ID:

dsi_13647

 Coordinate:

2r:10747483-10747744 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.9 -12.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATGCCCAAGTGATTGTCTAACTCAGTGCAGATCTTCGAGACCAGCGAAAGGTACTCCAACTTCTGCAGCTCGTCCATGCCGTCAAAGAGTACTAATTCAGATACAATTTACAAAATTTGTGGAAATTTTAGAAAATTTCCCGCTGCAACAAAACGCGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACTGAACGTGGTGGCAGCACTAGCCACAATCACTCGGTTTCGGACGCTACGCTTAATTTCGTCGCGTTTTTGTTGTTAAAACTAAAAATAATCTCTATTTTAATCAAAGATACATCTGAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCA
******************************************************************************************************************************************************************************************************....((((((..((((((((.......)))))...)))))))))........**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................................................................................................................................TCACTCGGTTTCGGACGC................................................................................................................ 18 0 1 6.00 6 0 4 0 1 1 0 0 0 0 0
.........TGATTGTCTAACTCAGTGCAG............................................................................................................................................................................................................................................................................................................................................ 21 0 1 3.00 3 2 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................CAAAGATACATCTGAATATGTC................................. 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
.......................................................................GTCCATGCCGTAAAAGA.................................................................................................................................................................................................................................................................................. 17 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................GCTTGATTTCGTCGCGTTTT......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATCACTCGGTTTCGGACGC................................................................................................................ 19 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................GGTTTCGGACGCTGCGCTTAA....................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AAACAACTGAACGTGGTGGCA............................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTTCGGACGCTACGCTTAATTT.................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................CACTCGGTTTCGGACGCTAC............................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................TGTGGAAATTTTAGAA..................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................AGCCACAATCACTCGGTTTCGGAC.................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................CGCTTAATTTCGTCGCGTTTT......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................AATCACTCGGTTTCGGAC.................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................GCAGATCTTCGAGACCAGCGTT.......................................................................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CGGTTTCGGACGCTACGCTTGG....................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............TCTAACTCAGTGCAGATCTTC...................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CGGTTTCGGACGCTACGCTTAT....................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................TTCGGACGCTACGCTTAATTT.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................CAACAAAACGCGATCAGCTGTT................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................TGCAGATCTTCGAGACCAGCG............................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................TCGCGTTTTTGTTGTTAAAACT............................................................................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................CGGTTTCGGACGCTACGCTTGT....................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................................................TTAATTTCGTCGCGTTTTTGT...................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGTTGAGATTTTAGAAAATTT................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................................TTCGAGACCAGCGAAAGGTGCT................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................GCAGATCTTCGAGACCAGCGTTT......................................................................................................................................................................................................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAACTGAACGTGGAG.................................................................................................................................................. 15 1 20 0.40 8 0 0 0 0 0 7 1 0 0 0
..............................................................................................................................................................................................................................................................CTTGGTTTCGTCGCGTTTTTG....................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................CTAGCGATTTTGTTGTTAAAA.............................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
.......................................................................GTCCATGCCGTAAACGA.................................................................................................................................................................................................................................................................................. 17 2 12 0.25 3 0 0 2 0 0 0 1 0 0 0
..................................................................................................................................................................................................GTTAAAGCGACTGAACGTGG.................................................................................................................................................... 20 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................................................................................................................................................................TGGTCGCGTTTTTGTT..................................................................................... 16 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
..................................................................................................................ATTTGTGGAAAGTTTA........................................................................................................................................................................................................................................ 16 1 16 0.06 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................ATCTCTATTTTGCTCAAA................................................... 18 2 16 0.06 1 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................CTGAACGAGGTCGCAG.............................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................................ATAGGTTTCGGACGCGAC............................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
..........GCTCGTCTAACTCAGT................................................................................................................................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0
..........GATCGGCTAACTCCGTGC.............................................................................................................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0
........................................................................TCCATGCCGTAAACGA.................................................................................................................................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TACGGGTTCACTAACAGATTGAGTCACGTCTAGAAGCTCTGGTCGCTTTCCATGAGGTTGAAGACGTCGAGCAGGTACGGCAGTTTCTCATGATTAAGTCTATGTTAAATGTTTTAAACACCTTTAAAATCTTTTAAAGGGCGACGTTGTTTTGCGCTAGTCGACAAAGACGTGCGTTACCACAACGGTCCGCGCATTTTTGTTGACTTGCACCACCGTCGTGATCGGTGTTAGTGAGCCAAAGCCTGCGATGCGAATTAAAGCAGCGCAAAAACAACAATTTTGATTTTTATTAGAGATAAAATTAGTTTCTATGTAGACTTATACAGAAGCAAGAAGCTAACGAAGTTACTAAAAGACGT
****************************************************************************************************************....((((((..((((((((.......)))))...)))))))))........****************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553488
RT_0-2 hours eggs
 O001
Testis
 SRR902008
ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M024
male body		 M053
female body
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
...........................................................................................................................................................GCTAGTCGACAAAGACGTGCGT......................................................................................................................................................................................... 22 0 1 6.00 6 0 2 0 1 0 0 0 2 0 1 0 0 0 0
.................................................................GTCGAGCAGGTACGGCAGTTT.................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGCGCTAGTCGACAAAGACGT............................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...................TGAGTCACGTCTAGAAGCTCT.................................................................................................................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................CAGTTTCTCATGATTAAGTCTA.................................................................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................GACGTCGAGCAGGTACGGCAG....................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................AGAGCAAAAACGACAAATTTGAT........................................................................... 23 3 2 2.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
....................................................TTTGGTTGAAGACGTCGAGCA................................................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................AAGCAAGAAGCTAACGAAGTT............ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................GTTGAAGACGTCGAGCAGGTA............................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................ATACAGAAGCAAGAAGCTAACGAAGT............. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
................GATTGAGTCACGTCTAGAAGC..................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............AACAGATTGAGTCACGTCTAGAAGCT.................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................TTGAAGACGTCGAGCAGGTA............................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATGAGGTTGAAGACGT....................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................TGAAGACGTCGAGCAGGTACG........................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GCTAGTCGACAAAGACGTACGT......................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGTGATCGGTGTTAGTGAG............................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................TCGAGCAGGTACGGCAGTTTC................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................AGCAAGAAGCTAACGAAGTTA........... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGAAGACGTCGAGCAGGGA............................................................................................................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GACGTTGTTTTGCGCTAGTCG....................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTGATCGGTGTTAGTGAGCCA......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................GAGCAGGTACGGCAGTTTCT.................................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................ACGGCAGTTTCACATGGTTAA......................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................TCTATGTAGACTTATACAGAA............................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................ACGGCAGTTTCACATGATTAA......................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................GCAGGTACGGCAGTTTCAC................................................................................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CGCTTTCCATGAGGTTGAAGACGT....................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................TGAGGTTGAAGACGTCGAGCA................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................TTGAAGACGTCGAGCAGGTAC............................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGGTGTTAGTGAGCCAAAGCCT................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................ATCGAGCAGGTACGGCAGTTT.................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................AGGTTGAAGACGTCGAGCAGG............................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................AGTGAGCCAAAGCCTGCGATG............................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................TCTACAAGCTCTGGTCG............................................................................................................................................................................................................................................................................................................................. 17 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................ACGGCAGTTTCTCATGAT............................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................GACTTATACAGAAGCAAGAA........................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................CGACAAAGACGTGCGTTAC...................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................CGGCAGTTTCTCATGATTAAGTCTATGT................................................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................AAGAAGCAAGAAGCTAACGAAG.............. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................TCAATGAGGTTGAAGA.......................................................................................................................................................................................................................................................................................................... 16 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................................................................................AAGCAAGGAGCTAACGA................ 17 1 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................TAGAACCTCTGGTCG............................................................................................................................................................................................................................................................................................................................. 15 1 17 0.24 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0
............................................................................................................................................................................................................................................................................................................................................CAAGTAGCTAACGAAGAT............ 18 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................................................CGTTAAACTCTTCTAAAGGGC............................................................................................................................................................................................................................ 21 3 5 0.20 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
......................GTCACGTCTCGAAGC..................................................................................................................................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................CGTCAGTTTCTGATGATT........................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................AGTCAAGTCTCGAAGC..................................................................................................................................................................................................................................................................................................................................... 16 2 20 0.15 3 0 0 0 0 0 0 0 0 1 0 0 0 0 2
............................................................................................ATGGTGTCTATGTTAAATGTT......................................................................................................................................................................................................................................................... 21 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTTTTGCACTAGATGACAA................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............ACAGATTGAGTAACATC............................................................................................................................................................................................................................................................................................................................................ 17 2 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.........................................................................................ACGATTAAGTCTATG.................................................................................................................................................................................................................................................................. 15 1 13 0.08 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................GTCAGTTTCTGATGATT........................................................................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................TGGAACCTCTGGTCGCCTTC........................................................................................................................................................................................................................................................................................................................ 20 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................ACGTCGAGCAGGTAGG........................................................................................................................................................................................................................................................................................... 16 1 17 0.06 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.........................GCGTCTAGAAGCTCT.................................................................................................................................................................................................................................................................................................................................. 15 1 18 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................ACCTCGAGAACCTCTGGTCG............................................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................GGTGGAAGTCGTCGAACAGGT.............................................................................................................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
..........................................................................................................TAATGTTTTAAAAACCTTT............................................................................................................................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10747433-10747794 - dsi_13647 ATGCCCAAGTGATTGTCTAAC-TCAGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAAA--GAGT------------------------------------ACTAATTCAGATACAATTTACAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACTGAACGTGGTGGCAGCACT-----------AGCCACAA---TCACTCGG---TTTCGG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTTGTTAAAAC----TAAA-AATA--ATCTCTATTTTAATCAAAGA----TACATCT------------------------------------------GAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCA
droSec2 scaffold_1:7548178-7548536 - ATGCCCAAGTGATTGTCTAAC-TCAGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAAA--GAGT------------------------------------ACTAATTCAGATACAATTTAAAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACTAAACAAGGTGGCAGCACT-----------AGCCACTA---TCACTCGG---TCTCGG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTT---AAAAC----TAAA-AATA--ATCTATATTTTAATCAAAGA----TACATCT------------------------------------------GAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCA
dm3 chr2R:10040469-10040830 - ATGCCCAAGTGGTTGTCTAGC-TCAGTGCAAATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CTACGGA--GAGT------------------------------------ACTAGTTCAGCTAAAATTTACAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGAA-ACTAAAC--------------------------------------------------------------G-----------------------------------------------------TGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACGGAACGAGGTGGCAGCACT-----------AGCCCCAA---TCACTCGG---TTTCTG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTTGTCAAAAC----TAAA-AACA--ATCTCTATTTTAATTAAAGA----TACATCG------------------------------------------AAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCA
droEre2 scaffold_4845:15797138-15797500 + ATGCCCAAGTGATTGTCTAGC-TCCGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAGA--GAGT------------------------------------ACTAATTCAGCTAAATTTTCCAAAATTTGTG-GATATTTCA------GAAAAATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CAATCAGCTGTTTCAGCACGCCGCGGTGTTGCCAAGTCCAAGAAAACCACTGAACGAGGTGGCAGCTCT-----------AGCCCCTA---TCACTCGG---TTTTTG------------------ACGCTCTGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TATA-AATA--ATCTCTATTTGAATCAAAGA----TACATCA------------------------------------------GAATATGGCTTCGTTCTTCGACTGCTTCAATGATTTTCTGCA
droYak3 2R:9976679-9977041 - ATGCCCAAGTGATTGTCCAGT-TCCGTGCAGATTTTCGAGACCAGCGAAAGGTACT-CTAACTTCTGCAGCTCGTCCATG-C-CGTCAGA--GAGT------------------------------------ACTAATTCAGATAAATTTTCCAAAATTTGTG-GAAATTTCA------GAAAAATTTCCC---A---CTGCA-ACAAAGC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCAGCACGCCGCGGTGTTGCCAAGTGCGTGAAAACATCTGAACGAGGTGGCAGCTCT-----------AGCCCCTA---TCACTCGG---TCTGTG------------------ACGCTCCGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TATA-AATA--ATCTATATTTCAATCAAAGA----TACATCG------------------------------------------GAATATGTCTTCGTTCTTTGACTGCTTCAACGATTTTCTGCA
droEug1 scf7180000409462:2799548-2799904 + ATGCCCAAGTGATTATCCAGT-TCTGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAACTCGTCCATG-C-TGCCTGA----GT------------------------------------ATTATTTCAACTTAACTATATCTATTTTATT-GAAATAATG------GCA-AGTTTCCC---T---CTGCA-ACAA-AC--------------------------------------------------------------G-----------------------------------------------------CGGCCAGCTGTTTTTGCACGCCGCGGGGTTGCCCAA-GTATGCCAGCTGCCAAGCAAGGTGGCAACTCT-----------AGCCCCTA---TCACTCGG---TTTTCG------------------ACGCTCCGCTTA---TTATTG---TCGCGTTTTTGTTGTCAAAAG----TA--AAATA--GTCTCCGTTTTGATCTAACA----CACGTCG------------------------------------------AAATATGGCTTCGTTTTTCGATTGCTTCAACAATTTTCTCCA
droBia1 scf7180000301592:185898-186260 - ATGCCCAAATGGTTGTCCAGC-TCGGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGCCGA---AAAT------------------------------------CTTATTTCACGCTAAATATACAATATTTGTG-GAAATTTCA------GAA-AGTTTCGC---G---GTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------AGATCAGCTGTTTTTACACGCCGTAGTGTTGCTAAACGCATGCAAACGGCCGAACAAGGTGGCAACGCT-----------AGCCCCTA---GCACTCGGGTTTTTTTG------------------ACGCTCCGCTTA---TTTTTG---TCGCATTTTTGTTGTCAAACG----TA--AATTA--ATCTCTGTTTTGATCGAACG----CACATCG------------------------------------------GAATATGGCTTCATTCTTCGAGTGCTTCAACAATTTCCTGCA
droTak1 scf7180000414188:12857-13211 - ATGCCCAAGTGGTTGTCCAGC-TCGGTGCAGATCTTCGAGACCAGCGACAGGTACT-CTAACTTCTGCAGCTCATCCATG-GCCGCTAAAAGGAGT------------------------------------ACTATTTCACCTTATTTATACACAATTTGTG-GAAATTTCA------CAA-AGTTTGGC---T---CTCGAAACAA-AC--------------------------------------------------------------G-----------------------------------------------------CAATCAGCTGTTTTTACACGCCGCAGGGTTGCCA---------CATCAACCGATCGAGGTGGCAACGCT-----------AGCCCCAA---TCACTCGG---TTTTCG------------------ACGCTCCGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TG--AATAG--ATTTCTGTTTTGATCGAACG----CACATCG------------------------------------------GAAAATGTCCTCGTTCTTCGATTGCTTCAACAATTTCCTGCA
droEle1 scf7180000491349:831214-831564 + ATGCCCAAGTGGTTGTCCAGT-TCCGTGCAGATCTTTGAGACCAGCGACAGGTACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCAGA--GAGT------------------------------------CCAAGTTTACTTTAATTTTCAATAATTTGTG-GTAATTTCA------GAA-AGTTTCCC---T---CTTCA-ACAAAA---------------------------------------------------------------T-----------------------------------------------------TGATCAGCTGTTTTTTCACGCCGCGGTGTTGGTCA----------ATGGCCGATCGAGGTGGCAACGCT-----------AGCCCCTA---TCACTCGG---TTTTTG------------------ACGCTCCGCTTA---TTTTTG---TTGAGTTTTTGTTGCCAAAAA---AT--AAATAA--GTCTCTGTTTTGGTTGAACG----CATATTG------------------------------------------GAATATGTCTTCATTCTTTGAGTGCTTCAACAATTTCGTGCA
droRho1 scf7180000777200:356232-356582 - ATGCCCAAGTGGTTGTCCAGT-TCCGTGCAGATCTTTGAGACCAGCGACAGGTACT-CCAATTGCTGGAGCTCGTCCATG-C-CGCCAGA--AAGT------------------------------------CCTTTTTCACTTTAATTTTCCAAAATTTGTC-GAAATTTCA------GAA-AGTTTCCC---T---CTTTA-ACAAAT---------------------------------------------------------------C-----------------------------------------------------TGATCAGCTGTTTTTTCACGCCGCGGTGTTGGTCA----------ACTGTCGAACAAGGTGGCAACGCT-----------AGCCCCTA---TCACTCGG---TTTTAG------------------ACGCTCAGATTA---TTTTTG---TTGCGTTTTTGTTGTCAAAAA---TT--AAATAA--GTCTTTGTTTTGATCGAACG----CACATCG------------------------------------------GAATATGTCGTCGTTCTTCGAGTGCTTTAATAATTTCGTGCA
droFic1 scf7180000453948:386862-387223 + ATGCCCAAGTGGTTATCCAGT-TCCGTGCAGATTTTCGAGACCAGCGAGAGGTACT-CCAACTTCTGCAGCTCGTCCATT-C-CGCTAGA--GAGT------------------------------------CTTGTTTCACGCTACCTTTCCAAAATTTGTT-GAAATTTCA------GAA-AAATTCCC---T---CTGCA-ACAAAG---------------------------------------------------------------A-----------------------------------------------------CGATCAGCTGTTTATACACGCCGCTGTGTTGGACAACGCGTCCAAACGGGTCAAAGAGGTGGCAACGCT-----------GCCCCAGA---TCACTCGG---TTTTTG------------------ACGCTCCGCTTA---TTTTTT---TTGCGTTTTTGTTGTCAAAAG----TA--AATAAGGATCTGTTTTTTGATCGAACT----CACATCG------------------------------------------GAAAATGTCTTCGTTCTTTGAGTGCTTTAACAATTTCGTGCA
droKik1 scf7180000302385:169621-169970 - ATGCCCAGATGGTTGTCCAGC-TCCGTGCAGATCTTTGAGACCAGCGAGAGGTACT-CCAACTGCTGCAGCTCCTCCATG-C-CTCCTCC--G-GT---------C--------------------------GGTTTTTGGAGCT-----------ATTTAAA-CAAATTTCACCAATT-AA-CGCGATTTTCCACAACTCCAAACAAAA-----------------------------------------------------TGCACGCCAGG-----------------------------------------------------CAATCAGCTGTTTATGGGG---CCAGTGTTGGGCAACGC-------------CACCCAGTTCCAACACT-----------ACCC-------TTGCTCGG---TT--TG------------------ACGCTT-GCCTTTGATTGTTA---TTTTGTTTTTG------AGAT----TGTG-AATA--ATTTAGTTCTCGTTCAAATCTGTGCCCGCCC------------------------------------------AAACATGGCATCGTTTTTCGAGTGCTTCAACAATTTCCTGCA
droAna3 scaffold_13266:5879109-5879486 + ATGCCCAGATGGTTGTCCAGC-TCTGTGCAGATCTTTGAGACCAACGACAGGTACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCAGA--G--T------------------------------------ATATATTCAGCCAACTTCTTTCCAAATCGCGAGTAATTTCA------CC--AATATCCC---A---CTCCAAACAATA-----------------------------------------------------GGCACGCCGAC-----------------------------------------------------CAATCAGCTGTTTTTACACGCCATAGTGTTGGAAAACGATGCCCATTATCAGATCAAGGTGGCAACGCT-----------CACAC-TATCATTACTAGG---AATTTG------------------ACGCTC-GCCTTTT-TTAATGTTTTTGCGTT-GTATTGCGGGGAGAGTAT--TTATCC--GTTTTTGTTTTGATCCAACG----CGCGGCG------------------------------------------GAAGATGTCTTCGTTCTTTGAGTGCTTCAACAATTTCGTGCA
droBip1 scf7180000395839:36761-37125 + ATGCCCAGATGGTTGTCGAGC-TCTGTGCAGATCTTCGAGACCAGCGACAGATACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCGGA--GTAT------------------------------------ATTTCTTCAA-------------AAAT-CAA-GTAATTTCA------CCA--ATTTTCT---A---CTCCAAACAATA-----------------------------------------------------GGCACGCCGAA-----------------------------------------------------GAGTCAGCTGTTTTTAAACGCCCTAGTGTTGAAAAACGAAGCCTATTATCAGGTCGAGGTGGCAACGCT-----------CACA-CTATCATTACTCTC---GATTTG------------------ACGCTC-GCTTATT-TTAATGTTTTTGCGTT-CTATTGCGGGGAGAATAT--TTATCC--GTTTTTGTTTTGATCCAACG----CGCGGCG------------------------------------------GAAGATGTCTTCGTTCTTTGAGTGCTTCAACAATTTCGTGCA
dp5 3:2737566-2737963 - ATGCCCAAGTGATTATCGAGC-TCTGTGCAGATCTTCGAGACCAGCGACAGATACT-CCAATTGCTGCAGCTCCTCCATC-T-CGGCAGA--GCATTAACGATTTCGATTTCGAC-CTTTGCAAACTTTTCA-----------------------------CA-GC---------AATTGAA-CGCTTCTT--------TTCA-ACC------AAAAAAC--------CACAA-----------------ACAAAATGCAA--CGCACGCCGAC-----------------------------------------------------TTATCAGCTGTTCCTGG--GCTGCAGGGTTGGCAAACAGAGTTGG-CTTGTGCGTACAGTGGCAGCCCCATATA-ATAGTA--CGTGA---TTATTTGA---C--TTG------------------ACGCTC-GCTTT---TTGATGTCT-TGA-CTTACGTTGTAACAAACAAAT--CAACTA--GTTATTGCTTTGTTCAGTTG--CGCCAACCG------------------------------------------T--AATGTCTTCGTTCTTCGACTGTTTCAACAATTTTGTGCA
droPer2 scaffold_2:2927334-2927737 - ATGCCCAAGTGATTATCGAGCCTCTGTGCAGATCTTCGAGACCAGCGACAGATACTTCCAATTGCTGCAGCTC-TCCATCTC-CGGCAGA--GCATAAACGATTTCGATTTCGACCCTTTGCAAACTTTTCA-----------------------------CA-GC---------AATTGAA-CGCTTCTT--------TTCA-ACC-----CAAAAAAC-------CCACAA-----------------ACAAAATGCAA--CGCACGCCGAC-----------------------------------------------------TTATCAGCTGTTCCTGG--GCTGCAGGGTTGGCAAACAGAGTTGG-CTTGTGCGTACAGTGGCAGCCCCATTTAAATAGTA--CGTGA---TTATTTGA---C--TTG------------------ACGCTC-GCTTT---TTGATGTCT-TGA-CTTACGTTGTAACAAACAAAT--CAACTA--GTTATTGCTTTGTTCAGTTG--CGCCAACCG------------------------------------------T--AATGTCTTCGTTCTTCGACTGTTTCAACAATTTTGTGCA
droWil2 scf2_1100000004558:477445-477556 - ATGCCCAAATGGTTGTCCAAC-TCTGTACAAATTTTGGAGACCAGCGATAGATACT-CCAGCTGCTGCAATTCGTCCATG-A-TGCA-----GCGC------------------------------------TTGAATACAAACAAAATCTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:1880232-1880361 + ATGCCCAAGTGATTGTCCAGC-TCTGTGCAGATTTTCGATACCAGCGACAGGTACT-CCAGCTGCTGCAGCTCGTCCATT-T-TGCAAAA-------------------------------------------------------------------------------------------------------------------TGA-ACGCAAAAAACTG-----CCACAATAA-TTCAATAAAGTTTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droMoj3 scaffold_6496:23391432-23391508 - ATGCCCAAGTGATTGTCAAGC-TCGGTGCAGATTTTTGACACCAGGGACAGGTACT-CCAGCTTTTGCAATTCGTCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15112:3982701-3983117 + ATGCCCAAATGATTGTCTAGC-TCGGTGCAGATTTTGGAGACCAGCGATAGGTACT-CCAGTTGTTGCAGCTCTTCCATT-T-GGTCAAG--A--------------------------------------------------TA---------------------AATTTAA------CAA-A-----------------------------------CGTTTCGTGCACAAAAAATTAA---------ATAAA-----ACTCGCATGCCAACAAATAGTGTTGGTACGCGTGCAAAAACCAATGCGATAAATTGTAGCTTGCATCAAAACAGCTGTTATTTGA-----TAGTGCTGCAAAGCGCA-----ATTGGTGCATAAGGTGGCAACACT-----------TTCA-------TTACTCT--------TGACATATTTTGAGCAAGCTATGCTC-GCTTT---TTAATGTTT-TGT----ATATTG-------------TTTA-T-----------------AAGCTG--TTTCAAACGTACGATTTGAGTTCACGTATCACGTTGTTTGCCACACGCTAAGGAAATGTCTTCGTTTTTCGAGTGCTTTAATAATTTCGTGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGCCCAAGTGATTGTCTAAC-TCAGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAAA--GAGT------------------------------------ACTAATTCAGATACAATTTACAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACTGAACGTGGTGGCAGCACT-----------AGCCACAA---TCACTCGG---TTTCGG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTTGTTAAAAC----TAAA-AATA--ATCTCTATTTTAATCAAAGA----TACATCT------------------------------------------GAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TTTCGG------------------ACGC...........................................................................................................................................................................1816.00641100000000000000
.........TGATTGTCTAAC-TCAGTGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300001000000002000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGA----TACATCT------------------------------------------GAATATGTC.................................2212.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................A---TCACTCGG---TTTCGG------------------ACGC...........................................................................................................................................................................1912.00220000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AAACAACTGAACGTGGTGGCA.............................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGG------------------ACGCTACGCTTA---ATTT............................................................................................................................................................2211.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCGG---TTTCGG------------------ACGCTAC........................................................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................TGTG-GAAATTTTA------GAA-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACAA---TCACTCGG---TTTCGG------------------AC.............................................................................................................................................................................2411.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTA---ATTTCG---TCGCGTTTT..............................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AA---TCACTCGG---TTTCGG------------------AC.............................................................................................................................................................................1811.00101000000000000000
...........................GCAGATCTTCGAGACCAGCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---TTTCGG------------------ACGCTACGCTTG---G...............................................................................................................................................................2211.00100000000000001000
...............TCTAAC-TCAGTGCAGATCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---TTTCGG------------------ACGCTACGCTTA---T...............................................................................................................................................................2211.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGG------------------ACGCTACGCTTA---ATTT............................................................................................................................................................2111.00100000000000001000
.........................................................................................................................................................................................................CA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTT.................................................................................................................................................................................................................................................................................................2211.00100000000010000000
..........................TGCAGATCTTCGAGACCAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTTTTTGTTGTTAAAAC----T.............................................................................................................................2211.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGG---TTTCGG------------------ACGCTACGCTTG---T...............................................................................................................................................................2211.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---ATTTCG---TCGCGTTTTTGT...........................................................................................................................................2111.00100000000000001000
...........................GCAGATCTTCGAGACCAGCGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000000001000
droSec2
ATGCCCAAGTGATTGTCTAAC-TCAGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAAA--GAGT------------------------------------ACTAATTCAGATACAATTTAAAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACTAAACAAGGTGGCAGCACT-----------AGCCACTA---TCACTCGG---TCTCGG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTT---AAAAC----TAAA-AATA--ATCTATATTTTAATCAAAGA----TACATCT------------------------------------------GAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................AGTGCAGATCTTCGAGACCAGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................CACTA---TCACTCGG---TCTCGG------------------ACGCTAC........................................................................................................................................................................2611.0011000
.......................CAGTGCAGATCTTCGAGACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TCTCGG------------------ACGCTA.........................................................................................................................................................................2011.0010100
dm3
ATGCCCAAGTGGTTGTCTAGC-TCAGTGCAAATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CTACGGA--GAGT------------------------------------ACTAGTTCAGCTAAAATTTACAAAATTTGTG-GAAATTTTA------GAA-AATTTCCC---G---CTGAA-ACTAAAC--------------------------------------------------------------G-----------------------------------------------------TGATCAGCTGTTTCTGCACGCAATGGTGTTGCCAGGCGCGTAAAAACAACGGAACGAGGTGGCAGCACT-----------AGCCCCAA---TCACTCGG---TTTCTG------------------ACGCTACGCTTA---ATTTCG---TCGCGTTTTTGTTGTCAAAAC----TAAA-AACA--ATCTCTATTTTAATTAAAGA----TACATCG------------------------------------------AAATATGTCTTCGTTCTTCGATTGCTTCAATGATTTTCTGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCG---TCGCGTTTTTGTTGTC.......................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000020000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TACATCG------------------------------------------AAATATGTCTTCG.............................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000020000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCTTCGTTCTTCGATT...................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAGA----TACATCG------------------------------------------AAATATGTCT................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTACGCTTA---ATTTCG---TCG....................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTTCGTTCTTCGATTGCTTC..............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG------------------------------------------AAATATGTCTTCGTTCTTC.......................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGCTTA---ATTTCG---TCGCGT.................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTTCG---TCGCGTTTTTGTTGTCAAAAC----T.............................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------------ACGCTACGCTTA---ATTTCG---.......................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGG---TTTCTG------------------ACGCTACGCTT....................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG------------------ACGCTACGCTTA---ATTTCG---TC.....................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATTAAAGA----TACATCG------------------------------------------AAA.......................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG------------------ACGCTACGCTTA---ATTTCG---.......................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA---ATTTCG---TCGCGTTTTTGT...........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACT-----------AGCCCCAA---TCACTCGG---.......................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTTCG---TCGCGTTTTTGTTGTC.......................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGG---TTTCTG------------------ACGCTACGCTTA---ATT.............................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................A---TCACTCGG---TTTCTG------------------ACGC...........................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG------------------------------------------AAATATGTCTTCGTTCTT........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TTTCTG------------------ACGCTACG.......................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAAAAC----TAAA-AACA--ATCTCTATT..........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AA---TCACTCGG---TTTCTG------------------ACGC...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTTCG---TCGCGTTTTTGTTG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TGAA-ACTAAAC--------------------------------------------------------------G-----------------------------------------------------TGATCAGCTGT..................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GGAACGAGGTGGCAGCACT-----------AGCCC........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTA---ATTTCG---TCGCGTTTTTG............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAAAAC----TAAA-AACA--ATCTCT.............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGA----TACATCG------------------------------------------AAATATGT..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGTCTTCGTTCTTCGAT....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGA----TACATCG------------------------------------------AAATATG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................CATG-C-CTACGGA--GAGT------------------------------------ACTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTTCTTCGATTGCT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---TCGCGTTTTTGTTGTCAAC....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG---TCGCGTTTTTGTTGTCA......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................TCTGCAGCTCGTCCATG-C-CTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AACTTCTGCAGCTCGTCCATG-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTG------------------ACGCTACGCTTA---ATTTC...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTGCTTCAATGATTTTCTGCA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TTTCTG------------------ACGCTACGCTTA---A...............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CCCAA---TCACTCGG---TTTCTG------------------A..............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TTTCTG------------------ACGCTACGCT.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCGG---TTTCTG------------------ACGCTA.........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTTA---ATTTCG---TCGCGTTT...............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TTCGAGACCAGCGAAAGGTACT-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTA---ATTTCG---TCGCGTTTTTGTTG.........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AA---TCACTCGG---TTTCTG------------------ACG............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CTGTTTCTGCACGCAATGGTGTT...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTCGG---TTTCTG------------------ACGCTAC........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTCTTCGATTGCTTC..............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGG---TTTCTG------------------ACGCTACG.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCG------------------------------------------AAATATGTCTTCGTTCTTCGAT....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGTTCTTCGATTGCTTCAATGAT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATATGTCTTCGTTCTTCG......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGA----TACATCG------------------------------------------AAATATGTCT................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................A---TCACTCGG---TTTCTG------------------ACGCTAC........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CAGGCGCGTAAAAACAACGGA........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTCTTCGATTGCTTCAA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CGTAAAAACAACGGAACGAGG..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTTCG---TCGCGTTTTTG............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTACGCTTA---ATTTCG---TCG....................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................AACTTCTGCAGCTCGTCCATG-C-C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCGATTGCTTCAATGA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTTTTTGTTGTCAAAAC----T.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGG---TTTCTG------------------ACGCTAC........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................CAA---TCACTCGG---TTTCTG------------------ACGC...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCGG---TTTCTG------------------ACGCTAC........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGTTCTTCGATTGCTTC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTTTTTGTTGTCAAAAC----TAA...........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG---TCGCGTTTTTGTTGTCAAA....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------ACGCTACGCTTA---ATTTCG---TCG....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGG---TTTCTG------------------ACGCTACGCTTA---A...............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGCACT-----------AGCCCCAA---TCACTCGG---TTTC...................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG---TCGCGTTTTTGTTGTCAAAA...................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTTTTTGTTGTCAAAAC----..............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GAACGAGGTGGCAGCACT-----------AGCCC........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
droEre2
ATGCCCAAGTGATTGTCTAGC-TCCGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGTCAGA--GAGT------------------------------------ACTAATTCAGCTAAATTTTCCAAAATTTGTG-GATATTTCA------GAAAAATTTCCC---G---CTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------CAATCAGCTGTTTCAGCACGCCGCGGTGTTGCCAAGTCCAAGAAAACCACTGAACGAGGTGGCAGCTCT-----------AGCCCCTA---TCACTCGG---TTTTTG------------------ACGCTCTGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TATA-AATA--ATCTCTATTTGAATCAAAGA----TACATCA------------------------------------------GAATATGGCTTCGTTCTTCGACTGCTTCAATGATTTTCTGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTA---TTTTTG---TCGCGTTTTTGT...........................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA----TACATCA------------------------------------------GAATATGGCTT...............................2011.0010000010
droYak3
ATGCCCAAGTGATTGTCCAGT-TCCGTGCAGATTTTCGAGACCAGCGAAAGGTACT-CTAACTTCTGCAGCTCGTCCATG-C-CGTCAGA--GAGT------------------------------------ACTAATTCAGATAAATTTTCCAAAATTTGTG-GAAATTTCA------GAAAAATTTCCC---A---CTGCA-ACAAAGC--------------------------------------------------------------G-----------------------------------------------------CGATCAGCTGTTTCAGCACGCCGCGGTGTTGCCAAGTGCGTGAAAACATCTGAACGAGGTGGCAGCTCT-----------AGCCCCTA---TCACTCGG---TCTGTG------------------ACGCTCCGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TATA-AATA--ATCTATATTTCAATCAAAGA----TACATCG------------------------------------------GAATATGTCTTCGTTCTTTGACTGCTTCAACGATTTTCTGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTCTTTGACTGCTTCAACGATT.......2512.00202000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTCTTTGACTGCTTCAACGATTTT.....2711.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGCTCT-----------AGCCCCTA---TCACTCGG---TCTGTG------------------A..............................................................................................................................................................................2911.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGCTTA---TTTTTG---TCGCGTT................................................................................................................................................2311.00100000010000
............................CAGATTTTCGAGACCAGCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATCAAAGA----TACATCG------------------------------------------G.........................................2011.00100000010000
droEug1
ATGCCCAAGTGATTATCCAGT-TCTGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAACTCGTCCATG-C-TGCCTGA----GT------------------------------------ATTATTTCAACTTAACTATATCTATTTTATT-GAAATAATG------GCA-AGTTTCCC---T---CTGCA-ACAA-AC--------------------------------------------------------------G-----------------------------------------------------CGGCCAGCTGTTTTTGCACGCCGCGGGGTTGCCCAA-GTATGCCAGCTGCCAAGCAAGGTGGCAACTCT-----------AGCCCCTA---TCACTCGG---TTTTCG------------------ACGCTCCGCTTA---TTATTG---TCGCGTTTTTGTTGTCAAAAG----TA--AAATA--GTCTCCGTTTTGATCTAACA----CACGTCG------------------------------------------AAATATGGCTTCGTTTTTCGATTGCTTCAACAATTTTCTCCASizeHit CountTotal NormTotal
No Reads
droBia1
ATGCCCAAATGGTTGTCCAGC-TCGGTGCAGATCTTCGAGACCAGCGAAAGGTACT-CCAACTTCTGCAGCTCGTCCATG-C-CGCCGA---AAAT------------------------------------CTTATTTCACGCTAAATATACAATATTTGTG-GAAATTTCA------GAA-AGTTTCGC---G---GTGCA-ACAAAAC--------------------------------------------------------------G-----------------------------------------------------AGATCAGCTGTTTTTACACGCCGTAGTGTTGCTAAACGCATGCAAACGGCCGAACAAGGTGGCAACGCT-----------AGCCCCTA---GCACTCGGGTTTTTTTG------------------ACGCTCCGCTTA---TTTTTG---TCGCATTTTTGTTGTCAAACG----TA--AATTA--ATCTCTGTTTTGATCGAACG----CACATCG------------------------------------------GAATATGGCTTCATTCTTCGAGTGCTTCAACAATTTCCTGCASizeHit CountTotal NormTotal
No Reads
droTak1
ATGCCCAAGTGGTTGTCCAGC-TCGGTGCAGATCTTCGAGACCAGCGACAGGTACT-CTAACTTCTGCAGCTCATCCATG-GCCGCTAAAAGGAGT------------------------------------ACTATTTCACCTTATTTATACACAATTTGTG-GAAATTTCA------CAA-AGTTTGGC---T---CTCGAAACAA-AC--------------------------------------------------------------G-----------------------------------------------------CAATCAGCTGTTTTTACACGCCGCAGGGTTGCCA---------CATCAACCGATCGAGGTGGCAACGCT-----------AGCCCCAA---TCACTCGG---TTTTCG------------------ACGCTCCGCTTA---TTTTTG---TCGCGTTTTTGTTGTCAAAAG----TG--AATAG--ATTTCTGTTTTGATCGAACG----CACATCG------------------------------------------GAAAATGTCCTCGTTCTTCGATTGCTTCAACAATTTCCTGCASizeHit CountTotal NormTotal
No Reads
droEle1
ATGCCCAAGTGGTTGTCCAGT-TCCGTGCAGATCTTTGAGACCAGCGACAGGTACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCAGA--GAGT------------------------------------CCAAGTTTACTTTAATTTTCAATAATTTGTG-GTAATTTCA------GAA-AGTTTCCC---T---CTTCA-ACAAAA---------------------------------------------------------------T-----------------------------------------------------TGATCAGCTGTTTTTTCACGCCGCGGTGTTGGTCA----------ATGGCCGATCGAGGTGGCAACGCT-----------AGCCCCTA---TCACTCGG---TTTTTG------------------ACGCTCCGCTTA---TTTTTG---TTGAGTTTTTGTTGCCAAAAA---AT--AAATAA--GTCTCTGTTTTGGTTGAACG----CATATTG------------------------------------------GAATATGTCTTCATTCTTTGAGTGCTTCAACAATTTCGTGCASizeHit CountTotal NormTotal
No Reads
droRho1
ATGCCCAAGTGGTTGTCCAGT-TCCGTGCAGATCTTTGAGACCAGCGACAGGTACT-CCAATTGCTGGAGCTCGTCCATG-C-CGCCAGA--AAGT------------------------------------CCTTTTTCACTTTAATTTTCCAAAATTTGTC-GAAATTTCA------GAA-AGTTTCCC---T---CTTTA-ACAAAT---------------------------------------------------------------C-----------------------------------------------------TGATCAGCTGTTTTTTCACGCCGCGGTGTTGGTCA----------ACTGTCGAACAAGGTGGCAACGCT-----------AGCCCCTA---TCACTCGG---TTTTAG------------------ACGCTCAGATTA---TTTTTG---TTGCGTTTTTGTTGTCAAAAA---TT--AAATAA--GTCTTTGTTTTGATCGAACG----CACATCG------------------------------------------GAATATGTCGTCGTTCTTCGAGTGCTTTAATAATTTCGTGCASizeHit CountTotal NormTotal
No Reads
droFic1
ATGCCCAAGTGGTTATCCAGT-TCCGTGCAGATTTTCGAGACCAGCGAGAGGTACT-CCAACTTCTGCAGCTCGTCCATT-C-CGCTAGA--GAGT------------------------------------CTTGTTTCACGCTACCTTTCCAAAATTTGTT-GAAATTTCA------GAA-AAATTCCC---T---CTGCA-ACAAAG---------------------------------------------------------------A-----------------------------------------------------CGATCAGCTGTTTATACACGCCGCTGTGTTGGACAACGCGTCCAAACGGGTCAAAGAGGTGGCAACGCT-----------GCCCCAGA---TCACTCGG---TTTTTG------------------ACGCTCCGCTTA---TTTTTT---TTGCGTTTTTGTTGTCAAAAG----TA--AATAAGGATCTGTTTTTTGATCGAACT----CACATCG------------------------------------------GAAAATGTCTTCGTTCTTTGAGTGCTTTAACAATTTCGTGCASizeHit CountTotal NormTotal
No Reads
droKik1
ATGCCCAGATGGTTGTCCAGC-TCCGTGCAGATCTTTGAGACCAGCGAGAGGTACT-CCAACTGCTGCAGCTCCTCCATG-C-CTCCTCC--G-GT---------C--------------------------GGTTTTTGGAGCT-----------ATTTAAA-CAAATTTCACCAATT-AA-CGCGATTTTCCACAACTCCAAACAAAA-----------------------------------------------------TGCACGCCAGG-----------------------------------------------------CAATCAGCTGTTTATGGGG---CCAGTGTTGGGCAACGC-------------CACCCAGTTCCAACACT-----------ACCC-------TTGCTCGG---TT--TG------------------ACGCTT-GCCTTTGATTGTTA---TTTTGTTTTTG------AGAT----TGTG-AATA--ATTTAGTTCTCGTTCAAATCTGTGCCCGCCC------------------------------------------AAACATGGCATCGTTTTTCGAGTGCTTCAACAATTTCCTGCASizeHit CountTotal NormTotal
No Reads
droAna3
ATGCCCAGATGGTTGTCCAGC-TCTGTGCAGATCTTTGAGACCAACGACAGGTACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCAGA--G--T------------------------------------ATATATTCAGCCAACTTCTTTCCAAATCGCGAGTAATTTCA------CC--AATATCCC---A---CTCCAAACAATA-----------------------------------------------------GGCACGCCGAC-----------------------------------------------------CAATCAGCTGTTTTTACACGCCATAGTGTTGGAAAACGATGCCCATTATCAGATCAAGGTGGCAACGCT-----------CACAC-TATCATTACTAGG---AATTTG------------------ACGCTC-GCCTTTT-TTAATGTTTTTGCGTT-GTATTGCGGGGAGAGTAT--TTATCC--GTTTTTGTTTTGATCCAACG----CGCGGCG------------------------------------------GAAGATGTCTTCGTTCTTTGAGTGCTTCAACAATTTCGTGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GTATTGCGGGGAGAGTAT--...........................................................................................................................1911.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTT-GTATTGCGGGGAGAGTAT--TT.........................................................................................................................2411.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAT--TTATCC--GTTTTTGTTTTGATCC...................................................................................................2611.001010000
droBip1
ATGCCCAGATGGTTGTCGAGC-TCTGTGCAGATCTTCGAGACCAGCGACAGATACT-CCAACTGCTGCAGCTCGTCCATG-C-CGCCGGA--GTAT------------------------------------ATTTCTTCAA-------------AAAT-CAA-GTAATTTCA------CCA--ATTTTCT---A---CTCCAAACAATA-----------------------------------------------------GGCACGCCGAA-----------------------------------------------------GAGTCAGCTGTTTTTAAACGCCCTAGTGTTGAAAAACGAAGCCTATTATCAGGTCGAGGTGGCAACGCT-----------CACA-CTATCATTACTCTC---GATTTG------------------ACGCTC-GCTTATT-TTAATGTTTTTGCGTT-CTATTGCGGGGAGAATAT--TTATCC--GTTTTTGTTTTGATCCAACG----CGCGGCG------------------------------------------GAAGATGTCTTCGTTCTTTGAGTGCTTCAACAATTTCGTGCASizeHit CountTotal NormTotal
No Reads
dp5
ATGCCCAAGTGATTATCGAGC-TCTGTGCAGATCTTCGAGACCAGCGACAGATACT-CCAATTGCTGCAGCTCCTCCATC-T-CGGCAGA--GCATTAACGATTTCGATTTCGAC-CTTTGCAAACTTTTCA-----------------------------CA-GC---------AATTGAA-CGCTTCTT--------TTCA-ACC------AAAAAAC--------CACAA-----------------ACAAAATGCAA--CGCACGCCGAC-----------------------------------------------------TTATCAGCTGTTCCTGG--GCTGCAGGGTTGGCAAACAGAGTTGG-CTTGTGCGTACAGTGGCAGCCCCATATA-ATAGTA--CGTGA---TTATTTGA---C--TTG------------------ACGCTC-GCTTT---TTGATGTCT-TGA-CTTACGTTGTAACAAACAAAT--CAACTA--GTTATTGCTTTGTTCAGTTG--CGCCAACCG------------------------------------------T--AATGTCTTCGTTCTTCGACTGTTTCAACAATTTTGTGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................A---TTATTTGA---C--TTG------------------ACGCTC-GC......................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CGCCAACCG------------------------------------------T--AATGTCTTCGTT...........................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CGTGA---TTATTTGA---C--TTG------------------ACG............................................................................................................................................................................2011.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGACTGTTTCAACAATTT......2111.0010000000010
droPer2
ATGCCCAAGTGATTATCGAGCCTCTGTGCAGATCTTCGAGACCAGCGACAGATACTTCCAATTGCTGCAGCTC-TCCATCTC-CGGCAGA--GCATAAACGATTTCGATTTCGACCCTTTGCAAACTTTTCA-----------------------------CA-GC---------AATTGAA-CGCTTCTT--------TTCA-ACC-----CAAAAAAC-------CCACAA-----------------ACAAAATGCAA--CGCACGCCGAC-----------------------------------------------------TTATCAGCTGTTCCTGG--GCTGCAGGGTTGGCAAACAGAGTTGG-CTTGTGCGTACAGTGGCAGCCCCATTTAAATAGTA--CGTGA---TTATTTGA---C--TTG------------------ACGCTC-GCTTT---TTGATGTCT-TGA-CTTACGTTGTAACAAACAAAT--CAACTA--GTTATTGCTTTGTTCAGTTG--CGCCAACCG------------------------------------------T--AATGTCTTCGTTCTTCGACTGTTTCAACAATTTTGTGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT-TGA-CTTACGTTGTAAC.....................................................................................................................................1914.004400000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAAACAAAT--CAACTA--GTTATTGC...........................................................................................................2811.001010000
droWil2
ATGCCCAAATGGTTGTCCAAC-TCTGTACAAATTTTGGAGACCAGCGATAGATACT-CCAGCTGCTGCAATTCGTCCATG-A-TGCA-----GCGC------------------------------------TTGAATACAAACAAAATCTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ATGCCCAAGTGATTGTCCAGC-TCTGTGCAGATTTTCGATACCAGCGACAGGTACT-CCAGCTGCTGCAGCTCGTCCATT-T-TGCAAAA-------------------------------------------------------------------------------------------------------------------TGA-ACGCAAAAAACTG-----CCACAATAA-TTCAATAAAGTTTATAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........ATTGTCCAGC-TCTGTGCAGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
ATGCCCAAGTGATTGTCAAGC-TCGGTGCAGATTTTTGACACCAGGGACAGGTACT-CCAGCTTTTGCAATTCGTCCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATGCCCAAATGATTGTCTAGC-TCGGTGCAGATTTTGGAGACCAGCGATAGGTACT-CCAGTTGTTGCAGCTCTTCCATT-T-GGTCAAG--A--------------------------------------------------TA---------------------AATTTAA------CAA-A-----------------------------------CGTTTCGTGCACAAAAAATTAA---------ATAAA-----ACTCGCATGCCAACAAATAGTGTTGGTACGCGTGCAAAAACCAATGCGATAAATTGTAGCTTGCATCAAAACAGCTGTTATTTGA-----TAGTGCTGCAAAGCGCA-----ATTGGTGCATAAGGTGGCAACACT-----------TTCA-------TTACTCT--------TGACATATTTTGAGCAAGCTATGCTC-GCTTT---TTAATGTTT-TGT----ATATTG-------------TTTA-T-----------------AAGCTG--TTTCAAACGTACGATTTGAGTTCACGTATCACGTTGTTTGCCACACGCTAAGGAAATGTCTTCGTTTTTCGAGTGCTTTAATAATTTCGTGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCACGTATCACGTTGT........................................................2011.00110

Generated: 05/19/2015 at 12:51 PM