dsi_13855

five_prime_UTR [2l_5858092_5858161_-]; CDS [2l_5858046_5858091_-]; exon [2l_5858046_5858161_-]; exon [2l_5857483_5857839_-]; CDS [2l_5857483_5857839_-]; intron [2l_5857840_5858045_-]

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCACCTAACCATAAACCAGTTGTCTAACAGTGTTATTAGCTTGTTCCGTAAGGATCATGCCATTGCCATAAGCTCCCTATGCCTTAAAAACAAACAATTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAAGTGTCCAGTGTTCTGCGCCATTTATTGATCTACTCTGAATGTGTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG ************************************************....................((((....((((......(((((......((.((.(((....))).)).))))))).....))))...)))).........((((((..(((......(((((...(((........(((((.((((..(((....)))....)))).))))))))...))))).......)))..))).)))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	GSM343915 embryo	M025 embryo	M053 female body	O001 Testis	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries
............................TTGTTAACAAAGCCGCAGATTG................................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0
.........................................CGCAGATTGGTAAATAAACGCC...................................................................................................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0
..AAATGGCTGCAATTGTGCGA............................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0	0	0
.............ATTGTGCGATTTAATTTGTT.................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	0	1	0	0	0
GAAAATGGCTGCAATTGTGC..............................................................................................................................................................................................................................................................................................	20	0	1	1.00	1	0	0	1	0	0	0	0
.............................TGTTAACAAAGCCGCAGATTGTTGA............................................................................................................................................................................................................................................................	25	2	1	1.00	1	0	0	0	0	0	1	0
.........................................CGCAGATTGGTAAATAAACGC....................................................................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................AGGATCATGCCATTGCCATAA..............................................................................................................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................................................ATTGTAGTGGCGGCTTTGCCGG...................................	22	3	2	0.50	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................TGTTTTGCAGTTGCGGCT..........................................	18	1	3	0.33	1	0	0	0	0	0	0	1
.........................................................................................................TGCGGAAGGATCATGCCA.......................................................................................................................................................................................	18	2	4	0.25	1	0	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................CTTCCAGAGCCCCCA.	15	1	13	0.08	1	0	0	0	0	0	0	1
..................................................................................................................................................................................................................CAGTGTTCTGCGCGA.................................................................................	15	1	15	0.07	1	0	0	0	0	0	0	1

CTTTTACCGACGTTAACACGCTAAATTAAACAATTGTTTCGGCGTCTAACCATTTATTTGCGGTGGATTGGTATTTGGTCAACAGATTGTCACAATAATCGAACAAGGCATTCCTAGTACGGTAACGGTATTCGAGGGATACGGAATTTTTGTTTGTTAAAGGTACGGTAGTTTAATACATTAAAAACGCGTTTCGTTTTGTTTTCACAGGTCACAAGACGCGGTAAATAACTAGATGAGACTTACACAGAACGTCAACGCCGAAACGGCCGGTCGGACGTACACGTCGCGAAGGTCTCGTGGGTC ************************************************....................((((....((((......(((((......((.((.(((....))).)).))))))).....))))...)))).........((((((..(((......(((((...(((........(((((.((((..(((....)))....)))).))))))))...))))).......)))..))).)))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	M024 male body	M023 head	O001 Testis	M053 female body	SRR553487 NRT_0-2 hours eggs	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries
...............................................................................................................................................................................................................................................................................................CGCGAAGGTCTCGTGGGTC	19	0	1	1.00	1	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................CACAGGTCACAAGACGCGGTAAATAAC..........................................................................	27	0	1	1.00	1	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................AAGGTACGGTAGTTTAATACA..............................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0
......................................................................................................................ACGGTAACGGTATTCGAGGGA.......................................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0	0	0	0	0
....TACCGACGTTAACACGCTAAA.........................................................................................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	0	1	0	0	0	0	0
....................CTAAATTAAGCATTTGTT............................................................................................................................................................................................................................................................................	18	2	20	0.70	14	0	0	0	0	14	0	0	0	0
..............................................................................................................................................................................................................................................................................................TCGCCAGTGTCTCGTGGGTC	20	3	3	0.33	1	0	0	0	0	0	1	0	0	0
........................................................................................................TAGGCATTTCTAGTACGG........................................................................................................................................................................................	18	2	5	0.20	1	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................TGTTATAGGTAGGGTAGT......................................................................................................................................	18	2	5	0.20	1	0	1	0	0	0	0	0	0	0
......................................................TATTTGCGGCCGATTGATAT........................................................................................................................................................................................................................................	20	3	6	0.17	1	1	0	0	0	0	0	0	0	0
........................................................................................................................GGTATCGGTTTTCGAGGG........................................................................................................................................................................	18	2	7	0.14	1	0	0	0	0	0	1	0	0	0
...............................AATTGGTTCGGGGTCTAAA................................................................................................................................................................................................................................................................	19	3	20	0.10	2	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................AGACGCGGTAAATAAGT.........................................................................	17	1	11	0.09	1	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................CGGTAGTTTAAGAAATTA...........................................................................................................................	18	2	20	0.05	1	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................AAGGTTCGGTAGTTT....................................................................................................................................	15	1	20	0.05	1	0	0	0	0	0	0	0	1	0
............................................................................................CAATCTTCGAACAAGG......................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	0	0	0	0	1

Species	Coordinate	ID	Alignment
droSim2	2l:5857790-5858095 -	dsi_13855	GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTGTCTAACAGTGTTATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTCCCTATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCCATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG
droSec2	scaffold_5:4133181-4133484 -		GAAAATGGCTGCAATTGTGCGATTTAAT-TGTT-ACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTGTCTATCAGTGTCATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTTCCTATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCAATT-------TATTGATCCA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG
dm3	chr2L:6062386-6062691 -		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTTTCTAACAGTGTCATTAG--------CTTG----------T---TTCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTCCCCATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCAATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGACTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG
droEre2	scaffold_4929:11058372-11058677 +		GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------TCTAACCATAA-------AGCAGTTGCTAAACAGTGGCATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CTGCT-CATTGCCATAAGCTCTCCATGCC-TTAAATA--CAACCGA-TTCCCATACCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT--TCCTGT--GT------------TCTGCGCAATT-------TATTGATTTA----CTCT--GAATG--T-GTATTGCAGTTGCGGCTTTGCCGGCTAGCCTGCATGTGCAGCGGTTCCAAAGCACCCAG
droYak3	2L:13129557-13129862 +		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------TCTAACCATAA-------TCCAGTTGCTTAACGGTGCCAATAG--------CTTG----------T---TCCGTAAGGAT----------------------CTTGC-CATTGCCATAAGCTCTTCATGCC-TTAAATA--CAACCGT-TTCCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT--TCCTGT--GT------------TCTGCGCAATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGGTTCCAGAGCACCCAG
droEug1	scf7180000409676:506420-506728 +		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCAGCATATTGGTAAATAAACGTTGATAATTT-CCA---CAAAAACATTG-------ATTACTTATTTAATAGCGGCATTAT--------CTTA----------T---TCCAC-----------------------------GTGC-AACTGCCAAAGTTACCCCAAGCG-TTGAATA--CAATCTA-TATA-TTTCTAAGAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT-TCCCAGA--GT------------TCTGCGCATTT-------TAATGATTTT----TCCT--ATATG--T-ATCTCGCAGGTGCGGTTTTGCCGGCCAGCCTGCAGCTGCAGCGGTTCCAGAGCACGCAG
droBia1	scf7180000299447:29448-29727 +		GAAAATGGCTGGTATTGTTCGATTTAATTTGTTTGCAAAGACAAATTTTGGTAAATATG-GCGGAATACGT-TCA---GATTACTTTGA-------CATCGTTTCCTTGTAGTGGCAATAG--------CTTG----------T---ACAGCATGAAA----------------------CCTTT-GATTGCCATAAGTGTCAAAAGC-------AA--AAAACGA-TTCCATCGCGACCAAATTATGTAATTTTGGGCTAA--------------------------------------------CACATTT-------TATTGATGTG----CTCT----TTG--T-CCATTGCAGGTGGGTCTTTGCTGGCCAGTCTGCAGCTGCCCCGGTTCCACAGCAGCCAG
droTak1	scf7180000415693:30392-30706 -		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCATATTGGTAAATAAAGCCGACA--TTT-CCA---CATATACGTTA-------ATTAGGTGCCTTTCAGTTGCATCAG--------CTTG----------T---TCCGCGTGGAA----------------------CTTGC-AACTGCCATAGGTGCCACAAGGC-TTGAAAA--CAATCGA-TTCCCTTGCTACCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT-GTTCAAT--GC------------TCTGCGCATTT-------CAATTATTCG----TCCC--ATTTG--T-ACATTGCAGGCGCGGTTCTGCCGGCCACCCTGCAGCTGCAGCGGTTCCAAGGCACCCAG
droEle1	scf7180000490399:148669-148975 -		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGTCGCAAATTGGTAAATAAACGCCGAATATTT-TCC---CACATCCACTG-------CCAAGTTGCTAAG---------TAG--------CATG----------T---TCTGCATGAAC----------------------CTTGC-TATTGCCACAAGTGCTCCCAGCC-CTGAAAA--CAATCTATTTCTCTTGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GT----CCAGT--GC------------AATGCGCAATT-------TATTGATTTT---GCCCC--ATGTG--T-GCCTTGCAGGTGCGGCTTTGCCGGTCAGCCTGCAGCTGCAGCGGTTCCAGAGCACCCAA
droRho1	scf7180000772905:15611-15919 -		GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCATATTGGTAAATAAACACCGAAGATTT-TCC---CAAAACCATTA-------ATAAGTTGCTTAACA---------G--------CTTG----------T---TTCGCATGGAT----------------------ATGGC-TGTTGCCACAAGTTATCCAAGCC-TTGAAAA--CAATCGA-TTCCCTTGCCATCAAATTATGTAATTTTGGCGCATAACTAAACAAAA-GTG-TTCCAGT--TT------------TCTGCGCAATT-------TATTGATTTT---GTCCC--ATGTA--T-GCATTGCAGGGGCGGCTTTGCCAGTCAGCCTGCAGCTGCTGCGGTTCCAAAGCACCCAA
droFic1	scf7180000453932:564760-565076 -		GAAAATGGCTGCGATTGTGCGATTTAATTTGTTAACAAAGCCGCATATAGGTAAATAAACGCTGAAAATTC-ACT---AGTGACCTTCA-------GTTAGTTGCTTAATAGTAACTCAAG--------CTTG----------T---TATCAATGAAT----------------------CTGTC-AACTGCCTTAGTGGCTTCGAGCC-CTCAAAA--CAATCGA-TTTCCTTGCCATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAT-GCT-GCCCAGT--GC------------TCTGCGCAATT-------TATTGATTTG----CCTT--GCTGG--T-TTGTTGCAGGGGCGGCACTCCCGGCTAGCCTGCAGCTGCAGAGGTTCCAGAGCAACCAG
droKik1	scf7180000302679:669529-669842 +		GAAAATGTCTGCACTTGTGCGATTTAATTTGTTAACTAAACCGCAATTGGGTAATTAAATCAAT--------------AACAATCACTA-------TTTAGAAGTTTAGCAGTGACATTAG--------CTTGC-------ACT------TTCGGGTT---GTGGCTATTCATAGGATAACT-------------------TGCAACTC-GGTGAAA--CAGTCGG-TTTAAGTGCAACCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAG-ATA-TAGCAGAGGGT------------TGTGCGCATTT-------TATTGATTTGCCTGTCTT--ATTTG--T-GCCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCAGCTTCAGCGGCTTCAGAGCAACCAG
droAna3	scaffold_12916:8138612-8138912 +		GAAAATGGCAGCAATTGTGCGATTTAATTTGTTAGCTTCGCCGCAAATTGGTAAATAATAGAGTAATATAT-ACC---TCTCT---CAA-------TTTAGAGGCTTCCCCTCTTTACTGG--------ATTGTCAA------T----T--T-----------------------------GGGC-CTGTGGCAAAGCCTACTAATGCC----AAAA--TCTTTAA-GTTCCTTGCTATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAC-GTT-CGTTGGT--GC------------GCTGCTTATTT-------TATTGATTTC----TC------GTG--T-GTTTTGCAGTTGCGGCATTGCCGGCGAGGCTAAACCTGCAGCGTCTACAGAGCACTCAG
droBip1	scf7180000396554:749133-749434 +		GAAAATGGCAGCAATTGTGCGATTTAATTTGTTAGCTTCGCCGCAAATTGGTAAATAATAGAGTTATACACAACCCC-CCTCGATATAA------------AGGGTTTTCCCCTTTACTAA--------GTCGCCCA------T----T---------------------------------TGG-GGCTGTGGCAAGTCCTCCTTATC-GTCAAAT--CT-CTAT-ATTCCTTGCTATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAC-GTT-TGTTGGT--TC------------ACTGCGTATTT-------TATTGATTTC----TC------GTG--T-GTTTTGCAGTTGCGGCTTTGCCGGCGAGGCTAAACCTGCAGCGTCTACAGAGCACTCAG
dp5	4_group1:201934-202253 +		GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACCAAGCCGCAATTAGGTAAATAGAGGCGAAGAATTC-GTT--TAAAAAGTGCTA-------ATTAGTGATTTAACTGTGGCATTCG--------CTGT------CCGCTTACT---------TGTGAGACTTGTTAATCA--------------------AGTCGCTGCAAGCC-AGCAAAA--CAATCAT-TTCCCTTGCAACCAACTTATGTAATTTTTGCGCAAAGCAAAACAAAA-CGCAAAGCAAA-GGT------------TCTGCGCAATT-------TATTGATTTG----ATC---ATGTG--C-TTCTTGCAGTTGCGACTCTGCCTGGCAGCCTGCAGCTGCAGCGGCTGCAGAGCACACAG
droPer2	scaffold_1:198122-198441 +		GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACCAAGCCGCAATTAGGTAAATAGAGGCGAAGAATTC-GTT--TAAAAAGTGCTA-------ATTAGTGATTTAACTGTAGCATTCG--------CTGT------CCGCTTACT---------TGTGAGACTTGTTAAGCA--------------------AGTCGCTGCAAGCC-AGTAAAA--CAATCAT-TTCCCTTGCAACCAACTTATGTAATTTTTGCGCAAAGCAAAACAAAACGCA-AAGCAAA-GTT------------TCTGCGCAATT-------AATTGATTTG----ATC---ATGTG--C-TTCTTGCAGTTGCGACTCTGCCTGGCAGCCTGCAGCTGCAGCGGCTGCAGAGCACACAG
droWil2	scf2_1100000004521:7856263-7856563 +		GATAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAACCGCAAATTGGTAAATAAAGGCCATAAACCT-AGT---TAAACCTG-----------ATAGCTTTTTA---GTTAA-------------AACGCGCTCTAGGCTTGATAATTAAATAT----------------------AAGTCAAGTGGCACTAAGCTTGTTAAGTGGCTAAAAT--CAATAAG-TTTT----------TATTACATAATTTTTGCTCATAGCAAAACAAAC-TCT-GTGCAGA--GA------------TGTA----AAA-------AAATAACTTT----TC-------AA--T-ACGTTTCAGTTGCGGCTTTGCCTGCCAGTCTGCAGTTGCAGCGGCTACAGAGCACTCAA
droVir3	scaffold_12963:3975386-3975695 -	dvi_10427	AAAAATGGCTGCAATAGTGCGATTTAATTTGTTAACAAAACCGCAATTTGGTAAATAAACAGTAGCGTTT----------TAGTTGTAGACTATTTTTTAAATGCCTTACAATATCATTGG--------ACAA----------T----TCGTGACGTT----------------------GGCAG-CAATGCTATA------TAAAGCT-AT---GT--TATAAAT-TTCAGTTGAAAACAAATTATGTAATTTCTGCGCACATAAAAACAAAA-GCTGTGGCGCA-CAT------------ATTGCATATTC------ATATTGATTTA----TTAT--AATTGCAA-TTTTTACAGTTGCGGCTCTGCCGGCCTCTCTGCAGTT---GCGCTTGCAGAGCACGCAA
droMoj3	scaffold_6500:7823327-7823638 -		GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACAAAACCACAATTTGGTAAATACACAACG--------------TTGTAGACTTA-------AACTGTGGTGTAAATGTTTAATTGG--------GTAA----------C----CCGTTAAGTTGGCAGG----------------CATGC-TAGTTAAATCGGAGCCAGCTGGC-AT---ATTACAA--AATTTGTGTTCCAAACAAATTATGTAATTTCTGCGCACAACAAAACAAAA-AAA----------AAATTGCGCATTGATGAACT---AC-------TATTGATTTA----TATA--AATTGCATTATTTTGCAGTGGCTGCGTTGCCGGGCGCAGTACAGTT---GCGCTTGCAGAGCACTCAA
droGri2	scaffold_15252:1430395-1430701 +		GAAAATGTCTGCAATTGTGCGATATAATTTGTTAACGAAACCGCAATTTGGTAAATAAACGCAAGTTCT------------------TA----ACTCGTGCATGCCTAACTTTATCATTGCCCAGCCAAGCTGCACA----------------------GTAGGCGTGGCATTTAGCGCGCAGCC-AGCTGGCATA------------------TAC--TAAACAT-TACACTTGCAAACAAATTATGTAATTTTTGCGCACATCAAAACAAAA-GTG-------------------------CTGCAAAATATAATTTATATTGATTTT---GTACAAAATTGG--A-TTATTGCAGTTGCGGCGCTGCCGTCGACTCTGCAGCT---GCGCCTACAGAGCACTCAG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTGTCTAACAGTGTTATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTCCCTATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCCATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
............................TTGTTAACAAAGCCGCAGATTG......................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CGCAGATTGGTAAATAAACGCC.........................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AAATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.............ATTGTGCGATTTAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
GAAAATGGCTGCAATTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CGCAGATTGGTAAATAAACGC..........................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................AGGAT----------------------CATGC-CATTGCCATAA...................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GAAAATGGCTGCAATTGTGCGATTTAAT-TGTT-ACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTGTCTATCAGTGTCATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTTCCTATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCAATT-------TATTGATCCA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................................................................................................................................................................................................................................................................................................................................................................CTGCATGTGCAGCGCTTCCAGA........	22	1	2.00	2	0	0	2	0
............................................................................................................................................................................................................................................................................................................................................................................................GCATGTGCAGCGCTTCCAGA........	20	1	2.00	2	0	2	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGCTTCCAGAGCACT...	22	1	1.00	1	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................................CATGTGCAGCGCTTCCAG.........	18	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTCCAGAGCACCCA.	19	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................CATGTGCAGCGCTTCCAGA........	19	1	1.00	1	1	0	0	0
....ATGGCTGCAATTGTGCGATTTAAT-...........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGCTTCCAGAGCA.....	20	1	1.00	1	0	0	0	1
.AAAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0

dm3

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------CCTAACCATAA-------ACCAGTTTTCTAACAGTGTCATTAG--------CTTG----------T---TTCGTAAGGAT----------------------CATGC-CATTGCCATAAGCTCCCCATGCC-TTAAAAA--CAAACAA-TTTCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTG--TCCAGT--GT------------TCTGCGCAATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGACTTTGCCGGCCAGCCTGCATGTGCAGCGCTTCCAGAGCACCCAG	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................TGCATGTGCAGCGCTTCCA..........	19	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................TGCATGTGCAGCGCTTCC...........	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTTTGCCGGCCAGCCT............................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....ATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.....................................................................................................................................................................................................................................................................................................................................ATCTA----CTCT--GAATG--T-GTCTTG.....................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTTTGCCGGCCAGCC.............................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CGCAGATTGGTAAATAAACG...........................................................................................................................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................CGCAGATTGGTAAATAAACGC..........................................................................................................................................................................................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
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.AAAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................ATTGATCTA----CTCT--GAATG--.............................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................TTTGCCGGCCAGCCTGCATG.......................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......GGCTGCAATTGTGCGATTT...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..AAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................A----CTCT--GAATG--T-GTCTTGCA...................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................AAA-GTG--TCCAGT--GT------------TCTGC.....................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------TCTAACCATAA-------AGCAGTTGCTAAACAGTGGCATTAG--------CTTG----------T---TCCGTAAGGAT----------------------CTGCT-CATTGCCATAAGCTCTCCATGCC-TTAAATA--CAACCGA-TTCCCATACCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT--TCCTGT--GT------------TCTGCGCAATT-------TATTGATTTA----CTCT--GAATG--T-GTATTGCAGTTGCGGCTTTGCCGGCTAGCCTGCATGTGCAGCGGTTCCAAAGCACCCAG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................................................................................................................................................................................................................................GCGGCTTTGCCGGCTAGCCT............................	20	1	2.00	2	2	0	0	0	0	0	0
..........................ATTTGTTAACAAAGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0	0
.........TGCAATTGTGCGATATAATT...........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
..AAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................CGGCTAGCCTGCATGTGCAGCGGTTCCA..........	28	1	1.00	1	1	0	0	0	0	0	0
..........GCAATTGTGCGATATAATTTG.........................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...AATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
................GTGCGATATAATTTGTTAACAAAGCC..............................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0
....................GATATAATTTGTTAACAAAGC...............................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
.....TGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GCATGTGCAGCGGTTCCAA.........	19	1	1.00	1	1	0	0	0	0	0	0
...................CGATATAATTTGTTAACAAAGCC..............................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
..............................GTTAACAAAGCCGCAGATTG......................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..AAATGGCTGCAATTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGGCTTTGCCGGCTAGCCTGCA.........................	24	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAAAGCA.....	20	1	1.00	1	1	0	0	0	0	0	0
..AAATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
.....................................................................................................................................................................................TGCT-CATTGCCATAAGCTCTCCATGCC-T.....................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGATATAATT...........................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................TGCATGTGCAGCGGTTCCA..........	19	1	1.00	1	1	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGATAT...............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGCGGTTCCAAAGCACC...	21	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCGGCTAGCCTGCATGTGCA...................	22	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TTGCCGGCTAGCCTGCATGTGCA...................	23	1	1.00	1	1	0	0	0	0	0	0
............AATTGTGCGATATAATTTGT........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
GAAAATGGCTGCAATTGTGCGATATAA.............................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGCGGTTCCAAAGCACCC..	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGCGGTTCCAAAGCACCCA.	23	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCGGCTAGCCTGCATGTGCAGC.................	24	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAAAGCACCC..	23	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTTCCAAAGCACCCA.	21	1	1.00	1	1	0	0	0	0	0	0
....ATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGGCTTTGCCGGCTAGCCTGCAT........................	25	1	1.00	1	1	0	0	0	0	0	0

droYak3

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCAGATTGGTAAATAAACGCCA--------------TCTAACCATAA-------TCCAGTTGCTTAACGGTGCCAATAG--------CTTG----------T---TCCGTAAGGAT----------------------CTTGC-CATTGCCATAAGCTCTTCATGCC-TTAAATA--CAACCGT-TTCCCATGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT--TCCTGT--GT------------TCTGCGCAATT-------TATTGATCTA----CTCT--GAATG--T-GTCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCATGTGCAGCGGTTCCAGAGCACCCAG	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................TTAATTTGTTAACAAAGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
............AATTGTGCGATTTAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAGAGCACC...	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................CTGCATGTGCAGCGGTTCCAGAGCA.....	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......GCTGCAATTGTGCGATTTAAT............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................ATGTGCAGCGGTTCCAGAGCACCC..	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGTTCCAGAGCACCCA.	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAGAGCACCC..	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCGGCCAGCCTGCATGTGCAGCG................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAGAGCA.....	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................GATTTAATTTGTTAACAAAGCCGC............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGCGGTTCCAGAGCACCC..	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................AGCCTGCATGTGCAGCGGTTCCAGAGCACC...	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
GAAAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................TTTAATTTGTTAACAAAGCCGCAGATTGT.....................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............ATTGTGCGATTTAATTTGT........................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TTGCCGGCCAGCCTGCATGTGCAGC.................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................ATTTGTTAACAAAGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................GCGATTTAATTTGTTAACAAAGC...............................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GCATGTGCAGCGGTTCCAGAGCACCCA.	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCGGTTCCAGAGCAC....	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................TTTAATTTGTTAACAAAGC...............................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................TTAACAAAGCCGCAGATTGT.....................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droEug1

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCAGCATATTGGTAAATAAACGTTGATAATTT-CCA---CAAAAACATTG-------ATTACTTATTTAATAGCGGCATTAT--------CTTA----------T---TCCAC-----------------------------GTGC-AACTGCCAAAGTTACCCCAAGCG-TTGAATA--CAATCTA-TATA-TTTCTAAGAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT-TCCCAGA--GT------------TCTGCGCATTT-------TAATGATTTT----TCCT--ATATG--T-ATCTCGCAGGTGCGGTTTTGCCGGCCAGCCTGCAGCTGCAGCGGTTCCAGAGCACGCAG	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAAAATGGCTGGTATTGTTCGATTTAATTTGTTTGCAAAGACAAATTTTGGTAAATATG-GCGGAATACGT-TCA---GATTACTTTGA-------CATCGTTTCCTTGTAGTGGCAATAG--------CTTG----------T---ACAGCATGAAA----------------------CCTTT-GATTGCCATAAGTGTCAAAAGC-------AA--AAAACGA-TTCCATCGCGACCAAATTATGTAATTTTGGGCTAA--------------------------------------------CACATTT-------TATTGATGTG----CTCT----TTG--T-CCATTGCAGGTGGGTCTTTGCTGGCCAGTCTGCAGCTGCCCCGGTTCCACAGCAGCCAG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCATATTGGTAAATAAAGCCGACA--TTT-CCA---CATATACGTTA-------ATTAGGTGCCTTTCAGTTGCATCAG--------CTTG----------T---TCCGCGTGGAA----------------------CTTGC-AACTGCCATAGGTGCCACAAGGC-TTGAAAA--CAATCGA-TTCCCTTGCTACCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GTT-GTTCAAT--GC------------TCTGCGCATTT-------CAATTATTCG----TCCC--ATTTG--T-ACATTGCAGGCGCGGTTCTGCCGGCCACCCTGCAGCTGCAGCGGTTCCAAGGCACCCAG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGTCGCAAATTGGTAAATAAACGCCGAATATTT-TCC---CACATCCACTG-------CCAAGTTGCTAAG---------TAG--------CATG----------T---TCTGCATGAAC----------------------CTTGC-TATTGCCACAAGTGCTCCCAGCC-CTGAAAA--CAATCTATTTCTCTTGCCATCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAA-GT----CCAGT--GC------------AATGCGCAATT-------TATTGATTTT---GCCCC--ATGTG--T-GCCTTGCAGGTGCGGCTTTGCCGGTCAGCCTGCAGCTGCAGCGGTTCCAGAGCACCCAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GAAAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAGCCGCATATTGGTAAATAAACACCGAAGATTT-TCC---CAAAACCATTA-------ATAAGTTGCTTAACA---------G--------CTTG----------T---TTCGCATGGAT----------------------ATGGC-TGTTGCCACAAGTTATCCAAGCC-TTGAAAA--CAATCGA-TTCCCTTGCCATCAAATTATGTAATTTTGGCGCATAACTAAACAAAA-GTG-TTCCAGT--TT------------TCTGCGCAATT-------TATTGATTTT---GTCCC--ATGTA--T-GCATTGCAGGGGCGGCTTTGCCAGTCAGCCTGCAGCTGCTGCGGTTCCAAAGCACCCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GAAAATGGCTGCGATTGTGCGATTTAATTTGTTAACAAAGCCGCATATAGGTAAATAAACGCTGAAAATTC-ACT---AGTGACCTTCA-------GTTAGTTGCTTAATAGTAACTCAAG--------CTTG----------T---TATCAATGAAT----------------------CTGTC-AACTGCCTTAGTGGCTTCGAGCC-CTCAAAA--CAATCGA-TTTCCTTGCCATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAT-GCT-GCCCAGT--GC------------TCTGCGCAATT-------TATTGATTTG----CCTT--GCTGG--T-TTGTTGCAGGGGCGGCACTCCCGGCTAGCCTGCAGCTGCAGAGGTTCCAGAGCAACCAG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GAAAATGTCTGCACTTGTGCGATTTAATTTGTTAACTAAACCGCAATTGGGTAATTAAATCAAT--------------AACAATCACTA-------TTTAGAAGTTTAGCAGTGACATTAG--------CTTGC-------ACT------TTCGGGTT---GTGGCTATTCATAGGATAACT-------------------TGCAACTC-GGTGAAA--CAGTCGG-TTTAAGTGCAACCAAATTATGTAATTTTTGCGCAAAGCAAAACAAAG-ATA-TAGCAGAGGGT------------TGTGCGCATTT-------TATTGATTTGCCTGTCTT--ATTTG--T-GCCTTGCAGTTGCGGCTTTGCCGGCCAGCCTGCAGCTTCAGCGGCTTCAGAGCAACCAG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

GAAAATGGCAGCAATTGTGCGATTTAATTTGTTAGCTTCGCCGCAAATTGGTAAATAATAGAGTAATATAT-ACC---TCTCT---CAA-------TTTAGAGGCTTCCCCTCTTTACTGG--------ATTGTCAA------T----T--T-----------------------------GGGC-CTGTGGCAAAGCCTACTAATGCC----AAAA--TCTTTAA-GTTCCTTGCTATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAC-GTT-CGTTGGT--GC------------GCTGCTTATTT-------TATTGATTTC----TC------GTG--T-GTTTTGCAGTTGCGGCATTGCCGGCGAGGCTAAACCTGCAGCGTCTACAGAGCACTCAG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................TTTGTTAGCTTCGCCGCAA..........................................................................................................................................................................................................................................................................................................................................................................	19	1	4.00	4	1	0	0	0	0	3
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGGCATTGCCGGCGAGGCTA...........................	24	1	3.00	3	0	1	0	0	0	2
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGGCATTGCCGGCGAGGC.............................	22	1	3.00	3	0	3	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................GCTAAACCTGCAGCGTCTACA..........	21	1	3.00	3	0	0	0	0	3	0
...........................................................................................................................................................................................................................................................................................................................................................................................TAAACCTGCAGCGTCTACAGA........	21	1	2.00	2	0	0	1	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGGCATTGCCGGCGAGGCT............................	23	1	2.00	2	2	0	0	0	0	0
.....................ATTTAATTTGTTAGCTTCGCC..............................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................CATTGCCGGCGAGGCTAAACCTGCAGC.................	27	1	1.00	1	0	1	0	0	0	0
GAAAATGGCAGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................AAACCTGCAGCGTCTACAGAGCA.....	23	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGCGTCTACAGAGCAC....	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................ACCTGCAGCGTCTACAGAGCAC....	22	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................AAACCTGCAGCGTCTACAGAGCACTCAG	28	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................GGCTAAACCTGCAGCGTCTACA..........	22	1	1.00	1	0	0	0	0	1	0
....ATGGCAGCAATTGTGCGATTTAA.............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................AAACCTGCAGCGTCTACAGA........	20	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGCGTCTACAGAGCACTCA.	24	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................ATTGCCGGCGAGGCTAAACCTGCAGCGTC..............	29	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................AACCTGCAGCGTCTACAG.........	18	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCGGCGAGGCTAAACCTGCAGCG................	25	1	1.00	1	1	0	0	0	0	0
..........................ATTTGTTAGCTTCGCCGCAAA.........................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................TAAACCTGCAGCGTCTACAGAGCACT...	26	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................CAGCGTCTACAGAGCACTCA.	20	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................AGGCTAAACCTGCAGCGTCTACA..........	23	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCGGCATTGCCGGCGAGGCTAAAC........................	26	1	1.00	1	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGTCTACAGAGCACTCA.	21	1	1.00	1	0	0	0	0	0	1
........................TAATTTGTTAGCTTCGCCGCAAATT.......................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGTCTACAGAGCACT...	20	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGTCTACAGAGCAC....	19	1	1.00	1	1	0	0	0	0	0
.........................AATTTGTTAGCTTCGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................AAACCTGCAGCGTCTACAGAG.......	21	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GCGTCTACAGAGCACTCAG	19	1	1.00	1	0	0	0	0	1	0
......GGCAGCAATTGTGCGATTTA..............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TTGCCGGCGAGGCTAAACCTGC....................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................ATTGCCGGCGAGGCTAAACCTGCAGC.................	26	1	1.00	1	0	1	0	0	0	0
....ATGGCAGCAATTGTGCGATT................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGCGTCTACAGAG.......	18	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGGCATTGCCGGCGAG...............................	20	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................TAAACCTGCAGCGTCTAC...........	18	1	1.00	1	0	1	0	0	0	0
...AATGGCAGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................CCTGCAGCGTCTACAGAGCA.....	20	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGTCTACAGAGCACTCA.	22	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................CGGCGAGGCTAAACCTGCAGCGTCT.............	25	1	1.00	1	1	0	0	0	0	0
...........CAATTGTGCGATTTAATTTGTTAGCTT..................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
...........................TTTGTTAGCTTCGCCGCAAAT........................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................CTAAACCTGCAGCGTCTACAG.........	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TTGCGGCATTGCCGGCGAGGC.............................	21	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGGCATTGCCGGCGAGGCTAAACC.......................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCGGCGAGGCTAAACCTGCAGCGTC..............	27	1	1.00	1	1	0	0	0	0	0
...............TGTGCGATTTAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1
GAAAATGGCAGCAATTGTGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................ATTGCCGGCGAGGCTAAACCTGCAGCGT...............	28	1	1.00	1	0	0	0	0	1	0
..........................ATTTGTTAGCTTCGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...AATGGCAGCAATTGTGCGATT................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
..AAATGGCAGCAATTGTGCGATT................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.....TGGCAGCAATTGTGCGATTTAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGGCATTGCCGGCGAGGCT............................	21	1	1.00	1	1	0	0	0	0	0
.........................AATTTGTTAGCTTCGCCGCAAATT.......................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0

droBip1

GAAAATGGCAGCAATTGTGCGATTTAATTTGTTAGCTTCGCCGCAAATTGGTAAATAATAGAGTTATACACAACCCC-CCTCGATATAA------------AGGGTTTTCCCCTTTACTAA--------GTCGCCCA------T----T---------------------------------TGG-GGCTGTGGCAAGTCCTCCTTATC-GTCAAAT--CT-CTAT-ATTCCTTGCTATCAAATTATGTAATTTTTGCGTAAAGCAAAACAAAC-GTT-TGTTGGT--TC------------ACTGCGTATTT-------TATTGATTTC----TC------GTG--T-GTTTTGCAGTTGCGGCTTTGCCGGCGAGGCTAAACCTGCAGCGTCTACAGAGCACTCAG	Size	Hit Count	Total Norm	Total
No Reads

dp5

GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACCAAGCCGCAATTAGGTAAATAGAGGCGAAGAATTC-GTT--TAAAAAGTGCTA-------ATTAGTGATTTAACTGTGGCATTCG--------CTGT------CCGCTTACT---------TGTGAGACTTGTTAATCA--------------------AGTCGCTGCAAGCC-AGCAAAA--CAATCAT-TTCCCTTGCAACCAACTTATGTAATTTTTGCGCAAAGCAAAACAAAA-CGCAAAGCAAA-GGT------------TCTGCGCAATT-------TATTGATTTG----ATC---ATGTG--C-TTCTTGCAGTTGCGACTCTGCCTGGCAGCCTGCAGCTGCAGCGGCTGCAGAGCACACAG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTCTGCCTGGCAGCC.............................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCTGCA.........................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	1	1	0	0	0
.............ATTGTGCGATATAATTTGTTA......................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGC.................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTCTGCCTGGCAGCCTGC..........................	23	1	2.00	2	1	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GACTCTGCCTGGCAGCCTGCAGCTGCA...................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................ATTAGGTAAATAGAGGCGAAG......................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................ATTCG--------CTGT------CCGCTTACT---------TGTGAGA....................................................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GCTGCAGCGGCTGCAGAGCACACA.	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TGCCTGGCAGCCTGCAGCTGCA...................	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCGGCTGCAGAGCACACA.	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGGCTGCAGAGCAC....	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGGCTGCAATTGTGCGATATA..............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................GATATAATTTGTTAACCAAGC...............................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.AAAATGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGATATA..............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTCTGCCTGGCAGCCTGCA.........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGCAGCCTGCA.........................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................TAATTTGTTAACCAAGCCGC............................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CGACTCTGCCTGGCAGCCTGC..........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGATAT...............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.............ATTGTGCGATATAATTTGTTAACC...................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....ATGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................ACTCTGCCTGGCAGCCTGC..........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGGCTGCAGAGCACACAG	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GACTCTGCCTGGCAGCCTGC..........................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....ATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGC.................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAGCGGCTGCAGAGC......	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................GTGCGATATAATTTGTTAACCAAGCCGC............................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0	0	0	0
....................GATATAATTTGTTAACCAAGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....ATGGCTGCAATTGTGCGATATA..............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...AATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGGCTGCAGAGCACACA.	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGCAGCCTGCAG........................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TGCGACTCTGCCTGGCAGCCTGCAA........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GACTCTGCCTGGCAGCCTG...........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGGCTGCAGAGCACACA.	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGGCTGCAGAGCA.....	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCTGCAG........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GACTCTGCCTGGCAGCCTGCA.........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.AAAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................G--C-TTCTTGCAGTTGCGACTCTGCCTG...................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....TGGCTGCAATTGTGCGATAT...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0	0	0	0
GAAAATGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACCAAGCCGCAATTAGGTAAATAGAGGCGAAGAATTC-GTT--TAAAAAGTGCTA-------ATTAGTGATTTAACTGTAGCATTCG--------CTGT------CCGCTTACT---------TGTGAGACTTGTTAAGCA--------------------AGTCGCTGCAAGCC-AGTAAAA--CAATCAT-TTCCCTTGCAACCAACTTATGTAATTTTTGCGCAAAGCAAAACAAAACGCA-AAGCAAA-GTT------------TCTGCGCAATT-------AATTGATTTG----ATC---ATGTG--C-TTCTTGCAGTTGCGACTCTGCCTGGCAGCCTGCAGCTGCAGCGGCTGCAGAGCACACAG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGC.................................	18	1	9.00	9	9	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGCA................................	20	1	4.00	4	4	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCTGCA.........................	23	1	3.00	3	3	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGC.................................	19	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCT............................	20	1	1.00	1	1	0	0	0	0	0
.............ATTGTGCGATATAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
..............TTGTGCGATATAATTTGTTA......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGCAGCCTGC..........................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGCAGCCTGCAGC.......................	28	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCC............................	20	1	1.00	1	1	0	0	0	0	0
......GGCTGCAATTGTGCGATATA..............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...AATGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..........................ATTTGTTAACCAAGCCGC............................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGGCTGCAGAGCACA...	19	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................GCGACTCTGCCTGGCAGCCTGCG.........................	23	1	1.00	1	1	0	0	0	0	0
....................GATATAATTTGTTAACCAAGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGCGGCTGCAGAGCACACA.	23	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CGACTCTGCCTGGCAGCCTGCAGCT......................	25	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGCAGCCTG...........................	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................GTTGCGACTCTGCCTGGCAGCCTGCA.........................	26	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GACTCTGCCTGGCAGCCTGCAGCTGC....................	26	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................AGTTGCGACTCTGCCTGGCAGCCTGCA.........................	27	1	1.00	1	1	0	0	0	0	0

droWil2

GATAATGGCTGCAATTGTGCGATTTAATTTGTTAACAAAACCGCAAATTGGTAAATAAAGGCCATAAACCT-AGT---TAAACCTG-----------ATAGCTTTTTA---GTTAA-------------AACGCGCTCTAGGCTTGATAATTAAATAT----------------------AAGTCAAGTGGCACTAAGCTTGTTAAGTGGCTAAAAT--CAATAAG-TTTT----------TATTACATAATTTTTGCTCATAGCAAAACAAAC-TCT-GTGCAGA--GA------------TGTA----AAA-------AAATAACTTT----TC-------AA--T-ACGTTTCAGTTGCGGCTTTGCCTGCCAGTCTGCAGTTGCAGCGGCTACAGAGCACTCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.ATAATGGCTGCAATTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	2	0
GATAATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	1	0	1	0
GATAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCGGCTACAGAGC......	19	1	2.00	2	0	0	1	1	0
GATAATGGCTGCAATTGT......................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................GTCTGCAGTTGCAGCGGCTACAGAGC......	26	1	1.00	1	0	0	0	1	0
.........................AATTTGTTAACAAAACCGCA...........................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
.............ATTGTGCGATTTAATTTGTTA......................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0
....................GATTTAATTTGTTAACAAAACCGC............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................CAGTTGCAGCGGCTACAGAGC......	21	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGTTGCAGCGGCTACAGA........	18	1	1.00	1	0	0	0	1	0
.ATAATGGCTGCAATTGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTTGCAGCGGCTACAGAG.......	18	1	1.00	1	0	1	0	0	0
.ATAATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................CAGTTGCAGCGGCTACAGA........	19	1	1.00	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................GTCTGCAGTTGCAGCGGCTACAGAGCA.....	27	1	1.00	1	0	0	0	1	0
...AATGGCTGCAATTGTGCGA..................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
............................TTGTTAACAAAACCGCAAA.........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTGCAGCGGCTACAGAG.......	22	1	1.00	1	0	1	0	0	0
GATAATGGCTGCAATTGTGCGATT................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
.....................ATTTAATTTGTTAACAAAACCGC............................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
............AATTGTGCGATTTAATTTGT........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..........................ATTTGTTAACAAAACCGCA...........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................GGCTTTGCCTGCCAGTCTGCAGTTGC....................	26	1	1.00	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................TGCAGTTGCAGCGGCTACAGA........	21	1	1.00	1	0	1	0	0	0
.............ATTGTGCGATTTAATTTGTTAACAA..................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GGCTTTGCCTGCCAGTCTGCA.........................	21	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................GCAGTTGCAGCGGCTACAGAGCAC....	24	1	1.00	1	0	0	1	0	0
................GTGCGATTTAATTTGTTAA.....................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................GCAGTTGCAGCGGCTACAGAGC......	22	1	1.00	1	0	0	0	1	0

droVir3

AAAAATGGCTGCAATAGTGCGATTTAATTTGTTAACAAAACCGCAATTTGGTAAATAAACAGTAGCGTTT----------TAGTTGTAGACTATTTTTTAAATGCCTTACAATATCATTGG--------ACAA----------T----TCGTGACGTT----------------------GGCAG-CAATGCTATA------TAAAGCT-AT---GT--TATAAAT-TTCAGTTGAAAACAAATTATGTAATTTCTGCGCACATAAAAACAAAA-GCTGTGGCGCA-CAT------------ATTGCATATTC------ATATTGATTTA----TTAT--AATTGCAA-TTTTTACAGTTGCGGCTCTGCCGGCCTCTCTGCAGTT---GCGCTTGCAGAGCACGCAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......................TTAATTTGTTAACAAAACCGC............................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................CCTCTCTGCAGTT---GCGCTTGCAGA........	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TGGCTGCAATAGTGCGATTTAAT............................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCCGGCCTCTCTGCAGTT---GCGCT..............	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................CGGCCTCTCTGCAGTT---GCGCT..............	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TT---GCGCTTGCAGAGCACGCA.	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TGGCTGCAATAGTGCGATTT...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AAAATGGCTGCAATAGTGCGATT................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................T---GCGCTTGCAGAGCACGCA.	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TGGCTGCAATAGTGCGATTTAA.............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GATTTAATTTGTTAACAAAACCGC............................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTCTGCAGTT---GCGCT..............	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TAACAAAACCGCAATTTGT.....................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTCTGCAGTT---GCGCTT.............	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................ACAA----------T----TCGTGACGTT----------------------GGCAG-T.............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AATGGCTGCAATAGTGCGATTTA..............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.....TGGCTGCAATAGTGCGATTTAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTAATTTGTTAACAAAACCGCAATTT.......................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AGTT---GCGCTTGCAGAGCACGCA.	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...AATGGCTGCAATAGTGCG...................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................ATTTGTTAACAAAACCGCA...........................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................AATTTGGTAAATAAACAGTAGCGT....................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............AATAGTGCGATTTAATTTGT........................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTCTGCAGTT---GCGC...............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GTGCGATTTAATTTGTTAACAAA.................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................TTTAATTTGTTAACAAAACCGC............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCCGGCCTCTCTGCA.........................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....ATGGCTGCAATAGTGCGATTTAAT............................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................CCGGCCTCTCTGCAGTT---GCGCT..............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....TGGCTGCAATAGTGCGATTTAATT...........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................GGCTCTGCCGGCCTCTCTGCAGTT---GCG................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................TTAATTTGTTAACAAAACCGCA...........................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ATAGTGCGATTTAATTTGTTAACAA..................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTT---GCGCTTGCAGAGCACGCC.	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................GGCCTCTCTGCAGTT---GCGCTTGCAGA........	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TGGCTGCAATAGTGCGATTTA..............................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTT---GCGCTTGCAGAGCACGCA.	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AAAATGGCTGCAATAGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GAAAATGGCTGCAATTGTGCGATATAATTTGTTAACAAAACCACAATTTGGTAAATACACAACG--------------TTGTAGACTTA-------AACTGTGGTGTAAATGTTTAATTGG--------GTAA----------C----CCGTTAAGTTGGCAGG----------------CATGC-TAGTTAAATCGGAGCCAGCTGGC-AT---ATTACAA--AATTTGTGTTCCAAACAAATTATGTAATTTCTGCGCACAACAAAACAAAA-AAA----------AAATTGCGCATTGATGAACT---AC-------TATTGATTTA----TATA--AATTGCATTATTTTGCAGTGGCTGCGTTGCCGGGCGCAGTACAGTT---GCGCTTGCAGAGCACTCAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................GTT---GCGCTTGCAGAGCACT...	19	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................GTT---GCGCTTGCAGAGCACTCAA	22	1	1.00	1	1	0	0	0	0	0
..................GCGATATAATTTGTTAACAAA.................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...........................TTTGTTAACAAAACCACAATTT.......................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................GCCGGGCGCAGTACAGTT---GC.................	20	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................GTACAGTT---GCGCTTGCAGAGCACTCAA	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................GTACAGTT---GCGCTTGCAGAGCACTC..	25	1	1.00	1	1	0	0	0	0	0
.....TGGCTGCAATTGTGCGATAT...............................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.............................TGTTAACAAAACCACAATTTGT.....................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......................................................................................................................TGG--------GTAA----------C----CCGTTAAGTTGGCAGG----------------C...................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.AAAATGGCTGCAATTGTGCGAT.................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................A----------AAATTGCGCATTGATGAACT---AC-------TA......................................................................................	25	1	1.00	1	0	0	0	0	1	0
...AATGGCTGCAATTGTGCGATATA..............................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............ATTGTGCGATATAATTTGTT.......................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.....TGGCTGCAATTGTGCGATA................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
........CTGCAATTGTGCGATATAATTTGTTAAC....................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0

droGri2

GAAAATGTCTGCAATTGTGCGATATAATTTGTTAACGAAACCGCAATTTGGTAAATAAACGCAAGTTCT------------------TA----ACTCGTGCATGCCTAACTTTATCATTGCCCAGCCAAGCTGCACA----------------------GTAGGCGTGGCATTTAGCGCGCAGCC-AGCTGGCATA------------------TAC--TAAACAT-TACACTTGCAAACAAATTATGTAATTTTTGCGCACATCAAAACAAAA-GTG-------------------------CTGCAAAATATAATTTATATTGATTTT---GTACAAAATTGG--A-TTATTGCAGTTGCGGCGCTGCCGTCGACTCTGCAGCT---GCGCCTACAGAGCACTCAG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................CGACTCTGCAGCT---GCGCC..............	18	1	1.00	1	1	0
.............ATTGTGCGATATAATTTGTTAAC....................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0

dsi_13855

2l:5857840-5858045 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-27.8	-27.5	-27.2