ID:

dsi_13651

 Coordinate:

2l:8158333-8158482 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.8

Flybase annnotation

CDS [2l_8158471_8158670_-]; three_prime_UTR [2l_8158004_8158471_-]; exon [2l_8158004_8158670_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
ATTATCGCCGGAAGCAGCAGCAACTACACCTGCACAAGCAGCGCTTTTTTGTCACATGCTGATTTAGATTTGATTTGGAAACAATTTGGTTTCACCTATATAAGCCTCCTCTTTGTTGGATGGCAAATTCTTGTTGACCATATTTCTTTACGTTGCGCAGCGTAAAATTAACGCTTTAATTTATTGAATACATTTAGTGTACTTAGTAGGATTTTCTATTTAGTTGCAAAAGACGCACAGTTAGTATTTG
*****************************************************....((..(((((.....((...((.........(((...)))........))...)).....))))).))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902009
testis
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O001
Testis
 O002
Head
....................................................................................................................................................................................................GTGTACTTAGTAGGATTTTCT................................. 21 0 1 4.00 4 0 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTAGTGTACTTAGTAGGATT..................................... 21 0 1 4.00 4 1 2 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................GTACTTAGTAGGATTTTCTAT............................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.........................................................................................................CTCCTCTTTGTTGGATGGC.............................................................................................................................. 19 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0
..................................................................................................................................................................................................TAGTGTACTTAGTAGGATTTTCTATT.............................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................TTGTTGGATGGCAAATTCTTG..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................ACATGCTGATTTAGATTTGAT................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAGTTGCAAAAGACGCACAGT......... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................TAGGATTTTCTATTTAGTTGC....................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................TTTTGTCACATGCTGATTTAGATTTGATT............................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................TACTTAGTAGGATTTTCTATT.............................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................CATTTAGTGTACTTAGTAGGA....................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CACATTTAGTGTACTTAGTAGG........................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................AGATTTGATTTGGAAACAATT.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................ACATTTAGTGTACTTAGTAGG........................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................TTTAGTGTACTTAGTAGGATTTTCTAT............................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTTCTATTTAGTTGCAAAAGACGCACAGT......... 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TAGTGTACTTAGTAGGATTTT................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.................................................................................................ATATAAGCCTCCTCTTTGTTG.................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TAGGATTTTCTATTTAGTTGCA...................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTAGTAGGATTTTCTATT.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TACTTAGTAGGATTTTCTATTTAGT.......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CTATTTAGTTGCAAAAGACGCACAG.......... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................TTCTATTTAGTTGCAAAAGACGCACAGT......... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................TTCTTGTTGACCATATTTCTTTACGT................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TCTATTTAGTTGCAAAAGACG............... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................TATTTCTTTACGTTGGGC............................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTGCAAAAGACGCACAGTTAGTATT.. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TATTTAGTTGCAAAAGACGCACAG.......... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1
...............................................TTTGTCACATGCTGATTTAGATTTGAT................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................TACGTTGCGCAGCGTAAAA................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TCTTTGTTGGATGGCAAATTCTTGT.................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................AGTTGCAAAAGACGCACAGT......... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTAATGTACTTAGTCGGA....................................... 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................TGATTGGGAAACAATATGG................................................................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................TGGATAAGCGGCGCTTTTTT........................................................................................................................................................................................................ 20 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................GATTGGGAAACAATATGG................................................................................................................................................................. 18 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTGAAATTAACGCTT.......................................................................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
......................................................CGTGCTGATTTAGTTTTGT................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TAATAGCGGCCTTCGTCGTCGTTGATGTGGACGTGTTCGTCGCGAAAAAACAGTGTACGACTAAATCTAAACTAAACCTTTGTTAAACCAAAGTGGATATATTCGGAGGAGAAACAACCTACCGTTTAAGAACAACTGGTATAAAGAAATGCAACGCGTCGCATTTTAATTGCGAAATTAAATAACTTATGTAAATCACATGAATCATCCTAAAAGATAAATCAACGTTTTCTGCGTGTCAATCATAAAC
******************************************************************************************************************************....((..(((((.....((...((.........(((...)))........))...)).....))))).))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M025
embryo
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
..................................................................................................................................................................................................................................GTTTTCTGCGTGTCAATCATA... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTTCTGCGTGTCAATCATAAA. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TCCTAAAAGATAAATCAACGTTT.................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTTCTGCGTGTCAATCAT.... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CTGCGTGTCAATCATAAA. 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TCCTAAAAGATAAATCAACGT...................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................................................AGAACAACTGGTATAAAGAAA..................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.................GTCGTTGATGTGGACGTGTTCGT.................................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................TTTAATTGCGAAATTAAATAACTTATGT.......................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................TTTTCTGCGTGTCAATCATA... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................CGCGAAAAAACAGTGTACGGC............................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTCTGCGTTTCAATCATAAAC 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTCTGCGTGTCAATCATAAAC 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AAATCAACGTTTTCTGCGTGTCAAT....... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................TAAATCAACGTTTTCTGCGTG............ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................TTGCGAAATTAAATAACTTAT............................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................................................CCTAAAAGATAAATCAACGTTTTC.................. 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................GTGGTATGAAGAAATGCAACGT............................................................................................. 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................GAGGTATAAAGAAATGGAACGC............................................................................................. 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................AAGAACTACTGGTATGAAG........................................................................................................ 19 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................AAGAACAAGTGGTATGAAG........................................................................................................ 19 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................AAGAACGACAGGTATAAAG........................................................................................................ 19 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
...........................TGGACGTGCTTGTCGTGAAA........................................................................................................................................................................................................... 20 3 20 0.10 2 0 0 0 0 0 0 2 0 0 0
....AGAGGCCTTCGTCGTCA..................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..ATAGCGGCCTGCGTAG........................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................GCTTTTTAATTGCGA........................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8158283-8158532 - dsi_13651 ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCACATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTG
droSec2 scaffold_3:3927641-3927890 - ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTAATTG
dm3 chr2L:8431350-8431603 - ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCATAAGCAGCGCTTTTTTGTCAGATGCTGAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AGAA-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAA-GTTA----GTATTTG
droEre2 scaffold_4929:17339993-17340272 - ATTA---TCGCCGAAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGGG-ACC----TT-----------CG--AA---GA---GGAGAGG---TGC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT---------------C---------TTT----GTTGATTGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTG
droYak3 2L:11069329-11069622 - ATTA---TCGCCGGAAACAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTAAGATGCTGAGAG-ACC----TT-----------TG--AT---GG---GGAGAGA---TCC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTCAAATTGGATA--TA-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----TGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT--CTTTCT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTG
droEug1 scf7180000409461:457026-457315 - ATTA---CCGGCGGAAGCAGCAACAACT---ACACCTGCAAAAGCAGCGCTTTTTTGTCAGATGTTAAAGG-ACC----TC-----------CGAGAAAAAAA---GGAGATG---TCC-------------------------------TTC----------------------------------------------------------------------TCCT-TAA--A--------------CTT------------CG-A-----TTT-GA-TTTGGAAACACT-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------T-----CGCCT---------------G---------ATT----TTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT----TTCT----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droBia1 scf7180000301500:211065-211347 + ACTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTCGTCACTTGTTGAGGG-AGCATCCTC-----------CG------------GGAGAGG---TCC--------------------------------------------------------------------------------------------------------TCCACTCG--G--------------TTC------------AG-A-----TTT-GA-TTTGGAAACAAC-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------G-----GGACT---------------CTCCTTT---TTT----GTTGGTTGGC-AATT----GGTCGACCA----------TTT------CA----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATTTTAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droTak1 scf7180000415629:148875-149175 - ATTA---TCGCCGGAAGCAGCAACAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGAG-ACCGACCTT-----------CG--AAAAATA---GGAGAGGTGGTCC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTT------------TG-A-----TTT-GA-TTTGGAAACAAC-TTT-GG-TTTCGC-----------C---------------------------TA--CAT------------A-----CGACT-------TTTT----CTTTTTT---TTT----GTTGAATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droEle1 scf7180000491186:1221079-1221382 - ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGTG-GCC----TC-------CAC-CG--AA---CT---GGAGAGG---TCC--------------------------------------------------------------------------------------------------------TCCTCTGGCCA--------------TT---ATTCGATT--TG-A-----TTC-GA-TTTGGAAACAAT-TTT-GG-TTTCGC-----------C---------------------------TA--TA-------ATCTATAATGTTCGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAAAGTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droRho1 scf7180000779312:443597-443877 + ATTA---TCGCCGGAAGCAGCAGCAACT---TCACCTGCATAAGCAGCGCTTTTTTGTTAGATGCTGAGAG-ACC----TC-----------CG--AA---TA---GGAGAGA---TCC--------------------------------------------------------------------------------------------------------TCCTTTGG--A--------------TTT------------TG-T-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----CGCCT---------------C---------TTT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGCAAA-GTTAATGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droFic1 scf7180000454117:81987-82274 - ACTA---TCGCCGGAAACAGCAGCAACT---ACACCTGCACAAGCAGCGTTTTTTTGTCAGATGCTGAGGC-ACC----TT-----------CA--GA---AC-CAGAAAAGG---TCC--------------------------------------------------------------------------------------------------------TCCTCTGA--A--------------TTT------------CG-A-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------T-----CGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTTTTTTTTCT----TTACGTT--GCGCAGCGCAAA-G-TAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTG
droKik1 scf7180000302412:564938-565257 - ATTATAATCGCCGGAAGCAGCAACAATTGCAACACTTGCATAATCAACGTTTTTTTGTCAGATGTTAAGAG-GTCC---TTCTTCTTCCACGCG--AA--------GAATAGG---CTC--------------------------------------------------------------------------------------------------------TCCTTTGG---------------------------------G-T-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCACG-C--------C---------------------------TA--AAT------------A----TCGACT---------------CTTTTTTTCTTTTGTTCCTTTGATGGC-AAATTCT---TTGACCAA-ATGTTGTATTT------CT----TTACGTT--GCGCAGCGTATA-ATTAATGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----GGTAGGAT-TTTCTA-TTTAGTTTTGCAAAAAGACTCACA--ATTATATAGTATTTG
droAna3 scaffold_12916:10086540-10086837 - ACTA---TCGCCAGAAACAGCAGCAGTT---GCACCTGCGCAAGCAGCGCTTTTTTGTTAGGTGTTAGA-T-GCC----TA-----------TA--GA---GA---TGAAGGA---TCT-------CTC------------------T----C--TC--C----------------------------------------------------------AATCCTG--------------------------------------TA-C-----TTT-GT-TTTGGAAACAATTTTT-GG-TTTCAC-----------T---------------------------TTCGTATTTGGGGATTCATTATT--------------T-------CTGTTTT---TTT----GTTG-------AAATTCTATGTTGACCAGGA-----TGTT--------G----TCAGGAT--GC----CATGTT-GTTGGCGCTTTAATTTATTGAA-TACATT-TAGTTTCTCTT-----AGTAGGAT-TCTCTA-TTTAGT--TGCAA-AAGACGCACACGATTA----CTATTTT
droBip1 scf7180000396580:949065-949382 + ACTA---TCGCCAGAAACAGCAGCAGTT---GCATCTGCGCAAACAGCGCTTTTTTGTCAGGTGTTAGATATGCC----TC-----------CA--GA----G-CAG--A--G---TCCTCCAGCAGGC------------------TC-C------GGC-----------------------------------------------------------TCC-------G---G--------------C-----TCCGATATGTA-C-----TTT-GT-TTTGGAAACAAT-TTT-GG-TTTCAC-----------T---------------------------TG--TATT--GGGATTCATAATT--------------TTTTCGTTT---------TTT----TTTGTTTGTT-GAATTCTATGTTGACCA--------TGTTT------CA----TGATGTGGCGCGCAACGTAAACGTTGGCGCTTTAATTTATTGAA-TACATT-TAGTTT-TCTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACG--ATTA----CTATTTT
dp5 4_group1:4079909-4080224 + AGTA---CCGCCGGAAGCAGCAACAACT---ACACTTGCACAAGCAACGGTTTTTTGTCAGATGTTGAGCC-AGC----CC-----------CG--AA---AG-CGG--GGG-----------------------CTGCCAACTTTATG-C------GGCGTTTTTGTATTATTATTTTTG---------------------------------------CC------------------------------AGTTGGGC---AA-ATTTTTGTT-GA-TTTGGAAACGAC-TTT-GG-TTTCAC-----------A----------------------------A--TAC------------T-----CGAAT---------------A---------TTT----TGTAGATGGTAGGACTCT---ATGACCA--------TA--T------CT----TTACGTT--GCGCAACGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTAT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAC-ATTA----GTAATTC
droPer2 scaffold_5:1184541-1184852 - AGTA---CCGCCGGAAGCAGCAACAACT---ACACTTGCACAAGCAACGGTTTTTTGTCAGATGTTGAGCC-AGC----CC-----------CG--AA---AG-CGG--GGG-----------------------CTGCCAACTTTATG-C------GGCGTTTTTGTATTATTATTTTTG---------------------------------------CC------------------------------AGTTGGGC---AA-ATTTTTGTT-GA-TTTGGAAACGAC-TTT-GG-TTTCAC-----------A----------------------------A--TAC------------T-----CGAAT---------------A---------TTT----TGTAGATGGTAGGACTCT---ATGACCA--------TA--T------CT----TTACGTT--GCGCAACGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTAT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAC-ATTA----GTA----
droWil2 scf2_1100000004945:322607-322913 - AACA---CCGTAGGAAGCAGCAGCAATT---ACATTTGCATAAGCATCGTTTTTTTGTCAGCTGTTGATC--AGC----TT---------------AA---AT-CATCA-----------------ATT------------------T----T--TG--A----------------------------------------------------------GATCATCTCCTTG-------------------------------------------A-GA-TTTGGAAACAATTTTTTGG-TTTCACC----------T---------------------------TA--AAT------------T-----AGAATCTAGATCCTATATAGT---------AGT----TTAGTTAG-T-TACGTCT---ATACATAT-A-----TATTT----TTCTTGATTTACGTT--GCGCAACGGAAAATTTAATTCTTTAATTTATTGAA-TACATTTTAGTAT-ACTT-----TATAGGAT-TTTGTAGTTTAGTTTTGCAA-AAGACGCACA--ATTATT--CACTTTA
droVir3 scaffold_12723:3028425-3028737 - CGCA---GCGGCGCAAGCAACAACAGTT---GCATTTGCACAAGCAGCGCTTTTTTGTTAGCTGTTAAAAACAAA----TA-----------TC--GG---GATCGG--A--G---TTTGGAATCGGAATCGGGGTTGCCAGATTG-CTTTTCCCCT--CAATCTTTCATTTTTCATTTTG------GCTGAGATAACCAA--------TTAACGTTA--TT-TTCTTTGC--TTTTCTATTTTCTTTTT------------------TTTTTTT-GA-TTTGGAAACGTATTTT-TG-TTTCATG-----ATTTGTTATAA-ATGCCAA-----TTGAAGCAT---------------------------------------------T---------TTT----GTA--------AGAT---------------------TCTTT------CT----TAACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATA-TA-----------------------------------------------------------------------
droMoj3 scaffold_6500:6839656-6839993 + CGCA---ACGACGAAAGCAACAACAGTT---GCACTTGCACAAGCAGCGCTTTTTCGTCAGCTGTTAAAAAGAGC----TG-----------TT--AA---GA-CAGAAACGG---CCG--------------GGCTGCCAACTTG-TT-T------ATCGCTCTTTCAATTTTGTTTTTGTGGTTCGCTAAGGGAACCAA------------------------------------------------C---ATTTGACG--CG-A-----TTTAAATTATGGAAACGGATTTT-TG-TTTCACCAC----TTTGCTATAA-ATGCCAC-----TTGAAGCAT----------------------T----TTT-------C-----CTT---------TAT----CTTCTATGAT-TCATT---------------------CTTT------CT----TTACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATTATAATTG-TTTT-----CGTAAATTCTTTGTA-TTTAGT--TGCAA-AAAAGA-GCG--CT-------------
droGri2 scaffold_15126:454209-454554 + CGCA---GCGACGCAAACAGCAACAGCT---GCATTTGCACAAGCAGCGCTTTTTTGTCAGTTGTTGAAAA-AAT----CA-----------CA--AT--------G--GGG-----------------------CTGCCAACTTGATT-TTGTTTTGTTG--CTTTCAATTTTGTTT-------------AGGAGACGAACCTAATAACTAACGTTT-----TTTTTTG-----------------------ATTTGATC--TG-A-----TTT-GA-TTTGGAAACGCCATTT-TGTTTCAACG-CCAAATTTGTTATAAAATGCCAGCCAAGTTG-GGCAT---------------------------------------------T---------TG--------------------TCT---ATGATAA--------T--TTCTTTCTCT----TTACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATA-TAATTC-TTTTTTTTCTGTAAATTCATTGTA-TTTAGTTTTGCAA-AATAAGAGCG--CT-------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCACATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT-ACTT-----AGTAGGAT-TTTCT...........................................2114.00400000002200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-T...............................................2114.00400000002011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ACTT-----AGTAGGAT-TTTCTA-T........................................2112.00200000002000000000
....................................................................................................................................................................................................................................................................................................................................................................................CT-------C-----CTC---------TTT----GTTGGATGGC-.......................................................................................................................................................................1912.00200110000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2611.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TT----GTTGGATGGC-AAATTCT-TG.............................................................................................................................................................2111.00100000000001000000
...........................................................ACATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-T................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGT--TGCAA-AAGACGCACA--GT.............2111.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAT-TTTCTA-TTTAGT--TGC..............................2111.00100000000001000000
....................................................TTTTGTCACATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-TT...............................................................................................................................................................................................................................................................................................................2911.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-TAGTGT-ACTT-----AGTAGGA..................................................2111.00100000010000000000
.......................................................................................................................................................................................................................................................................AG-A-----TTT-GA-TTTGGAAACAA--TT..................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATT-TAGTGT-ACTT-----AGTAGG...................................................2111.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-T........................................2711.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GT.............3011.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGT-ACTT-----AGTAGGAT-TTT.............................................2111.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................A--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTG..............................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAT-TTTCTA-TTTAGT--TGCA.............................2211.00100000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----AGTAGGAT-TTTCTA-TT.......................................1811.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--.................................2511.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA-TTTAGT--TGCAA-AAGACGCACA--G..............2511.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTA-TTTAGT--TGCAA-AAGACGCACA--GT.............2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-TGTTGACCA--------TATTT------CT----TTACGT.......................................................................................................................2611.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTA-TTTAGT--TGCAA-AAGACG.....................2111.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGCAA-AAGACGCACA--GTTA----GTATT..2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTTAGT--TGCAA-AAGACGCACA--G..............2411.00100000100000000000
.....................................................TTTGTCACATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-T................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTT--GCGCAGCGTAAA-A......................................................................................................1911.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TC---------TTT----GTTGGATGGC-AAATTCT-TGT............................................................................................................................................................2511.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGT--TGCAA-AAGACGCACA--GT.............2011.00100000000001000000
droSec2
ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTAATTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTTATTGAA-TACATT-T........................................................................2111.0011000
..........................................................................................................................................................................................................................................................................A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTT..........................................................................................................................................................................................................................................................................................2511.0010100
............................................................GATGCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AG-A-----TTT-GA-T................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-T...............................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCA--------TATTT------CT----TTACGTT--....................................................................................................................2111.0010010
dm3
ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCATAAGCAGCGCTTTTTTGTCAGATGCTGAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AGAA-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT-------C-----CTC---------TTT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAA-GTTA----GTATTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-T...............................................21148.00480000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010400200000000000000000000000000000000000000000000000283000011000100100000000000000000000000000000000001000000000200020000200000000001100100110010003010100000000010102000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTTAGT--TGCAA-AAGACGCA...................21130.00300000100000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000121010000000000011000000000000000000000000000000000000000000000310200200000000000000000000000000000010010000000120110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATT-TAGTGT-ACTT-----AGTAGG...................................................21124.00240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024000000000000000000000000000020000000000000035000000010000000000000000000000000000000000000000000000000000000100000010000101000000000000000111000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAT-TTTCTA-TTTAGT--TGC..............................21124.00240000000000000000000000000000000000001000000000000000000000000000000000000000000000000011000000000000000001100000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000001000001000000000000010000010000010000000000000000000000000100000000000000000000050000000000000000000100031010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................26122.002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012004000000000000000000020000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA-TTTAGT--TGCAA-AAGACGC....................21118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000001038200000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GCGCAGCGTAAA-ATTAACG................................................................................................21114.00140000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000052000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTGAA-TACATT-TAGTGT-..................................................................21114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000000000000000000000000000000000000000000000000020001002000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000012000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT------CT----TTACGTT--GCGCAGCGT...........................................................................................................21113.001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGT--TGCAA-AAGACGCACA.................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGT-ACTT-----AGTAGGAT-TTTCT...........................................21111.00110000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000131000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGTGT-ACTT-----AGTAGGAT-TT..............................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100220000000000000000000000000000000001000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-TAGTGT-ACTT-----AGTAGGAT-................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000010000000000000000000000000000000000000000000000000000020000000000000000000000000000000000020011000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTA-TTTAGT--TGCAA-AAGACG.....................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000010000000000000000000000000000000000000000000100100010000000000000100000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000610000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGT-ACTT-----AGTAGGAT-TTT.............................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110010000000000000011000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGT--TGCAA-AAGACGCACAA-GT.............2116.0060000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000101000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGT-ACTT-----AGTAGGAT-TTTC............................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000110000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAGACGCACAA-GTTA----GTAT...2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000130000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGT-ACTT-----AGTAGGAT-TTTCT...........................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-TTTCTA-TTTAGT--TGCAA-A..........................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ACTT-----AGTAGGAT-TTTCTA-T........................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-ACTT-----AGTAGGAT-TTTCTA-TT.......................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AAGACGCACAA-GTTA----GTATT..2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGT-ACTT-----AGTAGGAT-TTTC............................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-AAGACGCACAA-GTTA----GTA....2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................CT-------C-----CTC---------TTT----GTTGGATGGC-AAATT..................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAA-TACATT-TAGTGT-AC................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-ACTT-----AGTAGGAT-TTTCTA-.........................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTGT-ACTT-----AGTAGGAT-................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTATTGAA-TACATT-TA.......................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TTTAGT--TGCAA-AAGACGCAC..................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT-TAGTGT-ACTT-----AGTAGGA..................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000001000000000000000000000
.........................................................................................................................................................................................................................................................TT------------AGAA-----TTT-GA-TTTGGAAACAA--TTT-GG-.............................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAA-TACATT-TAGTGT-ACTT-----.........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGAT-TTTCTA-TTTAGT--TG...............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------TATTT------CT----TTACGTT--GCGCA...............................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................GCAGCGCTTTTTTGTCAGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA-AAGACGCACAA-GTTA----GTATT..2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTA-TTTAGT--TGCAA-AAGA.......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCTTTAATTTATTGAA-T...............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT-TGTTGACCA--------TATTT------CT----TTACGT.......................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTTATTGAA-TACATT-T........................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--TGCAA-AAGACGCACAA-GTT............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT--GCGCAGCGTAAA-ATTAAC.................................................................................................2112.0020000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT----TTACGTT--GCGCAGCGTAAA-.......................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCA--------TATTT------CT----TTACGTT--GCGCAGC.............................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGTGT-ACTT-----AGTAGGAT-TTAAA...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................TCAGATGCTGAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT------------AGAA-----TTT-GA-.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTA-TTTAGT--TGCAA-AAGACGCACAA-GT.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-ACTT-----AGTAGGAT-TTTCTA-.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTT--GCGCAGCGTAAA-A......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTT--GCGCAGCGTAAA-ATTAACGCTT.............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATT-TAGTGT-ACTT-----AGTAG....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAGACGCACAA-GTTA----GTATT..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droEre2
ATTA---TCGCCGAAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGGG-ACC----TT-----------CG--AA---GA---GGAGAGG---TGC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTT------------AG-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----AGCCT---------------C---------TTT----GTTGATTGGC-AAATTCT-TGTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATT-TAGTGT-ACTT-----AGTAGG...................................................2111.0010000100
.........................................................................................................................................................................................................................................................................................................................................................A--TAT------------A-----AGCCT---------------C---------TTT----GTTGA.............................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................G-A-----TTT-GA-TTTGGAAACAA--TTT-GG-T............................................................................................................................................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA-TACATT-TAGTGT-ACTT-----A........................................................2111.0010000010
............................................................................................................................................................................................................................................................................................................................................................TAT------------A-----AGCCT---------------C---------TTT----GTTGATTG..........................................................................................................................................................................2111.0011000000
droYak3
ATTA---TCGCCGGAAACAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTAAGATGCTGAGAG-ACC----TT-----------TG--AT---GG---GGAGAGA---TCC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTCAAATTGGATA--TA-A-----TTT-GA-TTTGGAAACAA--TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----TGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TGTTGACCA--------TATTT--CTTTCT----TTACGTT--GCGCAGCGTAAA-ATTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--GTTA----GTATTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAA-TACATT-TAGTGT-ACT...............................................................2111.00101000000000
.......TCGCCGGAAACAGCAGCAACT---ACACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTTATTGAA-TACATT-T........................................................................2011.00101000000000
....................CAGCAACT---ACACCTGCACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT-ACTT-----AGTAGGAT-TTTCTA-.........................................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATT-TAGTGT-ACTT-----AGTAGG...................................................2211.00100000100000
droEug1
ATTA---CCGGCGGAAGCAGCAACAACT---ACACCTGCAAAAGCAGCGCTTTTTTGTCAGATGTTAAAGG-ACC----TC-----------CGAGAAAAAAA---GGAGATG---TCC-------------------------------TTC----------------------------------------------------------------------TCCT-TAA--A--------------CTT------------CG-A-----TTT-GA-TTTGGAAACACT-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------T-----CGCCT---------------G---------ATT----TTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT----TTCT----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droBia1
ACTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTCGTCACTTGTTGAGGG-AGCATCCTC-----------CG------------GGAGAGG---TCC--------------------------------------------------------------------------------------------------------TCCACTCG--G--------------TTC------------AG-A-----TTT-GA-TTTGGAAACAAC-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------G-----GGACT---------------CTCCTTT---TTT----GTTGGTTGGC-AATT----GGTCGACCA----------TTT------CA----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATTTTAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTA---TCGCCGGAAGCAGCAACAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGAG-ACCGACCTT-----------CG--AAAAATA---GGAGAGGTGGTCC--------------------------------------------------------------------------------------------------------TCCTCTGG--A--------------TTT------------TG-A-----TTT-GA-TTTGGAAACAAC-TTT-GG-TTTCGC-----------C---------------------------TA--CAT------------A-----CGACT-------TTTT----CTTTTTT---TTT----GTTGAATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droEle1
ATTA---TCGCCGGAAGCAGCAGCAACT---ACACCTGCACAAGCAGCGCTTTTTTGTCAGATGCTGAGTG-GCC----TC-------CAC-CG--AA---CT---GGAGAGG---TCC--------------------------------------------------------------------------------------------------------TCCTCTGGCCA--------------TT---ATTCGATT--TG-A-----TTC-GA-TTTGGAAACAAT-TTT-GG-TTTCGC-----------C---------------------------TA--TA-------ATCTATAATGTTCGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGTAAAAGTTAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droRho1
ATTA---TCGCCGGAAGCAGCAGCAACT---TCACCTGCATAAGCAGCGCTTTTTTGTTAGATGCTGAGAG-ACC----TC-----------CG--AA---TA---GGAGAGA---TCC--------------------------------------------------------------------------------------------------------TCCTTTGG--A--------------TTT------------TG-T-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCAC-----------C---------------------------TA--TAT------------A-----CGCCT---------------C---------TTT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTT------CT----TTACGTT--GCGCAGCGCAAA-GTTAATGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droFic1
ACTA---TCGCCGGAAACAGCAGCAACT---ACACCTGCACAAGCAGCGTTTTTTTGTCAGATGCTGAGGC-ACC----TT-----------CA--GA---AC-CAGAAAAGG---TCC--------------------------------------------------------------------------------------------------------TCCTCTGA--A--------------TTT------------CG-A-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCGC-----------C---------------------------TA--TAT------------T-----CGCCT---------------C---------ATT----GTTGGATGGC-AAATTCT-TTTTGACCA--------TATTTTTTTTTCT----TTACGTT--GCGCAGCGCAAA-G-TAACGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACA--ATTA----GTATTTGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTATAATCGCCGGAAGCAGCAACAATTGCAACACTTGCATAATCAACGTTTTTTTGTCAGATGTTAAGAG-GTCC---TTCTTCTTCCACGCG--AA--------GAATAGG---CTC--------------------------------------------------------------------------------------------------------TCCTTTGG---------------------------------G-T-----TTT-GA-TTTGGAAACAAT-TTT-GG-TTTCACG-C--------C---------------------------TA--AAT------------A----TCGACT---------------CTTTTTTTCTTTTGTTCCTTTGATGGC-AAATTCT---TTGACCAA-ATGTTGTATTT------CT----TTACGTT--GCGCAGCGTATA-ATTAATGCTTTAATTTATTGAA-TACATT-TAGTGT-ACTT-----GGTAGGAT-TTTCTA-TTTAGTTTTGCAAAAAGACTCACA--ATTATATAGTATTTGSizeHit CountTotal NormTotal
No Reads
droAna3
ACTA---TCGCCAGAAACAGCAGCAGTT---GCACCTGCGCAAGCAGCGCTTTTTTGTTAGGTGTTAGA-T-GCC----TA-----------TA--GA---GA---TGAAGGA---TCT-------CTC------------------T----C--TC--C----------------------------------------------------------AATCCTG--------------------------------------TA-C-----TTT-GT-TTTGGAAACAATTTTT-GG-TTTCAC-----------T---------------------------TTCGTATTTGGGGATTCATTATT--------------T-------CTGTTTT---TTT----GTTG-------AAATTCTATGTTGACCAGGA-----TGTT--------G----TCAGGAT--GC----CATGTT-GTTGGCGCTTTAATTTATTGAA-TACATT-TAGTTTCTCTT-----AGTAGGAT-TCTCTA-TTTAGT--TGCAA-AAGACGCACACGATTA----CTATTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTGACCAGGA-----TGTT--------G----TC...........................................................................................................................2012.002000002
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGTTGACCAGGA-----TGTT--------G----TT...........................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTATGTTGACCAGGA-----TGTT--------G----TC...........................................................................................................................2411.001100000
................................................................................................................................................................................................................................G--------------------------------------TA-C-----TTT-GT-TTTGGAAACA.......................................................................................................................................................................................................................................................................................................1911.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGA-----TGTT--------G----TCAGGAT--GC----CA............................................................................................................1920.501000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--------G----TCAGGAT--GC----CATGTT-GTC....................................................................................................2120.501010000
........................................................................................................................................................................................................................................................................................................................................................TTCGTATTTGGGGATTCATTA...........................................................................................................................................................................................................................2120.501000010
droBip1
ACTA---TCGCCAGAAACAGCAGCAGTT---GCATCTGCGCAAACAGCGCTTTTTTGTCAGGTGTTAGATATGCC----TC-----------CA--GA----G-CAG--A--G---TCCTCCAGCAGGC------------------TC-C------GGC-----------------------------------------------------------TCC-------G---G--------------C-----TCCGATATGTA-C-----TTT-GT-TTTGGAAACAAT-TTT-GG-TTTCAC-----------T---------------------------TG--TATT--GGGATTCATAATT--------------TTTTCGTTT---------TTT----TTTGTTTGTT-GAATTCTATGTTGACCA--------TGTTT------CA----TGATGTGGCGCGCAACGTAAACGTTGGCGCTTTAATTTATTGAA-TACATT-TAGTTT-TCTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACG--ATTA----CTATTTTSizeHit CountTotal NormTotal
No Reads
dp5
AGTA---CCGCCGGAAGCAGCAACAACT---ACACTTGCACAAGCAACGGTTTTTTGTCAGATGTTGAGCC-AGC----CC-----------CG--AA---AG-CGG--GGG-----------------------CTGCCAACTTTATG-C------GGCGTTTTTGTATTATTATTTTTG---------------------------------------CC------------------------------AGTTGGGC---AA-ATTTTTGTT-GA-TTTGGAAACGAC-TTT-GG-TTTCAC-----------A----------------------------A--TAC------------T-----CGAAT---------------A---------TTT----TGTAGATGGTAGGACTCT---ATGACCA--------TA--T------CT----TTACGTT--GCGCAACGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTAT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAC-ATTA----GTAATTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TAGTAT-ACTT-----AGTAGGAT-TT..............................................2114.0040000000400
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCA--------TA--T------CT----TTACGTT--GC..................................................................................................................2112.0020200000000
...................................................................................................................................................................................................................................................................................................................................................................................AAT---------------A---------TTT----TGTAGATGGTAGGACT..................................................................................................................................................................2311.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TAGTAT-ACTT-----AGTAGGAT-T...............................................2111.0010000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--T------CT----TTACGTT--GCGCAACGC...........................................................................................................2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................TT----TGTAGATGGTAGGACT..................................................................................................................................................................1811.0011000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-ACTT-----AGTAGGAT-TTTCTA-T........................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TTTAGT--TGCAA-AAGACGCA...................2111.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTA-TTTAGT--TGCAA-AAGACGC....................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-ACTT-----AGTAGGAT-TTTCTA-.........................................2111.0010000000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................CT---ATGACCA--------TA--T------CT----TTACGTT--....................................................................................................................2111.0010000001000
.......................................................................................................................................................................................................................................................................................TTTGGAAACGAC-TTT-GG-TTTC.........................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT-ACTT-----AGTAGGAT-TTTCT...........................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-TAGTAT-ACTT-----AGTAGG...................................................1911.0010000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................A---------TTT----TGTAGATGGTAGGACTC.................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAT-TTTCTA-TTTAGT--TGCA.............................2111.0010100000000
droPer2
AGTA---CCGCCGGAAGCAGCAACAACT---ACACTTGCACAAGCAACGGTTTTTTGTCAGATGTTGAGCC-AGC----CC-----------CG--AA---AG-CGG--GGG-----------------------CTGCCAACTTTATG-C------GGCGTTTTTGTATTATTATTTTTG---------------------------------------CC------------------------------AGTTGGGC---AA-ATTTTTGTT-GA-TTTGGAAACGAC-TTT-GG-TTTCAC-----------A----------------------------A--TAC------------T-----CGAAT---------------A---------TTT----TGTAGATGGTAGGACTCT---ATGACCA--------TA--T------CT----TTACGTT--GCGCAACGCAAA-GTTAACGCTTTAATTTATTGAA-TACATT-TAGTAT-ACTT-----AGTAGGAT-TTTCTA-TTTAGT--TGCAA-AAGACGCACAC-ATTA----GTA----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ACTT-----AGTAGGAT-TTTCT...........................................1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................A--T------CT----TTACGTT--GCGCAACGC...........................................................................................................2011.001000100
..............................................................................................................................................................................................................................................................................TTGTT-GA-TTTGGAAACGAC-TTT-GG-T............................................................................................................................................................................................................................................................................................2511.001000001
droWil2
AACA---CCGTAGGAAGCAGCAGCAATT---ACATTTGCATAAGCATCGTTTTTTTGTCAGCTGTTGATC--AGC----TT---------------AA---AT-CATCA-----------------ATT------------------T----T--TG--A----------------------------------------------------------GATCATCTCCTTG-------------------------------------------A-GA-TTTGGAAACAATTTTTTGG-TTTCACC----------T---------------------------TA--AAT------------T-----AGAATCTAGATCCTATATAGT---------AGT----TTAGTTAG-T-TACGTCT---ATACATAT-A-----TATTT----TTCTTGATTTACGTT--GCGCAACGGAAAATTTAATTCTTTAATTTATTGAA-TACATTTTAGTAT-ACTT-----TATAGGAT-TTTGTAGTTTAGTTTTGCAA-AAGACGCACA--ATTATT--CACTTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................ATCGTTTTTTTGTCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.......................................ATAAGCATCGTTTTTTTGTCAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
................................................................................................................................T------------------T----T--TG--A----------------------------------------------------------GATCATCTCCTTG-------------------------------------------A-GA-TTTGGA...........................................................................................................................................................................................................................................................................................................2811.00110000
droVir3
CGCA---GCGGCGCAAGCAACAACAGTT---GCATTTGCACAAGCAGCGCTTTTTTGTTAGCTGTTAAAAACAAA----TA-----------TC--GG---GATCGG--A--G---TTTGGAATCGGAATCGGGGTTGCCAGATTG-CTTTTCCCCT--CAATCTTTCATTTTTCATTTTG------GCTGAGATAACCAA--------TTAACGTTA--TT-TTCTTTGC--TTTTCTATTTTCTTTTT------------------TTTTTTT-GA-TTTGGAAACGTATTTT-TG-TTTCATG-----ATTTGTTATAA-ATGCCAA-----TTGAAGCAT---------------------------------------------T---------TTT----GTA--------AGAT---------------------TCTTT------CT----TAACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATA-TA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................TTTT-GA-TTTGGAAACGTATTTT-TG-TTT..........................................................................................................................................................................................................................................................................................2712.002001000000000100000000000000000000000000000000000000000000000000
...A---GCGGCGCAAGCAACAACAGTT---GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000002000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTT----GTA--------AGAT---------------------TCTTT------CT----TAACGTT--GC..................................................................................................................2612.002000000000000000000002000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TT----GTA--------AGAT---------------------TCTTT------CT----TAACGTT--GCGC................................................................................................................2712.002000001000000000000001000000000000000000000000000000000000000000
....................................................TTTTGTTAGCTGTTAAAAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
...................................................TTTTTGTTAGCTGTTAAAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................TTAAAAACAAA----TA-----------TC--GG---GATCGG--A--G---TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTTT-GA-TTTGGAAACGTATTTT-TG-TT...........................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCCAA-----TTGAAGCAT---------------------------------------------T---------TTT----GTA--------AGAT---------------------..............................................................................................................................................2611.001000000000000000000000000000000001000000000000000000000000000000
...................................TTGCACAAGCAGCGCTTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
....................CAACAGTT---GCATTTGCACAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................TTTGGAATCGGAATCGGGGTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------TCTTT------CT----TAACGTT--GCGCA------------ACGCTT.............................................................................................2611.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................TTTTG------GCTGAGATAACCAA--------TTAACGTT...............................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TA--------AGAT---------------------TCTTT------CT----TAACGTT--GCGCA------------A..................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................TC--GG---GATCGG--A--G---TTTGGAATCGGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TAACCAA--------TTAACGTTA--TT-TTCT.....................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TTTTTCATTTTG------GCTGAGA......................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................TGGAATCGGAATCGGGGTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T---------TTT----GTA--------AGAT---------------------TCTTT------CT----TAACGTT--GC..................................................................................................................2711.001000001000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TGAAGCAT---------------------------------------------T---------TTT----GTA--------AGAT---------------------TCTTT------C..................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
......................................CACAAGCAGCGCTTTTTTGTTAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TT------CT----TAACGTT--GCGCA------------ACGC...............................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ATCGGAATCGGGGTTGCCAGATTG-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................AACAAA----TA-----------TC--GG---GATCGG--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000001000000000000000000000000
.GCA---GCGGCGCAAGCAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TA--------AGAT---------------------TCTTT------CT----TAACGTT--GCGCA------------...................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----TAACGTT--GCGCA------------ACGCTTTAATTTAT.....................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTT------CT----TAACGTT--GCGCA------------ACGCTT.............................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
..........................................AGCAGCGCTTTTTTGTTAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................TCGGGGTTGCCAGATTG-CTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTGTTATAA-ATGCCAA-----TTG......................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
CGCA---ACGACGAAAGCAACAACAGTT---GCACTTGCACAAGCAGCGCTTTTTCGTCAGCTGTTAAAAAGAGC----TG-----------TT--AA---GA-CAGAAACGG---CCG--------------GGCTGCCAACTTG-TT-T------ATCGCTCTTTCAATTTTGTTTTTGTGGTTCGCTAAGGGAACCAA------------------------------------------------C---ATTTGACG--CG-A-----TTTAAATTATGGAAACGGATTTT-TG-TTTCACCAC----TTTGCTATAA-ATGCCAC-----TTGAAGCAT----------------------T----TTT-------C-----CTT---------TAT----CTTCTATGAT-TCATT---------------------CTTT------CT----TTACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATTATAATTG-TTTT-----CGTAAATTCTTTGTA-TTTAGT--TGCAA-AAAAGA-GCG--CT-------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................TAAGGGAACCAA------------------------------------------------C---ATTTGACG--.................................................................................................................................................................................................................................................................................................................................2112.002200000
...............................................................................................................GG---CCG--------------GGCTGCCAACTTG-T....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
......................................................................................................................................GCTGCCAACTTG-TT-T------ATCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................................ATTTT-TG-TTTCACCAC----TTTGC...........................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................T-TCATT---------------------CTTT------CT----TTACGTT--GC..................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAATTG-TTTT-----CGTAAATT.................................................2111.001100000
..............................................................................................................................................................................GTTTTTGTGGTTCGCTAAGGGAA...................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.......................................................................................................................................................................................................................................................................CG-A-----TTTAAATTATGGAAACGG......................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................T-T------ATCGCTCTTTCAATTTTGT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................AAGGGAACCAA------------------------------------------------C---ATTTGACG--CG-..............................................................................................................................................................................................................................................................................................................................2211.001100000
.............................................................................................................................................................................................................................................................................................................TCACCAC----TTTGCTATAA-ATGCCAC-----TT.......................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................TCGCTAAGGGAACCAA------------------------------------------------C---ATTTGACG--C................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................TT-TG-TTTCACCAC----TTTGCTATA.......................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................TTCGCTAAGGGAACCAA------------------------------------------------C---ATT........................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................TTTCAATTTTGTTTTTGTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................TTCAATTTTGTTTTTGTGGTTC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................GCAGCGCTTTTTCGTCAGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................GCCAACTTG-TT-T------ATCGCTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................AAATTATGGAAACGGATTTT-TG-T............................................................................................................................................................................................................................................................................................2311.001000001
................................................................................................................................................................................................................................................................TGACG--CG-A-----TTTAAATTATGGAAA.........................................................................................................................................................................................................................................................................................................2311.001000001
...............................GCACTTGCACAAGCAGCGCTTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................GTTTTTGTGGTTCGCTAAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................AAACGG---CCG--------------GGCTGCCAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................GCTGCCAACTTG-TT-T------ATCGCTCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................AA---GA-CAGAAACGG---CCG--------------GGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droGri2
CGCA---GCGACGCAAACAGCAACAGCT---GCATTTGCACAAGCAGCGCTTTTTTGTCAGTTGTTGAAAA-AAT----CA-----------CA--AT--------G--GGG-----------------------CTGCCAACTTGATT-TTGTTTTGTTG--CTTTCAATTTTGTTT-------------AGGAGACGAACCTAATAACTAACGTTT-----TTTTTTG-----------------------ATTTGATC--TG-A-----TTT-GA-TTTGGAAACGCCATTT-TGTTTCAACG-CCAAATTTGTTATAAAATGCCAGCCAAGTTG-GGCAT---------------------------------------------T---------TG--------------------TCT---ATGATAA--------T--TTCTTTCTCT----TTACGTT--GCGCA------------ACGCTTTAATTTATTTAATTACATA-TAATTC-TTTTTTTTCTGTAAATTCATTGTA-TTTAGTTTTGCAA-AATAAGAGCG--CT-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:33 PM