ID:

dsi_1361

 Coordinate:

x:15071756-15071905 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.6 -10.6 -10.4

Flybase annnotation

exon [x_15071906_15072431_-]; five_prime_UTR [x_15071906_15072431_-]; intron [x_15070659_15071905_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGATGAGATGATGTTGATGATGATGATGATATGATGACTCTTCGGGTCGTGTATGTATGAAGAAAAGAACCGAATGAATTTTTTGTGTTCGGCTCGTTTGGCAAAAAAGGGCTTAGCCTAAAGTTTGTGTGTGGTGTGCTGTGGTGTGCGGCTCATATAAATCGCTTGTGTTTTAGATAGATGTTGATGTACAAGAGGGTGCAGCATTTCCCCATATATATCCCTATGTACATAAAGTATATGTACGGTG
*************************************************************************(((((((((....(((.(((((.(((.....))).))))).)))..)))))))))......******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 O002
Head
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.........................................................................ATGAATTTTTTGTGTTCGGCT............................................................................................................................................................ 21 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0
.................TGATGATGATGATATGACGACC................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................ATGATGATATGATGACTCTTCGGGT........................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................GTTTGGCAAAAAAGGGCTTAG...................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................TCGTGTATGTATGAAGAAAAGAACCGAAT............................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
................................................................................................TTTGGCAAAAAAGGGCTTAGCCT................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................GCCTAAAGTTTGTGTGTGG.................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................GATGATATGATGACTCTTCGGGTC.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................TGTTTTGGATAGATGTTGATG............................................................. 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0
..............TGATGATGATGATGATA........................................................................................................................................................................................................................... 17 0 20 0.85 17 17 0 0 0 0 0 0 0 0 0
............................................................................................CTCGTGTGGAACAAAAGGG........................................................................................................................................... 19 3 20 0.80 16 0 0 0 5 11 0 0 0 0 0
...TGAGATCATTTTGATGCTGAT.................................................................................................................................................................................................................................. 21 3 13 0.54 7 0 5 1 0 0 0 0 0 0 1
.................................................................................................................TAGACGAAATTTTGTGTGTGG.................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0
..............TGATGATGATGATGATATGATGGCCCAT................................................................................................................................................................................................................ 28 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................AGTCCGGCTTGTTTGGCAAAA................................................................................................................................................ 21 3 2 0.50 1 0 0 0 0 0 0 0 0 1 0
TGACAAGATGCTGTTGATGATG.................................................................................................................................................................................................................................... 22 3 7 0.43 3 0 0 0 3 0 0 0 0 0 0
TGCTGTGATGATGATGATGATGATGATGATA........................................................................................................................................................................................................................... 31 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........TGATGATGATGATGATGATATGAAGA..................................................................................................................................................................................................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..............TGATGATGATGATGATATGA........................................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
TGACAAGATGCTGTTGATGATGA................................................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
........TGATGTTGATGATGATGATGA............................................................................................................................................................................................................................. 21 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
..............TGATGATGATGATGAAATGA........................................................................................................................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...........................................................................GAATTTTATGTCTTCGGC............................................................................................................................................................. 18 2 5 0.20 1 0 0 0 0 0 0 0 1 0 0
..............TGATGATGATGATGATATG......................................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
.................TGATGATGATGATATGAT....................................................................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...............GATGAGGAAGATGATATGAT....................................................................................................................................................................................................................... 20 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
......GATGATGTTGATGATGATGAT............................................................................................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0
...TGAGATGATGATGATGATGATGATG.............................................................................................................................................................................................................................. 25 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
TGATGAGATGATGATGATG....................................................................................................................................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
..............................................................................TTTGGTGTGTTCGGGTCGTTT....................................................................................................................................................... 21 3 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.................TGATGATGATGCTTTGATG...................................................................................................................................................................................................................... 19 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0
.GATGTGATGATGATGATGATGATGATG.............................................................................................................................................................................................................................. 27 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............TGATGATGATGATGAGATGA........................................................................................................................................................................................................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TGATGATGATGATATG......................................................................................................................................................................................................................... 16 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......GATGATGTTGATGATGATG................................................................................................................................................................................................................................. 19 0 11 0.09 1 0 1 0 0 0 0 0 0 0 0
........TGATGTTGATGATGAT.................................................................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......ATGATGATGATGATGATGATGATGTGA........................................................................................................................................................................................................................ 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............TTGATGATGATGATGA............................................................................................................................................................................................................................. 16 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............TGTGATGATGATGAGATGATGA..................................................................................................................................................................................................................... 22 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

ACTACTCTACTACAACTACTACTACTACTATACTACTGAGAAGCCCAGCACATACATACTTCTTTTCTTGGCTTACTTAAAAAACACAAGCCGAGCAAACCGTTTTTTCCCGAATCGGATTTCAAACACACACCACACGACACCACACGCCGAGTATATTTAGCGAACACAAAATCTATCTACAACTACATGTTCTCCCACGTCGTAAAGGGGTATATATAGGGATACATGTATTTCATATACATGCCAC
********************************************************************************************************************(((((((((....(((.(((((.(((.....))).))))).)))..)))))))))......************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.....................CTACTACTATACTACTTAGCCG............................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0
................................................................................................................................................................................................................AGGGGTATATTTAGGGAAA....................... 19 2 2 0.50 1 0 1 0
.CTACTCTACTACTACTACTACT................................................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0
....................................................................................................................................................................GGACACAAAATCTAT....................................................................... 15 1 7 0.29 2 0 0 2
.............AACTACTACTACTACT............................................................................................................................................................................................................................. 16 0 20 0.10 2 2 0 0
...............CTACTACTACTACTAT........................................................................................................................................................................................................................... 16 0 20 0.05 1 1 0 0
.............AACTACTACTACTACTA............................................................................................................................................................................................................................ 17 0 20 0.05 1 1 0 0
...........AGAACTACTACTACTACT............................................................................................................................................................................................................................. 18 1 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:15071706-15071955 - dsi_1361 TGATGA-GATGATGTTGATGATGATGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAA-----TTTTT-TGTGTTCGGCTCGTTTGGCAAAAAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------GTGCTGTGGTGTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------CATA--TATA--TCC----C---TATGTACATAAAGTATAT-----GT--------AC-G------------------------GTG
droSec2 scaffold_183:23896-24130 - TGATGATGATGATG---------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAA-----TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------GTGCTGTGGTGTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TATA--TCC----C---TATGTACATAAAGTATAT-----AT--------AC-G------------------------GTG
dm3 chrX:15899163-15899402 - TGATGA-GATGGTGTTGATGATGATGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAAT----TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATATTCC---------------TATA--TATA--TAC----C---AATGTACATAAAGTATAT-----AT--------AC-G------------------------GTG
droEre2 scaffold_4690:11150635-11150871 + TGATGATGTTGATGATG------------AT-ATGA--TGAC--TTCGGGTCG--------TGTATGTATGA-------AGAAATGAACCGAATGA------TTTTT-TGTGTTCGGCTCGTTTGGCAA--AAGGGCTTAG------CC-TAAAGTTTGTGTGTGGTG--------------------TGCTGTGGTGTGCTGTGGTGTGCG--------------GCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TATGTGTACATACTATCTACGTATATA---TATAT-----AT--------AT-G------------------------GAG
droYak3 X:10087933-10088201 - TGATGATGA-GATGATG------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGA------TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTAGTGTGTGGTGTG-GTGTGGTGTGTGCTTTGGTGTGCTGTGGTGTGCGGCT-CATATAAACGGCTTGTGTTTTACATAGTTGGATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TA----TACATACCAC---------TTAAGTATA-TACATAT--------AC-G------------------------GAG
droEug1 scf7180000409218:34126-34347 - TGATGATGGCGATG---------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGA--------TTT-TGTGTTCGGCTCGCTTGGCAAAAAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGTAGCT-CATATTAATTGCTTGAGTTTTATAT--------------------ACGTACAAGAGGGTGCAG-------TCCCTGTGATT--AAACATTATACA---------------------------------------TATTTGGATGTAC-GAA-------TGGGAAAAAT---AA-TG
droBia1 scf7180000302126:1116448-1116741 + TGGTGATGGTGGTGATGAAGACGATGATAAT-ATGA--TGACTCTTCGGGTCGTCGTATGGTGTATGTATGA-------AGAAAAGAACCGAGTGGA--------AT-TGTGTTCGGCTCGCTGGGCAA--AAGGGCTTAG------CC-TAAAGTCTGTGTGCGGTGTGTGCTGTGTGTGCGGTGA---------------GTGTTGTGCGGCT-CATATTAATTGCTTGTGTTTTAGACGGCT-GATGGTG--------ATGTGCGAGAGGGTGCAG---CAGCGGCCAGCAGTC-GAAAAACGATACA---------------------------------------TATATGGGTGTACCGACCCCCGGCCAGC-CCACTTAGCA-CT
droTak1 scf7180000415169:13250-13507 + TAATGATGATGATGATAATAATGACGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATCCGAGTGATTTTG-AGTG-TCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------------------GTGGCT-CATATTAATTGCTTGTGTTTTAGATAG----ATGT-GATGTACAGATGTACGAGAGGGTGCAG---CAGTC-GCAGTAGTT-GAAAAACGATACA--TA--T----------------------GT---------ATATGGATGTAC--A----------------CTTTTCAGTT
droEle1 scf7180000491023:612447-612631 + AAAGAAATGAA------------------------------------------------------------A-------AGAAAGGAAAGGAATGGAA----CCGAA-TGTGTTCGGCTCGTTTTGCAA---AGGGCTCAG------CC-AAAAGTTTGTGTGT---------------------------------------------GTCGCT-CGTATAAATTGCTTGTGTTTTAGATAG----CTG-TG--------ATGTACAAGAGGGTGCAGTCGCAGTCCCCAGTGGGT-AAAAAACGACACA---------------------------------------TAAACGGATGTAC-GA-------------------------C
droRho1 scf7180000777873:56409-56624 - TT--------------------------------TG--TGACTCCTTGGCTCG--------TGTATGTATGAACCGTAAAGAAAAGAACCGAGC---------------GTGTTCTACTCGTTTGGCAA---AGGGCTCAGTCGGAACC-GAAAGTTTGTGTGTGG-----------------------------------------------TT-CGTATTAATTGCTTGTGTTTTAGATAG----CTG-TG--------ATGAACAAGAGGGTGCAGTCGCAGTC-CCAGCGGTT-AAAAAACGATACA---------------------------------------CATACGGATGTAC-GAC-------TGGC-TCGCT---CA-TC
droFic1 scf7180000454038:1171681-1171928 - GGAGGC-AATAATGTCTATG---------AT-ATGATTTGA--CTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGTAC---ATTTTCATTCATTCGGCTCGTTTGCCAA-AAAGGGCTTAG------CCTTAAAGTTTGTGTGT---------------------------------------------GTGGCTCCATATTAATTGCTTGTGTTTTAGATAG----CTGTTG--------ATGTACAAGAGGGTGCAG---CAGTTGTCAGTGGTTCGAAAACCGATACA--TA--TACATAT---------AAAAAAAATATA--------TTGGATGGAC-GA------------------------CC
droKik1 scf7180000302461:1967665-1967705 - GGATAATGATGCCGCCGACGATGATGATAATGATGA--TGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:22811191-22811295 - TAATGATGGTCATGATGATGATGTTAATGAAGATGA--TGATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATGAAACTACGG---T-----------------------ATA--TA----TACATAT-AT---------ATAAATATA-TATTTGT----ATAGTC-GA-----------G-TGAAT---TT-TT
dp5 XR_group6:2973250-2973277 + TGATGAGAGTGCTGATGATGATGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_39:509454-509482 + TGATGATGATGATGATGATGATGATGATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:12099935-12100041 + TGACGATGATGATGATGATGATGATGATGATGGTGA--TGAGTT----GGCTA--------AATGTATATGA-------TATATGTGGTTGGTTGGT-----GGTTT-TGTTTTTTGGTCAACAGGCAA-CAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12875:6206794-6206832 + TGATGATGATGACGATGATGATGATGAT------GA--TGGCTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6308:2648328-2648366 + TGATGATGATGATGATGATGATGATGATGATGATGA--TGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:5625042-5625112 - TGATGATGATGACGATGACGACGATGATGACGATGA--CGACGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACG--TG--TACGTGT---------GAGAGAAGCAAA--------TGA------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGATGA-GATGATGTTGATGATGATGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAA-----TTTTT-TGTGTTCGGCTCGTTTGGCAAAAAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------GTGCTGTGGTGTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------CATA--TATA--TCC----C---TATGTACATAAAGTATAT-----GT--------AC-G------------------------GTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................ATGAA-----TTTTT-TGTGTTCGGCT.................................................................................................................................................................................................................................................................................2112.00211000000000000000
.......................ATGATGAT-ATGA--TGACTCTTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
........................................................................................................................GTTTGGCAAAAAAGGGCTTAG------.....................................................................................................................................................................................................................................................2111.00110000000000000000
..................................................TCG--------TGTATGTATGA-------AGAAAAGAACCGAAT..........................................................................................................................................................................................................................................................................................................2911.00100000000100000000
.........................................................................................................................TTTGGCAAAAAAGGGCTTAG------CC-T.................................................................................................................................................................................................................................................2311.00110000000000000000
............................................................................................................................................G------CC-TAAAGTTTGTGTGTGG..................................................................................................................................................................................................................................1911.00100000100000000000
.........................GATGAT-ATGA--TGACTCTTCGGGTC....................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
...............TGATGATGATGATGAT-A.......................................................................................................................................................................................................................................................................................................................................................................17200.8517000000000017000000
...............TGATGATGATGATGAT-ATGA--..................................................................................................................................................................................................................................................................................................................................................................2030.33100000000001000000
.........TGATGTTGATGATGATGATGA..........................................................................................................................................................................................................................................................................................................................................................................2140.25100000001000000000
...............TGATGATGATGATGAT-ATG.....................................................................................................................................................................................................................................................................................................................................................................1950.20100000000001000000
..................TGATGATGATGAT-ATGA--T.................................................................................................................................................................................................................................................................................................................................................................1850.20100000000001000000
.......GATGATGTTGATGATGATGAT............................................................................................................................................................................................................................................................................................................................................................................2170.14100000000001000000
..................TGATGATGATGAT-ATG.....................................................................................................................................................................................................................................................................................................................................................................16110.09100000000001000000
.......GATGATGTTGATGATGATG..............................................................................................................................................................................................................................................................................................................................................................................19110.09110000000000000000
.........TGATGTTGATGATGAT...............................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
..............TTGATGATGATGATGA..........................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
TGATGATGATGATG---------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAA-----TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------GTGCTGTGGTGTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TATA--TCC----C---TATGTACATAAAGTATAT-----AT--------AC-G------------------------GTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................GTTCGGCTCGTTTGGCAA-AAAGGGC...............................................................................................................................................................................................................................................................2511.0010001
.....................................................................................................................................................................GT------------------------------GTGCTGTGGTGTGCGGCT-................................................................................................................................................................................2011.0010100
..........................................................................................................................................................................................................................................TTTAGATAG----ATGTTG--------ATGTAC.............................................................................................................................2111.0010001
................................................................................................................................................................................................................................................TAG----ATGTTG--------ATGTACAAGAG........................................................................................................................2011.0010100
...........................................................................................................................TGGCAA-AAAGGGCTTAG------C....................................................................................................................................................................................................................................................1811.0010100
................................................................................................................................................................................................................................................TAG----ATGTTG--------ATGTACAAGAGG.......................................................................................................................2111.0010100
dm3
TGATGA-GATGGTGTTGATGATGATGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGAAT----TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGCGGCT-CATATAAATCGCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATATTCC---------------TATA--TATA--TAC----C---AATGTACATAAAGTATAT-----AT--------AC-G------------------------GTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................GCTTGTGTTTTAGATAG----AT...............................................................................................................................................1917.0070000000000000000000000000000000000000000000000000000000006100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGATGAT-ATGA--TGACTCTTCGGG......................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTACAAGAGGGTGCAG---CAT...........................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGATGAT-ATGA--TGACTCTTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGATGATGAT-ATGA--TGACTCTT..........................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGATGATGAT-ATGA--TGACTCTTCG........................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000000000000000
.......................................................................................................................................................AAAGTTTGTGTGTGGT----------------------------------------GTG......................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000001000
..........GGTGTTGATGATGATGATGAT-AT......................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TCGCTTGTGTTTTAGATAG----AT...............................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGC.....................................................................................................................................................................................2713.0030000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.GATGA-GATGGTGTTGATGA...................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
................................ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTTTGTGTGTGGT----------------------------------------GTGCGGCT-................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
............................GAT-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCGGGTCG--------TGTATGTATGA-------AG.......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCGTTTGGCAA-AAAGGGCTTAG------CC-..................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GCTTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------G........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TGTGTGTGGT----------------------------------------GTGCGGCT-CAT.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................ATGATGAT-ATGA--TGACTCTTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TTT-TGTGTTCGGCTCGTTTGG..........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................T-TGTGTTCGGCTCGTTTGGCAA-AAAGGGC...............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGTTGATGATGATGATGAT-AT......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TGTACAAGAGGGTGCAG---C.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GGGTGCAG---CATATTCC---------------TAT....................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GACTCTTCGGGTCG--------TGTATGTATG.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.GATGA-GATGGTGTTGATGAT..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.GATGA-GATGGTGTTGATGATGATG..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TT-TGTGTTCGGCTCGTTTGGCAA-AAAG..................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGGT----------------------------------------GTGCGGCT-CATATAAATCGCT...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CATATAAATCGCTTGTGTTTTA..........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................AAGGGCTTAG------CC-TAAAGTTTGTGTG.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............TGATGATGATGATGAT-ATGA--..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TT-TGTGTTCGGCTCGTTTGGC.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATGATGATGATGAT-ATG.....................................................................................................................................................................................................................................................................................................................................................................1941.0040000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CGTTTGGCAA-AAAGGGCT..............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.......GATGGTGTTGATGATGATGATGA..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTAGATAG----ATGTTG--------ATGTACAAGAGGG......................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................TTGTGTTTTAGATAG----ATGTTG--------ATGTA..............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................GTTG--------ATGTACAAGAGGGTGCAG---C.............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGA-GATGGTGTTGATGATGATG..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................TGATGATGATGAT-ATGA--TGACTC............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGATGAT-ATGA--TGACTCTTCGGGTCG--------...........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................TTAGATAG----ATGTTG--------ATGTACA............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGATGATGAT-ATGA--TGACTCTTC.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TG--------ATGTACAAGAGGGTGCAG---CATATTCC---------------.......................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AGAAAAGAACCGAATGAAT----T.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................G------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGC.....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAGGGCTTAG------CC-TAAAGTTTGTGTGT....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................TTCGGCTCGTTTGGCAA-AAAG..................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TGTTG--------ATGTACAAGAGGGTG....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CTTGTGTTTTAGATAG----AT...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAA-AAAGGGCTTAG------CC-TAAAGTTTGTG.......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTTTT-TGTGTTCGGCTCGTTTGGC.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTTTGTGTGTGGT----------------------------------------GTGCG....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................C-TAAAGTTTGTGTGTGGT----------------------------------------GTGCGGC..................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................TCG--------TGTATGTATGA-------AGAAAAGAACCGAA...........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................T----TTTTT-TGTGTTCGGCTCGTTTGGC.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................GCTTGTGTTTTAGATAG----ATG..............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATGATGATGATGAT-ATGA--TGACT.............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTATGTATGA-------AGAAAAGAAC...............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AGATAG----ATGTTG--------ATGTACAAGAG........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGGCAA-AAAGGGCTTAG------CC-TA................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TTT-TGTGTTCGGCTCGTTTGGCAA-A.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAGATAG----ATGTTG--------ATGTACAAGAGGG......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............TTGATGATGATGATGAT-ATGG--..................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................AG----ATGTTG--------ATGTACAAGAGGGTGCA..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.................................................................................................................................................................TGTGGT----------------------------------------GTGCGGCT-CATAT...........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTTTTAGATAG----ATGTTG--------ATGT...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAT-ATGA--TGACTCTTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................TGGT----------------------------------------GTGCGGCT-CATATAAATCG.....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGATGAT-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................TCGCTTGTGTTTTAGATAG----ATGTTG--------A..................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................AAT----TTTTT-TGTGTTCGGCTCG...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................TTGTGTTTTAGATAG----ATGTTG--------...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GTACAAGAGGGTGCAG---CA............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGA-------AGAAAAGAACCGAATGAAT----TTTT..............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGATGATGAT-ATGA--TGACTCTTCG........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGAT-ATGA--TGACTCTTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTGGCAA-AAAGGGCTTAG------CC-TAAAGTT...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATGATGAT-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..ATGA-GATGGTGTTGATGAT..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGATGA-GATGGTGTTGATGA...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCGTTTGGCAA-AAAGGGCTT.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................TGATGATGAT-ATGA--TGACTCTTCGGG......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTCGGCTCGTTTGGCAA-AAAGGGC...............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................G----ATGTTG--------ATGTACAAGAGG.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.................................TGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................T-ATGA--TGACTCTTCGGGTCG--------TGTATGTA...................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................T-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TT-TGTGTTCGGCTCGTTTG...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................AT-ATGA--TGACTCTTCGG.......................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGATGAT-ATGA--TGACTCTTCGG.......................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTCTTCGGGTCG--------TGTATG.....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............TGATGATGATGATGAT-AT......................................................................................................................................................................................................................................................................................................................................................................18100.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATGATGATGATGAT-ATGA--TCCT..............................................................................................................................................................................................................................................................................................................................................................24100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TGTTGATGATGATGATGAT-........................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droEre2
TGATGATGTTGATGATG------------AT-ATGA--TGAC--TTCGGGTCG--------TGTATGTATGA-------AGAAATGAACCGAATGA------TTTTT-TGTGTTCGGCTCGTTTGGCAA--AAGGGCTTAG------CC-TAAAGTTTGTGTGTGGTG--------------------TGCTGTGGTGTGCTGTGGTGTGCG--------------GCTTGTGTTTTAGATAG----ATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TATGTGTACATACTATCTACGTATATA---TATAT-----AT--------AT-G------------------------GAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........GATGATG------------AT-ATGA--TGAC--TTCGGGT.....................................................................................................................................................................................................................................................................................................................................................2411.0011000000
droYak3
TGATGATGA-GATGATG------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGA------TTTTT-TGTGTTCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTAGTGTGTGGTGTG-GTGTGGTGTGTGCTTTGGTGTGCTGTGGTGTGCGGCT-CATATAAACGGCTTGTGTTTTACATAGTTGGATGTTG--------ATGTACAAGAGGGTGCAG---CATTTCCC---------------TATA--TA----TACATACCAC---------TTAAGTATA-TACATAT--------AC-G------------------------GAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................G------------AT-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....GATGA-GATGATG------------AT-ATGA--T.................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
......................................................................................................................................................................TGTGTGGTGTG-GTGTGGTGTGTG..........................................................................................................................................................................................................2311.00100010000000
.............GATG------------AT-ATGA--TGACTCTTCGGG......................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............................T-ATGA--TGACTCTTCGGGTCG--------T..........................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
TGATGATGGCGATG---------------AT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGA--------TTT-TGTGTTCGGCTCGCTTGGCAAAAAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT----------------------------------------GTGTAGCT-CATATTAATTGCTTGAGTTTTATAT--------------------ACGTACAAGAGGGTGCAG-------TCCCTGTGATT--AAACATTATACA---------------------------------------TATTTGGATGTAC-GAA-------TGGGAAAAAT---AA-TGSizeHit CountTotal NormTotal
No Reads
droBia1
TGGTGATGGTGGTGATGAAGACGATGATAAT-ATGA--TGACTCTTCGGGTCGTCGTATGGTGTATGTATGA-------AGAAAAGAACCGAGTGGA--------AT-TGTGTTCGGCTCGCTGGGCAA--AAGGGCTTAG------CC-TAAAGTCTGTGTGCGGTGTGTGCTGTGTGTGCGGTGA---------------GTGTTGTGCGGCT-CATATTAATTGCTTGTGTTTTAGACGGCT-GATGGTG--------ATGTGCGAGAGGGTGCAG---CAGCGGCCAGCAGTC-GAAAAACGATACA---------------------------------------TATATGGGTGTACCGACCCCCGGCCAGC-CCACTTAGCA-CTSizeHit CountTotal NormTotal
No Reads
droTak1
TAATGATGATGATGATAATAATGACGATGAT-ATGA--TGACTCTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATCCGAGTGATTTTG-AGTG-TCGGCTCGTTTGGCAA-AAAGGGCTTAG------CC-TAAAGTTTGTGTGTGGT------------------------------------------GTGGCT-CATATTAATTGCTTGTGTTTTAGATAG----ATGT-GATGTACAGATGTACGAGAGGGTGCAG---CAGTC-GCAGTAGTT-GAAAAACGATACA--TA--T----------------------GT---------ATATGGATGTAC--A----------------CTTTTCAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
AAAGAAATGAA------------------------------------------------------------A-------AGAAAGGAAAGGAATGGAA----CCGAA-TGTGTTCGGCTCGTTTTGCAA---AGGGCTCAG------CC-AAAAGTTTGTGTGT---------------------------------------------GTCGCT-CGTATAAATTGCTTGTGTTTTAGATAG----CTG-TG--------ATGTACAAGAGGGTGCAGTCGCAGTCCCCAGTGGGT-AAAAAACGACACA---------------------------------------TAAACGGATGTAC-GA-------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
TT--------------------------------TG--TGACTCCTTGGCTCG--------TGTATGTATGAACCGTAAAGAAAAGAACCGAGC---------------GTGTTCTACTCGTTTGGCAA---AGGGCTCAGTCGGAACC-GAAAGTTTGTGTGTGG-----------------------------------------------TT-CGTATTAATTGCTTGTGTTTTAGATAG----CTG-TG--------ATGAACAAGAGGGTGCAGTCGCAGTC-CCAGCGGTT-AAAAAACGATACA---------------------------------------CATACGGATGTAC-GAC-------TGGC-TCGCT---CA-TCSizeHit CountTotal NormTotal
No Reads
droFic1
GGAGGC-AATAATGTCTATG---------AT-ATGATTTGA--CTTCGGGTCG--------TGTATGTATGA-------AGAAAAGAACCGAATGTAC---ATTTTCATTCATTCGGCTCGTTTGCCAA-AAAGGGCTTAG------CCTTAAAGTTTGTGTGT---------------------------------------------GTGGCTCCATATTAATTGCTTGTGTTTTAGATAG----CTGTTG--------ATGTACAAGAGGGTGCAG---CAGTTGTCAGTGGTTCGAAAACCGATACA--TA--TACATAT---------AAAAAAAATATA--------TTGGATGGAC-GA------------------------CCSizeHit CountTotal NormTotal
No Reads
droKik1
GGATAATGATGCCGCCGACGATGATGATAATGATGA--TGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TAATGATGGTCATGATGATGATGTTAATGAAGATGA--TGATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGATGAAACTACGG---T-----------------------ATA--TA----TACATAT-AT---------ATAAATATA-TATTTGT----ATAGTC-GA-----------G-TGAAT---TT-TTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...TGATGGTCATGATGATGA...................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
dp5
TGATGAGAGTGCTGATGATGATGATGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TGATGATGATGATGATGATGATGATGATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TGACGATGATGATGATGATGATGATGATGATGGTGA--TGAGTT----GGCTA--------AATGTATATGA-------TATATGTGGTTGGTTGGT-----GGTTT-TGTTTTTTGGTCAACAGGCAA-CAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................ATGATGATGATGGTGA--TGAGT.............................................................................................................................................................................................................................................................................................................................................................2120.50101000
..........GATGATGATGATGATGATGATGGT......................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......TGATGATGATGATGATGATGATGATGG.......................................................................................................................................................................................................................................................................................................................................................................27200.05100001
...........ATGATGATGATGATGATGATGGT......................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.............GATGATGATGATGATGATGGT......................................................................................................................................................................................................................................................................................................................................................................21200.05100001
droVir3
TGATGATGATGACGATGATGATGATGAT------GA--TGGCTGTTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............TGATGATGATGAT------GA--TGGCTGA...........................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000000000010000000000000000000000000000000000
.GATGATGATGACGATGAT.....................................................................................................................................................................................................................................................................................................................................................................................18200.153000000000030000000000000000000000000000000000000000000000000000
......TGATGACGATGATGATGATGAT------GA--TG................................................................................................................................................................................................................................................................................................................................................................2690.111000000000010000000000000000000000000000000000000000000000000000
....GATGATGACGATGATGATGAT...............................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000010000000000000000000001000000000000000000000000000
.............GATGATGATGATGAT------GA--TG................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000100000000001000000000000000000000000000000000
....GATGATGACGATGATGATGATGAT------G.....................................................................................................................................................................................................................................................................................................................................................................25120.081000000000000000000000001000000000000000000000000000000000000000
....GATGATGACGATGATGATGATGAT------......................................................................................................................................................................................................................................................................................................................................................................24130.081000000000000000001000000000000000000000000000000000000000000000
.GATGATGATGACGATGATGA...................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...............TGATGATGATGAT------GA--TGG...............................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000100000000000000000000000000000
..........GACGATGATGATGATGAT------G.....................................................................................................................................................................................................................................................................................................................................................................19200.051000000010000000000000000000000000000000000000000000000000000000
TGATGATGATGACGATGATG....................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
.........TGACGATGATGATGATGAT------GA--T.................................................................................................................................................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
......TGATGACGATGATGATGA................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
............CGATGATGATGATGAT------GA--T.................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
..............ATGATGATGATGAT------GA--TGGC..............................................................................................................................................................................................................................................................................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
TGATGATGATGATGATGATGATGATGATGATGATGA--TGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...TGATGATGATGATGATGATG.................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
.GATGATGATGATGATGATGATG.................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
droGri2
TGATGATGATGACGATGACGACGATGATGACGATGA--CGACGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACG--TG--TACGTGT---------GAGAGAAGCAAA--------TGA------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................GACGACGATGATGACGATG.....................................................................................................................................................................................................................................................................................................................................................................19150.07110
..ATGATGATGACGATGACGAC..................................................................................................................................................................................................................................................................................................................................................................................20170.06110
..........GACGATGACGACGATGATG...........................................................................................................................................................................................................................................................................................................................................................................19200.05110

Generated: 05/18/2015 at 10:22 PM