ID:dsi_13467 |
Coordinate:3r:4254998-4255126 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_4254572_4254997_-]; CDS [3r_4254572_4254997_-]; CDS [3r_4255127_4256296_-]; exon [3r_4255127_4256296_-]; intron [3r_4254998_4255126_-]
No Repeatable elements found
| ##################################################---------------------------------------------------------------------------------------------------------------------------------################################################## GACAGCACGTCATTGTGCAGCAGCAGCAACCCACCAATGTCATCGGCAATGTAAGTGTATAAATTATGTTTTGCGAAGGTTTTGCCAAATATTATTGGCAATATACATCGTAAATCTCTTTTCCCCACGGCCATTATGTTGCAATATGTCAAAATCTAACCATATTTGTCTCTTATTAGTCCCAACAGCAGACCATCATTCGGCCCGTTATGACCAACGTGAGCGGAGG **************************************************.............(((......((((((((((((.((.....((((.((((((((..((((...............))))....)))))))))))))).))))))))........)))).......)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR902009 testis |
M025 embryo |
SRR902008 ovaries |
SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................ACCAATGTCATCGGCAAT................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ...............................CACCAATGTCATCGGCAAT................................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .............TGTGCAGCAGAACCAACCC..................................................................................................................................................................................................... | 19 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .............TGTGCAGCAGAACCAACCCCC................................................................................................................................................................................................... | 21 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............TGTGCAGCAGAACCAACCCG.................................................................................................................................................................................................... | 20 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .............TGTGCAGCAGAACCAACCCC.................................................................................................................................................................................................... | 20 | 3 | 13 | 0.15 | 2 | 0 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................................TTATTCCAAATATTTTTGGCAA................................................................................................................................ | 22 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .............................................................................................................GTAAAGCTCTTTTCCCG....................................................................................................... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
CTGTCGTGCAGTAACACGTCGTCGTCGTTGGGTGGTTACAGTAGCCGTTACATTCACATATTTAATACAAAACGCTTCCAAAACGGTTTATAATAACCGTTATATGTAGCATTTAGAGAAAAGGGGTGCCGGTAATACAACGTTATACAGTTTTAGATTGGTATAAACAGAGAATAATCAGGGTTGTCGTCTGGTAGTAAGCCGGGCAATACTGGTTGCACTCGCCTCC
**************************************************.............(((......((((((((((((.((.....((((.((((((((..((((...............))))....)))))))))))))).))))))))........)))).......)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................CAGAGAATACTCAGGGGTG........................................... | 19 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................GGGCAATATTGGTACCAC........ | 18 | 3 | 20 | 0.40 | 8 | 0 | 8 | 0 | 0 | 0 |
| ............................................................................................................................................................................AATTCTCAGGGTTGTCGT....................................... | 18 | 2 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................TTAGAGACAAAAGGTGCCGGT................................................................................................ | 21 | 3 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................................................AGTAAGCCGGGCACT................... | 15 | 1 | 9 | 0.11 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................GTCGTCGTCGTCGGGTGGT................................................................................................................................................................................................. | 19 | 1 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 |
Generated: 04/23/2015 at 11:24 PM