ID:dsi_13806 |
Coordinate:3r:10083596-10083652 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_10083509_10083595_+]; exon [3r_10083377_10083595_+]; CDS [3r_10083653_10084978_+]; exon [3r_10083653_10085215_+]; intron [3r_10083596_10083652_+]
No Repeatable elements found
| ##################################################---------------------------------------------------------################################################## CCAGCAATCCCAACGCCAGCTGCAGTGCATCCCGCTGGCTAACGGAGGAGGTATTTGCACGGATATGCAATTTGAAAATGATTTCATTGACATATTTCTGTTGTCAGGTCTTTAAACTAATCGAAATTGTGCAGCGCGACGAGGCCATCTACAATCC **************************************************......(((.((((((((((..(((((....)))))))).))))))).)))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M053 female body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .............................TCCCGCTGGCTAACGGAGG............................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ...........AACGCCAGCTGCAGTGCATCC............................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ................................................................................................TGTGTTGTCAGGTCTT............................................. | 16 | 1 | 4 | 1.00 | 4 | 4 | 0 | 0 | 0 |
| .................................................................................................GTGTTGTCAGGTCTT............................................. | 15 | 1 | 11 | 0.55 | 6 | 4 | 2 | 0 | 0 |
| ................................................................................................TGTGTTGTCAGGTCT.............................................. | 15 | 1 | 6 | 0.50 | 3 | 3 | 0 | 0 | 0 |
| .............................................AGGTGGTATTTGCAAGG............................................................................................... | 17 | 2 | 11 | 0.09 | 1 | 0 | 0 | 0 | 1 |
|
GGTCGTTAGGGTTGCGGTCGACGTCACGTAGGGCGACCGATTGCCTCCTCCATAAACGTGCCTATACGTTAAACTTTTACTAAAGTAACTGTATAAAGACAACAGTCCAGAAATTTGATTAGCTTTAACACGTCGCGCTGCTCCGGTAGATGTTAGG
**************************************************......(((.((((((((((..(((((....)))))))).))))))).)))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
GSM343915 embryo |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................TCCGGTAGGTGTTAGT | 16 | 2 | 20 | 0.35 | 7 | 7 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................CTGCTCCGGGAGATTTTA.. | 18 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................TACTCGAAACTTTTACTAAAGT....................................................................... | 22 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................CTAAAGTAACAGTATA.............................................................. | 16 | 1 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 |
| .....................................................................................................ACAGTCCAGAAAGTGGA....................................... | 17 | 2 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................TCCGGTTGATGTTAG. | 15 | 1 | 20 | 0.10 | 2 | 2 | 0 | 0 | 0 | 0 |
| ......................................................................AAACTTTTACTAGAGT....................................................................... | 16 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................TGCTCCGGTAGATGG.... | 15 | 1 | 16 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................ATCAGGTAGGGCGACCG...................................................................................................................... | 17 | 2 | 17 | 0.06 | 1 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................AGACAATGCTCCAGAAATT.......................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
| .....................................CGATTGCCTCCCCTA......................................................................................................... | 15 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:25 AM