ID:

dsi_1364

Coordinate:

2l:15890-16039 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.1 -11.1 -10.3 -10.3

Flybase annnotation

CDS [2l_16040_16444_-]; exon [2l_16040_16444_-]; intron [2l_15556_16039_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGCAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTAAAAATGACAAATTAAGGTTATATAACGAGTTCACTAAATTGCTTATCTATATAGGTATTTATATGTAATCTGTACACCTTATGGACCTGAACTAGGCGATAGCCATATCAGGCATTATCGTACCGGTATAAGCTAAAGACATTCGTATT
*****************************************************************************************************************....(((......((.(((((......(((.....((((((........))))))....))).......))))).)))))*********************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
M025
embryo
M053
female body
O001
Testis
GSM343915
embryo
M024
male body
O002
Head
SRR553485
Chicharo_3 day-old ovaries
M023
head
SRR553487
NRT_0-2 hours eggs
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 29 0 1 373.00 373 0 367 4 0 0 1 0 0 1 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTGAAC......................................................... 26 0 1 155.00 155 5 66 77 7 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 25 0 1 139.00 139 119 20 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 27 0 1 125.00 125 123 0 1 0 0 1 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 27 0 1 93.00 93 1 91 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTATCG............................. 28 0 1 61.00 61 38 0 22 0 1 0 0 0 0 0
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 28 0 1 60.00 60 0 58 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTCGT... 18 0 1 57.00 57 57 0 0 0 0 0 0 0 0 0
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCC...................................................................................................................................................................................... 28 0 1 46.00 46 1 33 11 0 1 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTATC.............................. 27 0 1 46.00 46 44 0 1 0 1 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 24 0 1 44.00 44 44 0 0 0 0 0 0 0 0 0
...................TGACGGATTAATTCTAGAGAATTTGT............................................................................................................................................................................................................. 26 0 1 42.00 42 39 1 0 0 2 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGC.................................................................................................................................................................................................. 23 0 1 36.00 36 34 0 0 0 1 0 1 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCACTAAA............................................................................................................... 26 0 1 32.00 32 28 0 1 2 1 0 0 0 0 0
.............AAAATCTGACGGATTAATTCTAGAGA................................................................................................................................................................................................................... 26 0 1 29.00 29 0 13 14 0 1 1 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTCG............................................................................................................................................................................................... 26 0 1 28.00 28 28 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTATCGT............................ 29 0 1 25.00 25 25 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTGA........................................................... 24 0 1 25.00 25 2 5 15 2 0 1 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTAT............................... 26 0 1 23.00 23 21 0 2 0 0 0 0 0 0 0
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCG..................................................................................................................................................................................... 29 1 1 22.00 22 0 22 0 0 0 0 0 0 0 0
.....................................................................................TAAGAACATTGCATTAAAAATGACAAAT......................................................................................................................................... 28 0 1 22.00 22 8 0 14 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTGAA.......................................................... 25 0 1 21.00 21 0 9 12 0 0 0 0 0 0 0
.....................................GAATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 23 0 1 21.00 21 21 0 0 0 0 0 0 0 0 0
.......................................ATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 19 0 1 19.00 19 19 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCACTAAAT.............................................................................................................. 27 0 1 18.00 18 15 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACATTCGTA.. 27 0 1 18.00 18 18 0 0 0 0 0 0 0 0 0
...................TGACGGATTAATTCTAGAGAATTTGTT............................................................................................................................................................................................................ 27 0 1 17.00 17 16 0 1 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGG....................................................................................................................................................................................................... 18 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACATTCGT... 26 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTGAACTA....................................................... 28 0 1 15.00 15 1 3 11 0 0 0 0 0 0 0
..........................TTAATTCTAGAGAATTTGTTCAAGGTA..................................................................................................................................................................................................... 27 0 1 15.00 15 15 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAG........................................................................................................................ 17 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCACTAA................................................................................................................ 25 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0
..............................TTCTAGAGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 27 0 1 14.00 14 13 0 1 0 0 0 0 0 0 0
.......................................ATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 21 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTCGTA.. 19 0 1 14.00 14 14 0 0 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAATTCTAGAGAA.................................................................................................................................................................................................................. 27 0 1 13.00 13 0 4 9 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGT...................................................................................................................................................................................................... 19 0 1 13.00 13 13 0 0 0 0 0 0 0 0 0
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCC..................................................................................................................................................................................... 29 1 1 13.00 13 0 13 0 0 0 0 0 0 0 0
.........TGGAAAAATCTGACGGATTAATT.......................................................................................................................................................................................................................... 23 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0
...........................TAATTCTAGAGAATTTGTTCAAGGTA..................................................................................................................................................................................................... 26 0 1 12.00 12 11 0 1 0 0 0 0 0 0 0
..............................TTCTAGAGAATTTGTTCAAGGTAAGC.................................................................................................................................................................................................. 26 0 1 12.00 12 11 0 1 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGA......................................................................................................................... 16 0 1 12.00 12 12 0 0 0 0 0 0 0 0 0
.................TCTGACGGATTAATTCTAGAGAATT................................................................................................................................................................................................................ 25 0 1 11.00 11 7 2 1 0 0 0 0 1 0 0
.............AAAATCTGACGGATTAATTCTAGA..................................................................................................................................................................................................................... 24 0 1 11.00 11 0 4 5 2 0 0 0 0 0 0
.TAGCTTTGTGGAAAAATCTGACGGA................................................................................................................................................................................................................................ 25 0 1 10.00 10 7 2 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTA................................ 25 0 1 10.00 10 10 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTCGTATT 21 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCACTA................................................................................................................. 24 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATGAC............................................................................................................................................. 25 0 1 9.00 9 8 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCAT.................................. 23 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0
.TAGCTTTGTGGAAAAATCTGACGGAT............................................................................................................................................................................................................................... 26 0 1 8.00 8 1 4 3 0 0 0 0 0 0 0
.........TGGAAAAATCTGACGGATTAATTC......................................................................................................................................................................................................................... 24 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATT................................. 24 0 1 8.00 8 7 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTGAACT........................................................ 27 0 1 8.00 8 0 7 1 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 21 0 1 8.00 8 8 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATCTGTACACCTTATGGACCTGAAC......................................................... 25 0 1 8.00 8 0 2 6 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCACT.................................................................................................................. 23 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCATA.......................................... 26 0 1 7.00 7 1 2 3 0 0 0 0 1 0 0
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCC...................................................................................................................................................................................... 27 0 1 7.00 7 0 4 3 0 0 0 0 0 0 0
...............................................................................................................................................................................CACCTTATGGACCTGAACTAGGCGAT................................................. 26 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.........................................................................................................TGACAAATTAAGGTTATATAACGAGT....................................................................................................................... 26 0 1 7.00 7 4 0 3 0 0 0 0 0 0 0
...................................................TAAGCTCGCAAGAAGCCTTTAGTGCAC............................................................................................................................................................................ 27 0 1 7.00 7 4 0 3 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGT....................................................................................................................... 18 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 18 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
........................................................................................................................ATATAACGAGTTCACTAAA............................................................................................................... 19 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAG................................................................................................................................................................................................... 22 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCAC................................................................................................................... 22 0 1 7.00 7 7 0 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGACGG................................................................................................................................................................................................................................. 19 0 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.......TGTGGAAAAATCTGACGGATTAATTC......................................................................................................................................................................................................................... 26 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTCGCA............................................................................................................................................................................................. 28 0 1 6.00 6 4 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................TGTAATCTGTACACCTTATGGACCTGAAC......................................................... 29 0 1 6.00 6 0 5 1 0 0 0 0 0 0 0
................................................................................................................................................................TATATGTAATCTGTACACCTTATGGACC.............................................................. 28 0 1 6.00 6 0 6 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TCTGTACACCTTATGGACCTGAAC......................................................... 24 0 1 6.00 6 0 5 1 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAATTCTAGAG.................................................................................................................................................................................................................... 25 0 1 6.00 6 0 1 5 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCT............................................................. 22 0 1 6.00 6 0 4 0 1 0 0 1 0 0 0
................................................................................................................................................................................ACCTTATGGACCTGAACTAGGCGAT................................................. 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCTG..................................................................................................................................................................................................................................... 18 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..........................TTAATTCTAGAGAATTTGTTCAAGGT...................................................................................................................................................................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..............................................................................TAATACATAAGAACATTGCATTAAAAA................................................................................................................................................. 27 0 1 5.00 5 0 2 3 0 0 0 0 0 0 0
.........................................................................................................TGACAAATTAAGGTTATATAACGAGTT...................................................................................................................... 27 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGACGGATTAATTC......................................................................................................................................................................................................................... 27 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACCTG............................................................ 23 0 1 5.00 5 1 0 3 1 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCC...................................................................................................................................................................................... 26 0 1 5.00 5 0 0 5 0 0 0 0 0 0 0
.......................................................................................................................TATATAACGAGTTCACTAAATTGCT.......................................................................................................... 25 0 1 5.00 5 4 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................TATGTAATCTGTACACCTTATGGACC.............................................................. 26 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAG........................................................................................................................................................................................................ 17 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAA.................................................................................................................................................................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACACCTTATGGACCTGAACTAGGCGAT................................................. 28 0 1 5.00 5 2 2 1 0 0 0 0 0 0 0
......................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCATATC........................................ 28 0 1 5.00 5 0 5 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGACC.............................................................. 21 0 1 5.00 5 2 2 0 1 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTT...................................................................................................................... 19 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
............................AATTCTAGAGAATTTGTT............................................................................................................................................................................................................ 18 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTC................................................................................................................................................................................................ 16 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACACCTTATGGACCTGAACTAGGCGAT................................................. 27 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTA..................................................................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...................TGACGGATTAATTCTAGAGAATTTG.............................................................................................................................................................................................................. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....TTTGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...........................TAATTCTAGAGAATTTGTTCAAGGT...................................................................................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCTGA.................................................................................................................................................................................................................................... 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..........................TTAATTCTAGAGAATT................................................................................................................................................................................................................ 16 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTCGTAT. 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.................................................................................TACATAAGAACATTGCATTAAAAA................................................................................................................................................. 24 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TATGGACCTGAACTAGGCGATAGCCA............................................ 26 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCG..................................................................................................................................................................................... 28 1 1 4.00 4 0 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAAG........... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTATAAGCTAAAGACATTCGT... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.........................................TTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TAGCCATATCAGGCATTATCGTAC.......................... 24 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.TAGCTTTGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.TAGCTTTGTGGAAAAATCTGACGG................................................................................................................................................................................................................................. 24 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................ATTTGTTCAAGGTAAGC.................................................................................................................................................................................................. 17 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCAGGCATTATCGTACCGGTA..................... 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAA.................................................................................................................................................. 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.........................................................................................................................TATAACGAGTTCACTAAA............................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.............................................................AGAAGCCTTTAGTGCACT........................................................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................TAAGAACATTGCATTAAAAATGACAAA.......................................................................................................................................... 27 0 1 4.00 4 1 1 2 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCTT.................................................................................................................................................................................... 28 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0
..............................................CAAGGTAAGCTCGCAAGAAGCCTTT................................................................................................................................................................................... 25 0 1 4.00 4 3 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACCGGTATAAGCTAAAGACATTCGTA.. 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCT...................................................................................................................................................................................................................................... 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................TAAGAACATTGCATTAAAAATGACA............................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TAGGTATTTATATGTAATCTGTACACC....................................................................... 27 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAATTCTAGAGAATT................................................................................................................................................................................................................ 29 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0
............................................TTCAAGGTAAGCTCGCAAGAAGCCTT.................................................................................................................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0
............................................................AAGAAGCCTTTAGTGCACTAATACA..................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................GATTAATTCTAGAGAATTTGT............................................................................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TAGCCATATCAGGCATTATCGTACCGG....................... 27 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TATAAGCTAAAGACATTCGT... 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCA...................................................................................................................................................................................... 28 1 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.....................................GAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.........................................................................TGCACTAATACATAAGAACATTGCATT...................................................................................................................................................... 27 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0
............................................................................................................................................TGCTTATCTATATAGGT............................................................................................. 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAA................................................................................................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGCTTATCTATATAGGT............................................................................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.....................................................AGCTCGCAAGAAGCCTTTAGTGCAC............................................................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...................................GAGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTATGGACCTGAACTAGGCGATAGCC............................................. 26 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATGACAAAT......................................................................................................................................... 29 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................AGAAGCCTTTAGTGCACTAATACATA................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................AGAGAATTTGTTCAAGGTAAGCTCT............................................................................................................................................................................................... 25 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...............AATCTGACGGATTAATTC......................................................................................................................................................................................................................... 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....CTTTGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................AATTCTAGAGAATTTGT............................................................................................................................................................................................................. 17 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TAGCCATATCAGGCATTATCGTACC......................... 25 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
........................................TTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 18 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.....TTTGTGGAAAAATCTGACGGATTAATT.......................................................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...............................................AAGGTAAGCTCGCAAGAAGCC...................................................................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CATATCAGGCATTATCGTACCGGTA..................... 25 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.........TGGAAAAATCTGACGGATTAAT........................................................................................................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................TCAAGGTAAGCTCGCAAGAAGCCTT.................................................................................................................................................................................... 25 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGA.................................................................................................................................................................................................................................... 16 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..AGCTTTGTGGAAAAATCTG..................................................................................................................................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCAT........................................... 25 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0
.....TTTGTGGAAAAATCTG..................................................................................................................................................................................................................................... 16 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTAGGCGATAGCCATATCAGGCATT................................. 25 0 1 3.00 3 1 0 2 0 0 0 0 0 0 0
..............................................CAAGGTAAGCTCGCAAGAAGCCTT.................................................................................................................................................................................... 24 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TGTACACCTTATGGACCTGAACTAGG..................................................... 26 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.....TTTGTGGAAAAATCTGACGGA................................................................................................................................................................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATG............................................................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TATCAGGCATTATCGTACCGGTATA................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACTAGGCGATAGCCATATCAGGCAT.................................. 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGTAATCTGTACACCTTATGGACC.............................................................. 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCTGACGG................................................................................................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................GTTATATAACGAGTTCACTAAAT.............................................................................................................. 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................TAGTGCACTAATACATAAGAACATTGC......................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................ATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCCATATCAGGCATTATCGT............................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCCATATCAGGCATTATCGTACCGG....................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.....................................GAATTTGTTCAAGGTAAGCTCG............................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......TGTGGAAAAATCTGACG.................................................................................................................................................................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................TAATACATAAGAACATTGCATTAAAA.................................................................................................................................................. 26 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.........TGGAAAAATCTGACGGATTAATTCTA....................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GTACCGGTATAAGCTAAAGACATTCGT... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...........................................GTTCAAGGTAAGCTC................................................................................................................................................................................................ 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGGACACCTTATGGACCTGAAC......................................................... 26 1 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACA........ 21 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.....................................................................................TAAGAACATTGCATTAAAAATGA.............................................................................................................................................. 23 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTATATGTAATCTGTACACCTTATGGACC.............................................................. 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
....................................AGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAA................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAA............ 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TAGCCATATCAGGCATTATCGT............................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TACACCTTATGGACCTGAACTAGGC.................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................................ATTTGTTCAAGGTAAGCTCGCAAGAAGC....................................................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TATAAGCTAAAGACATTCGTA.. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACG.......................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGCTCAAGGTAAGCTC................................................................................................................................................................................................ 25 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GACCTGAACTAGGCGAT................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTGCTTATCTATATAGGTA............................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATGACAA........................................................................................................................................... 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ACCGGTATAAGCTAAAGACATTCGT... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTCG.... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TATCAGGCATTATCGTACCGGTA..................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ACCTTATGGACCTGAACTAGGCGATA................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTATGGAC............................................................... 20 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
........................................................................................................................ATATAACGAGTTCACTAA................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................AAGAAGCCTTTAGTGCA............................................................................................................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTA.............. 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCCATATCAGGCATTATCGTACCGGT...................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................TGGAGAATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................................................................................................................AAGGTTATATAACGAG........................................................................................................................ 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCTAAAGACATTCGTA.. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.TAGCTTTGTGGAAAAATCTGAC................................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................ATCTGACGGATTAATTC......................................................................................................................................................................................................................... 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................TAAATTGCTTATCTATATAGGTATT.......................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCG..................................................................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............AAATCTGACGGATTAATTCTAGAGAATT................................................................................................................................................................................................................ 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..........................................................................GCACTAATACATAAGAACA............................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTG..................................................................................................................................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCC..................................................................................................................................................................................... 28 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................TATATAACGAGTTCACTAAA............................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............................................................AGAAGCCTTTAGTGCA............................................................................................................................................................................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCCATATCAGGCATTATCG............................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................TCTGACGGATTAATTCTAGAGAAT................................................................................................................................................................................................................. 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCGGGCATTATCG............................. 28 1 1 2.00 2 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................TGCTTATCTATATAGGTATTTATATGT................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TATGGACCTGAACTAGGCGA.................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACACCTTATGGACCTGAACTAGGCGA.................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......TGTGGAAAAATCTGAC................................................................................................................................................................................................................................... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................TTAATTCTAGAGAAT................................................................................................................................................................................................................. 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................TTAAGGTTATATAACGAGT....................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATGACAAA.......................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
................................................................................................................TTAAGGTTATATAACGAG........................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TCGTACCGGTATAAGCTAAAGACATTC..... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.................................................................................................................TAAGGTTATATAACGAGTTCA.................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................TCTAGAGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAAT........................................................................................................................................................................................................................... 18 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
......................................AATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................ATGTAATCTGTACACCTTATGGACC.............................................................. 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGACGGATTAAT........................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................TTTGTTCAAGGGAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 29 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................TATATAACGAGTTCACT.................................................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................GTTATATAACGAGTTCACTAA................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................ATAACGAGTTCACTAAAT.............................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................TTAAGGTTATATAACGAGTTCACTAA................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGCTAAAGACATTC..... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...........................TAATTCTAGAGAATTTG.............................................................................................................................................................................................................. 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATCGTACCGGTATAAGC................ 17 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
............................................................AAGAAGCCTTTAGTGC.............................................................................................................................................................................. 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................TCGAGAATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 27 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAATTC......................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACATTC..... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
..............AAATCTGACGGATTAATTCTAGAGA................................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.....................................GAATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
......................................AATTTGTTCAAGGTAAGC.................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................CTAGGCGATAGCCATATCAGGCATTA................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCA.......................................................................................................................................................................................................... 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................ATATGTAATCTGTACACCT...................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TATGCGATAGCCATATCAGGCATTATCG............................. 28 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....CTTTGTGGAAAAATCTGAC................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AGCTAAAGACATTCGTATT 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....TTCGTGGAAAAATCTGACGGA................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............AAAATCTGACGGATTAATTCTAGAGAAT................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACATCTTATGGACCTGAAC......................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................GTTATATAACGAGTTCA.................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......TTGTGGAAAAATCTGAC................................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................CACTAATACATAAGAACATTG.......................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...GCTTTGTGGGAAAATCTGAC................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATCAT............................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCGCAAGGAGCCT..................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................AAATTGCTTATCTATATAGG.............................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................TCTAGAGAATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CAAGCTAAAGACATTCGTA.. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................AGAGAATTTGTTCAAGGTAAGCT................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TTATATGTAATCTGTACACCTTATGG................................................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................TTGTTCAAGGAAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTCCC.............................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TATCAGGCATTATCGTACCGGT...................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACACCTTATGGACCTGAACTAGGCGATA................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TATGGACCTGAACTAGGCGATAGC.............................................. 24 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................TTATATGTAATCTGTACACCT...................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GGACCTGAACTAGGCGATAGCCATA.......................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................TAGAAAATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................TTAAGGTTATATAACGAGTTCACTAAAT.............................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................TAAAGACATTCGTATT 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................TATAGCGAGTTCACTGAATTGGT.......................................................................................................... 23 3 2 1.00 2 0 0 0 0 0 0 0 0 0 2
.......................................................................................................................................................................AATCTGTACACCTTATCGACCTGAAC......................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................TAATTCTAGAGAATTTGTTCAAAATT..................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......TGTGGAAAAATCTGACGGATTAAT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AATCTGTACACCTTA.................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................TAGAGGATTTGTTCAAGGTAAGCTC................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...GCTTTGTGGAAAAATCTGACGGA................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TATCAGGCATTATCGTAC.......................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGTAATCTGTACACCTTATGGACCTGAA.......................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................TTTGTTCAATGTAAGCTCGCAAGAAGCCT..................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................ATAAGAACATTGCATTAAAAATGACA............................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................TGTTCAAGGTAAGCTCTCAAGAAGCCT..................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................GAATTTGTTCAAGGGAAGCTCGC.............................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................TTAAGGTTATATAACGAGTTCACT.................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TCGTACCGGTATAAGCTAAAGACATTCG.... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................TAGAGAATTTGTTCAAGGTAAGCTA................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCAGGCATTATCGTACCGG....................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACCCCTCATGGACCTGAACTAGGCGAT................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................TTCTAGAGAATTTGTTCAAGGCAAG................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACTAGGCGATAGCCATATCAGGC.................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TGAACTAGGCGATAGCCATATCAGG..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........TGGAAAAATCTGACGGATTAATTTTAT...................................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................TAGATAATTTGTTCAAGGTAAGCTCGC.............................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AGGCATTATCGTACCGGTA..................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TATCGAAACACCTTTTTAGACTGCCTAATTAAGATCTCTTAAACAAGTTCCATTCGAGCGTTCTTCGGAAATCACGTGATTATGTATTCTTGTAACGTAATTTTTACTGTTTAATTCCAATATATTGCTCAAGTGATTTAACGAATAGATATATCCATAAATATACATTAGACATGTGGAATACCTGGACTTGATCCGCTATCGGTATAGTCCGTAATAGCATGGCCATATTCGATTTCTGTAAGCATAA
*********************************************************....(((......((.(((((......(((.....((((((........))))))....))).......))))).)))))*****************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
M053
female body
M025
embryo
SRR553486
Makindu_3 day-old ovaries
SRR553485
Chicharo_3 day-old ovaries
SRR902008
ovaries
SRR902009
testis
O001
Testis
O002
Head
SRR553487
NRT_0-2 hours eggs
GSM343915
embryo
M024
male body
SRR553488
RT_0-2 hours eggs
..................GACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 25 0 1 31.00 31 31 0 0 0 0 0 0 0 0 0 0 0 0
.................AGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 26 0 1 29.00 29 29 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCTTAAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 26 0 1 8.00 8 4 4 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................AATTTTTACTGTTTAATTCCAATAT............................................................................................................................... 25 0 1 6.00 6 1 5 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................GGAATACCTGGACTTG......................................................... 16 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................GGACTTGATCCGCTATCGGTATAGT....................................... 25 0 1 5.00 5 1 4 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTCAAGTGATTTAACGAATAGATAT.................................................................................................. 27 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTGCTCAAGTGATTTAACGAAT........................................................................................................ 23 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................GTTCTTCGGAAATCACG.............................................................................................................................................................................. 17 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TAATAGCATGGCCATATTCGATTTC........... 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
..............TTTAGACTGCCTAATTAAGATCTCTT.................................................................................................................................................................................................................. 26 0 1 4.00 4 0 0 0 3 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATAGCATGGCCATATTCGATTTC........... 24 0 1 4.00 4 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................CAAGTTCCATTCGAGCGTT............................................................................................................................................................................................ 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CCGTAATAGCATGGCCATATTCGAT.............. 25 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATATTGCTCAAGTGATTTAACGAAT........................................................................................................ 25 0 1 4.00 4 1 3 0 0 0 0 0 0 0 0 0 0 0
....................CTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 23 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...................ACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTAATAGCATGGCCATATTCGATTTC........... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TAGCATGGCCATATTCGATTTC........... 22 0 1 3.00 3 2 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................TCTTCGGAAATCACGTGATTATGTAT................................................................................................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACCTGGACTTGATCCGCTATCGGTAT.......................................... 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATAGCATGGCCATATTCGATTTC........... 23 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGCTCAAGTGATTTAACGAATAGATAT.................................................................................................. 28 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
..............TTTAGACTGCCTAATTAAGATCTCT................................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTAATAGCATGGCCATATT.................. 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATCCATAAATATACATTAGACATGT......................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................CAAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GTTCCATTCGAGCGT............................................................................................................................................................................................. 15 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................TGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................TTCCAATATATTGCTCAAGTGAT................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TATTGCTCAAGTGATTTAACGAAT........................................................................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................ACGTAATTTTTACTGTTTAATTCCAAT................................................................................................................................. 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................TGATTATGTATTCTTGTA............................................................................................................................................................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.....................................CTTAAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.............TTTTAGACTGCCTAATTAAGATCT..................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................AAATCACGTGATTATGTATTCTTGTA............................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CACGTGATTATGTATTCTT............................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCCATATTCGATTTC........... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGATCCGCTATCGGTATAGTCCGT................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TAATAGCATGGCCATATT.................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATGTGGAATACCTGGACTTGATCCGCT.................................................. 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............TTTTAGACTGCCTAATTAAGAT....................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................GCGTTCTTCGGAAATCACGTGATTAT....................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCTTAAACAAGTTCCATTCGAGCGTT............................................................................................................................................................................................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..............................................GTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GTCCGTAATAGCATGGCCATATT.................. 23 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................CTTAAACAAGTTCCATTCGAGCGTT............................................................................................................................................................................................ 25 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCCATATTCGATTTCTGTAAGCAT.. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TAACGAATAGATATATCCATA........................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................AAACAAGTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TTAATTCCAATATATTGCTCAAGTGAT................................................................................................................. 27 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................TTATTGCTCAAGTGATTTAACGAAT........................................................................................................ 25 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
.................AGACTGCCTAATTAAGATCTCTTAA................................................................................................................................................................................................................ 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AGATATATCCATAAATATACATTAGACATGT......................................................................... 31 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0 0 0
........................................AAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................TTAAGATCTCTTAAA............................................................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCGAGCGTTCTTCGGA..................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................CTCTTAAACAAGTTCCATTCGAGCGTT............................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCGAGCGTTCTTCGGAAATCACG.............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................TCTCTTAAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCTCAAGTGATTTAACGAATAGAT.................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTCAAGTGATTTAACGA.......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTTCGGAAATCACGTGATTAT....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTATGTATT.................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATATATTGCTCAAGTGATT................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................GCTCAAGTGATTTAACGAATA....................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
TATCGAAACACCTTTTTAG....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTA........................................................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTTCGGAAATCACGTGATTATGT..................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGATCCGCAATCGGTATAGTCCGT................................... 24 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................GAAATCACGTGATTAT....................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................AACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................AAGTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................TGCCTAATTAAGATCT..................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCGAGCGTTCTTCGG...................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCGAGCGTTCTTCGGAAATCACGTGAT.......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCACGTGATTATGTATTCTTGTAA........................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................TCAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................TTATGTATTCTTGTAACGT........................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TAAACAAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TATCGGTATAGTCCGTAATAGCATGGCCAT..................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CCGTAATAGCATGGCCATATTCGATTTC........... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAGACATGTGGAATACCTGGACTTGAT....................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TAACGAATAGATATAT................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TAATAGCATGGCCATAT................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................CCATTCGAGCGTTCTTCGGAAATCACGT............................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GATCCGCTATCGGTATAGTCCGTAAT................................ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................TTATGTATTCTTGTAA........................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TATATCCATAAATATACATTAGACATGT......................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................GTTCTTCGGAAATCACGTGATTATGT..................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................ATTGCTCAAGTGATTTA.............................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................TAAACAAGTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................TCGGAAATCACGTGATTATGTAT................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTAATAGCATGGCCATAT................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................AGATATATCCATAAATATACATTAGACAT........................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...................ACTGCCTAATTAAGATCTCT................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................AATATACATTAGACATGT......................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................GGAAATCACGTGATTATGAA.................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................TTACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................TAAGATCTCTTAAACAAGTTCCATT.................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGACTTGATCCGCTA................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GAGCGTTCTTCGGAAATCACGTGAT.......................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CCAATATATTGCTCAAGTGAT................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................GAGCGTTCTTCGGAAAT.................................................................................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACTGTTTAATTCCAATAT............................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATAGTCCGTAATAGCATGGCCATAT................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTATGTAT................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATAGCATGGCCATA.................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................TAAGTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................CGAATAGATATATCCATAAATATACAT.................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................AATTCCAATATATTGCTCAAGTGAT................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................TAGACTGCCTAATTAAGATCTCT................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................AAGTTCCATTCGAGCGTTCTTCGGA..................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
TATCGAGACACCTTTATAG....................................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................TTAAACAAGTTCCATTCGAGCGTT............................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TCCGTAATAGCATGGCCATATTCGATTTC........... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................TCGAGCGTTCTTCGGAAATCA................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................AGACTGCCTAATTAAGATCTCTTA................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATCGGTATAGTCCGTAATAGCATGGCCAT..................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................AATTTTTACTGTTTAATTCCAATATAT............................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATAGCATGGCCATATTCGATTTCT.......... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGCTCAAGTGATTTAACGAAT........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTAATAGCATGGCCATATTCGATTTC........... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................GTTCCATTCGAGCGTT............................................................................................................................................................................................ 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAATATACATTAGACATGTGGAATAC.................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................TCGGAAATCACGTGATTATGTATTCT................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TAATAGCATGGCCATATTCGAT.............. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................CGAGCGTTCTTCGGAAATCACGTGAT.......................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TTAACGAATAGATATA................................................................................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............CTAGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................CGTAATAGCATGGCCATATT.................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAATATACATTAGACATGT......................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................TTCCAATATATTGCTCAAGTGATTT............................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................ATATATTGCTCAAGTGGT................................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................TCAAGTGATTTAACGAATAGATATAT................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................TTAAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................TGGAATACCTGGACTTGATCCGCTAT................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTCAAGTGATTTAACGAATAG...................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................TGTTTAATTCCAATAT............................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TGATTTAACGAATAGAT.................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCTTCGGAAATCACGTGATTATGTATT.................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................GGAATCACGTGATTATGTAT................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................AGACTGCCCAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................CTTCGGAAATCACGTGATTATGTATT.................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TAGTGGACTTGATCCGCTATCGGTA........................................... 25 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCATGGCCATATTCGATTTCTGTAAGCAT.. 30 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................TTAAGATCTCTTAAACAAGTTCCAT..................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CCGTAATAGCATGGCCATATT.................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TATAGTCCGTAATAGCATGGCCATAT................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................GGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................ACAAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CAAGTTCCATTCGAGC............................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCTGGACTTGATCCGCTATCGGTATAGT....................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TATCGGTATAGTCCGTAATAGCTT........................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AAAAAAATGCTCAAGTGATTTAACGAA......................................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..TCGAAACACCTTTTTAGA...................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCACGCGATTATGTATTCTTGTA............................................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................ATTTTTACTGTTTAATTCCAATAT............................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCATGGCCATATTCGATTTC........... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATATTGCTCAAGTGATTTAACGA.......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................ACTGCCTAATTAAGATCTCTT.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCATGGCCATATTCGATTTC........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................AAACAAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................ATAGCATGGCCATATT.................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................AAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCCAATATATTGCTCAAGTGA.................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................AATTCCAATATATTGCTCAAGTGATT................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACTCAAGTGATTTAACGAATAGAT.................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGACTTGATCCGCTATCGGT............................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGGTATAGTCCGTAATAGCATGGCCAT..................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TTTAGACTGCCTAATTAAGATCTC.................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................TCGAGCGTTCTTCGG...................................................................................................................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGGCCATATTCGATTTC........... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
TATCGAAACACCTTTTTAGACTGC.................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................AAATTAAGATCTCTTAAACAAGTTCC....................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CCGTAATAGCATGGCCATA.................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................CCAATATATTGCTCAAGTGATTTAACG........................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AATAGCATGGCCATATTCGATTT............ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTATGTA.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................TCTTCGGAAATCACGTGA........................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................TCCAATATATTGCTCAAGTGATTTA.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGATCCGCTATCGGTAT.......................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................ATCCATAAATATACATTAGACATG.......................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TAGACATGTGGAATACCTGGACTT.......................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................CAAGTGATTTAACGAATAGAT.................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................TTAAACAAGTTCCATTCGAGCGTTCT.......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTCAAGTGATTTAACGAATAGAT.................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
TATCGAAACACCTTTTTAGACT.................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTATGTATTCTTGT............................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............TGCTGGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 30 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGGCCATATTCGATTTCTGTAAGCAT.. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................TAGTGATTTAACGAATAGATAT.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CACGTGATTATGTATTCTTGTAACGT........................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGACTTGATCCGCTAT................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................ACGTGATTATGTATTCTTGTAA........................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CACATTGCTCAAGTGATTTAACGA.......................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................AGTTCCATTCGAGCGTT............................................................................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................TTCCATTCGAGCGTTCTTCGGAAAT.................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................CTGCCTAATTAAGATCTCTTAAACA............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................TCACGTGATTATGTATTCTTGTAACGTAA...................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............TTTTAGACTGCCTAATTA........................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................AAGGAATACCTGGACTTGAT....................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................AGCATGGCCATATTCGATTTCTGT........ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
.................AGACTGCCTAATTAAGATCTC.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............TTTTAGACTGCCTAATTAAGATCTC.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................CTGCCTAATTAAGATCT..................................................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................AATATATTGCTCAAGTGATTT............................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................CTGTTTAATTCCAATAT............................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATATTGCTCAAGTGATTTAA............................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATAGTCCGTAATAGCATGG......................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CAAGTTCCATTCGAGCG.............................................................................................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTGGACTTGATCCGCTATCGGTATAGT....................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................CAAGTTCCATTCGAGCGTTCTT......................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCCATATTCGCTTTCTGTAAGCAT.. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................TTCGAGCGTTCTTCGGAA.................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CAATAGCATGGCCATATT.................. 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.ATCGAAACACCTTTTTAGACTGCCT................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGGCCATATTCGATTTCTGTAAGCA... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................CGGAAATCACGTGATTATGTATTCTT............................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................GTTCTTCGGAAATCA................................................................................................................................................................................ 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............TTTAGACTGCCTAATTAAGATCT..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................CTAATTAAGATCTCTTAAACAAGTTC........................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATAGTCCGTAATAGCATGGCCATATT.................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................TCGGAAATCACGTGATTATGTATT.................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GAATACCTGGACTTGATCCGCTATCGGT............................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TTAGACTGCCTAATTAAGATCTCTT.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................ATATATTGCTCAAGTGAT................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................CACGTGATTATGTATTCTTGTAA........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................TTGCTCAAGTGATTTAA............................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................TCTTAAACAAGTTCCATTCGAGCGT............................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...............TGCGACTGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GGCCATATTCGGTTTC........... 16 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TTTAACGAATAGATATA................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................GTTTAATTCCAATATATTGCTCAAGT.................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTGGACTTGATCCGCTATCGGTAT.......................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................GAATGCCTAATTAAGATCTCTTAAA............................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGCTCAAGTGATTTA.............................................................................................................. 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................AGTGATTTAACGAAT........................................................................................................ 15 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................AAGATCTCTAAGACAAGTT......................................................................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................GTCGGAAATGACGTGATGA........................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................TGAGGAATCCCTGGACTG.......................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:15840-16089 - dsi_1364 ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGCAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTA---------AAAATGACAAATTAAGGTTATATAACGAGTTCACTAAATTGCTTATC--TATATAGGTATT----TATATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTAGGCGATAGCCATATCAGGCATTAT-------------------------------CGTACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------TATT
droSec2 scaffold_14:29607-29856 - ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGCAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTA---------AAAATGACAAATTAAGGTTATATAACGAGTTCACTAAATTGCTTATC--TATATAGGTATT----TATATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTAGGCGATAGCCATATCAGGCATTAT-------------------------------CGTACCCGTATAAGCTAAAGACA----T------------------------------------TC----G------TATT
dm3 chr2L:24537-24796 - ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGAAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTT---------AAAATATCAAACTAAGGTTATATAATGAGTTCACTACATTTTTTATC--AATATAGGTATT----TACATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTGGGCGATAGCCATATCAGGCCATAT-------------------------------CGTATCCGTATAAGCAACAGACA----T------------------------------------TCGTTAGTAATCGTGTT
droEre2 scaffold_4929:50617-50869 - ATAGCTTTGTGGAAAAATCTGACGGATTGATTTTGGAGAATTTGTTCAAGGTAAGTTCGAAAGACGACTTTAGTGCACTAATATGTAACAACATTTCTTTA---------AAAATGTTAAATTAATAAATTTTAACGAGTTGACTGATTTGTTTATC--TACATACATAAG----TA----TAAAAGGTAG--------------------ACCAAATTTATTTTAATTGTGATAAAGT----------------------------TGCAGTGTTAGTAACATTAGTACTGGTCAAAGTTAAGTTCATTCCG------------------------------------TT----G------TAAA
droYak3 2L:19191-19331 - ATAGCTTTGTGGAAAAGTCTGACGGATTGATTTTAGAGAATTTGTTTAAGGTAAGTTTAAAACACGACTG---TACACTAAT----------------TTA---------AAAATGTTAAATTAAGGTAATATAACGAGTTGTCGGAATTGATGGTC--TACATAAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droEug1 scf7180000409154:21267-21361 - ACAGTTATGTGGAAAAATCCGATGGACTTATTCTTGAGAATTTATTTAGGGTAAGTTTACTAAAACACATTAATTTACTAATAATCTATAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droBia1 scf7180000301455:29267-29367 - ACAGTTTTGTGGAAAAATCCGATGGGCTGATTCTCGAGAATTTATTTAAGGTAAGTTTATTAT----------------------------------ATCA---------AAAAC-----------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------------TAGCGACAGCATTAGCATTTAAAAT--------------------------GA
droTak1 scf7180000414212:6663-6767 + AGGAAT------------------------------------TGTCCACAATAAATATATATATATAGTTAGATGAACCAATTCTTATGAAGTTTGAATTGAAAATGACAAATAT------TATAAACATATTTATGAATTCACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droEle1 scf7180000490607:1406-1544 + GACAAG-------------------------------------------------------------------------------------------------------------------CTAGGACCTTTTACAGGGTTTATT---TTGTTTTCC--TGTATAATTGTT----TGTGTTAA----------------TTATTGATTTACATTACATTGATTTGAACATAATAGT-----------------------------------------------------------------------------AAACCAGAACTATACCAGTTACCCAGCTAATTAATTTC----G------TGGG
droRho1 scf7180000779252:106229-106315 + ACAGTTTTGTGGAAAAATCAGATGGACTGATTCTTGAAAATTTGTTCAAGGTAAGATCGGTAGATGAACAT-ATACATTAATTCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droFic1 scf7180000453515:4546-4631 - GAGTATTACA----------------------------------------------------------------------------------------TTA---------AAAATTACGACTCAGGCGTATATTTCTAGTTTTTTACACTACTCGGATTTCTATATGAATC----TGCTTATTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droKik1 scf7180000302266:236681-236751 + TTTGGTACATTTATACAT--------------------------------------------------------------------GAAACAGGCGCTTTA---------AAGATGATAAATAGAGCCTTAAAGACCATTTCACTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droAna3 scaffold_13082:2974792-2974875 + TTAAAAA----------------------------------------------------------------------------------------------------------AAATTATTCTTAGGTTATGGAAAAAAATAAATTAATTGTATATC--CATATATATATA----TATATATA-----TAT--------------------ATCTCGT-------------------------------------------------------------------------------------------------------------------------------------------------GGA
droBip1 scf7180000391670:31137-31212 + ATAAAT--------------------------------------------------------------------------------AAGAACCCAGTTTCA---------TATACAGCAAATTAAAGATTTATAACGTTTTAATTTA-------ATC--CAATTTGGTATT----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
dp5 4_group2:122139-122214 + ATGCTTTTGTGGAAAAATCGGATGGACTCGTGTTGGAGACTCTATTCAAGGTAAGTTCGTAAA-AGTGTCAAATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droPer2 scaffold_8:3772565-3772640 - ATGCTTTTGTGGAAAAATCGGATGGACTCGTGTTGGAGACTCTATTCAAGGTAAGTTCGTAAA-AGTGTCAAATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droWil2 scf2_1100000004513:1691189-1691328 + AATTATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------ACATACATGTA----CATATATATTCCACTTAACATTTGG---------------GCTTGAATGAAACTAAGTGATAGCTTTTTTAAATTTTATTATTTTATACCCTTGCAGTATCTGTGAAA---------CTTTTTAAGAAAAACA----G------------------------------------TT----T------TATG
droVir3 scaffold_12970:7660848-7660938 + ACAGGCAGGTGGCCAAATCAAAGGGCCAACTGTTGGAGACGCTCCTTAAGGCGAGTACTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TG----------GC-----------------------------------------------------------------------------AAGTGGCAGCTCTAGAG-------------------TC----T------TAAT
droMoj3 scaffold_6332:86216-86318 + TATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATAC-CGTTTCCATTAGTACTAGG---------------CACTGATCTGCACTAAATGCTCGCCATAGCAATAATAAA-------------------------------GGAACACTT-------------------------------GCTT--------------------GG----T------TATA
droGri2 scaffold_15203:11321523-11321585 - ATAGCAATGTGGCCGAGTCAAAGGGTCAGATATTGGAAACGCTCTTCAAGGTGAGCACTCAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGCAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTA---------AAAATGACAAATTAAGGTTATATAACGAGTTCACTAAATTGCTTATC--TATATAGGTATT----TATATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTAGGCGATAGCCATATCAGGCATTAT-------------------------------CGTACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------TATTSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCT.........................................................................................................................................................................................................................................................................................................291373.003731136740000000000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTGAAC..........................................................................................................................................261155.001550066777000005000000
.................................TAGAGAATTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................251139.0013900200000000119000000
.................................TAGAGAATTTGTTCAAGGTAAGCTCGC..................................................................................................................................................................................................................................................................................................................271125.001250101000000123000000
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCT.........................................................................................................................................................................................................................................................................................................27193.0093009110000001000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTAT-------------------------------CG...............................................................................28161.00610002200000038100000
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCT.........................................................................................................................................................................................................................................................................................................28160.0060005820000000000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----G------T...18157.0057000000000057000000
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCC..........................................................................................................................................................................................................................................................................................................28146.00460033110000001100000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTAT-------------------------------C................................................................................27146.0046000100000044100000
.................................TAGAGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................24144.0044000000000044000000
...................TGACGGATTAATTCTAGAGAATTTGT.................................................................................................................................................................................................................................................................................................................................26142.0042001000000039200000
.................................TAGAGAATTTGTTCAAGGTAAGC......................................................................................................................................................................................................................................................................................................................23136.0036000001000034100000
..........................................................................................................................TAAGGTTATATAACGAGTTCACTAAA..........................................................................................................................................................................................................................26132.0032000120000028100000
.............AAAATCTGACGGATTAATTCTAGAGA.......................................................................................................................................................................................................................................................................................................................................26129.00290113140000000100000
.................................TAGAGAATTTGTTCAAGGTAAGCTCG...................................................................................................................................................................................................................................................................................................................26128.0028000000000028000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTAT-------------------------------CGT..............................................................................29125.0025000000000025000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTGA............................................................................................................................................24125.0025015152000002000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTAT-------------------------------.................................................................................26123.0023000200000021000000
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCG.........................................................................................................................................................................................................................................................................................................29122.0022002200000000000000
.....................................................................................TAAGAACATTGCATTA---------AAAATGACAAAT....................................................................................................................................................................................................................................................28122.0022000140000008000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTGAA...........................................................................................................................................25121.0021009120000000000000
.....................................GAATTTGTTCAAGGTAAGCTCGC..................................................................................................................................................................................................................................................................................................................23121.0021000000000021000000
.......................................ATTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................19119.0019000000000019000000
..........................................................................................................................TAAGGTTATATAACGAGTTCACTAAAT.........................................................................................................................................................................................................................27118.0018003000000015000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------TA..27118.0018000000000018000000
...................TGACGGATTAATTCTAGAGAATTTGTT................................................................................................................................................................................................................................................................................................................................27117.0017000100000016000000
.................................TAGAGAATTTGTTCAAGG...........................................................................................................................................................................................................................................................................................................................18115.0015000000000015000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------T...26115.0015000000000015000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTGAACTA........................................................................................................................................28115.0015003110000001000000
..........................TTAATTCTAGAGAATTTGTTCAAGGTA.........................................................................................................................................................................................................................................................................................................................27115.0015000000000015000000
..........................................................................................................................TAAGGTTATATAACGAG...................................................................................................................................................................................................................................17114.0014000000000014000000
..........................................................................................................................TAAGGTTATATAACGAGTTCACTAA...........................................................................................................................................................................................................................25114.0014000000000014000000
..............................TTCTAGAGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................27114.0014000100000013000000
.......................................ATTTGTTCAAGGTAAGCTCGC..................................................................................................................................................................................................................................................................................................................21114.0014000000000014000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----G------TA..19114.0014000000000014000000
.............AAAATCTGACGGATTAATTCTAGAGAA......................................................................................................................................................................................................................................................................................................................................27113.001300490000000000000
.................................TAGAGAATTTGTTCAAGGT..........................................................................................................................................................................................................................................................................................................................19113.0013000000000013000000
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCCC.........................................................................................................................................................................................................................................................................................................29113.0013001300000000000000
.........TGGAAAAATCTGACGGATTAATT..............................................................................................................................................................................................................................................................................................................................................23112.0012000000000012000000
...........................TAATTCTAGAGAATTTGTTCAAGGTA.........................................................................................................................................................................................................................................................................................................................26112.0012000100000011000000
..............................TTCTAGAGAATTTGTTCAAGGTAAGC......................................................................................................................................................................................................................................................................................................................26112.0012000100000011000000
..........................................................................................................................TAAGGTTATATAACGA....................................................................................................................................................................................................................................16112.0012000000000012000000
.................TCTGACGGATTAATTCTAGAGAATT....................................................................................................................................................................................................................................................................................................................................25111.001100210010007000000
.............AAAATCTGACGGATTAATTCTAGA.........................................................................................................................................................................................................................................................................................................................................24111.001100452000000000000
.TAGCTTTGTGGAAAAATCTGACGGA....................................................................................................................................................................................................................................................................................................................................................25110.001000210000007000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATTA.................................................................................................................25110.0010000000000010000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----G------TATT2119.00900000000009000000
..........................................................................................................................TAAGGTTATATAACGAGTTCACTA............................................................................................................................................................................................................................2419.00900000000009000000
....................................................................................ATAAGAACATTGCATTA---------AAAATGAC........................................................................................................................................................................................................................................................2519.00900100000008000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCAT...................................................................................................................2318.00800000000008000000
.TAGCTTTGTGGAAAAATCTGACGGAT...................................................................................................................................................................................................................................................................................................................................................2618.00800430000001000000
.........TGGAAAAATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................2418.00800000000008000000
....................................................................................................................................................................................................................................TAGGCGATAGCCATATCAGGCATT..................................................................................................................2418.00800010000007000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTGAACT.........................................................................................................................................2718.00800710000000000000
...GCTTTGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................2118.00800000000008000000
.......................................................................................................................................................................................ATCTGTAC--------------------ACCTTATGGACCTGAAC..........................................................................................................................................2518.00800260000000000000
..........................................................................................................................TAAGGTTATATAACGAGTTCACT.............................................................................................................................................................................................................................2317.00700000000007000000
.........................................................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCATA...........................................................................................................................2617.00700230010001000000
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCC..........................................................................................................................................................................................................................................................................................................2717.00700430000000000000
..............................................................................................................................................................................................C--------------------ACCTTATGGACCTGAACTAGGCGAT..................................................................................................................................2617.00700000000007000000
..................................................................................................................TGACAAATTAAGGTTATATAACGAGT..................................................................................................................................................................................................................................2617.00700030000004000000
...................................................TAAGCTCGCAAGAAGCCTTTAGTGCAC................................................................................................................................................................................................................................................................................................2717.00700030000004000000
..........................................................................................................................TAAGGTTATATAACGAGT..................................................................................................................................................................................................................................1817.00700000000007000000
......TTGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................1817.00700000000007000000
.................................................................................................................................ATATAACGAGTTCACTAAA..........................................................................................................................................................................................................................1917.00700000000007000000
.................................TAGAGAATTTGTTCAAGGTAAG.......................................................................................................................................................................................................................................................................................................................2217.00700000000007000000
..........................................................................................................................TAAGGTTATATAACGAGTTCAC..............................................................................................................................................................................................................................2217.00700000000007000000
......TTGTGGAAAAATCTGACGG.....................................................................................................................................................................................................................................................................................................................................................1916.00600000000006000000
.......TGTGGAAAAATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................2616.00600100000005000000
.................................TAGAGAATTTGTTCAAGGTAAGCTCGCA.................................................................................................................................................................................................................................................................................................................2816.00600020000004000000
...................................................................................................................................................................................TGTAATCTGTAC--------------------ACCTTATGGACCTGAAC..........................................................................................................................................2916.00600510000000000000
...............................................................................................................................................................................TATATGTAATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2816.00600600000000000000
........................................................................................................................................................................................TCTGTAC--------------------ACCTTATGGACCTGAAC..........................................................................................................................................2416.00600510000000000000
.............AAAATCTGACGGATTAATTCTAGAG........................................................................................................................................................................................................................................................................................................................................2516.00600150000000000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCT..............................................................................................................................................2216.00600401100000000000
...................................................................................................................................................................................................................ACCTTATGGACCTGAACTAGGCGAT..................................................................................................................................2515.00500000000005000000
...GCTTTGTGGAAAAATCTG.........................................................................................................................................................................................................................................................................................................................................................1815.00500000000005000000
..........................TTAATTCTAGAGAATTTGTTCAAGGT..........................................................................................................................................................................................................................................................................................................................2615.00500000000005000000
..............................................................................TAATACATAAGAACATTGCATTA---------AAAA............................................................................................................................................................................................................................................................2715.00500230000000000000
..................................................................................................................TGACAAATTAAGGTTATATAACGAGTT.................................................................................................................................................................................................................................2715.00500500000000000000
......TTGTGGAAAAATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................2715.00500100000004000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACCTG.............................................................................................................................................2315.00500031000001000000
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCC..........................................................................................................................................................................................................................................................................................................2615.00500050000000000000
................................................................................................................................TATATAACGAGTTCACTAAATTGCT.....................................................................................................................................................................................................................2515.00500010000004000000
.................................................................................................................................................................................TATGTAATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2615.00500500000000000000
.................................TAGAGAATTTGTTCAAG............................................................................................................................................................................................................................................................................................................................1715.00500000000005000000
.................................TAGAGAATTTGTTCAAGGTAA........................................................................................................................................................................................................................................................................................................................2115.00500000000005000000
............................................................................................................................................................................................TAC--------------------ACCTTATGGACCTGAACTAGGCGAT..................................................................................................................................2815.00500210000002000000
.........................................................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCATATC.........................................................................................................................2815.00500500000000000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2115.00500201000002000000
..........................................................................................................................TAAGGTTATATAACGAGTT.................................................................................................................................................................................................................................1915.00500000000005000000
............................AATTCTAGAGAATTTGTT................................................................................................................................................................................................................................................................................................................................1815.00500000000005000000
..........................................TGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................1615.00500000000005000000
.............................................................................................................................................................................................AC--------------------ACCTTATGGACCTGAACTAGGCGAT..................................................................................................................................2714.00400100000003000000
.................................TAGAGAATTTGTTCAAGGTA.........................................................................................................................................................................................................................................................................................................................2014.00400000000004000000
...................TGACGGATTAATTCTAGAGAATTTG..................................................................................................................................................................................................................................................................................................................................2514.00400000000004000000
.....TTTGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................1914.00400000000004000000
...........................TAATTCTAGAGAATTTGTTCAAGGT..........................................................................................................................................................................................................................................................................................................................2514.00400000000004000000
...GCTTTGTGGAAAAATCTGA........................................................................................................................................................................................................................................................................................................................................................1914.00400000000004000000
..........................TTAATTCTAGAGAATT....................................................................................................................................................................................................................................................................................................................................1614.00400000000004000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----G------TAT.2014.00400000000004000000
.................................................................................TACATAAGAACATTGCATTA---------AAAA............................................................................................................................................................................................................................................................2414.00400300000001000000
.......................................................................................................................................................................................................................TATGGACCTGAACTAGGCGATAGCCA.............................................................................................................................2614.00400300000001000000
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCG.........................................................................................................................................................................................................................................................................................................2814.00400400000000000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAAG.............................................................1814.00400000000004000000
....................................................................................................................................................................................................................................................................................................GTATAAGCTAAAGACA----T------------------------------------TC----G------T...2114.00400000000004000000
.........................................TTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................1714.00400000000004000000
...........................................................................................................................................................................................................................................TAGCCATATCAGGCATTAT-------------------------------CGTAC............................................................................2414.00400000000004000000
.TAGCTTTGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................2314.00400000000004000000
.TAGCTTTGTGGAAAAATCTGACGG.....................................................................................................................................................................................................................................................................................................................................................2414.00400000000004000000
.......................................ATTTGTTCAAGGTAAGC......................................................................................................................................................................................................................................................................................................................1714.00400000000004000000
...................................................................................................................................................................................................................................................TCAGGCATTAT-------------------------------CGTACCGGTA.......................................................................2114.00400000000004000000
....................................................................................ATAAGAACATTGCATTA---------AAA.............................................................................................................................................................................................................................................................2014.00400000000004000000
..................................................................................................................................TATAACGAGTTCACTAAA..........................................................................................................................................................................................................................1814.00400000000004000000
.............................................................AGAAGCCTTTAGTGCACT...............................................................................................................................................................................................................................................................................................1814.00400000000004000000
.....................................................................................TAAGAACATTGCATTA---------AAAATGACAAA.....................................................................................................................................................................................................................................................2714.00400120000001000000
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCTT........................................................................................................................................................................................................................................................................................................2814.00400040000000000000
..............................................CAAGGTAAGCTCGCAAGAAGCCTTT.......................................................................................................................................................................................................................................................................................................2514.00400010000003000000
................................................................................................................................................................................................................................................................................................ACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------TA..2614.00400000000004000000
...GCTTTGTGGAAAAATCT..........................................................................................................................................................................................................................................................................................................................................................1713.00300000000003000000
.....................................................................................TAAGAACATTGCATTA---------AAAATGACA.......................................................................................................................................................................................................................................................2513.00300000000003000000
...................................................................................................................................................................TAGGTATT----TATATGTAATCTGTAC--------------------ACC........................................................................................................................................................2713.00300300000000000000
.............AAAATCTGACGGATTAATTCTAGAGAATT....................................................................................................................................................................................................................................................................................................................................2913.00300030000000000000
............................................TTCAAGGTAAGCTCGCAAGAAGCCTT........................................................................................................................................................................................................................................................................................................2613.00300010000002000000
............................................................AAGAAGCCTTTAGTGCACTAATACA.........................................................................................................................................................................................................................................................................................2513.00300000000003000000
........................GATTAATTCTAGAGAATTTGT.................................................................................................................................................................................................................................................................................................................................2113.00300000000003000000
...........................................................................................................................................................................................................................................TAGCCATATCAGGCATTAT-------------------------------CGTACCGG.........................................................................2713.00300020000001000000
.....................................................................................................................................................................................................................................................................................................TATAAGCTAAAGACA----T------------------------------------TC----G------T...2013.00300000000003000000
........................................TTTGTTCAAGGTAAGCTCGCAAGAAGCA..........................................................................................................................................................................................................................................................................................................2813.00300300000000000000
.....................................GAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................2013.00300000000003000000
.........................................................................TGCACTAATACATAAGAACATTGCATT..........................................................................................................................................................................................................................................................................2713.00300010000002000000
.....................................................................................................................................................TGCTTATC--TATATAGGT......................................................................................................................................................................................................1713.00300000000003000000
....................................................................................ATAAGAACATTGCATTA---------AAAA............................................................................................................................................................................................................................................................2113.00300000000003000000
....................................................................................................................................................TTGCTTATC--TATATAGGT......................................................................................................................................................................................................1813.00300000000003000000
.....................................................AGCTCGCAAGAAGCCTTTAGTGCAC................................................................................................................................................................................................................................................................................................2513.00300000000003000000
...................................GAGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................2213.00300000000003000000
......................................................................................................................................................................................................................TTATGGACCTGAACTAGGCGATAGCC..............................................................................................................................2613.00300300000000000000
....................................................................................ATAAGAACATTGCATTA---------AAAATGACAAAT....................................................................................................................................................................................................................................................2913.00300000000003000000
.............................................................AGAAGCCTTTAGTGCACTAATACATA.......................................................................................................................................................................................................................................................................................2613.00300000000003000000
..................................AGAGAATTTGTTCAAGGTAAGCTCT...................................................................................................................................................................................................................................................................................................................2513.00300000000003000000
..........................................TGTTCAAGGTAAGCTCGC..................................................................................................................................................................................................................................................................................................................1813.00300000000003000000
...............AATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................1813.00300000000003000000
....CTTTGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................2013.00300000000003000000
............................AATTCTAGAGAATTTGT.................................................................................................................................................................................................................................................................................................................................1713.00300000000003000000
...........................................................................................................................................................................................................................................TAGCCATATCAGGCATTAT-------------------------------CGTACC...........................................................................2513.00300300000000000000
........................................TTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................1813.00300000000003000000
.....TTTGTGGAAAAATCTGACGGATTAATT..............................................................................................................................................................................................................................................................................................................................................2713.00300000000003000000
...............................................AAGGTAAGCTCGCAAGAAGCC..........................................................................................................................................................................................................................................................................................................2113.00300000000003000000
...............................................................................................................................................................................................................................................CATATCAGGCATTAT-------------------------------CGTACCGGTA.......................................................................2513.00300100000002000000
.........TGGAAAAATCTGACGGATTAAT...............................................................................................................................................................................................................................................................................................................................................2213.00300000000003000000
.............................................TCAAGGTAAGCTCGCAAGAAGCCTT........................................................................................................................................................................................................................................................................................................2513.00300020000001000000
......TTGTGGAAAAATCTGA........................................................................................................................................................................................................................................................................................................................................................1613.00300000000003000000
..AGCTTTGTGGAAAAATCTG.........................................................................................................................................................................................................................................................................................................................................................1913.00300000000003000000
.........................................................................................................................................................................................................................TGGACCTGAACTAGGCGATAGCCAT............................................................................................................................2513.00300110000001000000
.....TTTGTGGAAAAATCTG.........................................................................................................................................................................................................................................................................................................................................................1613.00300000000003000000
...................................................................................................................................................................................................................................CTAGGCGATAGCCATATCAGGCATT..................................................................................................................2513.00300020000001000000
..............................................CAAGGTAAGCTCGCAAGAAGCCTT........................................................................................................................................................................................................................................................................................................2413.00300010000002000000
..........................................................................................................................................................................................TGTAC--------------------ACCTTATGGACCTGAACTAGG......................................................................................................................................2613.00300300000000000000
.....TTTGTGGAAAAATCTGACGGA....................................................................................................................................................................................................................................................................................................................................................2113.00300000000003000000
....................................................................................ATAAGAACATTGCATTA---------AAAATG..........................................................................................................................................................................................................................................................2313.00300000000003000000
.................................................................................................................................................................................................................................................TATCAGGCATTAT-------------------------------CGTACCGGTATA.....................................................................2513.00300000000003000000
..................................................................................................................................................................................................................................ACTAGGCGATAGCCATATCAGGCAT...................................................................................................................2513.00300000000003000000
...................................................................................................................................................................................TGTAATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2413.00300300000000000000
...GCTTTGTGGAAAAATCTGACGG.....................................................................................................................................................................................................................................................................................................................................................2213.00300000000003000000
..............................................................................................................................GTTATATAACGAGTTCACTAAAT.........................................................................................................................................................................................................................2313.00300000000003000000
......................................................................TAGTGCACTAATACATAAGAACATTGC.............................................................................................................................................................................................................................................................................2712.00200000000002000000
.......................................ATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................1812.00200000000002000000
............................................................................................................................................................................................................................................AGCCATATCAGGCATTAT-------------------------------CGT..............................................................................2112.00200000000002000000
............................................................................................................................................................................................................................................AGCCATATCAGGCATTAT-------------------------------CGTACCGG.........................................................................2612.00200100000001000000
.....................................GAATTTGTTCAAGGTAAGCTCG...................................................................................................................................................................................................................................................................................................................2212.00200000000002000000
.......TGTGGAAAAATCTGACG......................................................................................................................................................................................................................................................................................................................................................1712.00200000000002000000
..............................................................................TAATACATAAGAACATTGCATTA---------AAA.............................................................................................................................................................................................................................................................2612.00200110000000000000
.........TGGAAAAATCTGACGGATTAATTCTA...........................................................................................................................................................................................................................................................................................................................................2612.00200000000002000000
..............................................................................................................................................................................................................................................................................................GTACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------T...2712.00200200000000000000
...........................................GTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACA----......................................................2112.00200001000001000000
.....................................................................................TAAGAACATTGCATTA---------AAAATGA.........................................................................................................................................................................................................................................................2312.00200200000000000000
..........................................................................................................................................................................T----TATATGTAATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2912.00200200000000000000
....................................AGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................2112.00200000000002000000
....................................................................................ATAAGAACATTGCATTA---------AA..............................................................................................................................................................................................................................................................1912.00200000000002000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAA..............................................................1712.00200000000002000000
...........................................................................................................................................................................................................................................TAGCCATATCAGGCATTAT-------------------------------CGT..............................................................................2212.00200000000002000000
............................................................................................................................................................................................TAC--------------------ACCTTATGGACCTGAACTAGGC.....................................................................................................................................2512.00200100000001000000
.......................................ATTTGTTCAAGGTAAGCTCGCAAGAAGC...........................................................................................................................................................................................................................................................................................................2812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................TATAAGCTAAAGACA----T------------------------------------TC----G------TA..2112.00200000000002000000
..........................................................................................................................TAAGGTTATATAACG.....................................................................................................................................................................................................................................1512.00200000000002000000
...........................................................................................................................................................................................................................GACCTGAACTAGGCGAT..................................................................................................................................1712.00200000000002000000
....................................................................................................................................................TTGCTTATC--TATATAGGTA.....................................................................................................................................................................................................1912.00200000000002000000
....................................................................................ATAAGAACATTGCATTA---------AAAATGACAA......................................................................................................................................................................................................................................................2712.00200010000001000000
................................................................................................................................................................................................................................................................................................ACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------T...2512.00200000000002000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----G------....1712.00200000000002000000
.................................................................................................................................................................................................................................................TATCAGGCATTAT-------------------------------CGTACCGGTA.......................................................................2312.00200000000002000000
...................................................................................................................................................................................................................ACCTTATGGACCTGAACTAGGCGATA.................................................................................................................................2612.00200100000001000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTATGGAC................................................................................................................................................2012.00200200000000000000
.................................................................................................................................ATATAACGAGTTCACTAA...........................................................................................................................................................................................................................1812.00200000000002000000
............................................................AAGAAGCCTTTAGTGCA.................................................................................................................................................................................................................................................................................................1712.00200000000002000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTA................................................................1512.00200000000002000000
............................................................................................................................................................................................................................................AGCCATATCAGGCATTAT-------------------------------CGTACCGGT........................................................................2712.00200000000002000000
...........................................................................................................................AAGGTTATATAACGAG...................................................................................................................................................................................................................................1612.00200000000002000000
.........................................................................................................................................................................................................................................................................................................AGCTAAAGACA----T------------------------------------TC----G------TA..1712.00200000000002000000
.TAGCTTTGTGGAAAAATCTGAC.......................................................................................................................................................................................................................................................................................................................................................2212.00200000000002000000
................ATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................1712.00200000000002000000
................................................................................................................................................TAAATTGCTTATC--TATATAGGTATT----...............................................................................................................................................................................................2512.00200000000002000000
..........................................TGTTCAAGGTAAGCTCGCAAGAAGCCG.........................................................................................................................................................................................................................................................................................................2712.00200200000000000000
..............AAATCTGACGGATTAATTCTAGAGAATT....................................................................................................................................................................................................................................................................................................................................2812.00200020000000000000
..........................................................................GCACTAATACATAAGAACA.................................................................................................................................................................................................................................................................................1912.00200000000002000000
......TTGTGGAAAAATCTG.........................................................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
.........................................TTGTTCAAGGTAAGCTCGCAAGAAGCCC.........................................................................................................................................................................................................................................................................................................2812.00200200000000000000
................................................................................................................................TATATAACGAGTTCACTAAA..........................................................................................................................................................................................................................2012.00200000000002000000
.............................................................AGAAGCCTTTAGTGCA.................................................................................................................................................................................................................................................................................................1612.00200000000002000000
............................................................................................................................................................................................................................................AGCCATATCAGGCATTAT-------------------------------CG...............................................................................2012.00200000000002000000
.................TCTGACGGATTAATTCTAGAGAAT.....................................................................................................................................................................................................................................................................................................................................2412.00200100000001000000
.....................................................................................................................................................TGCTTATC--TATATAGGTATT----TATATGT........................................................................................................................................................................................2712.00200000000002000000
.......................................................................................................................................................................................................................TATGGACCTGAACTAGGCGA...................................................................................................................................2012.00200000000002000000
.............................................................................................................................................................................................AC--------------------ACCTTATGGACCTGAACTAGGCGA...................................................................................................................................2612.00200000000002000000
.......TGTGGAAAAATCTGAC.......................................................................................................................................................................................................................................................................................................................................................1612.00200000000002000000
..........................TTAATTCTAGAGAAT.....................................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
.........................................................................................................................TTAAGGTTATATAACGAGT..................................................................................................................................................................................................................................1912.00200000000002000000
....................................................................................ATAAGAACATTGCATTA---------AAAATGACAAA.....................................................................................................................................................................................................................................................2812.00200200000000000000
.........................................................................................................................TTAAGGTTATATAACGAG...................................................................................................................................................................................................................................1812.00200000000002000000
.............................................................................................................................................................................................................................................................T-------------------------------CGTACCGGTATAAGCTAAAGACA----T------------------------------------TC----...........2712.00200200000000000000
..........................................................................................................................TAAGGTTATATAACGAGTTCA...............................................................................................................................................................................................................................2112.00200000000002000000
...............................TCTAGAGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................2612.00200000000002000000
.............AAAATCTGACGGATTAAT...............................................................................................................................................................................................................................................................................................................................................1812.00200002000000000000
......................................AATTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................2012.00200000000002000000
..................................................................................................................................................................................ATGTAATCTGTAC--------------------ACCTTATGGACC...............................................................................................................................................2512.00200100000001000000
......TTGTGGAAAAATCTGACGGATTAAT...............................................................................................................................................................................................................................................................................................................................................2512.00200000000002000000
................................................................................................................................TATATAACGAGTTCACT.............................................................................................................................................................................................................................1712.00200000000002000000
..............................................................................................................................GTTATATAACGAGTTCACTAA...........................................................................................................................................................................................................................2112.00200000000002000000
...................................................................................................................................ATAACGAGTTCACTAAAT.........................................................................................................................................................................................................................1812.00200000000002000000
.........................................................................................................................TTAAGGTTATATAACGAGTTCACTAA...........................................................................................................................................................................................................................2612.00200100000001000000
.......................................................................................................................................................................................................................................................................................................TAAGCTAAAGACA----T------------------------------------TC----...........1612.00200000000002000000
...........................TAATTCTAGAGAATTTG..................................................................................................................................................................................................................................................................................................................................1712.00200000000002000000
............................................................................................................................................................................................................................................................AT-------------------------------CGTACCGGTATAAGC..................................................................1712.00200000000002000000
............................................................AAGAAGCCTTTAGTGC..................................................................................................................................................................................................................................................................................................1612.00200000000002000000
.............AAAATCTGACGGATTAATTC.............................................................................................................................................................................................................................................................................................................................................2012.00200001000001000000
...............................................................................................................................................................................................................................................................................................TACCGGTATAAGCTAAAGACA----T------------------------------------TC----...........2412.00200100000001000000
..............AAATCTGACGGATTAATTCTAGAGA.......................................................................................................................................................................................................................................................................................................................................2512.00200020000000000000
.....................................GAATTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................2112.00200000000002000000
......................................AATTTGTTCAAGGTAAGC......................................................................................................................................................................................................................................................................................................................1812.00200000000002000000
...................................................................................................................................................................................................................................CTAGGCGATAGCCATATCAGGCATTA.................................................................................................................2612.00200000000002000000
.................................TAGAGAATTTGTTCA..............................................................................................................................................................................................................................................................................................................................1512.00200000000002000000
................................................................................................................................................................................ATATGTAATCTGTAC--------------------ACCT.......................................................................................................................................................1911.00100100000000000000
....CTTTGTGGAAAAATCTGAC.......................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.........................................................................................................................................................................................................................................................................................................AGCTAAAGACA----T------------------------------------TC----G------TATT1911.00100000000001000000
.............AAAATCTGACGGATTAATTCTAGAGAAT.....................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..............................................................................................................................GTTATATAACGAGTTCA...............................................................................................................................................................................................................................1711.00100000000001000000
......TTGTGGAAAAATCTGAC.......................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
...........................................................................CACTAATACATAAGAACATTG..............................................................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................AAATTGCTTATC--TATATAGG.......................................................................................................................................................................................................2011.00100000000001000000
...............................TCTAGAGAATTTGTTCAAGGTAAGCTC....................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..................................AGAGAATTTGTTCAAGGTAAGCT.....................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
..........................................................................................................................................................................T----TATATGTAATCTGTAC--------------------ACCTTATGG..................................................................................................................................................2611.00100010000000000000
.................................................................................................................................................................................................................................................TATCAGGCATTAT-------------------------------CGTACCGGT........................................................................2211.00100000000001000000
.............................................................................................................................................................................................AC--------------------ACCTTATGGACCTGAACTAGGCGATA.................................................................................................................................2811.00100000000001000000
.......................................................................................................................................................................................................................TATGGACCTGAACTAGGCGATAGC...............................................................................................................................2411.00100000000000100000
..........................................................................................................................................................................T----TATATGTAATCTGTAC--------------------ACCT.......................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................................................................................................GGACCTGAACTAGGCGATAGCCATA...........................................................................................................................2511.00100010000000000000
.........................................................................................................................TTAAGGTTATATAACGAGTTCACTAAAT.........................................................................................................................................................................................................................2811.00100000000001000000
............................................................................................................................................................................................................................................................................................................TAAAGACA----T------------------------------------TC----G------TATT1611.00100000000001000000
.......TGTGGAAAAATCTGACGGATTAAT...............................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
......................................................................................................................................................................................AATCTGTAC--------------------ACCTTA.....................................................................................................................................................1511.00100000000001000000
...GCTTTGTGGAAAAATCTGACGGA....................................................................................................................................................................................................................................................................................................................................................2311.00100000000001000000
.................................................................................................................................................................................................................................................TATCAGGCATTAT-------------------------------CGTAC............................................................................1811.00100000000001000000
...................................................................................................................................................................................TGTAATCTGTAC--------------------ACCTTATGGACCTGAA...........................................................................................................................................2811.00100100000000000000
....................................................................................ATAAGAACATTGCATTA---------AAAATGACA.......................................................................................................................................................................................................................................................2611.00100000000001000000
.........................................................................................................................TTAAGGTTATATAACGAGTTCACT.............................................................................................................................................................................................................................2411.00100000000001000000
.............................................................................................................................................................................................................................................................T-------------------------------CGTACCGGTATAAGCTAAAGACA----T------------------------------------TC----G------....2811.00100001000000000000
.................................TAGAGAATTTGTTCAAGGTAAGCTA....................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...................................................................................................................................................................................................................................................TCAGGCATTAT-------------------------------CGTACCGG.........................................................................1911.00100000000001000000
..................................................................................................................................................................................................................................ACTAGGCGATAGCCATATCAGGC.....................................................................................................................2311.00100010000000000000
...............................................................................................................................................................................................................................TGAACTAGGCGATAGCCATATCAGG......................................................................................................................2511.00100000000001000000
.....................................................................................................................................................................................................................................................AGGCATTAT-------------------------------CGTACCGGTA.......................................................................1911.00100000000001000000
droSec2
ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGCAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTA---------AAAATGACAAATTAAGGTTATATAACGAGTTCACTAAATTGCTTATC--TATATAGGTATT----TATATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTAGGCGATAGCCATATCAGGCATTAT-------------------------------CGTACCCGTATAAGCTAAAGACA----T------------------------------------TC----G------TATTSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
No Reads
dm3
ATAGCTTTGTGGAAAAATCTGACGGATTAATTCTAGAGAATTTGTTCAAGGTAAGCTCGAAAGAAGCCTTTAGTGCACTAATACATAAGAACATTGCATTT---------AAAATATCAAACTAAGGTTATATAATGAGTTCACTACATTTTTTATC--AATATAGGTATT----TACATGTAATCTGTAC--------------------ACCTTATGGACCTGAACTGGGCGATAGCCATATCAGGCCATAT-------------------------------CGTATCCGTATAAGCAACAGACA----T------------------------------------TCGTTAGTAATCGTGTTSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
.......................................................................................................................................................................................................................TATGGACCTGAACTGGGCGAT..................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATAGCTTTGTGGAAAAATCTGACGG.....................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCTTTGTGGAAAAATCTGACGGA....................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TATC--AATATAGGTATT----TACATG.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TC--AATATAGGTATT----TACATGT........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTTCAAGGTAAGCTCGAAAGAAGC...........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGTTCAAGGTAAGCTCGAAAG...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CCTTATGGACCTGAACTGGGCGATAGA...............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGCTTTGTGGAAAAATCTGACGGA....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ATATAATGAGTTCACTACATTT.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATAGCTTTGTGGAAAAATCTGACGGATTGATTTTGGAGAATTTGTTCAAGGTAAGTTCGAAAGACGACTTTAGTGCACTAATATGTAACAACATTTCTTTA---------AAAATGTTAAATTAATAAATTTTAACGAGTTGACTGATTTGTTTATC--TACATACATAAG----TA----TAAAAGGTAG--------------------ACCAAATTTATTTTAATTGTGATAAAGT----------------------------TGCAGTGTTAGTAACATTAGTACTGGTCAAAGTTAAGTTCATTCCG------------------------------------TT----G------TAAASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................TAAGTTCATTCCG------------------------------------TT----...........1540.2510000001
droYak3
ATAGCTTTGTGGAAAAGTCTGACGGATTGATTTTAGAGAATTTGTTTAAGGTAAGTTTAAAACACGACTG---TACACTAAT----------------TTA---------AAAATGTTAAATTAAGGTAATATAACGAGTTGTCGGAATTGATGGTC--TACATAAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
No Reads
droEug1
ACAGTTATGTGGAAAAATCCGATGGACTTATTCTTGAGAATTTATTTAGGGTAAGTTTACTAAAACACATTAATTTACTAATAATCTATAATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
ACAGTTTTGTGGAAAAATCCGATGGGCTGATTCTCGAGAATTTATTTAAGGTAAGTTTATTAT----------------------------------ATCA---------AAAAC-----------------------------------------------------------------------------------------------------------------------AT-----------------------------------------------------------------------------TAGCGACAGCATTAGCATTTAAAAT--------------------------GASizeHit CountTotal NormTotal
No Reads
droTak1
AGGAAT------------------------------------TGTCCACAATAAATATATATATATAGTTAGATGAACCAATTCTTATGAAGTTTGAATTGAAAATGACAAATAT------TATAAACATATTTATGAATTCACCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
GACAAG-------------------------------------------------------------------------------------------------------------------CTAGGACCTTTTACAGGGTTTATT---TTGTTTTCC--TGTATAATTGTT----TGTGTTAA----------------TTATTGATTTACATTACATTGATTTGAACATAATAGT-----------------------------------------------------------------------------AAACCAGAACTATACCAGTTACCCAGCTAATTAATTTC----G------TGGGSizeHit CountTotal NormTotal
No Reads
droRho1
ACAGTTTTGTGGAAAAATCAGATGGACTGATTCTTGAAAATTTGTTCAAGGTAAGATCGGTAGATGAACAT-ATACATTAATTCAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
GAGTATTACA----------------------------------------------------------------------------------------TTA---------AAAATTACGACTCAGGCGTATATTTCTAGTTTTTTACACTACTCGGATTTCTATATGAATC----TGCTTATTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
TTTGGTACATTTATACAT--------------------------------------------------------------------GAAACAGGCGCTTTA---------AAGATGATAAATAGAGCCTTAAAGACCATTTCACTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droAna3
TTAAAAA----------------------------------------------------------------------------------------------------------AAATTATTCTTAGGTTATGGAAAAAAATAAATTAATTGTATATC--CATATATATATA----TATATATA-----TAT--------------------ATCTCGT-------------------------------------------------------------------------------------------------------------------------------------------------GGASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
ATAAAT--------------------------------------------------------------------------------AAGAACCCAGTTTCA---------TATACAGCAAATTAAAGATTTATAACGTTTTAATTTA-------ATC--CAATTTGGTATT----TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
dp5
ATGCTTTTGTGGAAAAATCGGATGGACTCGTGTTGGAGACTCTATTCAAGGTAAGTTCGTAAA-AGTGTCAAATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
No Reads
droPer2
ATGCTTTTGTGGAAAAATCGGATGGACTCGTGTTGGAGACTCTATTCAAGGTAAGTTCGTAAA-AGTGTCAAATGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
No Reads
droWil2
AATTATATATAT----------------------------------------------------------------------------------------------------------------------------------------------------ACATACATGTA----CATATATATTCCACTTAACATTTGG---------------GCTTGAATGAAACTAAGTGATAGCTTTTTTAAATTTTATTATTTTATACCCTTGCAGTATCTGTGAAA---------CTTTTTAAGAAAAACA----G------------------------------------TT----T------TATGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.............................................................................................................................................................................................................................ATGAAACTAAGTGATATA...............................................................................................................................18200.05100010
droVir3
ACAGGCAGGTGGCCAAATCAAAGGGCCAACTGTTGGAGACGCTCCTTAAGGCGAGTACTGGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------TG----------GC-----------------------------------------------------------------------------AAGTGGCAGCTCTAGAG-------------------TC----T------TAATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
No Reads
droMoj3
TATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATATATATATATAC-CGTTTCCATTAGTACTAGG---------------CACTGATCTGCACTAAATGCTCGCCATAGCAATAATAAA-------------------------------GGAACACTT-------------------------------GCTT--------------------GG----T------TATASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
No Reads
droGri2
ATAGCAATGTGGCCGAGTCAAAGGGTCAGATATTGGAAACGCTCTTCAAGGTGAGCACTCAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 12:18 PM