ID:

dsi_13496

 Coordinate:

2l:8157044-8157193 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.3 -22.1 -22.1

Flybase annnotation

CDS [2l_8157194_8157280_+]; exon [2l_8157194_8157890_+]; intron [2l_8156386_8157193_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCGCTTATTATTAAATACATTATTTTGTATACTATTTCGTTTTGTTTTTGCGCCGACGATTGCCTTTGTCATTGTCGCGAACTTTCTTTCCCCTTAATTGTTGTTGTTGTGCTTTCAGTTTTTAATCTTTTTTATGCGACACACAAAGCAAAATCCTTGATCAGATAAACAACTTATAATCTCCATTGTTTGTTCACAGGTGGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
**************************************************....(((.((((..((((((...(((((((................(((((..((......))...)))))..............))))))).))))))...)))).)))....(((((((((.............))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 M053
female body
 O002
Head
 SRR553488
RT_0-2 hours eggs
 M023
head
.........................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGCGGC...... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGAGAAGAA.................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAG....................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGCG........ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAA..................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAATGCCGC............ 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGC...... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAA..................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGCAGA... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................CGCGAACTTTCTTTCCCC............................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................................AAGAATGCCGCCGCGGCA..... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................GAAGGAGAAGAATGCCGCCGC......... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................................................ATCTGAAGGAGAAGAATGCCG............. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................TGCCTTTGTCATTGTCGCGAACTTTC................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGTTCACAGGTGGATCTCGCCAAGGA................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGAGAAGAATGC............... 29 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGA........................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGA........................ 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAATGCCGC............ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGTTGTTGTTGTGCTTTGAGGTGT............................................................................................................................... 24 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................TGTTGTCAGCTTTTAATCTTTTTT.................................................................................................................... 24 3 2 0.50 1 0 0 0 0 0 0 0 0 0 0 1 0
........................................................................................................................................................................................CATTGTTTGTTCACAGA................................................. 17 1 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................TGTTGTTGTGCTTTGAG................................................................................................................................... 17 1 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................CCAAGGACCTGAAGGAG....................... 17 1 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................TGTTTGTTCACAGGG................................................ 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................TGCTGTTGTTGTGCTTTGAG................................................................................................................................... 20 2 8 0.13 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................GTTTTTGAGACGACGGTTG........................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................CAAAGCAGAATTCTTGAGC....................................................................................... 19 3 20 0.10 2 0 0 0 0 0 0 0 0 0 0 0 2
............................................GATTTTGCGCCGATGAT............................................................................................................................................................................................. 17 2 18 0.06 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................GGTATACGATTCCGTTTTG............................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................................................................................................................................GCCCCCGCGGCGGACG. 16 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

TAGCGAATAATAATTTATGTAATAAAACATATGATAAAGCAAAACAAAAACGCGGCTGCTAACGGAAACAGTAACAGCGCTTGAAAGAAAGGGGAATTAACAACAACAACACGAAAGTCAAAAATTAGAAAAAATACGCTGTGTGTTTCGTTTTAGGAACTAGTCTATTTGTTGAATATTAGAGGTAACAAACAAGTGTCCACCTAGAGCGGTTCCTAGACTTCCTCTTCTTACGGCGGCGCCGTCTGCA
**************************************************....(((.((((..((((((...(((((((................(((((..((......))...)))))..............))))))).))))))...)))).)))....(((((((((.............))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
.....................................................................................................................TCAGAAATTAGAAATAATA.................................................................................................................. 19 2 15 1.80 27 20 7 0 0 0
.....................................................................................................................TCAGAAATTAGAAATAATAAG................................................................................................................ 21 3 19 0.53 10 6 4 0 0 0
................................................................................TTGGAAGAAAGGGTAAGTAACA.................................................................................................................................................... 22 3 2 0.50 1 0 0 1 0 0
.....................................................................................................................TCAGAAATTAGAAATAATAAGC............................................................................................................... 22 3 8 0.25 2 2 0 0 0 0
.......................................................CTGCTAACGGGAAGAGTA................................................................................................................................................................................. 18 2 5 0.20 1 0 1 0 0 0
.........................................................................................................................................................TAGGAAGTAGGCTAGTTGTT............................................................................. 20 3 20 0.10 2 0 0 0 2 0
..................GTTATAAAGCATATGATA...................................................................................................................................................................................................................... 18 2 19 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:8156994-8157243 + dsi_13496 ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GCCGACGA---------------TTGCCTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TTT------------------------------T-------TATGCGACACACA--A-------AG-------------------CAAAAT-----CCTT-GATCA----------------GATAAA----------------------CAACTTATA----A-TCTCCATT--GTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
droSec2 scaffold_3:3926360-3926609 + dse_1183 ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GCCGACGA---------------TTGCCTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTTAGTTTTTAAT-CT----------------------------------------------TTT------------------------------T-------TATGCGACACACA--A-------AA-------------------CAAAAG-----CCTT-GATCA----------------GATAAA----------------------CAACTAATA----A-TCTCAATT--GTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
dm3 chr2L:8430084-8430330 + ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GC-------------------------CTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-AA----------------------------------------------TT------------------------------TTTTT--TTTATGCAACACACA--A-------AG-------------------CAAAAG-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----A-TTTCCATTGCGTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
droEre2 scaffold_4929:17338772-17339017 + ATCGC-----------------TTATTAT-------------------TACATTCATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----CTTGC-------------------------GCCGACGA---------------ATGCCT-T-GTCATTGTCGTGAAC-------TTTCT--------------TCCCCTTA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TT--------------------------------TTT--TG----CGACACAAA--A-------AG-------------------CAAAAT-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----T-TTTCCATT--GTTTT------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
droYak3 2L:11068081-11068327 + ATCGC-----------------TTTTTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTAC-------------------------GCCGACGG---------------ATGCCTTT-GTCATTGTCGTGAAC-------TTTCT------------TTTCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAGC-CT----------------------------------------------TTT------------------------------T-------TATGCGACACAAA--A-------A----------------------AAAA-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----T-TTTTCATT--GTTCG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGT
droEug1 scf7180000409461:455774-456001 + ATCGC-----------------TTATTA---------------------AAAAACATT-ATT-TT-----------------GTAT--------------TTGTTTTTA------TTTTTTAC-------------------------GCTGACAG----------------------------TTGTCGCGTCT-------CTTCT------------TTT-TCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTGTAAT-TT----------------------------------------------TTT------------------------------TTTT--GTCATTCAACACTTA--A-------AT-------------------AAAAA------TCTAAGAT-T----------------GATAAA----------------------TAATTAATA----T-CTTTC------TT-T------------T-TCGCTAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGT
droBia1 scf7180000301500:212358-212600 - ATCGC-----------------TTATTAT-------------------TAAGTACATT-ATT-TT-----------------GTAT--CCATC-------TTGATTTGT----T---TTTTGC-------------------------GCTGGCAA----------------------------TTGTCGCGAC--------TTTCT---------TATTTTCCCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTTCGAT-TT----------------------------------------------ACA---------------------------TTTTGTT--GGCATACAACATGGA--A-------TA-------------------TTATAA-----CTCAAAATCA----------------G-TAAA----------------------TAATAAATA----C-TTTTCTTT--GTT--------------T-TC-CCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGT
droTak1 scf7180000415629:147615-147864 + ATCGC-----------------TTATTAT-------------------CGAAAACATT-ATT-TT-----------------GTATA-CCATT-------TTATTTTGT----T----TTTGC-------------------------GCTGGCAA---------------T-----TT-GTCATTGTCGCGTTC-------TTTCT---------TTTTTTCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTCGAC-CT----------------------------------------------TT------------------------------TTTTT--TGCATACGACACAGA--A-------AG-------------------TAGGAT---TTTTTA-AACCATT--------------GATTAT----------------------TAACTT-------T-TTCCCATT--ATT-T------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGT
droEle1 scf7180000491186:1219761-1220031 + ATCGC-----------------TTATTAT-----------AT------TGAATACATT-ATTTTT-----------------GTATA-CCATT-------TTGTTTTGT----TTTTTTTTGC-------------------------GCTGGCGA---------------TTGCCTTTTGTCATTGTCGCGTCCATTTCCTCTTT-------------TTTTTTCTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTAAT-CT----------------------------------------------TT---------------------------------TT--TGCATACGA-ACCGA--T-------AG-------------------TGTTT-----ATTTA-AACCA----------------TATATAT---CA----------------TATCTAATA----A-------CA--TTTCATTCCTTTCGTCTT-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGT
droRho1 scf7180000771933:96849-97094 + ATCGC-----------------TTATTAT-------------------TAAATATATT-ATT-TT-----------------GTTTA-CCATT-------TTGTATTGT----T----CTTGC-------------------------GCTGGCGA---------------TTGCCTTT-TTCATTGTCGCGTCC------TTTTCT------------TTTTTCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TT---------------------------------TT--TGCATACGACACAGA--A-------TG-------------------TAATAG-----CTTA-AACCC----------------GATAAA----------------------TAACTAATA----T-TC-----C--GTTTA------------TCTC-ATAGGT---------GGATCTCGCAAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGT
droFic1 scf7180000454117:80701-80954 + ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CCATT-------TTGTTTTGT----T----TTTGC-------------------------GCCGGCAA---------------TTGCCTTT-GTGATTGTCGCGTCT-------TTTCT------------TTCTCCGTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TTT------------------------------TTTTTTTGCATACCACACAAA--A-------AG-------------------TACCAG-----TTAA-TACGA----------------GATAAA----------------------TAATTTATA----ATTTTACCTT--GTT-T------------T-TC-GCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGT
droKik1 scf7180000302412:563593-563850 + ATCGC-----------------TTAATATTATTAAAATACAT------TTAATACATTTATTTTT----------------GGCATAACCTTT-------TTGGATTGT----T----TT--------------------------------------------------------------ATTTGTCGCGTCC-------TTATTTATTTTGATTATTTTTTCCTAA----TTGTTGTTGTTGTGCTTTCAGTTGCTC---CA----------------------------------------------TT------------------------------CCTTT--TGCATACGACACACACAAAACTGAAAG-------------------TAA-TT-----CCTT-GTCT--------------------------------------------------AACTTCATT-ATTTCCTT--ATATA------------T-CC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGATGT
droAna3 scaffold_12916:10085238-10085475 + -TCGCTTACATT-------------------------------------------ATA-ATT-TT-----------------GTTT--TTATTTTTTT----AATTAA-------TTTTTTAG-------------------------GCTGG--A---------------ATGCCTTG-CTCATTGTTGAGTTT-------------------------------TAATTTTTTATTGTTGTTGTGCTCTCAGTTCTCATT-A--------------------------------------------------------------------------------ATTT--TGCATACCACACAGT--C-------TTTTATCCTTTTTTTTTTTAATAAAAA-----AA-------------------------------------------------------TTAATAAAA-----CAATTATCCTTTA------------T-TC-GCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGT
droBip1 scf7180000396580:950380-950610 - ATTTT-----------------TTG---------------------------------------------------------GTTT---AAATATTTTATTTATTTTTT----T----TAAAG-------------------------GCCGACAA-------------A-ATGCCTTG-TTTATTGTCGCCTTT------------------------------TTAATTCTTTATTGTTGTTGTGCTCTCAGTTCTCATT-AT---------------------------------------------------------------------------------TT--TGCATACGACACAGT--C-------TA-------------------TAGCAC-----CTT--------CCATTTGTA--ACCC----------------------------TTACTAATAGAG-----CCCATGTCCTTTA------------TTTC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGAGGT
dp5 4_group1:4081365-4081631 - ATTAA-----------------TTAATAT-------------------TGA-TTCATT-TTT-TG-----------------GTA---ACATT-------TTGTTTTGT----T----GTTGC-------------------------GTTGGCTGTGTGTCGATGGAGGATCCTCTTTGCTCCTCGTCGTCA--------TATACT------------TTCTCCTTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTTCC-CA----------------------------------------------CT------------------------------TTGTT--TGCCTAAAACACACACAAA-------A-------------------ACAAAC-----CAT--------CCATTTCTATGAATA----------------------------TATCTAATTCCGAC-ATTTC------TATA------------T-TTGCC---A---------GGATATCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACCA
droPer2 scaffold_5:1183133-1183399 + ATTAA-----------------TTAATAT-------------------TGA-TTCATT-TTT-TG-----------------GTA---ACATT-------TTGTTTTGT----T----GTTGC-------------------------GTTGGCTGTGTGTCGATGGAGGATCCTCTTTGCTCCTCGTCGTCA--------TATACT------------TTCTCCTTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTTCC-CA----------------------------------------------CT------------------------------TTGTT--TGCCTAAAACACACACAAA-------A-------------------ACAAAC-----CAT--------CCATTTCTATGAATA----------------------------TATCTAATTCCGAC-ATTTC------TATA------------T-TTGCC---A---------GGATATCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACCA
droWil2 scf2_1100000004945:320615-320925 + ATATT-TACATTGAAACTGCTTTTATTAT-------------------TA----CATT--TT-TT-----------------GTA---CTATT-------TTTTTTTTT----T----GTCGTCTCCATCCTTTGTACTTTTTTTTTTGTTTCTTA--------AGGTGAATTCTC-------------T-----------T---T-------------TTAACTTTAAAT-CATGTTGTTGTTGTGCTTTGAGTTTCTTTTCGTACCT---------------------CCCCCACTACTTAACTACATTGTTTATACATTATTAATCTTTTAATTGTCTTTTCTTT--AGCCCAGAGTATA-----------------------------------------------------------------------------------------------------CTAATT----A-------GA--TATCTTTCTTTTCTCTAT-TC-AT-TTA---------GGATATCACCAAGGATCTGAAGGAAAAGAATGCTGCGGCAGCAGATGT
droVir3 scaffold_12723:3026993-3027249 + dvi_1435 TTCCC--ATTCA----------TAAA-----------------------------------TTTT----------------GGTAT---CATTATTTTCGTTGTTTAAT----T----GTAAC-------------------------GTTGGCAA---------------AGGT-------CATTGCCA-----------T---TT------------GATATTTTAA----TTGTTGTTGTTGTGCTTTAAGTTGCTTTTCCTTTCGCTCTGTGTTCAT---------GCTCC-----------------TT------------------------------T-------AATTTGACATGAT--G-------T---------------------TAAAATGCGATTT------A--AATTTGCA--ACA-----A-----------------------ATGTTAATA-----------ACA--GTTTT------------T-TC-GCATGTGC--TTTTAGGATATCGCCAAGGATCTAAAGGAGAAGAACG---CCGCGGCAGATGT
droMoj3 scaffold_6500:6841146-6841443 - TCCGT-----------------ACTTTAT-----------TTTAATTTCGA-TTATTT-TTT-CGATACATTTATTTTTTTTCTAT---CATTATTTTCGTTGTTT-------------AATC-------------------------TTTGGCAA---------------GGC-------TCATTGCCA-----------T---TT------------AATCCATAAA----TTGTTGTTGTTGTGCTTTGAGTTGCTTTTTCTTCCTCCTTGTGTTCAT---------ATCCC-------------------------------------------------------------AAATCTATATTGA-------A-------------------TCAAAC-----AAT--------TGTTTCGTATAAACATATATGTATACATATATAAATGGCCAAATA-TTAATA----A-------AT--ATTCG------------T-TC-TTTTTA---------GGATATCGCTAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGATGT
droGri2 scaffold_15126:455714-456001 - TTCTT-CATTCT------------------------------------T---TAATTT-TTT-TT-----------------GTAT---CATT------GTTGTTTTTTTTATA-TTTGTTAC-------------------------GTTGGCAA---------------AGGT-------CATTGCCA-----------T---T-------------TTATCTTTAA----TTGTTGTTGTTGTGCTCTAAGTTGCTTAT-CTATCGCTCTGTGTTCTCTTATTCTCTCCTCCCGTGCTTAATATCATTTTT-------------------------------TTT--TTCGTTTAAATTTGA--A-------AG-------------------T----C-----GTCT-GAAAT----------------GTAAAT----------------------TAATTTACG----T-TT-----T--GTTTG---------TTTT-TC-GCATGTTTTATTTTAGGATATCGCTAAGGATCTAAAGGAGAAGAACG---CCGCGGCAGATGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GCCGACGA---------------TTGCCTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TTT------------------------------T-------TATGCGACACACA--A-------AG-------------------CAAAAT-----CCTT-GATCA----------------GATAAA----------------------CAACTTATA----A-TCTCCATT--GTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGCGGC......2712.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGAGAAGAA..................2711.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAG.......................1911.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGCG........2511.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAA.....................2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAATGCCGC............2611.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGC......2511.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAA.....................2511.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGCAGA...2811.00100000000000010000
............................................................................................................................................................................................CGCGAAC-------TTTCT------------TTCCCC..........................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATGCCGCCGCGGCA.....1811.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAAGAATGCCGCCGC.........2111.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAATGCCG.............2111.00100000000000100000
............................................................................................................................................................................TGCCTTT-GTCATTGTCGCGAAC-------TTTC.............................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGA.................................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGAGAAGAATGC...............2911.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGA........................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGA........................2011.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAATGCCGC............2511.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATT--GTTTG------------T-TC-ACAGA..........................................................1720.50100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTTTG------------T-TC-ACAGGG---------................................................1580.13100000001000000000
droSec2
ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GCCGACGA---------------TTGCCTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTTAGTTTTTAAT-CT----------------------------------------------TTT------------------------------T-------TATGCGACACACA--A-------AA-------------------CAAAAG-----CCTT-GATCA----------------GATAAA----------------------CAACTAATA----A-TCTCAATT--GTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................CTTAA----TTGTTGTTGTTGTGCTT.................................................................................................................................................................................................................................................................................................................................2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................GCGACACACA--A-------AA-------------------CAAAAG-----CCTT-GATCA----------------G.........................................................................................................................................2911.0011000
.................................................................................................................................................................................................................................TTAA----TTGTTGTTGTTGTGCT..................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAAGAATGCCGCCGC.........2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATCTGAAGGAGAAGAATGC...............2511.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAAGAATGC...............2711.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGAGAAGA...................2511.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAGAAGAATGC...............2611.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAATGC...............1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTGAAGGAGAAGA...................2011.0010100
...........................................................................................TT-------TCGTTTTGT----T----TTTGC-------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000
dm3
ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTGC-------------------------GC-------------------------CTTT-GTCATTGTCGCGAAC-------TTTCT------------TTCCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-AA----------------------------------------------TT------------------------------TTTTT--TTTATGCAACACACA--A-------AG-------------------CAAAAG-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----A-TTTCCATTGCGTTTG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATTGCGTTTG------------T-TC-ACAG...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGG.........................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------------T-TC-ACAGGT---------GGATCTCGCC......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................TTAA----TTGTTGTTGTTGTGCT..................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAATGCCG.............2411.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGAAGGAGAAGAAT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGCCAAGGATCTGAAGGA........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTGAAGGAGAAGAA..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAA...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAAGAATGCCGCCGCGGCAGAC..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAAGAATGCC..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG------------T-TC-ACAGGT---------GGATCTCG........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAAGAA..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GTTTTGT----T----TTTGC-------------------------GC-------------------------CTTT-GTCA...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TATT-------TCGTTTTGT----T----TTTGC-------------------------GC-------------------------............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAG.......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCGCCGCGGCAGA...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGAGAA.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTCATTGTCGCGAAC-------TTTCT------------T...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---------GGATCTCGCCAAGGATCTGAAGGAGC......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGAGAA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGCGGCA.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGT---------GGATCTCGCCAAGGATC...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAGAAGAA..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGG.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGCCAAGGATCTGAAGG.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAA.....................3511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATTGCGTTTG------------T-TC-ACA............................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAATGCCGCCGCGG.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGCCGCCGCGGCAGACG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTTGC-------------------------GC-------------------------CTTT-GTCATTGTCGCGAAC-------T................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GTTGTTGTGCTTTCAGTTTTTA.......................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGGATCTGAAGGAGAA.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATCTGAAGGAGA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAATGC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGGATCTGAAGGAGAAGAAT.................2611.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAAT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTG------------T-TC-ACAGGT---------GGATCT..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGT---------GGATCTCGCCAAGGAT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATCTGAAGGAGAAGAATGC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAATGCCGCCGCGGCC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGAATGCCGCCGCG........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAATGCCGCCGCGGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGG.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAAGAATGCCGCCGCGGCAGA...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAA.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................GTCGCGAAC-------TTTCT------------TTCCCCT.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAA..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA----A-TTTCCATTGCGTTTG------------T-TC-ACAC...........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGATCTGAAGGAGAAGAATGCCGC............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTGAAGGAGAAGAATGCC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA----A-TTTCCATTGCGTTTG------------T-..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAAGAATGCCGCCGC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCATTGTCGCGAAC-------TTTCT------------TTC.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCT------------TTCCCCTTAA----TTGTTGTT..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAAGAATGCCGCCGCG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAATGCCGCCGCGG.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTTTGT----T----TTTGC-------------------------GC-------------------------CTTT-GTC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGCAGA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGAGAAGAATGCCGCCGC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGAGAAG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATGCCGCCGCGGCAGACG.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAATGCCG.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAGAAGAATG................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGCCAAGGATCTGAAG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGT---------GGATCTCGCCAAGGATCTGAAGGAG.......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGGATCTGAAGGAGAAGA...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGAGA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TTGTCGCGAAC-------TTTCT------------TTC.............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAATGCCGCC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGT---------GGATCTCGCCAAGG..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATA-CTATT-------TCGTTTTGT----T----TTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAAGA...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATCGC-----------------TTATTAT-------------------TACATTCATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----CTTGC-------------------------GCCGACGA---------------ATGCCT-T-GTCATTGTCGTGAAC-------TTTCT--------------TCCCCTTA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TT--------------------------------TTT--TG----CGACACAAA--A-------AG-------------------CAAAAT-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----T-TTTCCATT--GTTTT------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATGCCGCCGCGGC......18110.001000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTGAAGGAGAAGAAT.................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAAT.................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAGAAGAATGC...............2611.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGA......................2011.0010000100
......................................................................................................................................................................................CATTGTCGTGAAC-------TTTCT--------------TCCCCTTA----TT................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCGCCAAGGATCTGAAGGAGAAGAA..................2811.0010000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAATGCCGC............2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAATGC...............2211.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAA.....................2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGCCAAGGATCTGAAGGA........................2111.0011000000
droYak3
ATCGC-----------------TTTTTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CTATT-------TCGTTTTGT----T----TTTAC-------------------------GCCGACGG---------------ATGCCTTT-GTCATTGTCGTGAAC-------TTTCT------------TTTCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAGC-CT----------------------------------------------TTT------------------------------T-------TATGCGACACAAA--A-------A----------------------AAAA-----CCTT-GACCA----------------GATAAA----------------------CAACTAATA----T-TTTTCATT--GTTCG------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATGCCGCCGCGGCAGACGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGAAGGAGAAGAATGC...............2612.00200000000002
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAATGC...............1911.00100000010000
....................................................................................ATA-CTATT-------TCGTTTTGT----T----T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCCAAGGATCTGAAGGA........................2011.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATGCCGCCGCGGCAGA...2811.00100100000000
............................................................................................................................................................................TGCCTTT-GTCATTGTCGTGAAC-------TTTCT------------................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................GTTGTTGTTGTGCTTTCAGT............................................................................................................................................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATGCCGCCGCGGCAGAC..2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAATGCCGCCGC.........2311.00101000000000
..................................................................................GTATA-CTATT-------TCGTTTTGT----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
ATCGC-----------------TTATTA---------------------AAAAACATT-ATT-TT-----------------GTAT--------------TTGTTTTTA------TTTTTTAC-------------------------GCTGACAG----------------------------TTGTCGCGTCT-------CTTCT------------TTT-TCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTGTAAT-TT----------------------------------------------TTT------------------------------TTTT--GTCATTCAACACTTA--A-------AT-------------------AAAAA------TCTAAGAT-T----------------GATAAA----------------------TAATTAATA----T-CTTTC------TT-T------------T-TCGCTAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droBia1
ATCGC-----------------TTATTAT-------------------TAAGTACATT-ATT-TT-----------------GTAT--CCATC-------TTGATTTGT----T---TTTTGC-------------------------GCTGGCAA----------------------------TTGTCGCGAC--------TTTCT---------TATTTTCCCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTTCGAT-TT----------------------------------------------ACA---------------------------TTTTGTT--GGCATACAACATGGA--A-------TA-------------------TTATAA-----CTCAAAATCA----------------G-TAAA----------------------TAATAAATA----C-TTTTCTTT--GTT--------------T-TC-CCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droTak1
ATCGC-----------------TTATTAT-------------------CGAAAACATT-ATT-TT-----------------GTATA-CCATT-------TTATTTTGT----T----TTTGC-------------------------GCTGGCAA---------------T-----TT-GTCATTGTCGCGTTC-------TTTCT---------TTTTTTCCCTTAA----TTGTTGTTGTTGTGCTTTCAGTTTTCGAC-CT----------------------------------------------TT------------------------------TTTTT--TGCATACGACACAGA--A-------AG-------------------TAGGAT---TTTTTA-AACCATT--------------GATTAT----------------------TAACTT-------T-TTCCCATT--ATT-T------------T-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droEle1
ATCGC-----------------TTATTAT-----------AT------TGAATACATT-ATTTTT-----------------GTATA-CCATT-------TTGTTTTGT----TTTTTTTTGC-------------------------GCTGGCGA---------------TTGCCTTTTGTCATTGTCGCGTCCATTTCCTCTTT-------------TTTTTTCTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTAAT-CT----------------------------------------------TT---------------------------------TT--TGCATACGA-ACCGA--T-------AG-------------------TGTTT-----ATTTA-AACCA----------------TATATAT---CA----------------TATCTAATA----A-------CA--TTTCATTCCTTTCGTCTT-TC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droRho1
ATCGC-----------------TTATTAT-------------------TAAATATATT-ATT-TT-----------------GTTTA-CCATT-------TTGTATTGT----T----CTTGC-------------------------GCTGGCGA---------------TTGCCTTT-TTCATTGTCGCGTCC------TTTTCT------------TTTTTCCTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TT---------------------------------TT--TGCATACGACACAGA--A-------TG-------------------TAATAG-----CTTA-AACCC----------------GATAAA----------------------TAACTAATA----T-TC-----C--GTTTA------------TCTC-ATAGGT---------GGATCTCGCAAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droFic1
ATCGC-----------------TTATTAT-------------------TAAATACATT-ATT-TT-----------------GTATA-CCATT-------TTGTTTTGT----T----TTTGC-------------------------GCCGGCAA---------------TTGCCTTT-GTGATTGTCGCGTCT-------TTTCT------------TTCTCCGTAA----TTGTTGTTGTTGTGCTTTCAGTTTTTAAT-CT----------------------------------------------TTT------------------------------TTTTTTTGCATACCACACAAA--A-------AG-------------------TACCAG-----TTAA-TACGA----------------GATAAA----------------------TAATTTATA----ATTTTACCTT--GTT-T------------T-TC-GCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGTSizeHit CountTotal NormTotal
No Reads
droKik1
ATCGC-----------------TTAATATTATTAAAATACAT------TTAATACATTTATTTTT----------------GGCATAACCTTT-------TTGGATTGT----T----TT--------------------------------------------------------------ATTTGTCGCGTCC-------TTATTTATTTTGATTATTTTTTCCTAA----TTGTTGTTGTTGTGCTTTCAGTTGCTC---CA----------------------------------------------TT------------------------------CCTTT--TGCATACGACACACACAAAACTGAAAG-------------------TAA-TT-----CCTT-GTCT--------------------------------------------------AACTTCATT-ATTTCCTT--ATATA------------T-CC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGATGTSizeHit CountTotal NormTotal
No Reads
droAna3
-TCGCTTACATT-------------------------------------------ATA-ATT-TT-----------------GTTT--TTATTTTTTT----AATTAA-------TTTTTTAG-------------------------GCTGG--A---------------ATGCCTTG-CTCATTGTTGAGTTT-------------------------------TAATTTTTTATTGTTGTTGTGCTCTCAGTTCTCATT-A--------------------------------------------------------------------------------ATTT--TGCATACCACACAGT--C-------TTTTATCCTTTTTTTTTTTAATAAAAA-----AA-------------------------------------------------------TTAATAAAA-----CAATTATCCTTTA------------T-TC-GCAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGACGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGAACG---CCGCGGCAGAC..2311.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAACG---CCGCGGCA.....2411.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAAGAACG---CCGCGGCAGAC..2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGCCAAGGATCTGAAGGG........................2311.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAACG---CCGCGGCAGAC..2011.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAACG---CCGCGGC......2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAACG---CCGCGGCAGA...2511.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAACG---CC...........2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAACG---CCGCG........2411.001100000
droBip1
ATTTT-----------------TTG---------------------------------------------------------GTTT---AAATATTTTATTTATTTTTT----T----TAAAG-------------------------GCCGACAA-------------A-ATGCCTTG-TTTATTGTCGCCTTT------------------------------TTAATTCTTTATTGTTGTTGTGCTCTCAGTTCTCATT-AT---------------------------------------------------------------------------------TT--TGCATACGACACAGT--C-------TA-------------------TAGCAC-----CTT--------CCATTTGTA--ACCC----------------------------TTACTAATAGAG-----CCCATGTCCTTTA------------TTTC-ACAGGT---------GGATCTCGCCAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGAGGTSizeHit CountTotal NormTotal
No Reads
dp5
ATTAA-----------------TTAATAT-------------------TGA-TTCATT-TTT-TG-----------------GTA---ACATT-------TTGTTTTGT----T----GTTGC-------------------------GTTGGCTGTGTGTCGATGGAGGATCCTCTTTGCTCCTCGTCGTCA--------TATACT------------TTCTCCTTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTTCC-CA----------------------------------------------CT------------------------------TTGTT--TGCCTAAAACACACACAAA-------A-------------------ACAAAC-----CAT--------CCATTTCTATGAATA----------------------------TATCTAATTCCGAC-ATTTC------TATA------------T-TTGCC---A---------GGATATCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAATG---CCGCGGCA.....2412.0020100000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGA........................1812.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAGAAGAATG---CCGCGGCA.....2612.0020000000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAATG---CCGCGGCA.....2711.0010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAGAAGA...................2311.0010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------GGATATCGCCAAGGATCTGAAGGAG.......................2611.0010000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTGAAGGAG.......................1911.0010100000000
....................................................................................................TTGTTTTGT----T----GTTGC-------------------------GTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCAAGGATCTGAAGGAGA......................2411.0010100000000
........................................................................................................TTTGT----T----GTTGC-------------------------GTTGGCTGTGTGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAGAAGAATG---CCGCGGC......2311.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCAAGGATCTGAAGGA........................2011.0010100000000
droPer2
ATTAA-----------------TTAATAT-------------------TGA-TTCATT-TTT-TG-----------------GTA---ACATT-------TTGTTTTGT----T----GTTGC-------------------------GTTGGCTGTGTGTCGATGGAGGATCCTCTTTGCTCCTCGTCGTCA--------TATACT------------TTCTCCTTAA----TTGTTGTTGTTGTGCTTTAAGTTTTTTCC-CA----------------------------------------------CT------------------------------TTGTT--TGCCTAAAACACACACAAA-------A-------------------ACAAAC-----CAT--------CCATTTCTATGAATA----------------------------TATCTAATTCCGAC-ATTTC------TATA------------T-TTGCC---A---------GGATATCGCCAAGGATCTGAAGGAGAAGAATG---CCGCGGCAGACCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAATG---CCGCGGCA.....2312.002200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAATG---.............1912.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGGATCTGAAGGAGAAG....................2312.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCAAGGATCTGAAG..........................2011.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGAAGAATG---CCGCGGCA.....2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGAATG---CCGCGGCAGACCA2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATCTGAAGGAGAAGAATG---CCGCGGCA.....2911.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCAAGGATCTGAAGGAGAAGA...................2711.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGAATG---CCGCGGCAGAC..2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAATG---CCGCGGCA.....2711.001000001
.........................................................................................................................................................................GATCCTCTTTGCTCCTCGTC..............................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.........................................................................................................................................................................GATCCTCTTTGCTCCTCGTCGTC...........................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGAATG---CCGCGGC......1911.001010000
droWil2
ATATT-TACATTGAAACTGCTTTTATTAT-------------------TA----CATT--TT-TT-----------------GTA---CTATT-------TTTTTTTTT----T----GTCGTCTCCATCCTTTGTACTTTTTTTTTTGTTTCTTA--------AGGTGAATTCTC-------------T-----------T---T-------------TTAACTTTAAAT-CATGTTGTTGTTGTGCTTTGAGTTTCTTTTCGTACCT---------------------CCCCCACTACTTAACTACATTGTTTATACATTATTAATCTTTTAATTGTCTTTTCTTT--AGCCCAGAGTATA-----------------------------------------------------------------------------------------------------CTAATT----A-------GA--TATCTTTCTTTTCTCTAT-TC-AT-TTA---------GGATATCACCAAGGATCTGAAGGAAAAGAATGCTGCGGCAGCAGATGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAAAAGAATGCTGCGGCAGC......2613.00310200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAAAAGAATGCTGCGGC.........2312.00200200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAGGATCTGAAGGAAAAGAAT.................2511.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCACCAAGGATCTGAAGGAA.......................2311.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAAAAGAATGCTGCGGC.........2611.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAAAGAATGCTGCGGCAGCAGAT..2811.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAAAAGAATGCTGC............2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCACCAAGGATCTGAAG..........................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAATGCTGCGGCAGCAGAT..2211.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAAAAGAATGCTGCGGC.........2511.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAAAAGAATGCTGC............1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGAAAAGAATGCTGCGA..........2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAAAGAATGCTGCGGCAGC......2411.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAGGATCTGAAGGAAAA.....................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAAGGAAAAGAATGCTGCG...........2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAATGCTGCGGCAGCAGAT..2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTGAAGGAAAAGAATGCTGC............2711.00100100
droVir3
TTCCC--ATTCA----------TAAA-----------------------------------TTTT----------------GGTAT---CATTATTTTCGTTGTTTAAT----T----GTAAC-------------------------GTTGGCAA---------------AGGT-------CATTGCCA-----------T---TT------------GATATTTTAA----TTGTTGTTGTTGTGCTTTAAGTTGCTTTTCCTTTCGCTCTGTGTTCAT---------GCTCC-----------------TT------------------------------T-------AATTTGACATGAT--G-------T---------------------TAAAATGCGATTT------A--AATTTGCA--ACA-----A-----------------------ATGTTAATA-----------ACA--GTTTT------------T-TC-GCATGTGC--TTTTAGGATATCGCCAAGGATCTAAAGGAGAAGAACG---CCGCGGCAGATGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGAAGAACG---CCGCGGC......2113.003100000010000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAGAAGAACG---CCGCGGC......2312.002200000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAGAAGAACG---CCGCGGCA.....2412.002100000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAGAAGAACG---CC...........1812.002000000020000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTAAAGGAGAAGAA..................2411.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAAGGATCTAAAGGAGAA.....................2111.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGATCTAAAGGAGAAGAAC.................2211.001000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCGCCAAGGATCTAAAGGAGAA.....................2611.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCAAGGATCTAAAGGAGA......................2411.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................GTTGTTTAAT----T----GTAAC-------------------------GTT....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGAACG---CCGCGGCAGATG.2111.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCAAGGATCTAAAGGAGAAGAACG---.............2711.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAGAAGAACG---CCGCGGC......2011.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--TTTTAGGATATCGCCAAG...................................2011.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATCGCCAAGGATCTAAAGGAGAAGA...................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATCGCCAAGGATCTA.............................2011.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAGAAGAACG---CCGC.........2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGAGAAGAACG---CCGCGG.......2211.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAGAACG---CCGCGGC......1811.001000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTAAAGGAG.......................1811.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAAGGAGAAGAACG---CCGCGGC......2411.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACG---CCGCGGCAGA...1811.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCCAAGGATCTAAAGGAGAAGAAC.................2711.001000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCGCCAAGGATCTAAAGGAGAA.....................2511.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TATTTTAA----TTGTTGTTGTTGT.....................................................................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................TATTTTAA----TTGTTGTTGTT.......................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000100000000000000000000000000000000000000
droMoj3
TCCGT-----------------ACTTTAT-----------TTTAATTTCGA-TTATTT-TTT-CGATACATTTATTTTTTTTCTAT---CATTATTTTCGTTGTTT-------------AATC-------------------------TTTGGCAA---------------GGC-------TCATTGCCA-----------T---TT------------AATCCATAAA----TTGTTGTTGTTGTGCTTTGAGTTGCTTTTTCTTCCTCCTTGTGTTCAT---------ATCCC-------------------------------------------------------------AAATCTATATTGA-------A-------------------TCAAAC-----AAT--------TGTTTCGTATAAACATATATGTATACATATATAAATGGCCAAATA-TTAATA----A-------AT--ATTCG------------T-TC-TTTTTA---------GGATATCGCTAAGGATCTGAAGGAGAAGAACG---CCGCGGCAGATGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTAAGGATCTGAAGGAGAA.....................2211.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGAACG---CCGCGGC......1911.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAAGGAGAAGAACG---CCGCGGC......2611.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGGATCTGAAGGAGAAGA...................2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAGGATCTGAAGGAGAAGAAC.................2511.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGAGAAGAACG---CCGC.........1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGATCTGAAGGAGAAGAACG---CCGC.........2611.001000100
droGri2
TTCTT-CATTCT------------------------------------T---TAATTT-TTT-TT-----------------GTAT---CATT------GTTGTTTTTTTTATA-TTTGTTAC-------------------------GTTGGCAA---------------AGGT-------CATTGCCA-----------T---T-------------TTATCTTTAA----TTGTTGTTGTTGTGCTCTAAGTTGCTTAT-CTATCGCTCTGTGTTCTCTTATTCTCTCCTCCCGTGCTTAATATCATTTTT-------------------------------TTT--TTCGTTTAAATTTGA--A-------AG-------------------T----C-----GTCT-GAAAT----------------GTAAAT----------------------TAATTTACG----T-TT-----T--GTTTG---------TTTT-TC-GCATGTTTTATTTTAGGATATCGCTAAGGATCTAAAGGAGAAGAACG---CCGCGGCAGATGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 06:33 PM