ID:

dsi_1356

 Coordinate:

2r:3172450-3172599 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.4 -6.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTTATTTTATATGTGCGAACAAGAAAGGGATAGCCGAACTTTTTTACAATACTTTTTATAGGATCTTGTTTGGTCTATGCAAGTACGATTTTACCTATAAATCGCTCTGTGCAGTATAGTGCTCTTTTTTGTTGGCACATGCTTCACAAAATGTGTGTCCTTACTTACTTTTCTCGGTTCGATCACCTCCGTTCTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGGTGGAGGTCAAAGCCAGAA
******************************************************************************************************************...((.((....((((((.(((....)))..)))))).....)).)).....................******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR902008
ovaries
 M025
embryo
 GSM343915
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M024
male body
..............................................................................................................................................................................CGGTTGGATCACCTCCTTTCT....................................................... 21 2 2 17.00 34 34 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCGGTTGGATCACCTCCTTTCT....................................................... 22 3 3 11.00 33 33 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GTTGGATCACCTCCTTTCT....................................................... 19 2 3 8.67 26 26 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GATCACCTCCTTTCT....................................................... 15 1 11 5.27 58 51 1 1 3 0 0 0 0 0 2 0
.............................................................................................................................................................................GCGGTTGGATCACCTCCCTTCT....................................................... 22 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGCTGGATCACCTCCCTTCT....................................................... 21 3 3 4.00 12 12 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGAGAATGTGGGCATTATACTGAACA............................ 26 2 1 3.00 3 0 1 0 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGT........................ 24 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTG....................... 25 0 1 2.00 2 0 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGGG..................... 27 0 1 2.00 2 0 0 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................TGAGAATGTGGGCATTATACTGAAC............................. 25 2 1 2.00 2 0 1 0 1 0 0 0 0 0 0 0
..................................................................................................................TATAGTGCTCTTTTTTGTTGGC.................................................................................................................. 22 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................................TACTGAACAAGGTGGGTGGTGGAG............. 24 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................GTTGGATCACCTCCCTTCT....................................................... 19 2 2 1.50 3 3 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTCGATCACCTCCCTTCT....................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTATACTGAACAAGGTGGGT.................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GATCGATCACCTCCTTTCT....................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGGGT.................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................CGGCTGGATCACCTCCGTTCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................CTGTCTCCTTACTTACTTTT.............................................................................. 20 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................TGAGAATGTGGGCATTATACTGA............................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGCGGTTCGATCACCTCCCTTCT....................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................ATTTCTCGGTTCGATCCCC............................................................... 19 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................ATGTGGGCATTATACTGAACAAGGTGGT..................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................GCAGAATGTGGGCATTATACTGAA.............................. 24 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................CGGCTCGATCACCTCCTTTCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGGGA.................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TACTGAACAAGGTGGGTGGTGGAGG............ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TGGGAATGTGGGCATTATACTGAACA............................ 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCCCTTCT....................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGTCCTTACTTACTTTTCTCGGTTCGA.................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................GCTCGATCACCTCCTTTCT....................................................... 19 2 2 1.00 2 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCCTTTC........................................................ 20 2 4 1.00 4 4 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTCGGTTGGATCACC............................................................... 15 1 7 1.00 7 1 0 1 5 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTGGGCATTATACTGAACACGGT........................ 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGG...................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TGAACAAGGTGGGTGGTGGAGGTCAAA....... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATGTGGGCATTATACTGAACAAGGTGGG..................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTGGATCACCTCCTTTCT....................................................... 18 2 8 0.75 6 6 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCGGTTGGATCACCTCCTTTC........................................................ 21 3 5 0.60 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGTTTGGATCACCTCCTTTCT....................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................CGATCACCTCCTTTCT....................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTCGGTTGGATCACCTCCTTTC........................................................ 22 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGTTGGATCACCTCCTTTCT....................................................... 20 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCTTTTCT....................................................... 21 3 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TTCGGTTGGATCACCTCCTTTCT....................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CTCGGCTGGATCACCTCCTTTCT....................................................... 23 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................CTCGGTTGGATCACCTCCTT.......................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................CGGTTGGATCACCTC............................................................. 15 1 10 0.40 4 4 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCTTTTC........................................................ 20 3 9 0.33 3 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCATTTCT....................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGCTCGATCACCTCCTTTCT....................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTGGATCACCTCCCTTCT....................................................... 18 2 4 0.25 1 0 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGCTGGATCACCTCCCTTC........................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCGGTTGGATCACCTCCTTT......................................................... 20 3 8 0.25 2 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TTATCGGTTCGATCCC................................................................ 16 2 18 0.22 4 4 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGACCACCTCCTTTCT....................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TGGATCACCTCCTTTCT....................................................... 17 2 20 0.20 4 0 0 3 0 0 0 0 0 0 1 0
.................................................................................................................................................................................CTCGATCACCTCCTTTCT....................................................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGCTTGATCACCTCCCTTCT....................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TGCGGTTCGATCACCTCC............................................................ 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGCTGGATCACCTCCCTTCT....................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GCGATCACCTCCTTTCT....................................................... 17 2 12 0.17 2 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GTTTAGATCACCTCCTTTCT....................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TTGTCGGTTCGATCCC................................................................ 16 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGGTGGATCACCTCCTTTCT....................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGCTCGATCATCTCCTTTCT....................................................... 21 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGTTGGATCACCTCCTTTCT....................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCACCTCCTTTTT....................................................... 21 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGTTTGGATCACCTCCTTTC........................................................ 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CGGTTGGATCTCCTCCTTTCT....................................................... 21 3 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GTGGGTCGTGGAGGT........... 15 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GGTTCGATCCCCGTCGTTC........................................................ 19 3 13 0.08 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................GTTCGATCACCTCCTTA......................................................... 17 2 15 0.07 1 0 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................GTTCGATTACCTCCGGGC........................................................ 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................AGCAGAATAGTGCTCT............................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................TGGATCACCTCCCTTCTA...................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACAAGATGGCTGGTGGAC............. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GCGGCTAGATCACCTCCG........................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................CTCGATCACCTCCTTTC........................................................ 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GCAGTATGGTGATCTATTT......................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................................TGGTGGCGGTTAAAGCC.... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

AAATAAAATATACACGCTTGTTCTTTCCCTATCGGCTTGAAAAAATGTTATGAAAAATATCCTAGAACAAACCAGATACGTTCATGCTAAAATGGATATTTAGCGAGACACGTCATATCACGAGAAAAAACAACCGTGTACGAAGTGTTTTACACACAGGAATGAATGAAAAGAGCCAAGCTAGTGGAGGCAAGAACGTCTTACACCCGTAATATGACTTGTTCCACCCACCACCTCCAGTTTCGGTCTT
********************************************************************...((.((....((((((.(((....)))..)))))).....)).)).....................****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 M053
female body
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
.........................................................................................................................................................................................GGAGGCAAGAACGTCTTACACCCGT........................................ 25 0 1 4.00 4 2 0 0 1 0 0 1 0 0 0
.........................................................................................................................................................ACACAGGAATGAATGAAAAGAGCCAAGC..................................................................... 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.............................TATCGGCTTGAAAAAATGTTATGAAAA.................................................................................................................................................................................................. 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
........................TTCCCTATCGGCTTGAAAAAATGTT......................................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
........................................................................................................................................................CACACAGAAATGAATGAAAAGAGCCAAGC..................................................................... 29 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TGGAGGCAAGAACGTCTTACA............................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................AGAACAAACCAGATACGTTCATGCTA................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................ATGTTCTTGCTAAACTGGATAT....................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................................................ATATCCTAGAACAAACCAGATACGTT........................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........ACACGCTTGTTCTTTCCCTATCGGCT..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................TTTCCCTATCGGCTTGAAAAAATGTTT........................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............................TCGGCTTGAAAAAATGTTATGAAAAAT................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................AGTGTTTTACACACAGAAATGAATGAAA............................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................AAATGGATATTTAGCGAGACACGTCAT...................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................AAGCTAGTGGAGGCAAGAACG.................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................AGTGTTTTACACACAGGAATGAATGAAA............................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAATGAATGAAAAGAGCCAAGCTAGT................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................TGAAAAATATCCTAGAACAA.................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................CGGCTTGAAAAAATGTTATGAAAAAT................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................ACACAGAAATGAATGAAAAGAGCCAAGC..................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................AGAACAAACCAGATACGTTCATGCT.................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................TATCGGCTTGAAAAAATGTTATGAAA................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GAATGAAAAGAGCCAAGCTAGTGGAG............................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................CTAAAATGGATATTTAGCGAGACACGT......................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
....................................................................AAACCAGATACGTTCATGCTAAAAT............................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................AACACAGAAATGAATGAAAAGAGCCAAGC..................................................................... 29 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................TTTCCCTATCGGCTTGAAAAAATGT.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................CTTTCCCTATCGGCTTGAAAAAATGTT......................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CCGTAATATGACTTGTTCCACCCACCA................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................ACAACCGTGGCCGAAGTG....................................................................................................... 18 2 3 0.33 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................GAGGTGTTTTACGGACAGGAA........................................................................................ 21 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................ATAACAACCGTGGCCGAAGTG....................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................AAAAGAGCCCGGCTAGTTGA.............................................................. 20 3 5 0.20 1 0 0 0 0 1 0 0 0 0 0
....AAAATATTCACGCTAGTTTTTT................................................................................................................................................................................................................................ 22 3 6 0.17 1 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................................AAGCTTGTGGAGGCA.......................................................... 15 1 7 0.14 1 0 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................AAGCTAGGGGCGGCAAGAT...................................................... 19 3 7 0.14 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................AGGATGGAATGAAAAGA............................................................................ 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3172400-3172649 - dsi_1356 TTTATTTTATATGTGCGAACAAGAAAGGGATAGC------------C-----------------------------------------------------------------------------------------------GAACTTTTTTACAATACTTTTTATAGGATCTTGTTTGGTCT-------ATGCAA-GTACGATTTTACCTATAAATCGCTCTGTGCAGTATA---GTGCTC-TTTTTTGTTGGCACATGCTTCACAAAATGTGTGTCCTTACTTACTTTTCTCGGTTCGA--TCACCTCCGT--TCTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGGTCAAAGCCAGAA------
droSec2 scaffold_109:16191-16440 - TTTATTTTATATGTGCGAACAAGAAAGGGATAGC------------A-----------------------------------------------------------------------------------------------GAACTTTTTTACAATACTTTTTATAGGATCTTGTTTGGTCT-------ATGCAA-GTACGATTTTACCTATAAATCGCTCTGTGCAGTATA---GTGCTC-TTTTTTGTTGGCACATGCTTCACAAAATGTTTGTCTTTACTTACTTTTCTCGGTTCGA--TCACCTCCGT--TCTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGCTCAAAGCCAGAA------
dm3 chrXHet:79119-79369 + TTT-----ATATGTGCGAAGAAGAAAGAGATAGCATATAGACTTACTGAATTTTAAAAAACATTTTTTAGCACAGACTGTTT-TAAAAGTG----------------TTCA--TTACGACATTTTTCTTCTTATAGCCAATCAAA-CTTTTCACAATACTTTTTATAGGGTC-------------------------------------------------------------------------------------------CACAAAATGTTTGTCTTTAATTACTTGTCTTACTTTAA--TCACCT--CG--TTCTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGCTCAAAGCCAGAA------
droEre2 scaffold_4690:18739240-18739604 + TTTATTCTATATTTGCGAACAAGAAAGAGA--GTCCATACATTGGCTGAATTTTAAAAGACTTGCTTTGCCGCAGGTTGCTTATAAAAACGTAGTAAGTAATATTTGTGCGGTTGATCACATTTTTCTATAAATATAAGATTGCA-TTTTTCACAGTGTTTTTTATACAGTTTTGTTAAATTTGAGTTTAATATGA-GTAAGCTTTTAACTATTAATCTCATTATGCAGTATTCGTGTGTTCATTTTTTGATGGCACATGCTTCACAAAATGTTTGCCATAGCTTACTTTCCTTAACGTGA--TCACTTCCGT--TTTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAG------
droYak3 chrXh:117050-117283 - TTTTCTATAA--------------------------------------------------------------------------------------------------------------------------ATATAAAATCGAA-TTTTGTACAATGTTTTTTATAGTTTTTTCTTTA-TTT-------ATGAACTATTAGCTTTTAACTATCAATCTCTTTGTGCAGTATT---CCTTTC-CTTATTGTTGGCACATTCTTCACAAAATATTTGTCATAGCTTACTTTTCTTAATTTGA--AGACTTCCCT--TTTTGCAGAATGTGGGAATTATACTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAG------
droEug1 scf7180000408987:18345-18403 - TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGAATGTGGGCATCATCCTGAATAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAGAA------
droBia1 scf7180000302520:133711-133783 + TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--TAACAACTCT--TTTTTCAGAATGTTGGCATTATCCTGAACAAGGTAGGCGG---------AG----------------GAGTTCAAACCCAAAA------
droTak1 scf7180000415769:137947-138005 + TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAATGTGGGCATTATCCTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAA------
droEle1 scf7180000491087:427979-428044 - AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGA--TCTTGCAGAACGTGGGCATCATCCTGAACAAGGTGGGTAG---------TG----------------GAGTGCAAAGCCAAAA------
droRho1 scf7180000778808:12008-12066 + TCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGAATGTGGGCATCATCCTAAACAAGGTAGGTGG---------TG----------------GAGTTCAAAGCCAAAA------
droFic1 scf7180000453495:221356-221428 + TTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--AAATGTTTGT--AATTGCAGAATGTGGGCATCATCCTAAACAAGGTGGGAGG---------CG----------------GAGTGCAAAGCCAAAA------
droKik1 scf7180000302610:744604-744668 - CTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TCCCCCAGAATGTGGGCATTATCTTGAACAAGGTGGGCGG---------CG----------------GCGTCCATAATCAAAA------
droAna3 scaffold_13335:508597-508663 - CTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTGTCCAGAATATTGGCATTATCCTGAACAAGGTGGGCGG---------CG----------------GTGTCCAGAGCCAGAA------
droBip1 scf7180000395165:25937-26015 - TCTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCATCCCTTT--GTGTTCAGAATATTGGTATTATCCTGAACAAGGTGAGCGG---------CG----------------GTTCCCAAAGCCAAAA------
dp5 XL_group1e:507658-507707 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATTGGAGGGATCATCCTTAATAAGGTTGG------------TG----------------GAGTTCAGAACCAGAA------
droPer2 scaffold_30:706767-706816 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATTGGAGGGATCATCCTTAATAAGGTTGG------------TG----------------GAGTTCAAAACCAGAA------
droWil2 scf2_1100000004909:6426281-6426375 + TTATCTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTT--AACTACAGAATGTGGGCATCATTCTCAACAAAGTGGGTGGAGGCGCTGTTGCTGCAACTGGGGCAGCTA-ATGCAGCCCAGAA------
droVir3 scaffold_12928:235378-235448 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGAACGTGGGCATCATACTGAATAAGGTGGGCGGCGCCAGCGGCG----------------GTGCGAATAGTCACAACAATAA
droMoj3 scaffold_6359:1578177-1578239 - CCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCA--CTTTATAGAACGTCGGCATCATTTTGAATAAGGTGGGCTC---------TG----------------CGGCTG------GGAA------
droGri2 scaffold_15203:6701436-6701496 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACGTAGGCATCATTTTGAATAAGACGATCGGTGTCGGCAGCG----------------GTGCAAATAGTCACAA------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTATTTTATATGTGCGAACAAGAAAGGGATAGC------------C-----------------------------------------------------------------------------------------------GAACTTTTTTACAATACTTTTTATAGGATCTTGTTTGGTCT-------ATGCAA-GTACGATTTTACCTATAAATCGCTCTGTGCAGTATA---GTGCTC-TTTTTTGTTGGCACATGCTTCACAAAATGTGTGTCCTTACTTACTTTTCTCGGTTCGA--TCACCTCCGT--TCTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGGTCAAAGCCAGAA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGT.......................................................2412.00200000010100000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTG......................................................2512.00200000010100000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGGG....................................................2712.00200000000100010000
.....................................................................................................................................................................................................................................TATA---GTGCTC-TTTTTTGTTGGC.....................................................................................................................................................2212.00220000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAG...................2412.00200000010000010000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGT...................................................2011.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGGGT...................................................2611.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................ATGTGGGCATTATACTGAACAAGGTGGT....................................................2811.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................GCAGAATGTGGGCATTATACTGAA.............................................................2411.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGGGA...................................................2811.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAGG..................2511.00100000001000000000
..................................................................................................................................................................................................................................................................................TGTCCTTACTTACTTTTCTCGGTTCGA--.....................................................................................................2711.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGG.....................................................2411.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------GAGGTCAAA.............2711.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................ATGTGGGCATTATACTGAACAAGGTGGG....................................................2811.00100000010000000000
droSec2
TTTATTTTATATGTGCGAACAAGAAAGGGATAGC------------A-----------------------------------------------------------------------------------------------GAACTTTTTTACAATACTTTTTATAGGATCTTGTTTGGTCT-------ATGCAA-GTACGATTTTACCTATAAATCGCTCTGTGCAGTATA---GTGCTC-TTTTTTGTTGGCACATGCTTCACAAAATGTTTGTCTTTACTTACTTTTCTCGGTTCGA--TCACCTCCGT--TCTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGCTCAAAGCCAGAA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAG...................2420.5010001
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------T.......................................2120.5010010
dm3
TTT-----ATATGTGCGAAGAAGAAAGAGATAGCATATAGACTTACTGAATTTTAAAAAACATTTTTTAGCACAGACTGTTT-TAAAAGTG----------------TTCA--TTACGACATTTTTCTTCTTATAGCCAATCAAA-CTTTTCACAATACTTTTTATAGGGTC-------------------------------------------------------------------------------------------CACAAAATGTTTGTCTTTAATTACTTGTCTTACTTTAA--TCACCT--CG--TTCTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGCTCAAAGCCAGAA------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGG.....................................................2618.0080000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------......................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAGC..................2517.0070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGGG....................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATTATACTGAACAAGGTGGGTGG---------TG----------------......................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000001000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGT.......................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAATGTGGGCATTATACTGAACAAGGT.......................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGT.......................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AATGTGGGCATTATACTGAACAAGGT.......................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGGTGG---------TG----------------GAGCTCAAAGCCAGAA------2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGTGG---------TG----------------......................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GAATGTGGGCATTATACTGAACAAGG........................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------G.....................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------TG----------------......................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGAACAAGGTGGGTGG---------TG----------------G.....................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGT...................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GGTGG---------TG----------------GAGCTCAAAGCCAG........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------TG----------------GAGC..................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
............................................................................................................................................................................................................................................................................................................................................ATTATACTGAACAAGGTGGGT...................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAGGTGGGTGG---------TG----------------GAGCTCAAAGCC..........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAG...................2413.0030000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GA....................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATTATACTGAACAAGGTGGGTGG---------T.......................................2413.0030000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGG.....................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGTGG---------TG----------------G.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100
..........................................................................................................................................................................................................................................................................................................................................GCATTATACTGAACAAGGTGGGTGG---------........................................2512.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------GAGCTCA...............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGGGTGG---------TG----------------GAGCTCAA..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------GAGCTCAAA.............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATGTGGGCATTATACTGAACAAG.........................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------........................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAGGTGGGTGG---------TG----------------GAGCTC................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................AATGTGGGCATTATACTGAACAAGG........................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACAAGGTGGGTGG---------TG----------------GAGCTCAAAGC...........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAGGTGGGTGG---------TG----------------GAGCTCAAAG............2412.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------G.....................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGGGT...................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGTGG---------T.......................................2312.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ACTGAACAAGGTGGGTG..................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------T.......................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................ACAAGGTGGGTGG---------TG----------------GAGCTCAAA.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------TG----------------GAG...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACAAGGTGGGTGG---------TG----------------GAGCTCAAA.............2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGGGTGG---------TG----------------GAGCTCAAA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATTATACTGAACAAGGTGGGT...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAG.........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GGGCATTATACTGAACAAG.........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGGTGG---------TG----------------GAGCTCAAAGCC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GAAAGAGATAGCATATAGAC..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------TG----------------GA....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGGTGG---------TG----------------GAGCTCAAAGCCAGA.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATTATACTGAACAAGGTGGGTGG---------........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCATTATACTGAACAAGGTGGGT...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCATTATACTGAACAAGGTGG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GGTGG---------TG----------------GAGCTCAAAGCCAGAA------2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTGGGTGG---------........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAGT..................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGG........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGT...................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------C.......................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------TG----------------G.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------GAGCTCAA..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------TG----------------......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGGTGGGTGG---------TG----------------GAGCTCAAAGC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAGGTGGGTGG---------TG----------------GAGCT.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTATACTGAACAAGGTGGGTGG---------TG----------------GA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ACTGAACAAGGTGGGTGG---------TG----------------GAGCT.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATTATACTGAACAAGGTGGGTGG---------T.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACAAGGTGGGTGG---------TG----------------GAGCT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAGGTG......................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CATTATACTGAACAAGGTGGGTGG---------........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTG......................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGGTGGGTGG---------TG----------------GAGCTCAA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACA...........................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------TG----------------G.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------T.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TGAACAAGGTGGGTGG---------TG----------------GAGA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGTGG---------TG----------------GA....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTAA--TCACCT--CG--TTCTGCAGA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GGGTGG---------TG----------------GAGCTCAAAGCCA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAGGTGGGTGG---------TG----------------GAGCTCAAAGC...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGGGTGG---------TG----------------GAGCTCA...............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TACTGAACAAGGTGGGTGG---------TG----------------GAGCATC...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGGTGG---------TG----------------GAGCTCAAAGCCAG........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGGTGA.....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TGG---------TG----------------GAGCTCAAAGCCAGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCATTATACTGAACAAGG........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CT--CG--TTCTGCAGAATGTGGG.........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAGGTGGGTGG---------TG----------------GAGCTCAAAGCCAG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TAA--TCACCT--CG--TTCTGCAG.................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATACTGAACAAGGTGGGT...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AACAAGGTGGGTGG---------TG----------------GAGCTCA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATTATACTGAACAAGG........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGCATTATACTGAACAAG.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACTTTAA--TCACCT--CG--TTCTGCAG.................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGGGTGG---------TG----------------GAGCTCAAACAA..........2160.1710000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTATTCTATATTTGCGAACAAGAAAGAGA--GTCCATACATTGGCTGAATTTTAAAAGACTTGCTTTGCCGCAGGTTGCTTATAAAAACGTAGTAAGTAATATTTGTGCGGTTGATCACATTTTTCTATAAATATAAGATTGCA-TTTTTCACAGTGTTTTTTATACAGTTTTGTTAAATTTGAGTTTAATATGA-GTAAGCTTTTAACTATTAATCTCATTATGCAGTATTCGTGTGTTCATTTTTTGATGGCACATGCTTCACAAAATGTTTGCCATAGCTTACTTTCCTTAACGTGA--TCACTTCCGT--TTTTGCAGAATGTGGGCATTATACTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................GAACAAGGTGGGTGG---------TG----------------GAGTTC................2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................AAGGTGGGTGG---------TG----------------GAGTTCAA..............2111.0010000100
droYak3
TTTTCTATAA--------------------------------------------------------------------------------------------------------------------------ATATAAAATCGAA-TTTTGTACAATGTTTTTTATAGTTTTTTCTTTA-TTT-------ATGAACTATTAGCTTTTAACTATCAATCTCTTTGTGCAGTATT---CCTTTC-CTTATTGTTGGCACATTCTTCACAAAATATTTGTCATAGCTTACTTTTCTTAATTTGA--AGACTTCCCT--TTTTGCAGAATGTGGGAATTATACTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................ATACTGAACAAGGTGGGTGG---------TG----------------G.....................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................TGGGAATTATACTGAACAAGGT.......................................................2211.00100100000000
droEug1
TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCAGAATGTGGGCATCATCCTGAATAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAGAA------SizeHit CountTotal NormTotal
No Reads
droBia1
TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--TAACAACTCT--TTTTTCAGAATGTTGGCATTATCCTGAACAAGGTAGGCGG---------AG----------------GAGTTCAAACCCAAAA------SizeHit CountTotal NormTotal
No Reads
droTak1
TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGAATGTGGGCATTATCCTGAACAAGGTGGGTGG---------TG----------------GAGTTCAAAGCCAAAA------SizeHit CountTotal NormTotal
No Reads
droEle1
AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGA--TCTTGCAGAACGTGGGCATCATCCTGAACAAGGTGGGTAG---------TG----------------GAGTGCAAAGCCAAAA------SizeHit CountTotal NormTotal
No Reads
droRho1
TCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGAATGTGGGCATCATCCTAAACAAGGTAGGTGG---------TG----------------GAGTTCAAAGCCAAAA------SizeHit CountTotal NormTotal
No Reads
droFic1
TTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA--AAATGTTTGT--AATTGCAGAATGTGGGCATCATCCTAAACAAGGTGGGAGG---------CG----------------GAGTGCAAAGCCAAAA------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TCCCCCAGAATGTGGGCATTATCTTGAACAAGGTGGGCGG---------CG----------------GCGTCCATAATCAAAA------SizeHit CountTotal NormTotal
No Reads
droAna3
CTCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTGTCCAGAATATTGGCATTATCCTGAACAAGGTGGGCGG---------CG----------------GTGTCCAGAGCCAGAA------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................TATTGGCATTATCCTGAACAAGGTGGGC...................................................2811.001010000
droBip1
TCTTTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCATCCCTTT--GTGTTCAGAATATTGGTATTATCCTGAACAAGGTGAGCGG---------CG----------------GTTCCCAAAGCCAAAA------SizeHit CountTotal NormTotal
No Reads
dp5
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATTGGAGGGATCATCCTTAATAAGGTTGG------------TG----------------GAGTTCAGAACCAGAA------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................TTGGAGGGATCATCCTTAATAAGGTTG.....................................................2711.0010000000010
droPer2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGATTGGAGGGATCATCCTTAATAAGGTTGG------------TG----------------GAGTTCAAAACCAGAA------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTATCTCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTT--AACTACAGAATGTGGGCATCATTCTCAACAAAGTGGGTGGAGGCGCTGTTGCTGCAACTGGGGCAGCTA-ATGCAGCCCAGAA------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................TCTCAACAAAGTGGGTGGAGGCGCTG.........................................2611.00101000
.....................................................................................................................................................................................................................................................................................................................................TGTGGGCATCATTCTCAACAAAGTG......................................................2511.00100001
droVir3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGAACGTGGGCATCATACTGAATAAGGTGGGCGGCGCCAGCGGCG----------------GTGCGAATAGTCACAACAATAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................TCATACTGAATAAGGTGGGCGG.................................................2211.001000000000000000000000000000000100000000000000000000000000000000
droMoj3
CCTCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCCA--CTTTATAGAACGTCGGCATCATTTTGAATAAGGTGGGCTC---------TG----------------CGGCTG------GGAA------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACGTAGGCATCATTTTGAATAAGACGATCGGTGTCGGCAGCG----------------GTGCAAATAGTCACAA------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................GTCGGCAGCG----------------GTGCAAATAGTCA.........2311.00110

Generated: 05/19/2015 at 12:07 PM