ID:

dsi_13863

 Coordinate:

2l:10641602-10641751 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.4 -29.1 -29.0

Flybase annnotation

exon [2l_10641401_10641601_-]; CDS [2l_10641401_10641601_-]; intron [2l_10641602_10642307_-]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
mature
  1. dsi_13863  2l:10641683-10641705 -
  2. 2l:21928330-21928352 +
  3. 2l:21968213-21968235 +
  4. 3l:20309192-20309214 -
  5. 3l:23893096-23893118 -
  6. 4:697357-697379 +
star

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCGGTTTTCAGTTGTTAGAGTGGACGTGTCAACATGGGTCAACAAACTTGCGCTGCCTCTAGAATCTGTGAGCTTAATCTTAATCTTCTAGCTTTTATAGTTCCTGAGATCGAGGCGTTCAGGCGGACATGGTCATTTTGATTTTGGTGATACGTACTATAAAGGCGCACGCCCATAAAAATTTAATGTTTAATTAACAGGCTTATGCGTGCCATGAGTAGTTATACGCGAATGAACCCCAAACAACGCA
**************************************************.(((((..((((((....((((......))))...))))))(((((((((((((((((((((((((((((....))))...)))...)))))))))).)).....)))))))))).))).))..............((((.....)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
................................................................................................ATAGTTCCTGAGATCGAGGCGTT................................................................................................................................... 23 0 6 6.83 41 12 8 11 0 4 5 0 1
............................TCAACATGGGTCAACAAACTT......................................................................................................................................................................................................... 21 0 2 3.00 6 0 0 0 6 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGCGTTC.................................................................................................................................. 24 0 5 2.40 12 6 2 1 0 1 1 1 0
................................................................................................ATAGTTCCTGAGATCGAGGCGTTCA................................................................................................................................. 25 0 5 2.20 11 7 2 0 0 2 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGCGT.................................................................................................................................... 22 0 7 1.43 10 4 2 1 0 0 0 2 1
..............................................................................................................................................................................................................................TATACGCGAATGAACCCCAAACAA.... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................AACTTGCGCTGCCTCTAGAATCTGT..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0
.......................................................................................................CTGAGATCGAGGCGTTCAGGCGG............................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................ACTTGCGCTGCGTCTAGAATATG...................................................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 1 0 0 0
.................................................................................................................................................................................................................TGCCATGAGTAGTTATACGCGAAT................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0
............TGTTAGAGTGGACGTGTCAAC......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0
................................................................................................ATAGTTCCTGAGATCGAGGCGTTCAA................................................................................................................................ 26 1 5 0.40 2 2 0 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGCGTTCT................................................................................................................................. 25 1 5 0.40 2 1 0 1 0 0 0 0 0
..............................................................................CTTAATCTTCTAGCTTT........................................................................................................................................................... 17 0 5 0.40 2 0 2 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAAATCGAGACGTTCAGGC.............................................................................................................................. 28 2 3 0.33 1 0 1 0 0 0 0 0 0
....................................................................................................TTCCTGAGATCGAGGCGTTCA................................................................................................................................. 21 0 10 0.30 3 1 0 2 0 0 0 0 0
...................................................................................TCTTCTAGCTTTTATAGTTCCTGAGA............................................................................................................................................. 26 0 4 0.25 1 0 0 0 0 0 0 0 1
............................................................................................TTTTATAGTTCCTGAGATCGAGGCGT.................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................ATAGTTCCTGCGATCGAGGTGTCCA................................................................................................................................. 25 3 8 0.25 2 0 0 0 0 2 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGC...................................................................................................................................... 20 0 8 0.25 2 0 2 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGCG..................................................................................................................................... 21 0 8 0.25 2 1 0 0 0 0 1 0 0
.................................................................................AATCTTCTAGCTTTTATAGTTCCTGA............................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 0 0 0 1
............................................................................................TTTTATAGTTCCAGAGATCGAGGC...................................................................................................................................... 24 1 5 0.20 1 0 0 0 0 0 0 0 1
................................................................................................ATAGTTCCTGAGATCGAGGCGTTCAC................................................................................................................................ 26 1 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................................TATAGTTCCTGAGATCGAGGCGTT................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0
................................................................................................ATAGTTCCTTATATCGAGGCGTTCA................................................................................................................................. 25 2 6 0.17 1 0 0 1 0 0 0 0 0
............................................................................................TTTTATAGTTCCTGAGATCGAG........................................................................................................................................ 22 0 20 0.15 3 0 2 0 0 0 0 1 0
................................................................................................ATAGTTCTTGAGATCGAGGCGTT................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0 0
..............................................................................................TTATAGTTCCTGAGATCGAGGCGT.................................................................................................................................... 24 0 7 0.14 1 0 1 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAAGCGTTC.................................................................................................................................. 24 1 7 0.14 1 0 1 0 0 0 0 0 0
..............................................................................................TTATAGTTCCTGAGATCGAGGC...................................................................................................................................... 22 0 7 0.14 1 0 0 0 0 0 1 0 0
........................................................................................TAGCTTTTATAGTTCCTGAGATCGA......................................................................................................................................... 25 0 16 0.13 2 0 0 0 0 1 0 0 1
................................................................................................ATAGTTCCTGCGATCGAGGTGTGCA................................................................................................................................. 25 3 8 0.13 1 0 0 0 0 0 0 1 0
................................................................................................ATAGTTCCTGAGATCGAGGCGAT................................................................................................................................... 23 1 9 0.11 1 0 0 1 0 0 0 0 0
...................................................................................................GTTCCTGAGATCGAGGCGTT................................................................................................................................... 20 0 9 0.11 1 0 0 0 0 0 1 0 0
...................................................................................TCTTCTGGCTTTTATAGTTCCTGATA............................................................................................................................................. 26 2 10 0.10 1 0 0 0 0 0 0 0 1
................................................................................................ATAGTTTCTGAGATCGAGGCG..................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGCGC.................................................................................................................................... 22 1 11 0.09 1 0 0 1 0 0 0 0 0
......................................................................................TCTAGCTTTTATAGTTCCTGAGATCGA......................................................................................................................................... 27 0 11 0.09 1 0 0 1 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGG....................................................................................................................................... 19 0 11 0.09 1 0 1 0 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGAGGG...................................................................................................................................... 20 1 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................ATAGTTTCTGAGATCGAGGCGA.................................................................................................................................... 22 2 13 0.08 1 0 0 1 0 0 0 0 0
................................................................................................ATAGTTCCTGAGATCGATTCGTTCA................................................................................................................................. 25 2 16 0.06 1 0 0 0 0 0 1 0 0
.......TCAGTTGTTAGAGCG.................................................................................................................................................................................................................................... 15 1 16 0.06 1 0 0 0 0 0 0 0 1
.......TCAGTGGTTAGAGCGGGC................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................TTCTAGCTTTTATAGTTCCTGAGA............................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 1
...GTATTCAGTTGCTAGAG...................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 1
.................................................................................................TAGTTCCTGAGATCGAG........................................................................................................................................ 17 0 20 0.05 1 0 1 0 0 0 0 0 0
................................................................................................................AGGCGTCCAGGCGGGC.......................................................................................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0
...GTATTCAGTTGTCAGAG...................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

CGCCAAAAGTCAACAATCTCACCTGCACAGTTGTACCCAGTTGTTTGAACGCGACGGAGATCTTAGACACTCGAATTAGAATTAGAAGATCGAAAATATCAAGGACTCTAGCTCCGCAAGTCCGCCTGTACCAGTAAAACTAAAACCACTATGCATGATATTTCCGCGTGCGGGTATTTTTAAATTACAAATTAATTGTCCGAATACGCACGGTACTCATCAATATGCGCTTACTTGGGGTTTGTTGCGT
**************************************************.(((((..((((((....((((......))))...))))))(((((((((((((((((((((((((((((....))))...)))...)))))))))).)).....)))))))))).))).))..............((((.....)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M023
head
 SRR902009
testis
 M053
female body
 O001
Testis
..................................................................................TAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 24 0 5 5.80 29 15 0 3 4 4 3 0 0 0 0 0
.............................................................................................................ATCTCCGCAAGTCCG.............................................................................................................................. 15 1 4 4.25 17 4 3 5 2 0 3 0 0 0 0 0
.................................................................................TTAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 25 0 5 3.60 18 13 1 1 1 0 2 0 0 0 0 0
..........................................................................................CGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 24 0 20 3.25 65 29 1 32 0 0 3 0 0 0 0 0
......................................................................................AGATCGAAAATATCAAGGACTCTAG........................................................................................................................................... 25 0 20 2.85 57 0 48 0 8 1 0 0 0 0 0 0
.......................................................................................................GACTGAATCTCCGCAAGTC................................................................................................................................ 19 3 17 1.65 28 0 0 0 7 0 2 10 7 0 0 2
...............................................................................................................CTCCGCAAGTCCGTAT........................................................................................................................... 16 2 20 1.50 30 2 16 10 2 0 0 0 0 0 0 0
...................................................................................AGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 23 0 6 1.17 7 3 0 0 0 2 2 0 0 0 0 0
....................................................................................GAAGATCGAAAATATCAAGGAC................................................................................................................................................ 22 0 20 1.10 22 0 5 0 6 10 0 0 0 0 1 0
.............................................................................................................ATCTCCGCAAGTCCGC............................................................................................................................. 16 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.........................................................................................TCGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 25 0 17 1.00 17 9 0 5 2 0 1 0 0 0 0 0
..............................................................................................................GCTCCGCAAGTCCGTA............................................................................................................................ 16 2 20 0.80 16 0 16 0 0 0 0 0 0 0 0 0
........................................................................................ATCGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 26 0 15 0.80 12 4 0 7 1 0 0 0 0 0 0 0
................................................................................AATAGAAGATCGAAAGTATCAAGGAC................................................................................................................................................ 26 2 4 0.75 3 0 0 0 0 3 0 0 0 0 0 0
...................................CCCAGTCGTTTGAACGCGACGGA................................................................................................................................................................................................ 23 1 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0
............................AGTTGTACCCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAGATAGAAAATATCAAAGACTCTAGCTCCG...................................................................................................................................... 31 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................ATTAGAAGATCGAAAAAATCAAGGAC................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................AAGATCGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 29 0 4 0.50 2 1 0 0 1 0 0 0 0 0 0 0
......................................................................................AGATCGAAAATATCAAGGACTCTAGCT......................................................................................................................................... 27 0 11 0.45 5 0 0 0 2 0 0 0 0 2 1 0
.........................................................................................TCGAAAATATCAAGGAC................................................................................................................................................ 17 0 20 0.40 8 0 0 8 0 0 0 0 0 0 0 0
......................................................................................................GGACTGAATCTCCGCAAGTC................................................................................................................................ 20 3 5 0.40 2 0 0 0 0 0 0 2 0 0 0 0
........................................................................................ATCGAAAATATCAAGGAC................................................................................................................................................ 18 0 20 0.35 7 3 4 0 0 0 0 0 0 0 0 0
........................................................................................ATCGAAAATATCAAGGACTCTAG........................................................................................................................................... 23 0 20 0.35 7 0 7 0 0 0 0 0 0 0 0 0
............................AGTTGTACTCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
........................GCACAGTTGTACCCAG.................................................................................................................................................................................................................. 16 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................CCTATCTCCGCAAGTCCG.............................................................................................................................. 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................CGAAAATATCAAGGACTCTAGCTCCG...................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0
..............................TTGTACCCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 24 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0 0
.........................................................................................TCGAAAATATCAAGGACTCTAG........................................................................................................................................... 22 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0 0
.....................................................................................AAGATCGAAAATATCAAGGAC................................................................................................................................................ 21 0 20 0.30 6 4 0 0 2 0 0 0 0 0 0 0
.................................................................................TCAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 25 1 7 0.29 2 0 0 0 1 1 0 0 0 0 0 0
............................AGTTGTACTCAGTTGTTTGAACGCGG.................................................................................................................................................................................................... 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................CGAACGTATCAAGGATTCTAGCTCCGCAA................................................................................................................................... 29 3 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
......................................................................................AGATCGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 28 0 10 0.20 2 1 0 1 0 0 0 0 0 0 0 0
.................................................................................TTAGAAGATCGAAAATATCAAGGACT............................................................................................................................................... 26 0 5 0.20 1 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................CTCCGCAAGTCCGTATGTG........................................................................................................................ 19 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..........................AAAGTTGTACCCAGTTGT.............................................................................................................................................................................................................. 18 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................ATTAGAAGATCGAGAATATCAAGGAC................................................................................................................................................ 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................TAGAAGATCCAAAATATCAAGGAC................................................................................................................................................ 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................TAGAAGATAGTAAATATCAAGGAC................................................................................................................................................ 24 2 13 0.15 2 0 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................................TTGCCGCGAGCGGGTA.......................................................................... 16 2 20 0.15 3 0 0 0 1 0 2 0 0 0 0 0
.....................................................................................AAGATCGAAAATATCAAGGACTCTAG........................................................................................................................................... 26 0 20 0.15 3 0 0 0 0 2 1 0 0 0 0 0
.........................................................................................................................................................................................................................................CTAGGGGTTTGTTGCGT 17 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................GCTCCGCAAGTCCGT............................................................................................................................. 15 1 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................TAGGAGATCGAAAATATCAAGGAC................................................................................................................................................ 24 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................AAAAATATCAAGGACTCTAGCTCCGC..................................................................................................................................... 26 1 7 0.14 1 0 0 0 1 0 0 0 0 0 0 0
..................................................................................TAGAAGATCGAAAATATCAAGGAG................................................................................................................................................ 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................ATCGAAAATATCAAGGACTCTAGCT......................................................................................................................................... 25 0 16 0.13 2 0 2 0 0 0 0 0 0 0 0 0
................................................................................TTTAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 26 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................TTTAGAAGGTCGAAAATATCAAGGAC................................................................................................................................................ 26 2 16 0.13 2 0 0 0 0 2 0 0 0 0 0 0
.................................................................................ATAGAAGATAGTAAATATCAAGGAC................................................................................................................................................ 25 3 17 0.12 2 0 0 0 0 2 0 0 0 0 0 0
.................................................................................ATAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 25 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0 0
...........................CAGTTGTACCCAGTTGCT............................................................................................................................................................................................................. 18 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................AGAAGATCGAAAATGTCAAGGACTCT............................................................................................................................................. 26 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................AAATTAGAAGATCACAAATATCAAGGAC................................................................................................................................................ 28 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................GATCTCCGCAAGTCCG.............................................................................................................................. 16 2 20 0.10 2 0 1 1 0 0 0 0 0 0 0 0
...............................................................................................................CTCCGCAAGTCCGCA............................................................................................................................ 15 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
......................................AGTTGTTTGAACGCGA.................................................................................................................................................................................................... 16 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
......................................................................................AGATCGAAAATATGAAGGACTCTAGCTC........................................................................................................................................ 28 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0
............................AATTGTACCCAGTTGTTTAAACGCGA.................................................................................................................................................................................................... 26 2 12 0.08 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................GATCGAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 27 0 12 0.08 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................TTAGAAGATAGTAAATATCAAGGAC................................................................................................................................................ 25 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................TAGAAGGTCGAAAATATCAAGGAC................................................................................................................................................ 24 1 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................CAAGGACTCTAGCTCCG...................................................................................................................................... 17 0 14 0.07 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................ATAGAAGATAGTAAATATCAAGGACT............................................................................................................................................... 26 3 15 0.07 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................TCAGTAGATCGAAAATATCAAGGAC................................................................................................................................................ 25 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................TATAGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 26 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................ATAGAAGGTCGAAAATATCAAGGAC................................................................................................................................................ 25 2 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................TCGAAAATATCAAGGACTCTAGCT......................................................................................................................................... 24 0 18 0.06 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................ATCGAAAATATCAAGGACTGTAGCT......................................................................................................................................... 25 1 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................ATTTGAAGATCGAAAATATCAAGGAC................................................................................................................................................ 26 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0
...............................TGTACCCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................CAGTAGATCAAAAATATCAAGGAC................................................................................................................................................ 24 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
................................GTACCCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................TCAGTAGATCAAAAATATCAAGGAC................................................................................................................................................ 25 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................GAAGATCGAAAATATCAAGGAG................................................................................................................................................ 22 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................TCGAAAATATCAAGGACTCTAGCTA........................................................................................................................................ 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................CGAAAATATCAAGGACTCTAGCTG........................................................................................................................................ 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...................................................CGACGGAGAACTTAGGCGC.................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................GAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 23 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................ATATCAAGGACTCTAGCT......................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................CGAAAATTTCAAGGACTCTAGCTC........................................................................................................................................ 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...................................CCCAGTTGTTTGAACGCGA.................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................ATCGAAAATATCAAGGACTCT............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................AAAAGATCGAAAATATCAAGGAC................................................................................................................................................ 23 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................................CCCCGCTCCGCAAGTCCG.............................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................TCGAAAATATCAAGGA................................................................................................................................................. 16 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
....................................CCAGTTGTTTGAACGC...................................................................................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................CGAAATATCAAGGACTCTAGCTC........................................................................................................................................ 23 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
..................................ACCCAGTTGTTTGAACGCGAC................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................TCAAAAATATCAAGGACTCTAGCTC........................................................................................................................................ 25 1 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................ATCAAGGACTCTAGCT......................................................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................GAAGATCGAAAATATCAAGGA................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...............................TGTACCCAGTTGTTTGA.......................................................................................................................................................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................TCGAAAATATCAAGGACTCT............................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCACGGTCCTCATCTA........................... 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:10641552-10641801 - dsi_13863 GC------------GGTTTTCAGTTGTTAGAGTGG-ACGTGTCAACATGG-GTCAACAAACTTGCGCTGC--------CTCTAGAATCTGTGAGCTTA--------ATCTTAATCTTCTAGCTTTTATAGTTCCTGAGATCG-AGGCGTTCAGG----------------------------CGGACATGGTCATTT---------TGATTTTG---GTGATACG--------------------------TAC-------------TATAAAGGCGCACGCCCA----T-----------------------------------------------------------AAAAATTTAATGTTTA-----------ATTAACAGGCTTATGCGTGCCATGAGTAGTTATACGCGAATGAACCCCAAACAACGCA
droSec2 scaffold_3:6385275-6385532 - dse_1199 GC------------GGTTTTCAGTTTTTAGAGTGG-ACGTGTCAACATGG-GTCAACAAACTTGCGCAGCGCCTATGCCTCTAGAATCTGTGAGCTTA--------ATCTTAATCTTCTAGCTTTTATAGTTCCTGAGATCG-AGGCGTTCAGG----------------------------CGGACATGGCCATTT---------CGATTTTG---GTGATACG--------------------------TAC-------------TATAAAGGCGCACGCCCA----T-----------------------------------------------------------AAAAATTTAATGTTTA-----------ATTAACAGGCTTATGCGTGCCATGAGTAGTTATACGCGAATGAACCCCAAACAACGCA
dm3 chr3R:19126-19390 - GC------------AGTATGTGGGCATTATAGTGGGGCGTCACAACGTGT-CTCAACAAACTTGCGCCGTATCTATGTTTCTAGAATCTGTATGTTCAACTATTGTATCTTAACCTTCAAGCTTTTATAGTTCCTGAGATGT-CGACGTGTATACGG------------ACAGA--------CGTACATGGCCAGAT---------CGACTCGGCTATTGATCCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------ATATACTTCATATGGT-----------CTGAAATGCCTTTTTCACTCTACGAGTAAAAAAACATGTATGAAC-------------
droEre2 scaffold_4845:6637410-6637613 + GC------------GGCTTGTGGGCTTAGTACTGG-GCGTGGCAACATTTGGACAACAAACTTCCTCT------------CTGGAAGCAGCGTGCTGT-----TG-AGATTAACATTCTAGCTTTTGTAGTTCCTGAGATCG-AGGCGTTCATACGG------------ACAGT--------TTGACATGGCCAGAT---------CGACTCGGTTATTGATCCTGATC----------AAGAATA----------------T-------------A-------------------------------------------------------------------------TATACTTTGTATTAT-----------ATTAACAGGCTT----------------------------------------------
droYak3 v2_chr2L_random_010:457326-457527 - GC------------GGTTTGTGGGCGTTAGAGTGG-GCGTGGCAACATGG-GTCAACAAACTTGCGCTGA------GTCTCTTGAGTCCGCATGCAGC--------ATCTCAACTTTTAATCTTTTATAGTTAC-------------GAACCAACGG------------A------------CGGACATCGATT---TCAACGAATCGATTT------------CAAAGA-------------------------------------------------------------------------------------------------------ACGGGTATAAC--ATG--AAATTCGATTCTTAATAA---------TGACCCGTTCATGAGTAT------------------------------------CA
droEug1 scf7180000409126:3562-3787 + TTTCAGTTTTTCGTGAATTATGGGCGTTGTAATGG-TCATGGCAG---------GATAAACTTACGCTGCGTAAGGACCTC-AAAATCTGC----TTA--------ATCTCAACTTTGTATCTCTTATAGTTTCTGAGATCT-CAGCGGTCATTCTG------------ACAGACGGACGG------A-----------------------CGGCTATTGATACTGATA----------AAACATA----------------A-------------A-------------AGGGTCGGAAAC------------------------------AAAGGCTA--------TAAAAGTCTTGTACTGC-----------ATAA---AGCTTATGCATG---------------------------------------
droBia1 scf7180000302142:58091-58299 + GC------------GGATTGTGGGCGTTAGAGTGG-GCGCGGCACCCCGC-TGAAATAAACTTGCGCTGCATAGGAAGCCCAGGAATCTGCATGCCTA--------GTTTGACTGTTTTAGCTCTTATAGTTTCCGAGATCT-CAGCGTTCATACGG------------ACGGA--------CGGACATGGCTAGAT---------CGACTCGTCTAGTGATGTTTG--------------------------C----GTTGCAAACCCT----CTGCAAGAT-------------------------------------------------------------------------------------------------------------------------------------------TATAAAAATGTA
droTak1 scf7180000414023:28755-29102 - GG------------CGATTGTGGGCGTTAGAGGGG-GCGTGGCGCTCGTA-TGAAATAAACTTGCGTTGCGTAGGAGGCCTAAGAATATGTGTGGGAA--------ATCTTAACCTTCTAGCTTTTGTAGTTTCCGAGATCTTTCGCGTTCATACGGACAGACAGACGAACAGA--------CGGACATGGCTATAT---------CGACTCGGCTAGTGACCCTGATC----------AAGAATA----------------T-------------ATATACT--TTAT-AGGGTCGGAAATGCTTCCTTCTAGCTGTTACATACTTTATATAACGGGTATAATATATG--AAACTGGTAT---AATAATTAATTTATTAACAGACTTATGAGATCTATGCATGGGTACACGCGAATGAATCCCAAGCAACGCA
droEle1 scf7180000490790:4813-5026 - GC------------GACTTGTGGGCGATAGAGTAC-GCGTTGCCAC-----GTTAATAAAATTGCGTTGCTTAAAAGTTACTAGAATCTGCATTTTAA--------ATCTCAATTTTCTTGCTTTTATAGTTTACAAGTTCT-TGACGTTTATACAG------------A------------CGGACATGGCGA---------------------------TCCTGAAAAAGTTTTATCGCTTGTAATGGGCACTGGA------------ATAACAAAACACCAA----A-----------------------------------------------------------AAAAACTTTTTTTGTA-----------AT--------------------------------------------------------
droRho1 scf7180000776683:2787-2986 + GC------------G-----------TTAAAGGGG-GCGTGGCACCTTTT-TGAAACAAACTTGCGCTGCGTAGGAACTCCTAGAATCTGCATGCAAA--------ATGCCAATCTTCTAGCTTTAATAGTTTCCGAGATCT-CAGCGTTCATACGG------------ACT------------ACTAT---TTTTTCCACTTTGTCGAATT------------TTTAAAA------------A-------TAT-------------TATAAAT-------------------------------------------------------------------------TTAAAATTTTTATTTTTT-----------GT----TGGTTC-----------------------------------------ATGCG
droFic1 scf7180000453495:181637-181773 - GC------------AGCTTGTTGGCGTAATAATGG-GCGTGGCAAAACAA-TTTAACAAACTTGCACTGCGTAAGAATAATAAGTATCTACAGTTTTA--------ATCCCAATATTCTAGTTCCTGCAGTTCCCGAGACCT-CGACTTTAATACGG------------ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302472:2320463-2320532 - AT------------TTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTT-----------TTAAACAGACTAATGCGTGCCATGTCTGAGCATACTCGTATGAACCCAGATCGCCGCA
droAna3 scaffold_12916:14846403-14846488 - AT------------AAGAAAATGATATTAAACTAA------TTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAAGATTAATGCGCGCCATGTCGGAACATACTCGAATGAATCCCGACCGACGCA
droBip1 scf7180000393278:7980-8151 - A------------------------------------------------------ACAAACTTGAACTGCGTGGGCATTATAGCAGTCTCCATGTCAA--------ATGCTACAGCTGTATCTCTTGTAGTCTCTGAGATCC-ACGCGATCATACGG------------ACAGACTGGCAGACGGACATGGCTATAT---------AGACTTGGCTGTTGATGCTGATC----------AAAAATA----------------A-------------ATATA--------T-----------------------------------------------------------ATACATTCAATGT------------------------------------------------------------------------
dp5 4_group1:3640936-3641000 + TT------------ACTCTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGATTCATGAAAGCAATGAGCGAGTTTACCAGATTGAATCCGGACCGTCGCA
droPer2 scaffold_5:1571455-1571519 - TT------------ACTCTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGATTAATGAAAGCAATGAGCGAGTTTACCAGATTGAATCCGGACCGTCGCA
droWil2 scf2_1100000004521:4697151-4697204 - AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACTTATGCGTGCCATGTCGGACTATACGCGTATGAAACCTAATCGACGCA
droVir3 scaffold_12963:922848-922921 - AA------------TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATGAA-------A--TCGTTTCAGTTTCATGCGTGCATTAGCGAATCATACACGCATGAATCCAGGCAGACGAA
droMoj3 scaffold_6500:27632860-27632920 - TT------------TATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGTCTCATGCGTGCTATGTCGAATCATACACGAATGAATCCCGAAAGACGTA
droGri2 scaffold_15252:2072868-2072919 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTATGCGCGCGATGTCCAATCATACACGCATGAATCCAAGCAGACGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GC------------GGTTTTCAGTTGTTAGAGTGG-ACGTGTCAACATGG-GTCAACAAACTTGCGCTGC--------CTCTAGAATCTGTGAGCTTA--------ATCTTAATCTTCTAGCTTTTATAGTTCCTGAGATCG-AGGCGTTCAGG----------------------------CGGACATGGTCATTT---------TGATTTTG---GTGATACG--------------------------TAC-------------TATAAAGGCGCACGCCCA----T-----------------------------------------------------------AAAAATTTAATGTTTA-----------ATTAACAGGCTTATGCGTGCCATGAGTAGTTATACGCGAATGAACCCCAAACAACGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTT............................................................................................................................................................................................................................................................................................2366.83410000000541801211000
.........................................TCAACATGG-GTCAACAAACTT...................................................................................................................................................................................................................................................................................................................................................................................2123.00600006000000000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTC...........................................................................................................................................................................................................................................................................................2452.401200000011102061000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTCA..........................................................................................................................................................................................................................................................................................2552.201100000000202070000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGT.............................................................................................................................................................................................................................................................................................2271.431000000020012041000
......................................................................................................................................................................................................................................................................................................................................................................................................................TATACGCGAATGAACCCCAAACAA....2411.00100000000000010000
..........................................................AACTTGCGCTGC--------CTCTAGAATCTGT.......................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.....................................................................................................................................CTGAGATCG-AGGCGTTCAGG----------------------------CGG.........................................................................................................................................................................................................................................................2311.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................TGCCATGAGTAGTTATACGCGAAT.................2411.00100000000001000000
........................TGTTAGAGTGG-ACGTGTCAAC....................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTCAA.........................................................................................................................................................................................................................................................................................2650.40200000000000020000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTCT..........................................................................................................................................................................................................................................................................................2550.40200000000000011000
............................................................................................................CTTAATCTTCTAGCTTT.....................................................................................................................................................................................................................................................................................................................1750.40200000000002000000
..................................................................................................................................TTCCTGAGATCG-AGGCGTTCA..........................................................................................................................................................................................................................................................................................21100.30300000000000012000
.................................................................................................................TCTTCTAGCTTTTATAGTTCCTGAGA.......................................................................................................................................................................................................................................................................................................2640.25100000000010000000
..........................................................................................................................TTTTATAGTTCCTGAGATCG-AGGCGT.............................................................................................................................................................................................................................................................................................2640.25100000000001000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGC...............................................................................................................................................................................................................................................................................................2080.25200000000002000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCG..............................................................................................................................................................................................................................................................................................2180.25200000001000010000
...............................................................................................................AATCTTCTAGCTTTTATAGTTCCTGA.........................................................................................................................................................................................................................................................................................................2650.20100000000010000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTCAC.........................................................................................................................................................................................................................................................................................2650.20100000000000010000
.............................................................................................................................TATAGTTCCTGAGATCG-AGGCGTT............................................................................................................................................................................................................................................................................................2460.17100000000000010000
..........................................................................................................................TTTTATAGTTCCTGAGATCG-AG.................................................................................................................................................................................................................................................................................................22200.15300000010002000000
............................................................................................................................TTATAGTTCCTGAGATCG-AGGCGT.............................................................................................................................................................................................................................................................................................2470.14100000000001000000
............................................................................................................................TTATAGTTCCTGAGATCG-AGGC...............................................................................................................................................................................................................................................................................................2270.14100000001000000000
......................................................................................................................TAGCTTTTATAGTTCCTGAGATCG-A..................................................................................................................................................................................................................................................................................................25160.13200000000110000000
.................................................................................................................................GTTCCTGAGATCG-AGGCGTT............................................................................................................................................................................................................................................................................................2090.11100000001000000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGC.............................................................................................................................................................................................................................................................................................22110.09100000000000001000
....................................................................................................................TCTAGCTTTTATAGTTCCTGAGATCG-A..................................................................................................................................................................................................................................................................................................27110.09100000000000001000
..............................................................................................................................ATAGTTCCTGAGATCG-AGG................................................................................................................................................................................................................................................................................................19110.09100000000001000000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGG...............................................................................................................................................................................................................................................................................................20120.08100000000001000000
...................................................................................................................TTCTAGCTTTTATAGTTCCTGAGA.......................................................................................................................................................................................................................................................................................................24200.05100000000010000000
...............................................................................................................................TAGTTCCTGAGATCG-AG.................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
GC------------GGTTTTCAGTTTTTAGAGTGG-ACGTGTCAACATGG-GTCAACAAACTTGCGCAGCGCCTATGCCTCTAGAATCTGTGAGCTTA--------ATCTTAATCTTCTAGCTTTTATAGTTCCTGAGATCG-AGGCGTTCAGG----------------------------CGGACATGGCCATTT---------CGATTTTG---GTGATACG--------------------------TAC-------------TATAAAGGCGCACGCCCA----T-----------------------------------------------------------AAAAATTTAATGTTTA-----------ATTAACAGGCTTATGCGTGCCATGAGTAGTTATACGCGAATGAACCCCAAACAACGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTC...........................................................................................................................................................................................................................................................................................2450.6033000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGT.............................................................................................................................................................................................................................................................................................2250.4020020
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTT............................................................................................................................................................................................................................................................................................2350.2011000
..............................................................................................................................ATAGTTCCTGAGATCG-AGGCGTTCA..........................................................................................................................................................................................................................................................................................2550.2011000
...............................................................................................................................TAGTTCCTGAGATCG-AGGCGTTC...........................................................................................................................................................................................................................................................................................2360.1711000
......................................................................................................................TAGCTTTTATAGTTCCTGAGATCG-AG.................................................................................................................................................................................................................................................................................................2690.1110010
..........................................................................................................................TTTTATAGTTCCTGAGATCG-AG.................................................................................................................................................................................................................................................................................................22160.0610001
...........................................................................................................................TTTATAGTTCCTGAGATCG-AG.................................................................................................................................................................................................................................................................................................21180.0610001
...........................................................................................................................TTTATAGTTCCTGAGATCG-A..................................................................................................................................................................................................................................................................................................20200.0510100
dm3
GC------------AGTATGTGGGCATTATAGTGGGGCGTCACAACGTGT-CTCAACAAACTTGCGCCGTATCTATGTTTCTAGAATCTGTATGTTCAACTATTGTATCTTAACCTTCAAGCTTTTATAGTTCCTGAGATGT-CGACGTGTATACGG------------ACAGA--------CGTACATGGCCAGAT---------CGACTCGGCTATTGATCCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------ATATACTTCATATGGT-----------CTGAAATGCCTTTTTCACTCTACGAGTAAAAAAACATGTATGAAC-------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGACGT.............................................................................................................................................................................................................................................................................................261716.0071600000000000000000000005100000000000020501020803060100500000000000000000000000000000000000000000000000000000000000000000000000000000001000000002133294711151613110145100000000000000000000000000000000003320224106035000001400003040002001140170162489100000000110100000000000000000000000000000000000000000000000440000071312000000529170000000000000041226000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGACG..............................................................................................................................................................................................................................................................................................251345.0034500000000000000000000001000000000000000202100300020102000000000000000000000000000000000000000000000000000000000001000000000000000000000000000024045561160713116000000000000000000000000000000000204010000700000140000000000000151103311810510000000001010000000000000000000000000000000000000000000000092000036010000001335000000000000001101000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGACGTG............................................................................................................................................................................................................................................................................................271330.0033000000000000000000000002000000000000000202010000020104100000000000000000000000000000000000000000000000000000000000000000000000000000000000000049162471413043610000000000000000000000000000000000060100010000000212000000000100121031197107000000000120000000000100000000000000000000000000000000000000120000035100000001606000000000000000120000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAACATGTATGAAC-------------201146.00146000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302225145500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TCCTGATC----------AAGAATA----------------T-------------ACATACATG----.................................................................................................................................................251127.001270000000000000000000000000000000000000000011010000040020000000000000000000000000000000000000000000000000000000000000000000000000000001000000060307200510011500000000000000000000000000000000010000000000000002000000000000090120108360000000000100000000000000000000000000000000000000000000000002000000000000000001000000000000000400000000
......................................................................................................................................................TATACGG------------ACAGA--------CGTACATGGCCAGA..............................................................................................................................................................................................................................................265107.00535000000000000000000000000000000000000001011001010000000000100000000000000000000000010001000000010100000000000000000000000000000000090400200091000010242000840000000000000000000000000100000000030310000141252803010139000200158321088511481000000001100000000001000000000000000000000000000000000000003001001400000000333000000000000000100000000
..............................................................................................................................ATAGTTCCTGAGATGT-CGACGTGTA..........................................................................................................................................................................................................................................................................................251100.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059090181210000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGAC...............................................................................................................................................................................................................................................................................................24191.009100000000000000000000000000000000000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000000000001000000000011471013002104000000000000000000000000000000001100000000000000020000000000000403081270000000000000000000000000000000000000000000000000000000000003000000100000000611000000000000000111000000
....................................................................................................................................................TGTATACGG------------ACAGA--------CGTACATGGCCAGA..............................................................................................................................................................................................................................................28176.00760000000000000000000000000000000000000000000000000000100000000000000000000000000000003000000000000000000000000000000000000000000000300000000300000110010000000000000000000000000000000000000000000200000000000010001000000006070162170000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.............................................................................................................................................................................................................................TCCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------A....................................................................................27171.0071000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000006040117410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGA................................................................................................................................................................................................................................................................................................23163.006300000000000000000000002000000000000000001000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000002080004100013000000000000000000000000000000000000010051900000020000000000000201000100000000000000000000000000000000000000000000000000000000000001000000000000000412000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAAAAAACATGTATGAAC-------------22158.00580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133261500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAAAACATGTATGAAC-------------21140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104502100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................ATAGTTCCTGAGATGT-CGACGTG............................................................................................................................................................................................................................................................................................23132.00320000000000000000000002000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000001002000000000000000000000070002400000000000000000000000000000000000000000000000000000000000007100000000000000100000000000000000020000000
................................................................................................................................................................................................................................................................................................................................................................TACTTCATATGGT-----------CTGAAATGCCTT..............................................25131.00310100000000000000000000100000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100104000210002000000000000000000000000000000000000000100000000001000007000100020100010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................TGTATACGG------------ACAGA--------CGTACATGGCC.................................................................................................................................................................................................................................................25130.00300000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000301002000000100000010000000000000000000000000000000000000000000200002000002000000000000000002360000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000000000000
....................................................................................................................................................TGTATACGG------------ACAGA--------CGTACATGGC..................................................................................................................................................................................................................................................24128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000104000000000000000000000000000000000000000000000002000010100000000110103130000000000000000000000000000000000000000000000000000000000000000000000000000321000000000000000100000000
....................................................................................................................................................TGTATACGG------------ACAGA--------CGTACATGGCCA................................................................................................................................................................................................................................................26127.00270000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005380000000001000000000000000000000000000000000000000000000000002000000410000000110000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTAAAAAAACATGTATGAAC-------------25123.002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031022500000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATACTTCATATGGT-----------CTGAAATGCCTT..............................................27123.00230000000000000000000000000000000000000010030000001020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000200000000001010100000000010201000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.......................................................................................................................................................................................................................................................................................TACATG----T-----------------------------------------------------------ATATACTTCATATGGT-----------CTGA......................................................27120.00200000000100000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030203120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGACGTGT...........................................................................................................................................................................................................................................................................................28120.00200000000000000000000000000000000000000000000010000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000002000030000000000000000000000001230000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................TCCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------.....................................................................................26120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000000000000000000000000000000000002000000000000000000000000010222070000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
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.........................................................AAACTTGCGCCGTATCTATGT....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TACATG----T-----------------------------------------------------------ATATACTTCATATGGT-----------CTGAAA....................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GTGTATACGG------------ACAGA--------CGTAC.......................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................................GTATACGG------------ACAGA--------CGTACATGGCCAGA..............................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................TTCCTGAGATGT-CGACGTG............................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................T-CGACGTGTATACGG------------ACAGA--------CGTACA......................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................GTTCCTGAGATGT-CGACGT.............................................................................................................................................................................................................................................................................................1921.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................GTTCCTGAGATGT-CGACGTGTAC.........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------A....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................TTCTAGAATCTGTATGTTCAAA..............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GTATACGG------------ACAGA--------CGTACATGGCCT................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................TTGATCCTGATC----------AAGAATA----------------T-------------ACATACA.......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TGT-CGACGTGTATACGG------------ACAG.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................TCAACTATTGTATCTTAACCTTCAAGCA.......................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCATATGGT-----------CTGAAATGCCTTTTTCAC........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................ATCCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------A....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................A--------CGTACATGGCCAGAT---------CGACTCGGC...........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGACGTGTATACGG------------ACAGA--------CG..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AACTTGCGCCGTATCTATGTTTCTA...............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TATAGTGGGGCGTCACAACGTGT-CT.............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TAACCTTCAAGCTTTTATAGT...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CTTGCGCCGTATCTATGTTT..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................TACATGGCCAGAT---------CGACTCGGC...........................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AATGCCTTTTTCACTCTACGAGTAA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TATACTTCATATGGT-----------CTGAAA....................................................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TCTAGAATCTGTATGTTCAACTATTG.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTGGGCATTATAGTGGGGCGTCA........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GTACATGGCCAGAT---------CGACTCGGCT..........................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.C------------AGTATGTGGGCATTATAGA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------A....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................T-CTCAACAAACTTGCGCCGTATCTA.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCACTCTACGAGTAAAAAAACATGTAT.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CAAACTTGCGCCGTATCTATGAA...................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................TATTGTATCTTAACCTTCAAGCTTT.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AACAAACTTGCGCCGTATCTATGTT...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................GTGTATACGG------------ACAGA--------CGTACATGGCC.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTTTATAGTTCCTGAGATGT-CGACGTGC...........................................................................................................................................................................................................................................................................................2821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CACAACGTGT-CTCAACAAACT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CAGA--------CGTACATGGCCAGAT---------CGAC................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACGTGT-CTCAACAAACTTGCGCCGT............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................TATTGTATCTTAACCTTCAA..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TTCCTGAGATGT-CGACGTGTATACGG------------ATC......................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TCCTGAGATGT-CGACGTG............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCTACGAGTAAAAAAACATG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCATATGGT-----------CTGAAATGCCTTTTTCACTC......................................2911.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCACTCTACGAGTAAAAAAACATGTATG................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TATGTGGGCATTATAGTGGGGCGTCAC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATAGTGGGGCGTCACAACGTGT-CTCA...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAAAACATGTATGAAA-------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TGTATGTTCAACTATTGTATCTTAACCT..............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTCATATGGT-----------CTGAAATGCCTTTTTCAC........................................2811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TCAACTATTGTATCTTAACCTTCAAGC........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AATGCCTTTTTCACTCTACGAGTA..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATACTTCATATGGT-----------CTGAAATGCCTTT.............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACAACGTGT-CTCAACAAACTTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................TCACAACGTGT-CTCAACAAACTTG..................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCTGTATGTTCAACTATTGTA.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TAGTGGGGCGTCACAACGTGT-CTCAA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGCCTTTTTCACTCTACGAGTAAAAA..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................TGATCCTGATC----------AAGAATA----------------T-------------ACATACA.......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTGGGCATTATAGTGGGGCGT..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TACGG------------ACAGA--------CGTACATGGC..................................................................................................................................................................................................................................................2081.0080000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000110000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CGAGTAAAAAAACATGTATGA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATGGT-----------CTGAAATGCCTTTTTCACT.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CACTCTACGAGTAAAAAAACATGTAT.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TGAGATGT-CGACGTGTATACG......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATACTTCATATGGT-----------CTGAAATG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................G------------ACAGA--------CGTACATGGCCAGAT---------CG..................................................................................................................................................................................................................................2371.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TATTGTATCTTAACCTTCAAGC........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CCTGATC----------AAGAATA----------------T-------------ACATACATG----T-----------------------------------------------------------ATA..................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TATAGTTCCTGAGATGT-CGAC...............................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000
droEre2
GC------------GGCTTGTGGGCTTAGTACTGG-GCGTGGCAACATTTGGACAACAAACTTCCTCT------------CTGGAAGCAGCGTGCTGT-----TG-AGATTAACATTCTAGCTTTTGTAGTTCCTGAGATCG-AGGCGTTCATACGG------------ACAGT--------TTGACATGGCCAGAT---------CGACTCGGTTATTGATCCTGATC----------AAGAATA----------------T-------------A-------------------------------------------------------------------------TATACTTTGTATTAT-----------ATTAACAGGCTT----------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................AGATCG-AGGCGTTCATACGG------------ACA......................................................................................................................................................................................................................................................................23200.751500000015
..................................................................................................................................TTCCTGAGATCG-AGGCGTTCATACGG------------A........................................................................................................................................................................................................................................................................27200.0511000000
..................................................................................................................................TTCCTGAGATCG-AGGCGTTCATACG......................................................................................................................................................................................................................................................................................25200.0511000000
..........................................................................................................................TTTTGTAGTTCCTGAGATCG-AGGC...............................................................................................................................................................................................................................................................................................24200.0510000100
droYak3
GC------------GGTTTGTGGGCGTTAGAGTGG-GCGTGGCAACATGG-GTCAACAAACTTGCGCTGA------GTCTCTTGAGTCCGCATGCAGC--------ATCTCAACTTTTAATCTTTTATAGTTAC-------------GAACCAACGG------------A------------CGGACATCGATT---TCAACGAATCGATTT------------CAAAGA-------------------------------------------------------------------------------------------------------ACGGGTATAAC--ATG--AAATTCGATTCTTAATAA---------TGACCCGTTCATGAGTAT------------------------------------CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TTTCAGTTTTTCGTGAATTATGGGCGTTGTAATGG-TCATGGCAG---------GATAAACTTACGCTGCGTAAGGACCTC-AAAATCTGC----TTA--------ATCTCAACTTTGTATCTCTTATAGTTTCTGAGATCT-CAGCGGTCATTCTG------------ACAGACGGACGG------A-----------------------CGGCTATTGATACTGATA----------AAACATA----------------A-------------A-------------AGGGTCGGAAAC------------------------------AAAGGCTA--------TAAAAGTCTTGTACTGC-----------ATAA---AGCTTATGCATG---------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GC------------GGATTGTGGGCGTTAGAGTGG-GCGCGGCACCCCGC-TGAAATAAACTTGCGCTGCATAGGAAGCCCAGGAATCTGCATGCCTA--------GTTTGACTGTTTTAGCTCTTATAGTTTCCGAGATCT-CAGCGTTCATACGG------------ACGGA--------CGGACATGGCTAGAT---------CGACTCGTCTAGTGATGTTTG--------------------------C----GTTGCAAACCCT----CTGCAAGAT-------------------------------------------------------------------------------------------------------------------------------------------TATAAAAATGTASizeHit CountTotal NormTotal
No Reads
droTak1
GG------------CGATTGTGGGCGTTAGAGGGG-GCGTGGCGCTCGTA-TGAAATAAACTTGCGTTGCGTAGGAGGCCTAAGAATATGTGTGGGAA--------ATCTTAACCTTCTAGCTTTTGTAGTTTCCGAGATCTTTCGCGTTCATACGGACAGACAGACGAACAGA--------CGGACATGGCTATAT---------CGACTCGGCTAGTGACCCTGATC----------AAGAATA----------------T-------------ATATACT--TTAT-AGGGTCGGAAATGCTTCCTTCTAGCTGTTACATACTTTATATAACGGGTATAATATATG--AAACTGGTAT---AATAATTAATTTATTAACAGACTTATGAGATCTATGCATGGGTACACGCGAATGAATCCCAAGCAACGCASizeHit CountTotal NormTotal
No Reads
droEle1
GC------------GACTTGTGGGCGATAGAGTAC-GCGTTGCCAC-----GTTAATAAAATTGCGTTGCTTAAAAGTTACTAGAATCTGCATTTTAA--------ATCTCAATTTTCTTGCTTTTATAGTTTACAAGTTCT-TGACGTTTATACAG------------A------------CGGACATGGCGA---------------------------TCCTGAAAAAGTTTTATCGCTTGTAATGGGCACTGGA------------ATAACAAAACACCAA----A-----------------------------------------------------------AAAAACTTTTTTTGTA-----------AT--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GC------------G-----------TTAAAGGGG-GCGTGGCACCTTTT-TGAAACAAACTTGCGCTGCGTAGGAACTCCTAGAATCTGCATGCAAA--------ATGCCAATCTTCTAGCTTTAATAGTTTCCGAGATCT-CAGCGTTCATACGG------------ACT------------ACTAT---TTTTTCCACTTTGTCGAATT------------TTTAAAA------------A-------TAT-------------TATAAAT-------------------------------------------------------------------------TTAAAATTTTTATTTTTT-----------GT----TGGTTC-----------------------------------------ATGCGSizeHit CountTotal NormTotal
No Reads
droFic1
GC------------AGCTTGTTGGCGTAATAATGG-GCGTGGCAAAACAA-TTTAACAAACTTGCACTGCGTAAGAATAATAAGTATCTACAGTTTTA--------ATCCCAATATTCTAGTTCCTGCAGTTCCCGAGACCT-CGACTTTAATACGG------------ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AT------------TTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTT-----------TTAAACAGACTAATGCGTGCCATGTCTGAGCATACTCGTATGAACCCAGATCGCCGCASizeHit CountTotal NormTotal
No Reads
droAna3
AT------------AAGAAAATGATATTAAACTAA------TTACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTAAAGATTAATGCGCGCCATGTCGGAACATACTCGAATGAATCCCGACCGACGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
A------------------------------------------------------ACAAACTTGAACTGCGTGGGCATTATAGCAGTCTCCATGTCAA--------ATGCTACAGCTGTATCTCTTGTAGTCTCTGAGATCC-ACGCGATCATACGG------------ACAGACTGGCAGACGGACATGGCTATAT---------AGACTTGGCTGTTGATGCTGATC----------AAAAATA----------------A-------------ATATA--------T-----------------------------------------------------------ATACATTCAATGT------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TT------------ACTCTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGATTCATGAAAGCAATGAGCGAGTTTACCAGATTGAATCCGGACCGTCGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCAATGAGCGAGTTTACCAGAT..................2611.0010100000000
droPer2
TT------------ACTCTTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAGATTAATGAAAGCAATGAGCGAGTTTACCAGATTGAATCCGGACCGTCGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGATTGAATCCGGACCGTC...2020.501010000
droWil2
AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACTTATGCGTGCCATGTCGGACTATACGCGTATGAAACCTAATCGACGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTCGGACTATACGCGTATGAAACC...........2511.00101000
droVir3
AA------------TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATGAA-------A--TCGTTTCAGTTTCATGCGTGCATTAGCGAATCATACACGCATGAATCCAGGCAGACGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................TTTCATGCGTGCATTAGCGAATC...........................2311.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTCATGCGTGCATTAGCGAATCATAC.......................2611.001000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCATGAATCCAGGCAGACG..1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTCATGCGTGCATTAGCGAATCATACAC.....................2811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TT------------TATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACAGTCTCATGCGTGCTATGTCGAATCATACACGAATGAATCCCGAAAGACGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTTATGCGCGCGATGTCCAATCATACACGCATGAATCCAAGCAGACGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 09:02 PM