATATATTCAGGATCTGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................CAGGATCTGAGCTCTCTTTCCCGCTTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
...................TCAGGATCTGAGCTCTCTTTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................ATTCAGGATCTGAGCTCTCTTTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.................ATTCAGGATCTGAGCTCTCTTTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
..................TTCAGGATCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
..................................................................................GATGATGATGATGAATGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................TCTGAGCTCTCTTTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..........................................................................ATGATGATGATGATGATGAT..................................................................................................................................................................................................................................................................................................................................................................................................................20200.6513000130
...................................CTTTCCCGCTTGGAGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.29220000
...............................................................................GATGATGATGATGATGAATG.............................................................................................................................................................................................................................................................................................................................................................................................................2090.22200020
.........................................................................GATGATGATGATGATGATGAT..................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
................................................................................ATGATGATGATGATGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
...................................................................CATGATGATGATGATGATGATGA......................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100
........................................................................TGATGATGATGATGATGATGATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
droVir3
ATGTGAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................TTGAGCTCGCTCTCCCGCTTGGAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002000000000200000000000000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
......................TGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...........................TGAGCTCGCTCTCCCGCTTGGAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
......................TGACTTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
........ATCGAATACATTACTGACTTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..............TACATTACTGACTTGAGCTCGCTCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
.....................CTGACTTGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.................ATTACTGACTTGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
...........................TGAGCTCGCTCTCCCGCTTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
ATGTGAACATCGAATACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.......................GACTTGAGCTCGCTCTCCCGCTTGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
..................TTACTGACTTGAGCTCGCTCTCCCGCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
.......................GACTTGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................ATTACTGACTTGAGCTCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
........ATCGAATACATTACTGACTTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....GAACATCGAATACATTACTGACTTGAGCTCGCTCTCCCGCTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................4411.001000000000000000000000000000000000000000000000000000000001000000
..........CGAATACATTACTGACTTGAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...................TACTGACTTGAGCTCGCTCTCCCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............ACATTACTGACTTGAGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.................................CGCTCTCCCGCTTGGAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
............................GAGCTCGCTCTCCCGCTTGGAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
droMoj3
ATGTGAACATCGAATACATTACCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................GAGCTCGCTCTCCCGCTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................TACCGACATGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..GTGAACATCGAATACATTACCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................CCGACATGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
ATGTGAACATCGAATACATTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................CCGACATGAGCTCGCTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................ATGAGCTCGCTCTCCCGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
........ATCGAATACATTACCGACAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................TACCGACATGAGCTCGCTCTCCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
...............ACATTACCGACATGAGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............AATACATTACCGACATGAGCTCGCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.......CATCGAATACATTACCGACAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
ATGTGAACATCGAATACATCGCCGACATGAGCTCGCTCTCCCGCTTGGAGGTAAGGA-TCAAA-------------------------------------CAAAGA---------------CT--------------------------------------------------GGATACG------------------------------------------CCC------------------------------GCGAT-AATAAAAAAA---AAA--------------------------------------------------------A--CGAAAAA-AAA-------------AACTAAAA---------AAAGAAACTCGAAAAAC-------------------------TCTACAAAAGAAAAGTGACGAAATCTTAGCAAAAGTATCTGAAAGCTGCGAGCAGCAAATGTTTAAA--ATCCAACGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 08:56 AM