ID:

dsi_13775

 Coordinate:

3r:1284289-1284454 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.3 -10.3

Flybase annnotation

five_prime_UTR [3r_1284455_1284538_-]; exon [3r_1284455_1284538_-]; five_prime_UTR [3r_1284050_1284288_-]; exon [3r_1283881_1284288_-]; intron [3r_1284289_1284454_-]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAAATTAAATCGAACGCGTAATTCACTTGTTACATTTGAGGAGTGCATGGTGAGTCCCAATTTCGAAGGTGTTTGAGATCCTTCGCGTCCCAAGATCCGTTTCTAAAATACAACTGCGACAGAAGCTGGGGTTCTAAGCCAAAAATCGATAATTGCCAAAACGAAATAGAAGCATAAAATTGAAGCAATTAACAAGTAATGTAATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCGGGAATATGCGAGCGGAGCAAGAGC
**********************************************************************************...((....(((.....(((((((..........((((..((.....((........)).....)).....))))..........)))))))......)))..)).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 O001
Testis
 O002
Head
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................................................................................................................................ATATTGTCCGTGAAGATGCG.............. 20 3 5 6.20 31 22 0 0 0 0 2 7 0 0 0 0 0
.................................................................................................................................................................................................................................................GGGAATATGCGAGCGGAGGA..... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
............................TGTTACATTTGAGGAGTGCATGG....................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GAATATGCGAGCGGAGCAAGAGC 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................................TATTGTGCGGGAATA.................. 15 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...............CGCGTAATTCACTTGTTACA....................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATAGAAGTATAGGATTGAAGC............................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................GAGTGCATGGTGAGTCCCAAT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...................TAATTCAATTGTTGAATTTGAGG................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................AGAAGCATAAAATTGAAGCA.............................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................CGGGAATATGCGAGCGGAG....... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..........................CTTGTTACATTTGAGGAG.............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................TTCGCGTCCCAAGATCCG...................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................ATATTGTCCGGGAAGATGCG.............. 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................TTTCGAAGGTGTTTGAGA........................................................................................................................................................................................... 18 0 18 0.22 4 0 0 0 0 4 0 0 0 0 0 0 0
...........................................................AATTTCGAAGGTGTT................................................................................................................................................................................................ 15 0 14 0.14 2 0 0 0 0 2 0 0 0 0 0 0 0
...............................TACATTTGAGTAGGGCATAGTG..................................................................................................................................................................................................................... 22 3 7 0.14 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................GTCGCAAGATCCCTTTGTA................................................................................................................................................................ 19 3 18 0.11 2 0 0 0 0 0 0 0 0 0 0 2 0
..............................................................TTCGAAGGTGTTTGAGA........................................................................................................................................................................................... 17 0 18 0.11 2 0 0 0 0 1 0 0 1 0 0 0 0
......TAAATCGAACGTGTA..................................................................................................................................................................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 0 0 0 0 0 0 1
..............................................................TTCGAAGGTGTTTGA............................................................................................................................................................................................. 15 0 19 0.11 2 0 0 0 0 1 0 0 0 1 0 0 0
.............................................................TTTCGAAGGTGTTTGAG............................................................................................................................................................................................ 17 0 19 0.11 2 0 0 0 0 2 0 0 0 0 0 0 0
.........................................................................................................................TGAAGCTGGAGTTCCAAGCC............................................................................................................................. 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................AAGCCTGAAAGTGAAGCAATT........................................................................... 21 3 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TAATTTCGAAGGTGTT................................................................................................................................................................................................ 16 1 17 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................ATTTCGAAGGTGTTTGAGA........................................................................................................................................................................................... 19 0 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................TTTCGAAGGTGTTTGAT............................................................................................................................................................................................ 17 1 19 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
................................................................CGAAGGTGTTTGAGA........................................................................................................................................................................................... 15 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0
...............................................................TCGAAGGTGTTTGAGA........................................................................................................................................................................................... 16 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CTTTTAATTTAGCTTGCGCATTAAGTGAACAATGTAAACTCCTCACGTACCACTCAGGGTTAAAGCTTCCACAAACTCTAGGAAGCGCAGGGTTCTAGGCAAAGATTTTATGTTGACGCTGTCTTCGACCCCAAGATTCGGTTTTTAGCTATTAACGGTTTTGCTTTATCTTCGTATTTTAACTTCGTTAATTGTTCATTACATTAGTTGAACGTCGGGCTTATTATATTCGTATAACACGCCCTTATACGCTCGCCTCGTTCTCG
******************************************************************************...((....(((.....(((((((..........((((..((.....((........)).....)).....))))..........)))))))......)))..)).********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
................................................................................................................................CCCCAAGATTCGGTTTTTAGCT.................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................AGGGTTCTAGGCAAACATTTT............................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................GTTAAAGCTTCCACAAACTCT........................................................................................................................................................................................... 21 0 13 0.38 5 1 0 0 0 4 0 0 0 0
.....................................................................................................................................CGATTCGGTTTTTAGCAATTAAT.............................................................................................................. 23 3 3 0.33 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................AGTTCGTTACTTGTTCATT.................................................................. 19 2 4 0.25 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................CGGTTATTAGCTATGAACG............................................................................................................. 19 2 4 0.25 1 0 0 1 0 0 0 0 0 0
................................................................................................................................CCCCAAGAGTCGGTTTTC........................................................................................................................ 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................TAAAGCTTCCACAAACTCT........................................................................................................................................................................................... 19 0 18 0.17 3 0 0 0 1 0 1 1 0 0
................................................................................GGAAATGCTGGGTTCTAGG....................................................................................................................................................................... 19 3 18 0.17 3 0 0 0 0 0 0 0 2 1
.............................................................AAAGCTTCCACAAACTCT........................................................................................................................................................................................... 18 0 18 0.11 2 0 0 0 0 0 1 0 1 0
........................................................AGGTTAAAGCTTCCACAAACTCT........................................................................................................................................................................................... 23 1 13 0.08 1 0 0 0 0 0 0 1 0 0
.......................................................AAGGTTAAAGCTTCCACAAACTCTGTGA....................................................................................................................................................................................... 28 3 13 0.08 1 0 0 0 1 0 0 0 0 0
...........................................................TTAAAGCTTCCACAAACTCT........................................................................................................................................................................................... 20 0 14 0.07 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................TTAATTGTTGGTGACATTAGT.......................................................... 21 3 16 0.06 1 0 0 0 0 0 1 0 0 0
.............................................................AAAGCTTCCACAAACT............................................................................................................................................................................................. 16 0 19 0.05 1 0 0 0 1 0 0 0 0 0
..................................................................................................................................CGAAGATTCGGTTTT......................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.................................................................................TACGCGCAGGGATCTAGG....................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0
...............................................................AGCTTCCACAAATTCT........................................................................................................................................................................................... 16 1 20 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1284239-1284504 - dsi_13775 GAAAATTA-AATCGAACGCGTAATTCACTTGTTACATTTGAG-------GAGTGCATGGTGAGTCCCAATTTCGAAGGTGTTTGAGATC---CT-TC---GCG--------T-CCCAAGATCC-----------GTTTCTA-A--------------------A----ATACAACTGCGACAGA--AGCTGGGGTTCTAAG-CCAAAAATCGATAA----TTGCCA-----------------------AAACGAAATAGAAGCATAAA-ATTG---AAGCAATTAACAAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCGGGAATATGCGAGC---GG--AGCAA----GAGC
droSec2 scaffold_6:1503756-1504021 - GAAAATTG-AATCGAACGCGTAATTCACTTGTTACATTTGAG-------GAGTGCATGGTGAGTCCCAATTTCGAAGGTGTTTGAGATC---CT-TC---GCG--------T-CCCAAGATCC-----------GTTTCTA-A--------------------A----ATACAACTGCGACAGA--AGCTGGGGTTCTAAG-CCAAAAATCGATAA----TTGCCA-----------------------AAACGAAATAGAAGCATAAA-ATTG---AAGCAATTAACCAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCGGGAATATGCGAGC---GG--AGGAA----GAGC
dm3 chr3R:1389045-1389313 - GAAAATTA-AATCGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTCCCTATCTCGATGGTGTTTGAGATC---CT-CC---GCG--------T-CCCAAGATCC-----------GTTTCTG-A--------------------A----ATAAAACTGGGACAGA--AGCTGGGGTTCTAAA-CCAAAAATCGATAATAAATTGCC------------------------AAACGAAATAGAAGCACAAA-ATTG---AAGCAATTAGCAAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCAGGAACATGCGAGC---GG--AGGAA----AAGC
droEre2 scaffold_4770:1658606-1658870 - GGAAAATT-ATTCGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTACCTAGTTCGATGGTAATTGAGATC---CT-TC---GCG--------T-CTCAAGTTCC-----------ATTTCTG-A--------------------A----ATGCAACTGGGACAGA--AGCTGGGGCTCAACG-CCAAAAATCGATAA----TTGTC------------------------GAACGAAATAGAAGCATAAA-ATTG---AAGCACTTAACAAGTAATGT---AATTAAATTGCAGTCCAAATAATAAAAGCATATTGTGCGGGAACATGCGAGC---GG--AGAAA----AAAC
droYak3 3R:17352780-17353043 - GAAAATAA-ATTTGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTGCCCAGCTCAATGGTATTTGAGTTC---CT-TC---GCG--------T-CTCAAGATCC-----------GTTTCTA-A--------------------A----ATACTACTGGAACAGA--AGTTGGGGCTCTAAG-CCAAAAATCGATAA----TTGCT------------------------TTACGAAATAGAAGCGTACA-ATTG---AATCTATTAACAAGTAATGT---AATCACATTCCAGCCCAAATAATATAA-CATATTGTGCGAAAGCATGCGAGC---GG--AGGAA----AAAC
droEug1 scf7180000409766:332579-332847 - GAAAATTA-A----AACGCGTAATTCGCTTGTTTATTTTGCG-------TAGTGCATGGTGAGTACCTTTTTCTTGGGAAATTGAGACC---CT-TG---TTT--------C-CCCTACTTGT-----------GTTCTTGG--A---------------CGAAACATATTGAACTCTGGCAGG--AGCAGAGGCTTTAAA-GCAAAAATCGATAA----TTGCC------------------------AAACGAAATACAAGCATAAA-GTGA---TGGCAATTAACAAATAATGT---AATCAAATTCCAGCACGAATAATAGAAGTATATTGTGCGGGAACATGCCAGC---GG--TGGAA----AAGC
droBia1 scf7180000302155:3384971-3385244 + GAAAATTGAAATCGAACGCGTAATTCGCTTGTTATTTCAGCG-------GAGTGCATGGTGAGTCCTTTTTTCGTGGGCTTTCGAGGCC---GT-TG---GGG--------C-CCGTAGATGC-----------GTGCCCCG-AA---------------CAAAAGGCATTGCACTTTGGCCGG--AGCAGAGCCTTAAGG-CCAAAAATCGATAA----TTGCC------------------------AAACGAAAAACGAGC-TAAA-ATTA---AAGTAATTAACAAGTAGTGT---AACCAAATTCCAGCCCGAATAATAGAAGCATATTGTGCGGGAACATGCGAGC---GG--CGGAA----GAGC
droTak1 scf7180000415754:415046-415318 + AAA-ACTA-AATCGAACGCGTAATTTGCTTGTAATTTAT-TA-------TTGTGCTAGGTGAGTGCCTTTTTCATGTGTTTTCGAGGTC---CT-CG---GTG--------T-CGGCAGATGC-----------GTTCCTCG-AA---------------AAGAACATATTGAACTCTGGCAGG--AGCAGAGCCCTCAAGTCCAAAAATCGATAA----TTGCC------------------------AAATGAAATACAAGCATAAA-AGTG---AAGCAATTTACAAGTAATGT---AATCAAATTCCAGCCCGAATAATAGAAGCATATTGTGCGGGAACATGCGAGC---GG--TGGAA----GCGC
droEle1 scf7180000491021:58493-58768 + GAAAATTAAAGTCGAACGCGTAATTCGCTTATTATTTTTAAG-------GAGTGCATGGTGAGTCCTAATTTCGGGGGTTTTTGATC-----CCCCA-AGGTG--------C-CCGGAAATGT-----------GTACTCTT-TA---------------GAAAACATATTGAACATTGGCAGA--AGTAAATGATTAAAT-ACAAAAATCGATAA----TTGCC------------------------AAACGAAATATAAGTATAAA-ATTG---AAGCAATTAACAAGTAATGT---AATCAAATTTCAGCCCGAATAATAGAAGCATATTGTGCGCGAGCATGCAAGC---GG--AGATA----GAGT
droRho1 scf7180000776798:13897-14173 + GAAAAGTAAAGTCAAACGCGTAATTCGCTAGTTATTTTTGTTATTGTTATTTTTCATGGTAAGTCCCTTTTTCGTCGTGTTTTGAGACA---CC-AG---CTG--------T-TTCCAGACGT-----------GTTCCTTT---------------------ACCATTTTGAACGCTGGCAGG--AGCAGAGGATTGAAA-CCAAAAATCGATAA----TTTCC------------------------AAACGAAATACAAGCATAAA-ATTG---AAGCAATTAACAAGAAATGT---AATCAAATTCTAGCCCGAATAATATAAAAACAGTAGAGGTGAGCATGCAAGC---AG--GGGAA----GATC
droFic1 scf7180000453850:787395-787664 - GAAAATTAAAATCAAACGCGTAATTCGCTTATAATTTTTGCG-------AAGT----GGTGAGTTTTTTCTTAGTTGGTATTTA-AACC---TC-TG---GTG--------T-TTTAAGATGT-----------GTTTGGTT-AA---------------ACAATCACTATGAGCGATGGCAGG--AGTACAGGCTTCAAT-ACAAAAATCGATAA----TTGCC------------------------AAACGAAATACAAACATAGT-ATTA---AAGCTATTAACAATAAATGT---AATCAAATTCTAATCCGAATAATAGAGGCGTATTGTGCTAGAACATGCGAGC---GG--GAGAA----GAGC
droKik1 scf7180000302461:812389-812667 - AAAAATTAAAATCGAACGCGTAATTCGCTTGCTATTCTCGCG-------GAGTGCATGGTGAGACCTTTTTTTATTACTTTTGTAAACT---CCCCA---GAG-CTCTCCGT-T--ATAATCG-----------ATT------TA---------------CCGAAAATATTTAACTCTGGCAGGAGAGCAAAGGCATC-GA-CCAAAAATCGATAA----TTGAA------------------------ACGAAA-ACGAAAAAGCAAA-AGTG---AGACAATTAACAAGTAATGT---AATCAAATTTCAGCTTGAATAATAGAGGCGCATTGTTCGGGAACATGCGACCAATGA--AGGAG----GAGC
droAna3 scaffold_13250:35682-35960 + GAAAATCTAATTCGGACGCGTAATTCAGTTGTTATTGGCGTG-------GAGTAGCTGGTGAGTAGACT---TGTTTGTTTTATA-TCCATTCGCAATAGAATCTCTGACAC-----AGTTGTACA----A---TT-------TATT-------------TGAAACGTATTGAAAGATGGCAGT--AGCAAAGTGCCCGAA-TCAAAAATCAATAA----TTGCC------------------------ATGCGA-ATACAAAAACAAA-ATTG---AAACAATTAACAAGTAATGAAAT-ATTGAATTACAGC-CGAATAATAGAAGCATATTGTCAAAGAACATGCGAGC---GG--GGC-------GGT
droBip1 scf7180000396413:590044-590320 + GAAAATATAATTCGGACGCGTAATTCAGTTGTTATTTTTGCG-------GAGTGCACGGTGAGTAGTTT---AGTTTGTTCTCTA-TCCATTCGCAT-TGATACCTTGACATTGTT-------AAA----A---ATT------T-TT-------------TGAAATGTATTGAATGATGCCAGT--AGCAAAAGCCCCAAA-TCAAAAATCAATAA----TTGCC------------------------ATGCGA-ATACAAAAACAAA-ATTG---AAACAATTAACAAGTAATGAAAT-ATCGAATTGCAGCCTGAATAATAGAAGCATATTGTCGAAGAACATGCGAGC---GG--GGC-------GGT
dp5 2:21211555-21211835 + AAAAATTC-AATTCAACGCGTAATTTAGTTGCTGTTTTCG----------TTTGCATGGTGAGTAAGTTTTTCC---------GAAAA----------------ACTGACAGTGCC-------AAATCGAAATTTT-------TGTTTGATACGAAATGATAAAAATTATTAAAGTTTGGCAAAAAAGCAGCTGAAATGAA-CTGAAAATCGATAT----TTGCC------------------------ACAAAA--AACAACTACAAATATTGCGACAACAATTAAAAAATAATGAAATAATCGACTTTCAGCTTGAATAATAGAAGCATATTGTTCGAGAACATGCATAC---GG--AGCG-----GGGG
droPer2 scaffold_3:3985931-3986211 + AAAAATTC-AATTCAACGCGTAATTTAGTTTCTGTTTTCG----------TTTGCATGGTGAGTAAGTTTTTCC---------GAAAA----------------AGTGACAGTGCC-------AAATCAAAATTAT-------TGTTTGATAGGAAATGATAAAAATTATTAAAGTTTGGCAAAAAAGCAGCTGAAATGAA-CTGAAAATCGATAT----TTGCC------------------------AAAAAAAA--CAACTACAAATATTGCGACAACAATTAAAAAATAATGAAATAATCGACTTTCAGCTTGAATAATAGAAGCATATTGTTCGAGAACATGCATAC---GG--AGCG-----GTGG
droWil2 scf2_1100000004943:3503521-3503560 + CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGTATGCAAATATGCGAAATATGAGCACCAG----AGGT
droVir3 scaffold_13047:16648125-16648224 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCT------------------------AAAAAGCAAATGT-----------G---CAACA----AAAAATAAATT---AAATCAATTACAGATTAAATTATAGAA----------------CATGCAAAATATGCATAAAAGAGGCGTAC
droMoj3 scaffold_6540:12955553-12955654 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCTAAAAAGCAGAGTCGGAGAATTGGCATTCAGAA--CGTTT-------------------------------AC---GAACCTATTGCAGATTAAATTATAG----------------AACATGCAAATTATG---AATAA----TAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAAAATTA-AATCGAACGCGTAATTCACTTGTTACATTTGAG-------GAGTGCATGGTGAGTCCCAATTTCGAAGGTGTTTGAGATC---CT-TC---GCG--------T-CCCAAGATCC-----------GTTTCTA-A--------------------A----ATACAACTGCGACAGA--AGCTGGGGTTCTAAG-CCAAAAATCGATAA----TTGCCA-----------------------AAACGAAATAGAAGCATAAA-ATTG---AAGCAATTAACAAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCGGGAATATGCGAGC---GG--AGCAA----GAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................TGTTACATTTGAG-------GAGTGCATGG.........................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................GAATATGCGAGC---GG--AGCAA----GAGC2311.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................TATTGTGCGGGAATA...........................1511.00100000001000000000
................CGCGTAATTCACTTGTTACA................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
.................................................GAGTGCATGGTGAGTCCCAAT..............................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................AGAAGCATAAA-ATTG---AAGCA..........................................................................................2011.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................CGGGAATATGCGAGC---GG--AG...........1911.00100000000000001000
...........................CTTGTTACATTTGAG-------GAG................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.............................................................................................T-TC---GCG--------T-CCCAAGATCC-----------G.............................................................................................................................................................................................................................................1811.00100001000000000000
.....................................................................TTTCGAAGGTGTTTGAGA.............................................................................................................................................................................................................................................................................................18180.22400000000004000000
...................................................................AATTTCGAAGGTGTT..................................................................................................................................................................................................................................................................................................15140.14200000000002000000
......................................................................TTCGAAGGTGTTTGAGA.............................................................................................................................................................................................................................................................................................17180.11200000000011000000
......................................................................TTCGAAGGTGTTTGA...............................................................................................................................................................................................................................................................................................15190.11200000001001000000
.....................................................................TTTCGAAGGTGTTTGAG..............................................................................................................................................................................................................................................................................................17190.11200000000002000000
....................................................................ATTTCGAAGGTGTTTGAGA.............................................................................................................................................................................................................................................................................................19180.06100000000001000000
.....................................................................TTTCGAAGGTGTTTGAT..............................................................................................................................................................................................................................................................................................17190.05100000000001000000
........................................................................CGAAGGTGTTTGAGA.............................................................................................................................................................................................................................................................................................15200.05100000000001000000
.......................................................................TCGAAGGTGTTTGAGA.............................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
GAAAATTG-AATCGAACGCGTAATTCACTTGTTACATTTGAG-------GAGTGCATGGTGAGTCCCAATTTCGAAGGTGTTTGAGATC---CT-TC---GCG--------T-CCCAAGATCC-----------GTTTCTA-A--------------------A----ATACAACTGCGACAGA--AGCTGGGGTTCTAAG-CCAAAAATCGATAA----TTGCCA-----------------------AAACGAAATAGAAGCATAAA-ATTG---AAGCAATTAACCAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCGGGAATATGCGAGC---GG--AGGAA----GAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................AATTCACTTGTTACATTTGAG-------GAGTGC.............................................................................................................................................................................................................................................................................................................................2711.0010100
...............................TTACATTTGAG-------GAGTGCATGGT........................................................................................................................................................................................................................................................................................................................2211.0010100
....................................TTTGAG-------GAGTGCATGGTGAG.....................................................................................................................................................................................................................................................................................................................2011.0010100
...........................CTTGTTACATTTGAG-------GAG................................................................................................................................................................................................................................................................................................................................1811.0010010
...................................................................AATTTCGAAGGTGTTTGAGATC---CT-TC---GC..............................................................................................................................................................................................................................................................................2811.0011000
..........................................................................................................................................................................................................................................................................................................................................TATTGTGCGGGAATATGCG.......................1911.0010100
dm3
GAAAATTA-AATCGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTCCCTATCTCGATGGTGTTTGAGATC---CT-CC---GCG--------T-CCCAAGATCC-----------GTTTCTG-A--------------------A----ATAAAACTGGGACAGA--AGCTGGGGTTCTAAA-CCAAAAATCGATAATAAATTGCC------------------------AAACGAAATAGAAGCACAAA-ATTG---AAGCAATTAGCAAGTAATGT---AATCAACTTGCAGCCCGAATAATATAAGCATATTGTGCAGGAACATGCGAGC---GG--AGGAA----AAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................TTGCG-------GAGTGCATGGTGAG.....................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000200000000010
.................................................GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000000001000
........................................CG-------GAGTGCATGGTGAGTC...................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000
...................................ATTTGCG-------GAGTGCATGGT........................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000011000
...................................ATTTGCG-------GAGTGCATGGTGAG.....................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000110
........................................CG-------GAGTGCATGGTGAGTCCC.................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
GAAAATTA-AATCGAACGCG................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................ATTTGCG-------GAGTGCATGGTGA......................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000010000000000000000
.................................ACATTTGCG-------GAGTGCATG..........................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000
.................................................GAGTGCATGGTGAGTCCC.................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
..........................ACTTGTTACATTTGCG-------GAG................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000020000
...................................ATTTGCG-------GAGTGCATGGTG.......................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000200000000000000000
........................................CG-------GAGTGCATGGTGAGTCC..................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000100
............CGAACGCGTAATTCACTTGTT...................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GTGCATGGTGAGTCCCTA...............................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................TGCG-------GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000
..................................................AGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................TTTGCG-------GAGTGCATGGTGAG.....................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
................CGCGTAATTCACTTGTTACA................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTA-AATCGAACGCGTAATTCAC........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACATGCGAGC---GG--AGGAA----....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................ATTTGCG-------GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................TC---CT-CC---GCG--------T-CCCAAGATCC-----------G.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................TCCCTATCTCGATGGTGTTTG................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAAATTA-AATCGAACGCG................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCGATGGTGTTTGAGATC---CT-C....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................GGACAGA--AGCTGGGGTTCTA.............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTCCCTATCTCGATGGTGTTTGAG..............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCAGGAACATGCGAGC---GG--AG...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TTTGCG-------GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....ATTA-AATCGAACGCGTAATTCACTTGT....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACTTGTTACATTTGCG-------GAGTGCATG..........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................ACTTGTTACATTTGCG-------GA.................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGCG-------GAGTGCATGGTGAGTCC..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................AGATCC-----------GTTTCTG-A--------------------A----ATAAAA......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................TTTGCG-------GAGTGCATGGTGAGTCCC.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACATTTGCG-------GAGTGCATGGTGAGTCCC.................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATC---CT-CC---GCG--------T-CCCAAGA............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................TTGCG-------GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTCCCTATCTCGATGGTGTTTG................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................ATTTGCG-------GAGTGCATGGTGAGTC...................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................GTTACATTTGCG-------GAGTGCAT...........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATATTGTGCAGGAACATGCGAGC---.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.................................................GAGTGCATGGTGAGTCCCTA...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................TACATTTGCG-------GAGTGCATG..........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CACAAA-ATTG---AAGCAATTAGCAAGTAATG............................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................GATGGTGTTTGAGATC---CT-CC---GCG--------.....................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAAATTA-AATCGAACGCGTAAT............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................AATTCACTTGTTACATTTGCG-------...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CATTTGCG-------GAGTGCATGGA........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AATTA-AATCGAACGCGTA..............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..AAATTA-AATCGAACGCGTAATTC..........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GAAAATTA-AATCGAACGCGTAAT............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGCG-------GAGTGCATGGTGAGTC...................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAAACTGGGACAGA--AGCTGGGG..................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................ATTCACTTGTTACATTTGCG-------...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACTTGTTACATTTGCG-------GAGT...............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GGTGTTTGAGATC---CT-CC---G...............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................GTCCCTATCTCGATGGTG....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AACTGGGACAGA--AGCTGGGGTTCTAAA-..........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGCG-------GAGTGCATGGTGAG.....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GTGCAGGAACATGCGAGC---GG--A............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GTTACATTTGCG-------GAGTGCATGGTGA......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................TGCATGGTGAGTCCCTATCTCGAT........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATTTGCG-------GAGTGCATGGTGAGTCCCTAT..............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................TGTTACATTTGCG-------GAGTG..............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................TTGTTACATTTGCG-------GAGTGC.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................TTTGCG-------GAGTGCATGGT........................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TGGTGTTTGAGATC---CT-CC---................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CTTGTTACATTTGCG-------GAGTGCA............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACGAAATAGAAGCACAAA-ATTG---AAGCA..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................C------------------------AAACGAAATAGAAGCACA.........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACATTTGCG-------GAGTGCATGGTGAGTCCCT................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................TGCATGGTGAGTCCCTATCTCG..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............GAACGCGTAATTCACTTG.....................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................TTGCG-------GAGTGCATGGTGAGTCCCTA...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................GTTTGAGATC---CT-CC---GCG--------T-CCC................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................TTGCG-------GAGTGCATGGTGA......................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...................................ATTTGCG-------GAGTGCATGGAAC......................................................................................................................................................................................................................................................................................................................2090.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA-AATCGAACGCGTAATTCA.........................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGAAAATT-ATTCGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTACCTAGTTCGATGGTAATTGAGATC---CT-TC---GCG--------T-CTCAAGTTCC-----------ATTTCTG-A--------------------A----ATGCAACTGGGACAGA--AGCTGGGGCTCAACG-CCAAAAATCGATAA----TTGTC------------------------GAACGAAATAGAAGCATAAA-ATTG---AAGCACTTAACAAGTAATGT---AATTAAATTGCAGTCCAAATAATAAAAGCATATTGTGCGGGAACATGCGAGC---GG--AGAAA----AAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................GTTACATTTGCG-------GAGTGCATGTC........................................................................................................................................................................................................................................................................................................................2311.0011000000
....................................TTTGCG-------GAGTGCATGGTGAGTACCTA...............................................................................................................................................................................................................................................................................................................2611.0010000100
.........................................................................................................................................................................................................................................................................................................................................ATATTGTGCGGGAACATGCGAGC---.................2311.0010000100
droYak3
GAAAATAA-ATTTGAACGCGTAATTCACTTGTTACATTTGCG-------GAGTGCATGGTGAGTGCCCAGCTCAATGGTATTTGAGTTC---CT-TC---GCG--------T-CTCAAGATCC-----------GTTTCTA-A--------------------A----ATACTACTGGAACAGA--AGTTGGGGCTCTAAG-CCAAAAATCGATAA----TTGCT------------------------TTACGAAATAGAAGCGTACA-ATTG---AATCTATTAACAAGTAATGT---AATCACATTCCAGCCCAAATAATATAA-CATATTGTGCGAAAGCATGCGAGC---GG--AGGAA----AAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................GAAAGCATGCGAGC---GG--AGG..........1911.00100000010000
droEug1
GAAAATTA-A----AACGCGTAATTCGCTTGTTTATTTTGCG-------TAGTGCATGGTGAGTACCTTTTTCTTGGGAAATTGAGACC---CT-TG---TTT--------C-CCCTACTTGT-----------GTTCTTGG--A---------------CGAAACATATTGAACTCTGGCAGG--AGCAGAGGCTTTAAA-GCAAAAATCGATAA----TTGCC------------------------AAACGAAATACAAGCATAAA-GTGA---TGGCAATTAACAAATAATGT---AATCAAATTCCAGCACGAATAATAGAAGTATATTGTGCGGGAACATGCCAGC---GG--TGGAA----AAGCSizeHit CountTotal NormTotal
No Reads
droBia1
GAAAATTGAAATCGAACGCGTAATTCGCTTGTTATTTCAGCG-------GAGTGCATGGTGAGTCCTTTTTTCGTGGGCTTTCGAGGCC---GT-TG---GGG--------C-CCGTAGATGC-----------GTGCCCCG-AA---------------CAAAAGGCATTGCACTTTGGCCGG--AGCAGAGCCTTAAGG-CCAAAAATCGATAA----TTGCC------------------------AAACGAAAAACGAGC-TAAA-ATTA---AAGTAATTAACAAGTAGTGT---AACCAAATTCCAGCCCGAATAATAGAAGCATATTGTGCGGGAACATGCGAGC---GG--CGGAA----GAGCSizeHit CountTotal NormTotal
No Reads
droTak1
AAA-ACTA-AATCGAACGCGTAATTTGCTTGTAATTTAT-TA-------TTGTGCTAGGTGAGTGCCTTTTTCATGTGTTTTCGAGGTC---CT-CG---GTG--------T-CGGCAGATGC-----------GTTCCTCG-AA---------------AAGAACATATTGAACTCTGGCAGG--AGCAGAGCCCTCAAGTCCAAAAATCGATAA----TTGCC------------------------AAATGAAATACAAGCATAAA-AGTG---AAGCAATTTACAAGTAATGT---AATCAAATTCCAGCCCGAATAATAGAAGCATATTGTGCGGGAACATGCGAGC---GG--TGGAA----GCGCSizeHit CountTotal NormTotal
No Reads
droEle1
GAAAATTAAAGTCGAACGCGTAATTCGCTTATTATTTTTAAG-------GAGTGCATGGTGAGTCCTAATTTCGGGGGTTTTTGATC-----CCCCA-AGGTG--------C-CCGGAAATGT-----------GTACTCTT-TA---------------GAAAACATATTGAACATTGGCAGA--AGTAAATGATTAAAT-ACAAAAATCGATAA----TTGCC------------------------AAACGAAATATAAGTATAAA-ATTG---AAGCAATTAACAAGTAATGT---AATCAAATTTCAGCCCGAATAATAGAAGCATATTGTGCGCGAGCATGCAAGC---GG--AGATA----GAGTSizeHit CountTotal NormTotal
No Reads
droRho1
GAAAAGTAAAGTCAAACGCGTAATTCGCTAGTTATTTTTGTTATTGTTATTTTTCATGGTAAGTCCCTTTTTCGTCGTGTTTTGAGACA---CC-AG---CTG--------T-TTCCAGACGT-----------GTTCCTTT---------------------ACCATTTTGAACGCTGGCAGG--AGCAGAGGATTGAAA-CCAAAAATCGATAA----TTTCC------------------------AAACGAAATACAAGCATAAA-ATTG---AAGCAATTAACAAGAAATGT---AATCAAATTCTAGCCCGAATAATATAAAAACAGTAGAGGTGAGCATGCAAGC---AG--GGGAA----GATCSizeHit CountTotal NormTotal
No Reads
droFic1
GAAAATTAAAATCAAACGCGTAATTCGCTTATAATTTTTGCG-------AAGT----GGTGAGTTTTTTCTTAGTTGGTATTTA-AACC---TC-TG---GTG--------T-TTTAAGATGT-----------GTTTGGTT-AA---------------ACAATCACTATGAGCGATGGCAGG--AGTACAGGCTTCAAT-ACAAAAATCGATAA----TTGCC------------------------AAACGAAATACAAACATAGT-ATTA---AAGCTATTAACAATAAATGT---AATCAAATTCTAATCCGAATAATAGAGGCGTATTGTGCTAGAACATGCGAGC---GG--GAGAA----GAGCSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAATTAAAATCGAACGCGTAATTCGCTTGCTATTCTCGCG-------GAGTGCATGGTGAGACCTTTTTTTATTACTTTTGTAAACT---CCCCA---GAG-CTCTCCGT-T--ATAATCG-----------ATT------TA---------------CCGAAAATATTTAACTCTGGCAGGAGAGCAAAGGCATC-GA-CCAAAAATCGATAA----TTGAA------------------------ACGAAA-ACGAAAAAGCAAA-AGTG---AGACAATTAACAAGTAATGT---AATCAAATTTCAGCTTGAATAATAGAGGCGCATTGTTCGGGAACATGCGACCAATGA--AGGAG----GAGCSizeHit CountTotal NormTotal
No Reads
droAna3
GAAAATCTAATTCGGACGCGTAATTCAGTTGTTATTGGCGTG-------GAGTAGCTGGTGAGTAGACT---TGTTTGTTTTATA-TCCATTCGCAATAGAATCTCTGACAC-----AGTTGTACA----A---TT-------TATT-------------TGAAACGTATTGAAAGATGGCAGT--AGCAAAGTGCCCGAA-TCAAAAATCAATAA----TTGCC------------------------ATGCGA-ATACAAAAACAAA-ATTG---AAACAATTAACAAGTAATGAAAT-ATTGAATTACAGC-CGAATAATAGAAGCATATTGTCAAAGAACATGCGAGC---GG--GGC-------GGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
GAAAATCTAATTCGGACGCGT...............................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................GCGTG-------GAGTAGCTGGTGA......................................................................................................................................................................................................................................................................................................................1811.001000001
..........................AGTTGTTATTGGCGTG-------GAGT...............................................................................................................................................................................................................................................................................................................................2011.001000100
......................ATTCAGTTGTTATTGGCGTG-------GAGTAGC............................................................................................................................................................................................................................................................................................................................2711.001100000
.................................ATTGGCGTG-------GAGTAGCTGCC........................................................................................................................................................................................................................................................................................................................2020.501010000
droBip1
GAAAATATAATTCGGACGCGTAATTCAGTTGTTATTTTTGCG-------GAGTGCACGGTGAGTAGTTT---AGTTTGTTCTCTA-TCCATTCGCAT-TGATACCTTGACATTGTT-------AAA----A---ATT------T-TT-------------TGAAATGTATTGAATGATGCCAGT--AGCAAAAGCCCCAAA-TCAAAAATCAATAA----TTGCC------------------------ATGCGA-ATACAAAAACAAA-ATTG---AAACAATTAACAAGTAATGAAAT-ATCGAATTGCAGCCTGAATAATAGAAGCATATTGTCGAAGAACATGCGAGC---GG--GGC-------GGTSizeHit CountTotal NormTotal
No Reads
dp5
AAAAATTC-AATTCAACGCGTAATTTAGTTGCTGTTTTCG----------TTTGCATGGTGAGTAAGTTTTTCC---------GAAAA----------------ACTGACAGTGCC-------AAATCGAAATTTT-------TGTTTGATACGAAATGATAAAAATTATTAAAGTTTGGCAAAAAAGCAGCTGAAATGAA-CTGAAAATCGATAT----TTGCC------------------------ACAAAA--AACAACTACAAATATTGCGACAACAATTAAAAAATAATGAAATAATCGACTTTCAGCTTGAATAATAGAAGCATATTGTTCGAGAACATGCATAC---GG--AGCG-----GGGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................TGACAGTGCC-------AAATCGAAATT..............................................................................................................................................................................................................................................2112.0020200000000
.......................................................................TCC---------GAAAA----------------ACTGACAGTGCC-------A........................................................................................................................................................................................................................................................2111.0010000001000
.............................................................................................................................................................................................................................................................................................................................AATAATAGAAGCATATTGTT...................................2011.0010100000000
.........................TAGTTGCTGTTTTCG----------TTTGC.............................................................................................................................................................................................................................................................................................................................2011.0010000000010
........................................................................................................................................................................................AAAGCAGCTGAAATGAA-CTG.......................................................................................................................................................................2011.0011000000000
.............................................................................................................................................................................................AGCTGAAATGAA-CTGAAAAT..................................................................................................................................................................2011.0010000000010
..................................TTTTCG----------TTTGCATGGTGAGTAAGT................................................................................................................................................................................................................................................................................................................2411.0010000001000
.................................................................................................................................................................................................................................................................................................................................................CGAGAACATGCATAC---GG--AGCG-----GG..2311.0010100000000
.....TTC-AATTCAACGCGTAATTTAGTTG.....................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................CGCGTAATTTAGTTGCTG..................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
.........................................................................................................................................................................................AAGCAGCTGAAATGAA-CTG.......................................................................................................................................................................1911.0011000000000
.............................................................................................................................................................................................................................................................................................................................AATAATAGAAGCATATTGTTCGA................................2311.0010100000000
...................................................................................................................................................................................................................................................................................................................................................AGAACATGCATAC---GG--AGCG-----G...2011.0010100000000
droPer2
AAAAATTC-AATTCAACGCGTAATTTAGTTTCTGTTTTCG----------TTTGCATGGTGAGTAAGTTTTTCC---------GAAAA----------------AGTGACAGTGCC-------AAATCAAAATTAT-------TGTTTGATAGGAAATGATAAAAATTATTAAAGTTTGGCAAAAAAGCAGCTGAAATGAA-CTGAAAATCGATAT----TTGCC------------------------AAAAAAAA--CAACTACAAATATTGCGACAACAATTAAAAAATAATGAAATAATCGACTTTCAGCTTGAATAATAGAAGCATATTGTTCGAGAACATGCATAC---GG--AGCG-----GTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................GAGAACATGCATAC---GG--AGCG-----GTG.2320.501010000
.....................AATTTAGTTTCTGTTTTCG----------TTTGC.............................................................................................................................................................................................................................................................................................................................2430.331100000
.AAAATTC-AATTCAACGCGTA..............................................................................................................................................................................................................................................................................................................................................................2030.331001000
......................................CG----------TTTGCATGGTGAGTAAGTT...............................................................................................................................................................................................................................................................................................................2130.331000001
......................ATTTAGTTTCTGTTTTCG----------TTTGCATGC.........................................................................................................................................................................................................................................................................................................................2730.331000001
...................................................TTGCATGGTGAGTAAGTTTTT............................................................................................................................................................................................................................................................................................................2130.331000001
......................................................................TTCC---------GAAAA----------------AGTGACAGTGCC-------.........................................................................................................................................................................................................................................................2130.331001000
....................................................................................................................................................................................................................................................................................................................................................GAACATGCATAC---GG--AGCG-----GTGG2230.331000001
....................................................................................................................................................................................................................................................................................................................................................GAACATGCATAC---GG--AGCG-----GTG.2130.331010000
......................................................................................................................................AT-------TGTTTGATAGGAAATGAT...................................................................................................................................................................................................................2030.331010000
droWil2
CA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGTATGCAAATATGCGAAATATGAGCACCAG----AGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................AATATGCGAAATATGAGCACCAG----AG..2511.00100100
.......................................................................................................................................................................................................................................................................................................................................................TATGCGAAATATGAGCACCAG----....2111.00101000
droVir3
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCT------------------------AAAAAGCAAATGT-----------G---CAACA----AAAAATAAATT---AAATCAATTACAGATTAAATTATAGAA----------------CATGCAAAATATGCATAAAAGAGGCGTACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCT------------------------AAAAAGCAAATGT-----------...................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
.A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCT------------------------AAAAAGCAAATGT-----------...................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GATTAAATTATAGAA----------------CATGCAAA.....................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATAA----TTGCTAAAAAGCAGAGTCGGAGAATTGGCATTCAGAA--CGTTT-------------------------------AC---GAACCTATTGCAGATTAAATTATAG----------------AACATGCAAATTATG---AATAA----TAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 10:57 AM