dsi_13927

exon [2r_3457656_3457947_-]; five_prime_UTR [2r_3457656_3457947_-]; intron [2r_3456215_3457655_-]

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GGGGCGCAGTAGATGGTGCTGGACTAGTTTGGATCGAGATTAACGAAAACGTAATGCCAAGTGGGCTTTATGAGGCCAAAATAGGTTATAATGTAAAGTAGTTAACATAATTTATCATTTTGAATTTTCGTTTGCTACTTTGTAACTTCAAATTTGTGCAATCTGCCGATTCGAGGGCTAGACATTAGCTTATCGCATCGCAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGCAGCCA *****************************************************....((.((((.....(((..((((((.(((....((((..........)))).....)))))))))..)))..)))).))****************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	O002 Head	M025 embryo	M053 female body	SRR618934 dsim w501 ovaries	SRR553488 RT_0-2 hours eggs
........GTAGATGGTGCTGGACTA................................................................................................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0
..............................................................................................................TTTATCATTTTGAATTTTCGTTTGCT..................................................................................................................	26	0	1	1.00	1	1	0	0	0	0	0
.......................................................GCCAAGTGGGCTTTATGAG................................................................................................................................................................................	19	0	1	1.00	1	0	1	0	0	0	0
........GTAGATGGTGCTGGACTAGTTTG...........................................................................................................................................................................................................................	23	0	1	1.00	1	0	0	0	1	0	0
...............................................................................................................................................................................................ATCGCATCGCAACGAATAA........................................	19	0	1	1.00	1	0	1	0	0	0	0
........GTAGATGGTGCTGGACTAG...............................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0	0
............................................................................................................AATTTATCATTTTGAATTTTCGTTTGCT..................................................................................................................	28	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................ATTTATCATTTTGAATTTTCGTTTGCT..................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................AGGGCTGGACACTAGCTT...........................................................	18	2	2	0.50	1	0	0	0	0	1	0
..............................................................................................................................................................................................................ATAGAACCATGTTCTGC...........................	17	2	12	0.08	1	0	0	0	0	0	1
...................................................................................................................................................................................................CATCGCTACGGATAAAAGC....................................	19	3	14	0.07	1	1	0	0	0	0	0

CCCCGCGTCATCTACCACGACCTGATCAAACCTAGCTCTAATTGCTTTTGCATTACGGTTCACCCGAAATACTCCGGTTTTATCCAATATTACATTTCATCAATTGTATTAAATAGTAAAACTTAAAAGCAAACGATGAAACATTGAAGTTTAAACACGTTAGACGGCTAAGCTCCCGATCTGTAATCGAATAGCGTAGCGTTGCTTATTTTGGTAAAAGACGGTTAATATAACATTTCTATCCGTCGGT ****************************************************************************************************************....((.((((.....(((..((((((.(((....((((..........)))).....)))))))))..)))..)))).))*****************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	M023 head	GSM343915 embryo	SRR618934 dsim w501 ovaries	SRR553487 NRT_0-2 hours eggs
.............................................................................................................................................................................................................TTATTTTGGTGAAAGAGGGT.........................	20	2	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................AGCGCAACGTAGCTTATTTTGGT...................................	23	3	2	0.50	1	0	1	0	0	0	0
........................................................................................................................................................AAAAACGTTAGAAGCCTAAGCT............................................................................	22	3	4	0.25	1	0	0	1	0	0	0
.................................................................................................................................................................................................................TTTTGTAGAAGACGGTTA.......................	18	2	7	0.14	1	0	0	0	1	0	0
...................................................................................................................................................................................................................TGGTAAAAGATGGTT........................	15	1	19	0.05	1	0	0	0	0	1	0
.....................................CTAATTGCTTTTGTA......................................................................................................................................................................................................	15	1	20	0.05	1	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:3457456-3457705 -	dsi_13927	GGGGCGCA------GTAGATGGTGCTGGACTA------G-TTTGGA-TC----------------------------GAGATTAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TGA-GGCCAAAATAGGTTAT---------------------------------------------------------------------AATGT----AAA-----GTAGTTAACATA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------TACTTTGT-AACTTCAAAT--TTGTGCA-ATCTGCCGATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGCAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA
droSec2	scaffold_1:259345-259575 -		GGGGCGCA------GTAGATGGTGCTGGACTA------G-TTTGGA-AC----------------------------GAGATTAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TGA-GGCCAAAATAGATTAT---------------------------------------------------------------------AATGC----AAA-----GTAGTTAGCCTA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------TACTTT-----------------GTGCA-ATCTGCCGATT-CGAGG-----GACATTAGCT-----TATCGCAT-AGCAACAAATAAAACCAT-TTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA
dm3	chr2R:2594952-2595199 -		GGGGCGCA------GTAGATGTTGCTGAACTA------G-TTTGGA-AC----------------------------GAGATAAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TCA-GGCCAAAATAGGTT-----------------------------------------------------------------------CATGT----AAA-----GTAGTTAGCCTA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------GACTTTGT-AACTTCAAAT--TTTTGCA-ATCTGCCTATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGCAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGGCA
droEre2	scaffold_4929:19950345-19950575 +		AGGGCGCA------GCAGGTGGTGCTGAACTA------G-TTTGGA-AC----------------------------GAGATCAACG-AAAACGTAATGCCAAG-TGGGATT------------------------T--------A-ACT-AGC-AAAATAG-TA-----------------------------------------------------------------------CTT--------------GTAGTCAGCCGA-----------------------------ACTCATCAT------------------------------------------------------------------------------------------------TCGAACTTTC------------------------------------------------------------------------------------------------------------------------GCTTGC-----------------AACTCCAAGT---AGCGCA-ATCTCCGGATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGAAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA
droYak3	2L:15337839-15338071 -		AGGGCGCA------GCCGATGGTGCTGAACTA------G-TTTGGA-TC----------------------------GAGATTAACG-AATACGCACTGCGAAG-TGGGATT------------------------T--------A-TCT-GGCAAAAATAAGTT-----------------------------------------------------------------------CATGT----AAA-----GTTGTTAGCCTA-----------------------------ATTCATCGT-----------------------------------------------------------------------------------------------TT--------C------------------------------------------------------------------------------------------------------------------------GTTTAC-----------------AACTCCCCAT--ATCCGCA-ATCTCTCGATA-CGTGGGCCTAGACATTTGCT-----TATCGCAT-CAGAACGAATAAAACCATTTTCTGCCAATTATATTATAAAGATAGGC-------AGCCA
droEug1	scf7180000409462:3466523-3466878 -		AGGGCGCA------GCAGTTAGCACTGAAATA------G-TTTGCAAAC----------------------------CAATTTAATGGAAAATGTAATGCCAAC-TGAAGTT------------------------T--------TCT-A-AGCTTAAA--------------------------------------------TTAGGAAATATTTAAGATTAATGACA---GCA-TTTGT----GAA-----GCTATCA-CTTA-----------------------------ATACACCCT-----------------------------------------------------------------------------------------------TT--------T-----------------ACAAGCTATTTCACGTGAATTTATCCCTTTGATCATAAGCAAACATAGTTAGTTGGCTGTAAAAGAGTTAT------CTTATGAAAGG-TTTTTCGCATTCGTGTT--------CGAAACAATGTAAATTTGAACAA------TA-ATCATTTGGTTATGAAGGC-TAGACATTAGCT-----TATCGCTTTCAAAGGGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGC----------CA
droBia1	scf7180000302292:3555880-3556178 +		GCGGCGCA------GCAGATAGCACTGAACTA------G-TTAGCG-CC----------------------------GAGATCAATGGAAAATGTAATGTCAAG-TGAAACC------------------------T--------A-TAT-GAA-------------------------------------------------------------------TAAAAATA---ACA-AATAA----GAA-----G-TATTA------------------------------CATT-------GTATAAAT--GTCTCTAAAAAAAAAGAA-------------------------------------CACCATGGCTGAGATA-TTAGCAAATATTTTCT------AGTC------------------------------------------------------------------------------------------------------------------------GAAAGTCACTTCGTAACAAAATCAACTTCAACTA------AA-TTCATTCAGTT-CGAAGGC-TAGACATTAGCT-----TATCGCAT-CAGAGCGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCCAGCA--CACCA
droTak1	scf7180000413887:6685-6957 +		AGGGCGCA------GCAGATAGCACTGAACTA------G-TTTGCA-AC----------------------------GAGATCAATGAAAAATGTAATGTCAAG-AAAAA--------AATATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT-----TTTATTTT-------------------AGAATTTAAAAAGGATTTGCTTTTACCGAGAAAGAAAGCTTATAAATACACCAT---------------------------------AATC---------------------G-AAAGTCG---------------------------------------------------------------------------------------CCTGTT--------CGCAACAATGTCAACTTCAACT------ACA-ATCTTTTGGTT-CGAAGGC-TAGACATTAGCT-----TATCGCCT-CAAAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGC-------TATCA
droEle1	scf7180000491217:416116-416399 +		AGGGCGCC------GCAAATAGCGCTGAACTA------G-TTTGCA-AC----------------------------TA-------------TGTAAGGTTTAG-T-----------------------------------------------------TAAA---TAAACAAATAACA---------------------------------------------------------AAAATAGGGGAAACCCTGCTATAA------------------------------CTTT-------GTTTCATT------------------------------------------------------------------------------------------------------------------------------------------------------TAATA-TATC--------------AGTAAAAAAGGAAATGAAAAACTAAGAACGCCTTAATTGCA--CCCATT--------CGCAACAATGTAAACTTCAACTA------TAAATCGTTATGCT-CGAAGGC-TAGACCTTAGCTTGCGTTATCGCAT-CAGAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCCAGC---AACCA
droRho1	scf7180000766409:483203-483464 -		AGGGCGCC------GCAAATAGCGCTGAACTA------G-ATTGCA-AC----------------------------GAGTTTAATGGGAAATGTAAGGTCGAG-TGTGTCCGAAT-ACAT-TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAACTCTCT-------TTTTCGGTTAAT--CTCAAAATATAAAGGGTATTA---------GACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------GAATGCTTTCATTGCA-----TTT--------CGCAA-----TAAACTTCAACTA------TA-ATCTTTTTGTT-CGAAGGC-TAGGCCATAGCTGGCGTTATCGCAT-CAGCACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGA-------A---A
droFic1	scf7180000453955:706080-706402 +		AGGGCGCT------GCAGATAGCGCTGAACTA------G-TTTGCA-GC----------------------------GGGTTCCATGGAAAGTGTAAG-CTGCA-TAGCGAT------------------------T--------C-ACT-GGCTTAGCTAAACTATAAATAAAGAACATTGTTTGTTAAATCTGAAATTAAC------------TTG---TATTGACAATCGCTTTGGCT----CTA-----GTTGTCAACATACCTAAGTATGTAGGCTCTTAT-----TTGATTTTCGAT-----------------------------------------------------------------------------------------------TTCGCTTTTCC------------------------------------------------------------------------------------------------------------------------GTT--------CGCAACTATGTAAGCTTCAACTA------CA-ATAG--CTTTT-CGAAGGC-T-GCGATTAGCT-----TATCGCAT-CAGAGCGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCC------AGCAA
droKik1	scf7180000302470:157508-157826 -		CAGGGGCA------GCTGGAAGTGCTTCAAGATGCTTATTTTTGTA-AC----------------------------TA----AGCA-AAATGGTAATGGAATT-ATCACTT------------------------T--------A-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGGAATAAAACATGTTA---------GAC---------------------------TGAAATAATTACTAATTACTCTTTTGGGATCATAAACTGGTTGTGTAATATTCCGGCTAGATCACGTGTGCGGAGCATTCTGAATAATA-TAAA---------------------------------------------------CCC------ATT----------CAACAATGTAAAC--CAAATACATTCAGA-ATCGGTTTATT-CGAGGGC-TAGGCATTAGCTTTGCCTATCGCGT-TGCCTAGTATAAAGGCATTTTCTGCCAATTATATTGTAAAGATAAGC-------AACTA
droAna3	scaffold_13266:18414611-18414666 +		A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCT-----TATCGCG-------GACATAAAGACATTTTCTGCCAATTATACTGTAAAGATAAGT------------
droBip1	scf7180000396735:1686549-1686601 +		A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT-----TATCGCG-------GACATAAAAGCATTTTCTGCCAATTATACTGTAAAGATAAGT------------
dp5	3:859587-859908 -		CAGGCGCCAACGCAGAAGGCTATGCTGGA------------------AATGTGCAAAATGTTGAATTAACTGTGATTGTTTTTAGCGGAAAATGTAAGTT-GTAGA-------AAGTAAATGTGTCGCATCGAAGCTGGAGGGATCCT-GA---------------------------------------------AACCAAGAGGGGAGATCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGTATGACCGTATCGTTGAGGATAATA-TATG--------------TGTATAATTGTAAA--ATCAGCTAGACACGGCTGATTCTC------CTCCCC--------GAA----T-AGCTCTAACC--TTATCAC-ATCTCC---------------------TGGCT-----TATCGCGT-TTCACAATATAATACCACTTTCTGTCAATTATATTGTAAAGATAGGCCATCGCCAGGCA
droPer2	scaffold_2:1035460-1035781 -		CAGGCGCCAACGCAGAAGGCTATGCTGGA------------------AATGTGCAAAATGTTGAATTAACTGTGATTGTTTTTAGCGGAAAATGTAAGTT-GTAGA-------AAGTAAATGTGTCGCATCGAAGCTGGAGGGATCCT-GA---------------------------------------------AACCAAGAGGGGAGATCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGTATGACCGTATCGTTGAGGATAATA-TATG--------------TGTATAATTGTAAA--ATCAGCTAGACACGGCTGATTCTC------CTCCCC--------GAA----T-AGCTCTAACC--TTATCAC-ATCTCC---------------------TGGCT-----TATCGCGT-TTCACAATATAATACCACTTTCTGTCAATTATATTGTAAAGATAGGCCATCGGCAGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GGGGCGCA------GTAGATGGTGCTGGACTA------G-TTTGGA-TC----------------------------GAGATTAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TGA-GGCCAAAATAGGTTAT---------------------------------------------------------------------AATGT----AAA-----GTAGTTAACATA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------TACTTTGT-AACTTCAAAT--TTGTGCA-ATCTGCCGATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGCAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..............GTAGATGGTGCTGGACTA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------T.....................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................GCCAAG-TGGGCTT------------------------T--------A-TGA-G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..............GTAGATGGTGCTGGACTA------G-TTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCAT-CGCAACGAATAA...............................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..............GTAGATGGTGCTGGACTA------G-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................A-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------T.....................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------T.....................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GGGGCGCA------GTAGATGGTGCTGGACTA------G-TTTGGA-AC----------------------------GAGATTAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TGA-GGCCAAAATAGATTAT---------------------------------------------------------------------AATGC----AAA-----GTAGTTAGCCTA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------TACTTT-----------------GTGCA-ATCTGCCGATT-CGAGG-----GACATTAGCT-----TATCGCAT-AGCAACAAATAAAACCAT-TTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.......................GCTGGACTA------G-TTTGGA-AC----------------------------GAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGCCGATT-CGAGG-----GACA...............................................................................	20	1	1.00	1	0	0	0	1

dm3

GGGGCGCA------GTAGATGTTGCTGAACTA------G-TTTGGA-AC----------------------------GAGATAAACG-AAAACGTAATGCCAAG-TGGGCTT------------------------T--------A-TCA-GGCCAAAATAGGTT-----------------------------------------------------------------------CATGT----AAA-----GTAGTTAGCCTA-----------------------------ATTTATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------GACTTTGT-AACTTCAAAT--TTTTGCA-ATCTGCCTATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGCAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGGCA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................TGCTGAACTA------G-TTTGGA-AC----------------------------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................AATAGGTT-----------------------------------------------------------------------CATGT----AAA-----GTAGTTAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACATTAGCT-----TATCGCAT-CGCAACGA...................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................ATCAT-----------------------------------------------------------------------------------------------TTTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------GA....................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................TAATGCCAAG-TGGGCTT------------------------T--------A-TCA-GGCCAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AAAACGTAATGCCAAG-TGGGCTT------------------------T--------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................ACGTAATGCCAAG-TGGGCTT------------------------T--------A-TCA-GGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................TTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------GACTTTGT-AACTTCAAA....................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...............................................AC----------------------------GAGATAAACG-AAAACGTAATGCCAAG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCA-ATCTGCCTATT-CGAGGGC-TAGACA...............................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AACTTCAAAT--TTTTGCA-ATCTGCC..................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CG.........................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGAATTTTC------------------------------------------------------------------------------------------------------------------------GTTTGC--------GACTTTGT-AAC..........................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-AACTTCAAAT--TTTTGCA-ATCTGCC..................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................CGTAATGCCAAG-TGGGCTT------------------------T--------A-T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACATTAGCT-----TATCGCAT-CGCAACGAA..................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................ACTA------G-TTTGGA-AC----------------------------GAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	16	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAT--TTTTGCA-ATCTCA...................................................................................................	19	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AGGGCGCA------GCAGGTGGTGCTGAACTA------G-TTTGGA-AC----------------------------GAGATCAACG-AAAACGTAATGCCAAG-TGGGATT------------------------T--------A-ACT-AGC-AAAATAG-TA-----------------------------------------------------------------------CTT--------------GTAGTCAGCCGA-----------------------------ACTCATCAT------------------------------------------------------------------------------------------------TCGAACTTTC------------------------------------------------------------------------------------------------------------------------GCTTGC-----------------AACTCCAAGT---AGCGCA-ATCTCCGGATT-CGAGGGC-TAGACATTAGCT-----TATCGCAT-CGAAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAGGC-------AGCCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

AGGGCGCA------GCCGATGGTGCTGAACTA------G-TTTGGA-TC----------------------------GAGATTAACG-AATACGCACTGCGAAG-TGGGATT------------------------T--------A-TCT-GGCAAAAATAAGTT-----------------------------------------------------------------------CATGT----AAA-----GTTGTTAGCCTA-----------------------------ATTCATCGT-----------------------------------------------------------------------------------------------TT--------C------------------------------------------------------------------------------------------------------------------------GTTTAC-----------------AACTCCCCAT--ATCCGCA-ATCTCTCGATA-CGTGGGCCTAGACATTTGCT-----TATCGCAT-CAGAACGAATAAAACCATTTTCTGCCAATTATATTATAAAGATAGGC-------AGCCA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................................................................................................................................................................................................................................................................GTTAGCCTA-----------------------------ATTCATCGT-----------------------------------------------------------------------------------------------TT--------C------------------------------------------------------------------------------------------------------------------------GT..................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................TAACG-AATACGCACTGCGAAG-TGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................ATTCATCGT-----------------------------------------------------------------------------------------------TT--------C------------------------------------------------------------------------------------------------------------------------GTTTAC-----------------AACTCCC......................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................TACGCACTGCGAAG-TGGGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................AGTT-----------------------------------------------------------------------CATGT----AAA-----GTTGTTAGCCTA-----------------------------ATTC...........................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

AGGGCGCA------GCAGTTAGCACTGAAATA------G-TTTGCAAAC----------------------------CAATTTAATGGAAAATGTAATGCCAAC-TGAAGTT------------------------T--------TCT-A-AGCTTAAA--------------------------------------------TTAGGAAATATTTAAGATTAATGACA---GCA-TTTGT----GAA-----GCTATCA-CTTA-----------------------------ATACACCCT-----------------------------------------------------------------------------------------------TT--------T-----------------ACAAGCTATTTCACGTGAATTTATCCCTTTGATCATAAGCAAACATAGTTAGTTGGCTGTAAAAGAGTTAT------CTTATGAAAGG-TTTTTCGCATTCGTGTT--------CGAAACAATGTAAATTTGAACAA------TA-ATCATTTGGTTATGAAGGC-TAGACATTAGCT-----TATCGCTTTCAAAGGGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGC----------CA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GCGGCGCA------GCAGATAGCACTGAACTA------G-TTAGCG-CC----------------------------GAGATCAATGGAAAATGTAATGTCAAG-TGAAACC------------------------T--------A-TAT-GAA-------------------------------------------------------------------TAAAAATA---ACA-AATAA----GAA-----G-TATTA------------------------------CATT-------GTATAAAT--GTCTCTAAAAAAAAAGAA-------------------------------------CACCATGGCTGAGATA-TTAGCAAATATTTTCT------AGTC------------------------------------------------------------------------------------------------------------------------GAAAGTCACTTCGTAACAAAATCAACTTCAACTA------AA-TTCATTCAGTT-CGAAGGC-TAGACATTAGCT-----TATCGCAT-CAGAGCGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCCAGCA--CACCA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGGGCGCA------GCAGATAGCACTGAACTA------G-TTTGCA-AC----------------------------GAGATCAATGAAAAATGTAATGTCAAG-AAAAA--------AATATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT-----TTTATTTT-------------------AGAATTTAAAAAGGATTTGCTTTTACCGAGAAAGAAAGCTTATAAATACACCAT---------------------------------AATC---------------------G-AAAGTCG---------------------------------------------------------------------------------------CCTGTT--------CGCAACAATGTCAACTTCAACT------ACA-ATCTTTTGGTT-CGAAGGC-TAGACATTAGCT-----TATCGCCT-CAAAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGC-------TATCA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGGGCGCC------GCAAATAGCGCTGAACTA------G-TTTGCA-AC----------------------------TA-------------TGTAAGGTTTAG-T-----------------------------------------------------TAAA---TAAACAAATAACA---------------------------------------------------------AAAATAGGGGAAACCCTGCTATAA------------------------------CTTT-------GTTTCATT------------------------------------------------------------------------------------------------------------------------------------------------------TAATA-TATC--------------AGTAAAAAAGGAAATGAAAAACTAAGAACGCCTTAATTGCA--CCCATT--------CGCAACAATGTAAACTTCAACTA------TAAATCGTTATGCT-CGAAGGC-TAGACCTTAGCTTGCGTTATCGCAT-CAGAACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCCAGC---AACCA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGGGCGCC------GCAAATAGCGCTGAACTA------G-ATTGCA-AC----------------------------GAGTTTAATGGGAAATGTAAGGTCGAG-TGTGTCCGAAT-ACAT-TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAACTCTCT-------TTTTCGGTTAAT--CTCAAAATATAAAGGGTATTA---------GACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------GAATGCTTTCATTGCA-----TTT--------CGCAA-----TAAACTTCAACTA------TA-ATCTTTTTGTT-CGAAGGC-TAGGCCATAGCTGGCGTTATCGCAT-CAGCACGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGA-------A---A	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AGGGCGCT------GCAGATAGCGCTGAACTA------G-TTTGCA-GC----------------------------GGGTTCCATGGAAAGTGTAAG-CTGCA-TAGCGAT------------------------T--------C-ACT-GGCTTAGCTAAACTATAAATAAAGAACATTGTTTGTTAAATCTGAAATTAAC------------TTG---TATTGACAATCGCTTTGGCT----CTA-----GTTGTCAACATACCTAAGTATGTAGGCTCTTAT-----TTGATTTTCGAT-----------------------------------------------------------------------------------------------TTCGCTTTTCC------------------------------------------------------------------------------------------------------------------------GTT--------CGCAACTATGTAAGCTTCAACTA------CA-ATAG--CTTTT-CGAAGGC-T-GCGATTAGCT-----TATCGCAT-CAGAGCGAATAAAACCATTTTCTGCCAATTATATTGTAAAGATAAGCC------AGCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAGGGGCA------GCTGGAAGTGCTTCAAGATGCTTATTTTTGTA-AC----------------------------TA----AGCA-AAATGGTAATGGAATT-ATCACTT------------------------T--------A-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAGGAATAAAACATGTTA---------GAC---------------------------TGAAATAATTACTAATTACTCTTTTGGGATCATAAACTGGTTGTGTAATATTCCGGCTAGATCACGTGTGCGGAGCATTCTGAATAATA-TAAA---------------------------------------------------CCC------ATT----------CAACAATGTAAAC--CAAATACATTCAGA-ATCGGTTTATT-CGAGGGC-TAGGCATTAGCTTTGCCTATCGCGT-TGCCTAGTATAAAGGCATTTTCTGCCAATTATATTGTAAAGATAAGC-------AACTA	Size	Hit Count	Total Norm	Total
No Reads

droAna3

A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCT-----TATCGCG-------GACATAAAGACATTTTCTGCCAATTATACTGTAAAGATAAGT------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCT-----TATCGCG-------GACATAAAAGCATTTTCTGCCAATTATACTGTAAAGATAAGT------------	Size	Hit Count	Total Norm	Total
No Reads

dp5

CAGGCGCCAACGCAGAAGGCTATGCTGGA------------------AATGTGCAAAATGTTGAATTAACTGTGATTGTTTTTAGCGGAAAATGTAAGTT-GTAGA-------AAGTAAATGTGTCGCATCGAAGCTGGAGGGATCCT-GA---------------------------------------------AACCAAGAGGGGAGATCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGTATGACCGTATCGTTGAGGATAATA-TATG--------------TGTATAATTGTAAA--ATCAGCTAGACACGGCTGATTCTC------CTCCCC--------GAA----T-AGCTCTAACC--TTATCAC-ATCTCC---------------------TGGCT-----TATCGCGT-TTCACAATATAATACCACTTTCTGTCAATTATATTGTAAAGATAGGCCATCGCCAGGCA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGTATGACCGTATCGTTGAGG...........................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	2
..............GAAGGCTATGCTGGA------------------AATGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.................................................................TTAACTGTGATTGTTTTTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................TGAATTAACTGTGATTGTTTTTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACCGTATCGTTGAGGAT.........................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...........................................................GTTGAATTAACTGTGATTGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

CAGGCGCCAACGCAGAAGGCTATGCTGGA------------------AATGTGCAAAATGTTGAATTAACTGTGATTGTTTTTAGCGGAAAATGTAAGTT-GTAGA-------AAGTAAATGTGTCGCATCGAAGCTGGAGGGATCCT-GA---------------------------------------------AACCAAGAGGGGAGATCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCGTATGACCGTATCGTTGAGGATAATA-TATG--------------TGTATAATTGTAAA--ATCAGCTAGACACGGCTGATTCTC------CTCCCC--------GAA----T-AGCTCTAACC--TTATCAC-ATCTCC---------------------TGGCT-----TATCGCGT-TTCACAATATAATACCACTTTCTGTCAATTATATTGTAAAGATAGGCCATCGGCAGGCA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................GTTGAATTAACTGTGATTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
............CAGAAGGCTATGCTGGA------------------AATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0
.......CAACGCAGAAGGCTATGCTGGA------------------AAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0

-11.2	-11.0	-10.9	-10.7

dsi_13927

2r:3457506-3457655 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads