ID:

dsi_13908

 Coordinate:

2r:4692463-4692612 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.5 -18.3 -18.3

Flybase annnotation

exon [2r_4692174_4692462_-]; CDS [2r_4692174_4692462_-]; intron [2r_4692463_4693578_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGTGAATTATCTATTTTGTTTTGCTATCCGGGTGTTGCCAATGAACGTCGCAATGACGTCACGATTGATTTTTACCTACAATAAAGCTCCATAATTTTCCCCACACCCGCGACGAGTACGCCGTCCTTGGGGCATTGGGCTTATTAAATCAAAATGAACTGATTATATGAACCTGTGTTCGAACCCTTTCTGATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGA
**********************************************************************************************...................................((((((.((((.((((..(((((........)))))..)))).))))))).....))).************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
.....................................GCCAATGAACGTCGCAATGA................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGCCTC..................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CTGGTTGGGGTCATGCCTC..................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGTGCAGGCCGTGTGGGCT...................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................ATTTTCCCCACACCCGCGAC........................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................ATTTTCCCCACACCCGTGAC........................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................TGAACCTGTGTACGAA.................................................................. 16 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................ATTTTCCCCACACCCGCGACGA...................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................TCCGGGTGTTGCCAATGAACG.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTGGGCTGGTTGGGGT............................. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTC............................ 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................AGTGCAGGCCGTGTGGGCTGGTTGGG............................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGAGAACCCGAAGCTGCCG.. 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................ATGAACCTGTGTTCGAACCCT.............................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................TCTGATTGCAGGCCATGAGGA........................................ 21 3 6 0.33 2 0 0 0 0 0 0 0 2 0 0
.................................................................................................................................................................................................ATTGCAGGCGCTGTGGGCT...................................... 19 2 3 0.33 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................TCCTATGTTCGAACCCT.............................................................. 17 2 5 0.20 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................CCGCCGTCCTTGGGCCAT.................................................................................................................. 18 2 6 0.17 1 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................GGGGTCATGCCTCGG................... 15 1 6 0.17 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................AGTAAGGCGTCCTTGTGGC.................................................................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 1 0 0 0
.....................................GCCAATGCCCGTCGCAAGGA................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................CGAGAATCCGAAGCT...... 15 1 16 0.06 1 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................CCATGTTCGAACCCT.............................................................. 15 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................GTTCGAATCCTTTCTGG........................................................ 17 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..................................................GCACTGACGTCACGCTAG...................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GCTGGCCTTGGGGCATT................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

CACACTTAATAGATAAAACAAAACGATAGGCCCACAACGGTTACTTGCAGCGTTACTGCAGTGCTAACTAAAAATGGATGTTATTTCGAGGTATTAAAAGGGGTGTGGGCGCTGCTCATGCGGCAGGAACCCCGTAACCCGAATAATTTAGTTTTACTTGACTAATATACTTGGACACAAGCTTGGGAAAGACTAACGTCCGGCACACCCGACCAACCCCAGTACGGAGGCTCTTGGGCTTCGACGGCCT
**************************************************************...................................((((((.((((.((((..(((((........)))))..)))).))))))).....))).********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
...........................................................................CGATGTCATTTCGAGGTA............................................................................................................................................................. 18 2 2 334.50 669 503 160 5 0 0 1 0 0 0 0
..........................................................................TCGATGTCATTTCGAGGTA............................................................................................................................................................. 19 2 2 268.50 537 399 129 4 1 0 4 0 0 0 0
.........................................................................TTCGATGTCATTTCGAGGTA............................................................................................................................................................. 20 3 10 6.60 66 48 15 2 0 0 1 0 0 0 0
............................................................................GATGTCATTTCGAGGTAC............................................................................................................................................................ 18 2 2 6.00 12 10 1 1 0 0 0 0 0 0 0
............................................................................GATGTCATTTCGAGGT.............................................................................................................................................................. 16 1 1 6.00 6 0 0 0 3 3 0 0 0 0 0
..........................................................................CCGATGTCATTTCGAGGTA............................................................................................................................................................. 19 3 12 5.75 69 47 21 0 0 0 1 0 0 0 0
...........................................................................GGATGTCATTTCGAGGTA............................................................................................................................................................. 18 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................GCGATGTCATTTCGAGGTA............................................................................................................................................................. 19 3 11 1.55 17 13 2 0 0 0 2 0 0 0 0
.............................................................................ATGTTATTTCGAGGT.............................................................................................................................................................. 15 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................GATGTCATTTCGAGGTA............................................................................................................................................................. 17 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..........................................................................TTGATGTCATTTCGAGGTA............................................................................................................................................................. 19 2 2 1.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................TCGATGTCATTTCGAGGT.............................................................................................................................................................. 18 2 4 1.00 4 2 0 1 1 0 0 0 0 0 0
.........................................................................TTCGATGTCATTTCGAGGTATTAA......................................................................................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................CGATGTCATTTCGAGGT.............................................................................................................................................................. 17 2 12 0.58 7 0 0 0 3 2 0 1 0 1 0
..........................................................................TCGATGTTATTTCGAGGTA............................................................................................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CCAGTTCGGAGGCTC................. 15 1 6 0.50 3 0 0 0 2 0 0 0 0 1 0
...................................................................................................GGGATGTGGGCGCTGCCTA.................................................................................................................................... 19 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..........................................................................TCGATGTCATTTCGAGGTG............................................................................................................................................................. 19 3 20 0.20 4 2 1 0 1 0 0 0 0 0 0
...............................................................................GTTCTTTCGAGGTGTTAA......................................................................................................................................................... 18 2 12 0.17 2 0 0 1 0 1 0 0 0 0 0
....................................................ATACTGCAGTGCTAAAT..................................................................................................................................................................................... 17 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0
...............................................................................GTTATTTCAAGGTGTTAAA........................................................................................................................................................ 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1
.............................................................................ATGTCATTTCGAGGT.............................................................................................................................................................. 15 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................AGCTTGGGAACGACTCA...................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................GGCGCTTGGGCTTCCAC..... 17 2 12 0.08 1 0 0 0 0 0 0 0 0 1 0
..........................................................................TCGATGTCATTTCGAGCTA............................................................................................................................................................. 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0 0
...........................................................................CGATGTCATTTCCAGGTA............................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................ACGGTTGTGGCCGCTGCTCA.................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................TCAACCCCAATACGGAGGT................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0
..........................................................................ACGATGTCATTTCGAGGTA............................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:4692413-4692662 - dsi_13908 GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCTA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTA-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAATCAA---AAT-GAACTGATTATATGAACCTGTGTTCGAACCCTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGA
droSec2 scaffold_1:1506233-1506482 - GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTA-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAATCAA---AAT-GAACTGATTATATGAACCTGTGTTCGAACCCTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCTGA
dm3 chr2R:3868928-3869175 - GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTG-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAGTCAA---AAT-GAACTGATTA--TTAACCTGTGTTCGAACCTTTCT---CG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGA
droEre2 scaffold_4929:18759213-18759453 + GTGTGAA--TTATCTATTT---T-TCTTGCTATCCGGGTGT-------AGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATAATT--C---CCCCACCTACGG----------C------CAGTG-------C-------GCTGTCCTTGGGGTATTGT------GCTTATTAAATCGA---AAT-GAACTGATTA--TGAACCTGTGTA------CTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAACTGCCGGA
droYak3 2L:16525248-16525495 - GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------AGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCACGA----------C------GTGTG-------C-------GCTGTCCTTGGGGTACTGG------GCTTATTAAATCAA---AAT-GTACTGATTA--TTAACCTGTGTGCAATCCCTTTC---TG---ATTTCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGA
droEug1 scf7180000409474:2705710-2705961 - GTGTGAA--TTATCTATTT---TGTTTTGCTATACGGGTGT-------TGTCGATGAC------------TACAG-CAATGACGTCACGATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTTC--C---TCACACCCACCA----------C------CAC---GCAGTCC-------ACTGTCCTTGAGGTATTGG------GCTTATTAAATCAA---AAT-GAACTGATTA--CGAATTTGCTTGTGAACCGTTTC---TG---ATTTTAGGCCGTATGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCAGA
droBia1 scf7180000302291:1710631-1710895 - GTGTGAA--TTATCTATTT---TGTTTTGCTTTCCGGGTGT-------TGTCGATGAA------------TGCGG-CAATGACGTCACGATTGATTT--TTCATAA-CAATAAAGCGGCATACCATAATTTTC--C---CCACACCCACAC----CCTCACCCACCCCCACTC-------C-------GCTGTCCTTGAGGTATTGG------GCTTATTAAATGAA---AAT-GAACTGTTTA--TGACCCCGTTTATGAACCGATTC---TG---ATTGCAGGCCGTTTGGGCTGGCTGGGGTCATGCCTCCGAGAACCCTAAGCTGCCGGA
droTak1 scf7180000415088:264170-264409 + GTGTGAATATTATCTATTT---TGTTTTGCTGTCCGGGTGT-------TGCCG-------------------------ATGACGTCACAATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTCC--C---CCACACCCACTAAAGCCCACTTC------CACTC-------C-------GCTGTCCTTGGGGTATTGG------GCTTATTAAATCAA---AAT-AAACTGATTG--TGAACACTTTT--------TTTC---TG---ATTGCAGGCCGTCTGGGCTGGTTGGGGTCATGCCTCCGAGAATCCCAAGCTGCCGGA
droEle1 scf7180000491258:169549-169793 + GTGTGAA--TTATCTATTT---TGTTTTGCTATCCG-GTGT-------TGTCGATTCGTGCCGCTTCG---------AATGACGTCACGATTGATTT--TTGCCGA-CCATAAAGCTCC-----ATAATTTAC--C---CCACACCCACAA----CCACAAC------CACTC-------C-------ACTGTCCTTGGGGTATTA---------TTATTAAA-CAA---AATAAAACTGATTG--CGAACG--TTTA-------TTTC---TG---ATTTCAGGCCGTATGGGCTGGCTGGGGTCATGCCTCTGAGAATCCCAAGCTGCCGGA
droRho1 scf7180000774573:116002-116249 - GTGTGAA--TTATCTATTT---TGTTTTGCTATCCG-GTGT-------TGACGATGAA------------TACGGCCAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCACAC----------C------CACTC-------A-------GCTGTCCTTGGGGTATTGG------GCTTATTAAATCAA---ATT-GAACTGATTA--AGAACCCGTTTCTGAACCGTTTC---TG---ATTGCAGGCCGTCTGGGCTGGCTGGGGTCATGCCTCCGAGAATCCAAAGCTGCCTGA
droFic1 scf7180000453215:342010-342256 + GTGTGAA--TTATCTATTT---T-TTTCGCTATCCG-GCAT-------TGTCGATGAA------------CGCGG-CAATGACGTCACGATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTTC--C---AAACACTCACAC----------C------CACTC-------C-------GCTGTCCTTGGGGTATTGGG-----GCTCATTATATTGA---AAT-GAACTGATTA--TGAACCCGTTTATGAACCGTTTA---TG---ATTGCAGGCTGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCAAAGCTGCCAGA
droKik1 scf7180000302471:491349-491588 - GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGC------------------------------------GG-CAATGACGTCACAATTGATTT--TTACCCAGCCATAAAGCTCC-----ATAATTGTTACCGCTCCACTC-CGCTT----CCACTAC------CACTC-------C-------AGTGTCCTTGG-GTCTTG-------ACTTATTGAATCAA---CAT-AAACTGATTG--TGAACCAATTTTCTGA---TTTC---TGCCTATTTCAGGCCGTCTGGGCTGGCTGGGGTCATGCTTCCGAGAACCCCAAACTGCCGGA
droAna3 scaffold_13266:16193024-16193301 - GTGTGAA--TTATCTATTT---TGTTTTGCCAACCGC-CGTACAATACTTCCATCGAA------------CAGTC-CCCTGACGTCACAATTGATTTTTTTACCGACCAATAAAGCCTC-----ATAATTT-C--C---GCACTCCCACTT----CCACTTCCACCTCCACCTCG-AGTCCACATTTGGGCGTCCCTGG-GTGTTG-------GCTTATTGAATCTAT--TATAGAACTGATTA--TAGAGCA------GAACCCTTGCTGATA---ATTACAGGCTGTGTGGGCCGGCTGGGGTCATGCCTCTGAGAATCCCAAGCTGCCGGA
droBip1 scf7180000396567:673287-673542 - GTGTGAA--TTATCTATTT---TGTTTTGCCATCCGG-CGA-------TG-------GTGTCGCT-GGAATGGCC-CCCTGACGTCACAATTGATTT--TTACCGACCAATAAAGTTTC-----ATAATTC-C--C---GCACTCGCACTC----CCACTTC------CACTCCGCA-------GTTGGGTGTCCCTGG-GTGTTG-------GCTTATTGAATCTAGTATATAGAACTGATTA--AGGGTT--C-----------TGCTGATA---ATTACAGGCTGTGTGGGCCGGCTGGGGTCATGCCTCTGAGAACCCCAAGCTTCCGGA
dp5 3:5499332-5499484 - GTGTGAA--TTATCTAATTTTTTGTTGTGCTATCAT------------------------------------TCG-CTATGAGGTCA-----------------------TAAAGTGTT-----AT----------------------------------------------------------------------------ATTGGGGCTTCAATTAT-------------------TGATTA--TGGATG--A---------TATTA---TG---ATTACAGGCTGTCTGGGCTGGATGGGGTCATGCCTCGGAGAACCCCAAGTTGCCGGA
droPer2 scaffold_2:5698619-5698771 - GTGTGAA--TTATCTAATTTTTTGTTGTGCTATCAT------------------------------------TCG-CTATGAGGTCA-----------------------TAAAGTGTT-----AT----------------------------------------------------------------------------ATTGGGGCTTCAATTAT-------------------TGATTA--TGGATG--A---------TATTA---TG---ATTACAGGCTGTCTGGGCTGGATGGGGTCATGCCTCGGAGAACCCCAAGTTGCCGGA
droWil2 scf2_1100000004513:1765933-1765995 - TTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---TTTCTAGGCCGTTTGGGCTGGTTGGGGTCATGCCTCAGAGAATCCGAAATTACCTGA
droVir3 scaffold_12875:14762661-14762723 - T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC---TT---TCTGCAGGCTGTGTGGGCTGGCTGGGGTCATGCGTCGGAAAATCCCAAACTGCCGGA
droMoj3 scaffold_6496:10234893-10234953 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TG---TATACAGGCCGTGTGGGCGGGCTGGGGTCATGCATCGGAGAATCCCAAATTGCCGGA
droGri2 scaffold_15245:14772822-14772887 - CTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTT---TA---ATTATAGGCCGTCTGGGCGGGTTGGGGCCATGCATCGGAGAATCCCAAATTGCCGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCTA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTA-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAATCAA---AAT-GAACTGATTATATGAACCTGTGTTCGAACCCTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................GCCAATGAA------------CGTCG-CAATGA............................................................................................................................................................................................................................................................2012.00200200000000000000
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGCCTC.....................2612.00200200000000000000
......................................................................................................................................................................................................................................................................................................CTGGTTGGGGTCATGCCTC.....................1911.00100010000000000000
...............................................................................................................................ATTTTC--C---CCACACCCGCGA----------C------......................................................................................................................................................................2011.00101000000000000000
...............................................................................................................................ATTTTC--C---CCACACCCGCGA----------C------GA....................................................................................................................................................................2211.00100010000000000000
................................TCCGGGTGT-------TGCCAATGAA------------CG......................................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGT.............................1811.00101000000000000000
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTC............................1911.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................CGAGAACCCGAAGCTGCCG..1911.00100000000000001000
.....................................................................................................................................................................................................................................................ATGAACCTGTGTTCGAACCCT....................................................................2111.00110000000000000000
droSec2
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTA-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAATCAA---AAT-GAACTGATTATATGAACCTGTGTTCGAACCCTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGC........................2114.0040400
.........................................................................................................................................................................................................................................................................................................GTTGGGGTCATGCCTCCGA..................1911.0010010
....................................................................................................................................................................................................................................................................................................GGCTGGTTGGGGTCATGCCTCCGAGAA...............2711.0010100
................................................................................................................................................................................................................................................................TTCGAACCCTTTC---TG---ATTGCAG..................................................2211.0010010
...........................................................................................................................................................................................................................................................................................GGCCGTGTGGGCTGGTTGG................................1911.0010010
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGTC............................2611.0010100
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCTGGTTGGG...............................1911.0010010
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTCATG.........................2711.0010100
..................................CGGGTGT-------TGCCAATGAA------------CGTCG-CAAT..............................................................................................................................................................................................................................................................2611.0010100
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGTCA...........................2711.0010100
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTTGGG...............................2411.0010010
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCTGGTTGGGGTC............................2211.0010100
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTT..................................2111.0010001
dm3
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------TGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTG-------C-------GCCGTCCTTGGGGCATTGG------GCTTATTAAGTCAA---AAT-GAACTGATTA--TTAACCTGTGTTCGAACCTTTCT---CG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTC............................24112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CG-CAATGACGTCACGATT..................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................C--C---CCACACCCGCGA----------C------GAGTG-------C-------..................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTTGGG...............................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000100000000
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGT.............................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTTGG................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000100000000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGC........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATGCCTCCGAGAACCCGAAGC.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................A--TTAACCTGTGTTCGAACCTTTT..................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGG..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTCCGA..................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCTGGTTGGGGT.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTG.................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................GTCCTTGGGGCATTGG------GCTTA....................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGG...............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCTGGTTGGGGTCATGCCTCCG...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAGGCCGTGTGGGCTGGTTGGGGTCA...........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCCGAGAACCCGAAGCTGCC...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGTGTGGGCTGGTTGGGGTCATGCCTC.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................GGCTGGTTGGGGTCATGCCTCCG...................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................C---CCACACCCGCGA----------C------GAG...................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GGCTGGTTGGGGTCATGC........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................ATTTTC--C---CCACACCCGCGA----------C------......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AATGACGTCACGATTGATTT--TTACCG.....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTACCGA-CAATAAAGCTCC-----AT................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCA...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................GT-------TGCCAATGAA------------CGTCG-CAA...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGGGTGT-------TGCCAATGAA------------CGTCG-..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCTGGTTGGGGTCATGCC.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTCATGCCTCCGAGAACCCGA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GTGT-------TGCCAATGAA------------CGTCG-CA................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................TTGGGGTCATGCCTCCGAGAACCCGAA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................C-------GCCGTCCTTGGGGCATTGG------G........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CCGTCCTTGGGGCATTGG------GCT......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGG..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCT......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................C-------GCCGTCCTTGGGGCATTGG------GC.......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................TCCGAGAACCCGAAGCTGCCGG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCTGGTTGGGGTCATG.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................GGTTGGGGTCATGCCTCCGA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCT......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTTG.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAGGCCGTGTGGGCTGGTTGGGGT.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTCCG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................CTCCGAGAACCCGAAGCTGCCGGA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGGGGTCATGCCTCCGAGAACC.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGG................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................TGGTTGGGGTCATGCCTCCGAGAACCCG...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................TCG-CAATGACGTCACGAT...................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
......................................TGT-------TGCCAATGAA------------CGTCG-CAA...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................................................TGGGGTCATGCCTCCGAGAACCCGA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................TCACGATTGATTT--TTACCGA-CAATAAAG...........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CATGCCTCCGAGAACCCGAAG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GGTTGGGGTCATGCCTCC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CG---ATTGCAGGCCGTGTGGGCTGGTT..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCTC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATTGCAGGCCGTGTGGGCTGGT...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTG.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GT-------TGCCAATGAA------------CGTCG-C.................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CCGTGTGGGCTGGTTGGGGTCA...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCTGGTTGGGGTCATGCC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCAC..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................TCCTTGGGGCATTGG------GCTTATTAAGT..............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................CCGTGTGGGCTGGTTGGGGT.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGGTTGGGGTCATGCCTCCGAGA................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGCCTCCGAGAACCCGAA.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTCC....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGC........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................C-----ATAATTTTC--C---CCACACCCGCGA----------C------GAGTG-------C-------..................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................TTGCAGGCCGTGTGGGCTGGT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTCA...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GAGTG-------C-------GCCGTCCTTGGGGCA...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................GTGT-------TGCCAATGAA------------CGTCG-CAA...............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTGTGAA--TTATCTATTT---T-TCTTGCTATCCGGGTGT-------AGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATAATT--C---CCCCACCTACGG----------C------CAGTG-------C-------GCTGTCCTTGGGGTATTGT------GCTTATTAAATCGA---AAT-GAACTGATTA--TGAACCTGTGTA------CTTTC---TG---ATTGCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAACTGCCGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGC........................2119.0092001420
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCT......................2316.0060001410
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGG...............................2313.0030000210
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCTC.....................2413.0030000120
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGT.............................2512.0020001010
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGCCTC.....................2612.0020000200
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGT.............................2312.0020011000
........................................................................................................................................................................CAGTG-------C-------GCTGTCCTTGGG......................................................................................................................................1811.0010000010
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGC........................2311.0010000100
........................................................................................................................................................................CAGTG-------C-------GCTGTCCTTGGGGT....................................................................................................................................2011.0010000010
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGTC............................2611.0010000010
...........ATCTATTT---T-TCTTGCTATCCGG.........................................................................................................................................................................................................................................................................................................2211.0010100000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTCATGC........................2811.0010000100
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGTTGGGGTCATGCCTCC....................2711.0010000100
..........................................................................................................................................................................................................................................................................TTC---TG---ATTGCAGGCCGTG............................................1811.0011000000
.......................................................................................................................................................................................................................................................................................................TGGTTGGGGTCATGCCTCCGAGAACCC............2711.0011000000
...............................................................................................................................................................................................................................................................GTA------CTTTC---TG---ATTGCAGGCCGTGTGGG........................................2711.0010000100
......................................................................................................................C-----ATAATAATT--C---CCCCACCTAC.........................................................................................................................................................................................2111.0010100000
....................................................................................................................................................................................................................................................................................................GGCTGGTTGGGGTCATGCCTCC....................2211.0010000010
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATG.........................2011.0010001000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCTCC....................2511.0010000010
..........................................................................................................................................................................GTG-------C-------GCTGTCCTTGGGGTATTGT------G........................................................................................................................2411.0010000010
.......................................................................................................................................................................................................................................................................................................TGGTTGGGGTCATGCCTCCGAGAACC.............2611.0010100000
.......................................................................................................................................................................................................................................................................................TGCAGGCCGTGTGGGCTGGTTGGG...............................2411.0010001000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGG................................2011.0010000100
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGG................................2211.0010000010
..............................................................................................................................................................................................................................................................TGTA------CTTTC---TG---ATTGCAG..................................................1811.0011000000
..............................................................................................................................................................................................................................................................................................................GGTCATGCCTCCGAGAACC.............1911.0010100000
.............CTATTT---T-TCTTGCTATCCGGGTGT-------..............................................................................................................................................................................................................................................................................................2411.0010000010
........................................................................................................................................................................................................................................................................................GCAGGCCGTGTGGGCTGGTTGGGGTCA...........................2711.0010000010
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGG...............................2111.0010000010
...............................................................................................................................................................................................................................................................................................................GTCATGCCTCCGAGAACCCGAAACTGCC...2811.0011000000
.....................................................................................................................................................................................................................................................................................................GCTGGTTGGGGTCATGCC.......................1811.0010000010
droYak3
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGGGTGT-------AGCCAATGAA------------CGTCG-CAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCACGA----------C------GTGTG-------C-------GCTGTCCTTGGGGTACTGG------GCTTATTAAATCAA---AAT-GTACTGATTA--TTAACCTGTGTGCAATCCCTTTC---TG---ATTTCAGGCCGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCTCC....................2512.00200000020000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTC............................2411.00100000010000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGC........................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................CGAGAACCCGAAGCTGCCGG.2011.00100000010000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGTTGGGGTCATGCCTC.....................2411.00100000010000
.........................................................................................................................................................................................................................................................................................CAGGCCGTGTGGGCTGGTTGGGGT.............................2411.00100000010000
..........................................................................................................................................................................................................................................................................................AGGCCGTGTGGGCTGGTTGGGGTCA...........................2511.00100000010000
................................................................................................................................................CCCACGA----------C------GTGTG-------C-------GCTGT.............................................................................................................................................1911.00110000000000
..............................................................................................................................................................................................................................................................................................CGTGTGGGCTGGTTGGGGTCATGCCTCC....................2811.00100100000000
...........................................................................................................................................................................................................................................................................................GGCCGTGTGGGCTGGTTGGG...............................2011.00100100000000
...........................................................................................................................................................................................................................................................................................GGCCGTGTGGGCTGGTTGGGGTCAT..........................2511.00101000000000
droEug1
GTGTGAA--TTATCTATTT---TGTTTTGCTATACGGGTGT-------TGTCGATGAC------------TACAG-CAATGACGTCACGATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTTC--C---TCACACCCACCA----------C------CAC---GCAGTCC-------ACTGTCCTTGAGGTATTGG------GCTTATTAAATCAA---AAT-GAACTGATTA--CGAATTTGCTTGTGAACCGTTTC---TG---ATTTTAGGCCGTATGGGCTGGTTGGGGTCATGCCTCCGAGAACCCGAAGCTGCCAGASizeHit CountTotal NormTotal
No Reads
droBia1
GTGTGAA--TTATCTATTT---TGTTTTGCTTTCCGGGTGT-------TGTCGATGAA------------TGCGG-CAATGACGTCACGATTGATTT--TTCATAA-CAATAAAGCGGCATACCATAATTTTC--C---CCACACCCACAC----CCTCACCCACCCCCACTC-------C-------GCTGTCCTTGAGGTATTGG------GCTTATTAAATGAA---AAT-GAACTGTTTA--TGACCCCGTTTATGAACCGATTC---TG---ATTGCAGGCCGTTTGGGCTGGCTGGGGTCATGCCTCCGAGAACCCTAAGCTGCCGGASizeHit CountTotal NormTotal
No Reads
droTak1
GTGTGAATATTATCTATTT---TGTTTTGCTGTCCGGGTGT-------TGCCG-------------------------ATGACGTCACAATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTCC--C---CCACACCCACTAAAGCCCACTTC------CACTC-------C-------GCTGTCCTTGGGGTATTGG------GCTTATTAAATCAA---AAT-AAACTGATTG--TGAACACTTTT--------TTTC---TG---ATTGCAGGCCGTCTGGGCTGGTTGGGGTCATGCCTCCGAGAATCCCAAGCTGCCGGASizeHit CountTotal NormTotal
No Reads
droEle1
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCG-GTGT-------TGTCGATTCGTGCCGCTTCG---------AATGACGTCACGATTGATTT--TTGCCGA-CCATAAAGCTCC-----ATAATTTAC--C---CCACACCCACAA----CCACAAC------CACTC-------C-------ACTGTCCTTGGGGTATTA---------TTATTAAA-CAA---AATAAAACTGATTG--CGAACG--TTTA-------TTTC---TG---ATTTCAGGCCGTATGGGCTGGCTGGGGTCATGCCTCTGAGAATCCCAAGCTGCCGGASizeHit CountTotal NormTotal
No Reads
droRho1
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCG-GTGT-------TGACGATGAA------------TACGGCCAATGACGTCACGATTGATTT--TTACCGA-CAATAAAGCTCC-----ATAATTTTC--C---CCACACCCACAC----------C------CACTC-------A-------GCTGTCCTTGGGGTATTGG------GCTTATTAAATCAA---ATT-GAACTGATTA--AGAACCCGTTTCTGAACCGTTTC---TG---ATTGCAGGCCGTCTGGGCTGGCTGGGGTCATGCCTCCGAGAATCCAAAGCTGCCTGASizeHit CountTotal NormTotal
No Reads
droFic1
GTGTGAA--TTATCTATTT---T-TTTCGCTATCCG-GCAT-------TGTCGATGAA------------CGCGG-CAATGACGTCACGATTGATTT--TTACCAA-CAATAAAGCTCC-----ATAATTTTC--C---AAACACTCACAC----------C------CACTC-------C-------GCTGTCCTTGGGGTATTGGG-----GCTCATTATATTGA---AAT-GAACTGATTA--TGAACCCGTTTATGAACCGTTTA---TG---ATTGCAGGCTGTGTGGGCTGGTTGGGGTCATGCCTCCGAGAACCCAAAGCTGCCAGASizeHit CountTotal NormTotal
No Reads
droKik1
GTGTGAA--TTATCTATTT---TGTTTTGCTATCCGC------------------------------------GG-CAATGACGTCACAATTGATTT--TTACCCAGCCATAAAGCTCC-----ATAATTGTTACCGCTCCACTC-CGCTT----CCACTAC------CACTC-------C-------AGTGTCCTTGG-GTCTTG-------ACTTATTGAATCAA---CAT-AAACTGATTG--TGAACCAATTTTCTGA---TTTC---TGCCTATTTCAGGCCGTCTGGGCTGGCTGGGGTCATGCTTCCGAGAACCCCAAACTGCCGGASizeHit CountTotal NormTotal
No Reads
droAna3
GTGTGAA--TTATCTATTT---TGTTTTGCCAACCGC-CGTACAATACTTCCATCGAA------------CAGTC-CCCTGACGTCACAATTGATTTTTTTACCGACCAATAAAGCCTC-----ATAATTT-C--C---GCACTCCCACTT----CCACTTCCACCTCCACCTCG-AGTCCACATTTGGGCGTCCCTGG-GTGTTG-------GCTTATTGAATCTAT--TATAGAACTGATTA--TAGAGCA------GAACCCTTGCTGATA---ATTACAGGCTGTGTGGGCCGGCTGGGGTCATGCCTCTGAGAATCCCAAGCTGCCGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................GGGTCATGCCTCTGAGAATCCC...........2211.001010000
...............................................................................................................................................................................................................................................................................................................GTCATGCCTCTGAGAATCCC...........2011.001010000
.............................................................................................................................................................................................................................................................................................CTGTGTGGGCCGGCTGGG...............................1811.001010000
.................................................................................................................................................................................................................................................................................................GTGGGCCGGCTGGGGTCATGC........................2111.001001000
.........................................................................................................................................................................................................................................................................................CAGGCTGTGTGGGCCGGCTGGG...............................2211.001100000
.......................................................................................................................................................................................................................................................................................TACAGGCTGTGTGGGCCGGCTGGGGT.............................2611.001000001
droBip1
GTGTGAA--TTATCTATTT---TGTTTTGCCATCCGG-CGA-------TG-------GTGTCGCT-GGAATGGCC-CCCTGACGTCACAATTGATTT--TTACCGACCAATAAAGTTTC-----ATAATTC-C--C---GCACTCGCACTC----CCACTTC------CACTCCGCA-------GTTGGGTGTCCCTGG-GTGTTG-------GCTTATTGAATCTAGTATATAGAACTGATTA--AGGGTT--C-----------TGCTGATA---ATTACAGGCTGTGTGGGCCGGCTGGGGTCATGCCTCTGAGAACCCCAAGCTTCCGGASizeHit CountTotal NormTotal
No Reads
dp5
GTGTGAA--TTATCTAATTTTTTGTTGTGCTATCAT------------------------------------TCG-CTATGAGGTCA-----------------------TAAAGTGTT-----AT----------------------------------------------------------------------------ATTGGGGCTTCAATTAT-------------------TGATTA--TGGATG--A---------TATTA---TG---ATTACAGGCTGTCTGGGCTGGATGGGGTCATGCCTCGGAGAACCCCAAGTTGCCGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................CTGGGCTGGATGGGGTCAT..........................1914.0040300001000
................................................................................................................................................................................................................................................................................................TCTGGGCTGGATGGGGTCA...........................1913.0030300000000
................................................................................................................................................................................................................................................................................................TCTGGGCTGGATGGGGTC............................1813.0030300000000
................................................................................................................................................................................................................................................................................................TCTGGGCTGGATGGGGTCATG.........................2112.0020200000000
..........................................................................................................................................................................................................................................................................................AGGCTGTCTGGGCTGGATGG................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................GTCTGGGCTGGATGGGGTCA...........................2011.0010100000000
droPer2
GTGTGAA--TTATCTAATTTTTTGTTGTGCTATCAT------------------------------------TCG-CTATGAGGTCA-----------------------TAAAGTGTT-----AT----------------------------------------------------------------------------ATTGGGGCTTCAATTAT-------------------TGATTA--TGGATG--A---------TATTA---TG---ATTACAGGCTGTCTGGGCTGGATGGGGTCATGCCTCGGAGAACCCCAAGTTGCCGGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................GAACCCCAAGTTGCCGGA1814.004400000
...............................................................................................................................................................................................................................................................................................GTCTGGGCTGGATGGGGTC............................1912.002000002
.................................................................................................................................................................................................................................................................................................CTGGGCTGGATGGGGTCA...........................1811.001010000
.................................................................................................................................................................................................................................................................................................................CATGCCTCGGAGAACCCCAAGTTGCC...2611.001100000
...........................................................................................................................................................................................................................................................................................GGCTGTCTGGGCTGGATGGGGTCA...........................2411.001000001
.........................................................................................................................................................................................................................................................................................CAGGCTGTCTGGGCTGGATGGG...............................2211.001100000
droWil2
TTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG---TTTCTAGGCCGTTTGGGCTGGTTGGGGTCATGCCTCAGAGAATCCGAAATTACCTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................AGAGAATCCGAAATTACCT..1915.00500050
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCATGCCTCA....................2715.00500131
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTCA....................2414.00410030
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCATGCCTC.....................2413.00300030
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCAT..........................2112.00200020
...........................................................................................................................................................................................................................................................................................GGCCGTTTGGGCTGGTTGGG...............................2012.00200020
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCATGC........................2112.00200110
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCATGCCTCA....................2512.00200020
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCATGCCTCAGA..................2712.00200020
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCATGCCTC.....................2612.00200020
..........................................................................................................................................................................................................................................................................................................................GAGAATCCGAAATTACCT..1812.00200020
..............................................................................................................................................................................................................................................................................................CGTTTGGGCTGGTTGGGGTCATGCCTC.....................2711.00100010
..........................................................................................................................................................................................................................................................................................................................GAGAATCCGAAATTACCTGA2011.00100100
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGC........................2011.00100010
......................................................................................................................................................................................................................................................................................................................CTCAGAGAATCCGAAATTAC....2011.00100010
...............................................................................................................................................................................................................................................................................................................GTCATGCCTCAGAGAATCCGAA.........2211.00100010
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCA...........................1811.00100010
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCATGC........................2311.00100010
...............................................................................................................................................................................................................................................................................................................GTCATGCCTCAGAGAATCCGA..........2111.00100010
.............................................................................................................................................................................................................................................................................................CCGTTTGGGCTGGTTGGGGTC............................2111.00100010
...........................................................................................................................................................................................................................................................................................GGCCGTTTGGGCTGGTTGGGGTCATGCCTC.....................3011.00100010
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTC.....................2311.00100010
......................................................................................................................................................................................................................................................................................................CTGGTTGGGGTCATGCCTCA....................2011.00100010
..................................................................................................................................................................................................................................................................................................TGGGCTGGTTGGGGTCATGCCTCAGA..................2611.00100010
.............................................................................................................................................................................................................................................................................................CCGTTTGGGCTGGTTGGG...............................1811.00100010
................................................................................................................................................................................................................................................................................................TTTGGGCTGGTTGGGGTCATGCCTCA....................2611.00100100
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCATGCCT......................2511.00100010
...............................................................................................................................................................................................................................................................................................GTTTGGGCTGGTTGGGGTCATGCC.......................2411.00100010
.............................................................................................................................................................................................................................................................................................................GGGTCATGCCTCAGAGAATCC............2111.00100010
....................................................................................................................................................................................................................................................................................................GGCTGGTTGGGGTCATGCCTC.....................2111.00100010
.................................................................................................................................................................................................................................................................................................TTGGGCTGGTTGGGGTCATGCCTCAGAGA................2911.00100100
..........................................................................................................................................................................................................................................................................................AGGCCGTTTGGGCTGGTTGGG...............................2111.00100010
droVir3
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC---TT---TCTGCAGGCTGTGTGGGCTGGCTGGGGTCATGCGTCGGAAAATCCCAAACTGCCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................GCTGGGGTCATGCGTCGG...................1811.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTGTGGGCTGGCTGGGGTC............................1911.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ATCCCAAACTGCCGGA1611.001000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................................................................................GGTCATGCGTCGGAAAATCCCAAA........2411.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGTGTGGGCTGGCTGGGGT.............................1911.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................ATGCGTCGGAAAATCCCAAACTGCCGGA2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................GTCATGCGTCGGAAAATCCCAA.........2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATGCGTCGGAAAATCCCAAACT......2211.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................TGCAGGCTGTGTGGGCTGGCTGGGGTC............................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAGGCTGTGTGGGCTGGCTGGG...............................2311.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................GTGGGCTGGCTGGGGTCATGC........................2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................GCTGTGTGGGCTGGCTGGGGTCATG.........................2511.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................TGCAGGCTGTGTGGGCTGGC...................................2011.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TG---TATACAGGCCGTGTGGGCGGGCTGGGGTCATGCATCGGAGAATCCCAAATTGCCGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................GTCATGCATCGGAGAATCCC...........2011.001000001
.............................................................................................................................................................................................................................................................................................................GGGTCATGCATCGGAGAAT..............1911.001000001
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCGGGCTGGG...............................1911.001100000
............................................................................................................................................................................................................................................................................................GCCGTGTGGGCGGGCTGGGA..............................2011.001001000
..................................................................................................................................................................................................................................................................................................TGGGCGGGCTGGGGTCATGCATCG....................2411.001000100
droGri2
CTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTT---TA---ATTATAGGCCGTCTGGGCGGGTTGGGGCCATGCATCGGAGAATCCCAAATTGCCGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 04:05 PM