ID:

dsi_13453

 Coordinate:

2r:12326911-12327060 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.8 -24.2

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTGGCAAAATTTACTAAAACCATTTTCTGCTCGTTATACCCCGCCCACGTGAGCAACTAAATGAAAACTATTTGGCAAATGTGGCTGCATAAAACATTTAGCATAGCTTAGGTTACTCTACACCCTGCTCTAAGCATATATATATATTGTGTGCTGCCCGTGTATATATACCGATTTCTCTGTGCTGTGTACATATGTAGGTCGTAATGTAAGGTACCAACAACAACAGCAGCAGCAATACAACAATCAA
*************************************************************************************........((((..(((((((....(((.....(((((...((....((((((((.......))))))))))..))))).....))).......))))))))))).....******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 O002
Head
.....................................................................................TGCATAAAACATTTAGCATAGCTTAGGT......................................................................................................................................... 28 0 1 5.00 5 1 4 0 0 0 0 0
......................................................................................................................................................................................TGCTGTGTACATATGTAGGTCGTAATG......................................... 27 0 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................................................................................................................TGTGTACATATGTAGGTCGTAATGTA....................................... 26 0 1 2.00 2 2 0 0 0 0 0 0
..................................................................................................................................................................................TCTGTGCTGTGTACATATGTAGGT................................................ 24 0 1 2.00 2 1 1 0 0 0 0 0
.....................................................................................................................................................................................................TAGGTCGTAATGTAAGGTACCAACAAC.......................... 27 0 1 2.00 2 2 0 0 0 0 0 0
.............................................................................................................................................................................................TACATATGTAGGTCGTAATGTAAGG.................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................TATGTAGGTCGTAATGTAAGGTACC................................ 25 0 1 2.00 2 2 0 0 0 0 0 0
........................................................................................................................................................................TACCGATTTCTCTGTGCTGTGTACATA....................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TAGCTTAGGTTACTCTACACCCTGC.......................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................................................................................TATATACCGATTTCTCTGTGCTGT.............................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................................................................................TTCTCTGTGCTGTGTACATATGTAGGT................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACCTCAGCAGCAATACAACAATCAA 25 2 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................TATATACCGATTTCTCTGTGCTGTGTA........................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................CATATGTAGGTCGTAATGTAAGGTAC................................. 26 0 1 1.00 1 0 0 0 1 0 0 0
..........................................................................................................................................................TGCCCGTGTATATATACCGATTTCTCTGT................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGTAGGTCGTAATGTAAGGTACCAAC............................. 26 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................TATGTAGGTCGTAATGTAAGGTACCA............................... 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................CTGCATAAAACATTTAGCATAGCTTAGG.......................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................TGAAAACTGTTTGGCAAATGTGGC..................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................TCTGTGCTGTGTACATATGTAGGTCGTA............................................ 28 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................TACATATGTAGGTCGTAATGTAAGGTACCA............................... 30 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................TTAGCATAGCTTAGGTTACTCTACA................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGGTCGTAATGTAAGGTACCAACAAC.......................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................TATGTAGGTCGTAATGTAAGGTACCAAC............................. 28 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................TACCGATTTCTCTGTGCTGTGTACAT........................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................TTGGCAAATGTGGCTGCATAAAACATT........................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................ATACCGATTTCTCTGTGCTGT.............................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
.........................TCTGCTCGTTATACCCCGCCCACGTG....................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................TGTGCTGTGTACATATGTAGGTCGTAA........................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................TACTCTACACCCTGCTCTAAGCATA................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TGGCAAATGTGGCTGCATAAAACATT........................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................TGTACATATGTAGGTCGTAATGTA....................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGTAGGTCGTAATGTAAGGTACCAACAAC.......................... 29 0 1 1.00 1 1 0 0 0 0 0 0
...........TACTAAAACCATTTTCTGCTCGTTA...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................ACATATGTAGGTCGTAATGTAAGGTACC................................ 28 0 1 1.00 1 0 0 0 1 0 0 0
..................................................................................................................................................................................TCTGTGCTGTGTACATATGTAGGTCGT............................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................CAAGGTCGTAATGTAAGGTACC................................ 22 2 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................................................................................................ACCGATTTCTCTGTGCTGTG............................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0
.............................................................TGAAAACTATTTGGCAAATGTGGCA.................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................TATATGGCAAATGTGG...................................................................................................................................................................... 16 1 18 0.33 6 0 0 0 0 0 6 0
..............................................................................................................................................................................................................................ACAATAGCAGCAGCAATA.......... 18 1 12 0.08 1 0 0 0 0 0 0 1
....................................................................TATTTGGCTAATGTGGAT.................................................................................................................................................................... 18 2 15 0.07 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CTGTAAGGCACCAACAA........................... 17 2 18 0.06 1 1 0 0 0 0 0 0

Anti-sense strand reads

CACCGTTTTAAATGATTTTGGTAAAAGACGAGCAATATGGGGCGGGTGCACTCGTTGATTTACTTTTGATAAACCGTTTACACCGACGTATTTTGTAAATCGTATCGAATCCAATGAGATGTGGGACGAGATTCGTATATATATATAACACACGACGGGCACATATATATGGCTAAAGAGACACGACACATGTATACATCCAGCATTACATTCCATGGTTGTTGTTGTCGTCGTCGTTATGTTGTTAGTT
*******************************************************........((((..(((((((....(((.....(((((...((....((((((((.......))))))))))..))))).....))).......))))))))))).....************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M024
male body
...........................................................TTACTTTTTAGAAACCGTTTA.......................................................................................................................................................................... 21 2 2 1.00 2 2 0 0 0 0 0 0 0
.............................GAGCCAGATGGGGCGGGTG.......................................................................................................................................................................................................... 19 2 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................GGGGGAAGAGATTCGTCTA............................................................................................................... 19 3 16 0.25 4 3 0 0 0 0 0 1 0
.............................................................................................................TCCAATAAGATGTCTGACGA......................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................................................................TAGGTATATATAACACAC................................................................................................. 18 2 20 0.25 5 0 0 0 0 4 0 0 1
...........................................................TTACTTTTGTAGAACCGTTTAC......................................................................................................................................................................... 22 3 6 0.17 1 0 0 1 0 0 0 0 0
...........................................................TTACTTTTTAGAAACCGTTT........................................................................................................................................................................... 20 2 7 0.14 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................CGGGCTCATATATATGC.............................................................................. 17 2 8 0.13 1 0 0 0 1 0 0 0 0
..........................................................................................................................GGGAAGAGATTCGTCTA............................................................................................................... 17 2 9 0.11 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TTGTTGTCGTCGTCGTT............ 17 0 20 0.05 1 0 0 0 0 0 1 0 0
......................................................TTGATTTACGCTTGAAAAAC................................................................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................TCCAATTCGATGTGGGGC........................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................TGTTGTTGTCGTCGTCGT............. 18 0 20 0.05 1 0 0 0 0 0 1 0 0
............................................................................................................................................................................................................................GTTGTTGTCGTCGTCGT............. 17 0 20 0.05 1 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:12326861-12327110 - dsi_13453 G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACCCTGC---------TCT----------------AAGCA---T---------------ATA-------------TATAT--ATTGTGTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAACA---------GCAGCAGCAATACAAC-------AATCAA------
droSec2 scaffold_1:9154294-9154549 - G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CC----CAC-GTCAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACCCTGC---------TCT----------------AAGCA---TATATAT---------ATA-------------TATAT--ATTGTGTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAACA---------GCAGCAGCAATACAAC-------AATCAA------
dm3 chr2R:11660703-11660968 - G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCT---------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACATTGC---------TCT----------------AAGCA---TATATAT--A---TAAATA-------------TGTAT--ATTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAGCAACAACA---GCAGCAGCAATACAAC-------AATCAG------
droEre2 scaffold_4845:14201977-14202203 + C-TGGCGAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ACA---CCCCG---------------------------CC----CTC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA---TTAGCA-TAGCTTAGGT-TACTCTAC---CT---------------------------------------ATACTC---------GCA-------------CATAT--TTTGTCTGCTGCCCGTGT----ATAT--ACATATGCCCA------TTT------C------------------------------TCTGTGCCCTGTATG-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------GCAGCAGCA----------------------------------------GCAG
droYak3 2R:17326324-17326581 + C-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTTTTATA---CCCCG-A-------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACA------------------------------------------TATA-TCGTAC--TATAGAACCTACATACCTATATAT--TTTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAGC---------------AGCAGTACAAC-------AATCAG------
droEug1 scf7180000409672:559696-559971 - C-TGGCGAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CCCCCACAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACTCTACACTC------AC----TCTACCTATCTATCTATCTAT-----CTATATAT---------ATA-------------TGTAT--ATTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGC------------AACAGCAATACAAC-------AATCAGCAACAG
droBia1 scf7180000302292:3997758-3998018 + C--GGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTC-TAA---CCCCG---------------------------CC----CCT-GTGAGCAAC-TCAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACG--TTTAGCA-TAGCTTAGGT-TACTCTACACCCCGCCATCTACAATCT----------------ATG------GT------ACACTTTAT---------------GTATTTCATGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCCGTGTACA-T--------------ATGTAGGTCGTAATG------TG---AGGTACC--A----------------------------------------------------------------GCAGCAG------------CAGCAGCAGTACAAC-------AATCAG------
droTak1 scf7180000415241:19363-19635 + C-TGGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTT-AAA--CCCCCG---------------------------CC----CAT-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACG--TTTAGCA-TAGTTTAAGT-TACTCTACACTCT-----ATACACTCT----------------ATACACCCTATA------CACTATATA-------------TATGT--TTTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCCGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCA------GCAACAGCAATACAAC-------AATCAG---CAA
droEle1 scf7180000491107:640270-640520 - C-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------TT----CAC-GTGAGCAACTTAAATGA-AAACTATTTGGCAAATGTGGTTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACACTACACTCT---------------------------------------ATATAT---------ATA-------------TATAT--ATTGTCTGCTGCCTGTGTGT--ATAT--ATA----CCAA------TCT------T------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCA------GCATCAGCAGTACAAC-------AATCAG------
droRho1 scf7180000779911:451695-451928 + T-TGGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTT--AAA---CCCCG---------------------------TC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACACT-----------------------------------------------------------TTATA-------------TATAT--ATTGTCTGCTGCTCGTGTGT--ATAT--ATA----CC-A------TTT------A------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCA---------GCAGCAGCAGTACAAC-------AATCAG------
droFic1 scf7180000453809:155184-155457 - C-TTGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTTTACA---CCCCG---------------------------CC----CAT-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--CTCAGCA-TAGTTTAAGT-TACCCTACACAAC---------------------------------------AG------ACACCTTAGA-------------TATAT--AGTGTCTGCTGCCTCTGTA--TATAT--ATA----CCGATACCAATTCATCTGTG------------------------------TGTGTGCTGTGTACA-TAT------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCAGCAGCAATATCAGCAGTACAAC-------AATCAG------
droKik1 scf7180000302682:1835586-1835839 - T-TGGCGAAATTTACT-------A-AACAATTTTCC-GCTCGTT--ATA---CCTCCCATG---CCCCTGCC-CCCTGTGATCGCCCC--CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAACTGTGGCTGCATAAAGCA--TTTAGCACTAGACTA--T-TAG---ACA--CT-----AC----CCTACAT---------------TA---T---------------ATA-------------TATAT--ACTATATG--------------------------------------TT------C------------------------------TC-ATGCTGTGT-------------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------GCAGCAGCAGCAACAGCAGCAGCAGCAGTACAGT-------ACTCAG---CAG
droAna3 scaffold_13266:12539603-12539826 + A-TGGCGAAATTTACT-------A-AACAATTCTCT--CTCGCT--C-----CCCCG------------------------------------------ACAC-TAAATGCAAAACTATTTGGCAAATGTGGCTGCAGAAAACA--CTTAGCA-TAGTTTAAGCCTCCTCTG----------------------------------------------------------------------------TATA-------------GACCGTCT----GTAT--ATA--------------TCT------C------------------------------TGTGTGCTGTGTACA-T--------------ATGTAGGCCGTAATG------TG---AGGTACC--CACCACA--------------G---CAACAACACCA-----------------------------CCAGCAGCAACA------GCAGCAGCAGTACAAC-------ACTCAG------
droBip1 scf7180000396372:39489-39732 + A-TGGCGAAATTTACT-------A-AACAATTCTCT-A--------------TCTTG---------------------------CT----CCC-CTG--AAAC-TGAATGCAAAACTATTTGGCAAATGTGGCTGCAGAAAACA--CTTAGCA-TAGTTTAAGC-C--TCCAC------------------------------------------------------------------------------------TGTCTATAGACCGTCTGTATGTAT--A--------TA------TCT------T------------------------------TGTGTGCTGTGTACA-T--------------ATGTAGGCCGTAATGTGAATGTG---AGGTACC--AGCCACA--------------G---CAACAGCAACA----C-------------------------CAGCAGCAGCAGCAGCAACAGCAGCAGTACAAC-------ACTCAG------
dp5 3:19524043-19524362 + TTTGGCAAAATTTACTGAGAGCTAAAACAATTCTAT-G---GTT--ATATT-CCTCG-ACGGAACGCCTGAACCCCT--AAACAACTG--CATACTGTGCACG-TAAATGAGAAACTATTTGGCAAATGTGGCTGCAGCAAAGAATTTTGGCA-TAGTTTAAGT-TAC---ACACTCT-----AT----CCTGCATATATACATATAT---------------------------------------------------------AACTATAT----ATAT--ATA----TCTA------TCT----ATA------------------------------TCTATGCTGTATATA-TAT--ATATATACACATGTAGGTCGTAATG------TA---AGATACC--AACAACA--------------A------CAGC----AACACTAT------CAGCAACAACAATAC-CAACAACAACA---------------A------CAGCAGCTG----CAGCAG
droPer2 scaffold_37:526267-526603 + TTTGGCAAAATTTACTGAGAGCTAAAACAATTCTAT-G---GTT--ATATT-CCTCG-ACGGAACGCCTGAACCCCT--GAACAACTG--CATACTGTGCACG-TAAATGAGAAACTATTTGGCAAATGTGGCTGCAGCAAAGAATTTTGGCA-TAGTTTAAGT-TAC---ACACTCT-----AT----CCTGCATATATACATATAT---------------------------------------------------------AACTATAT----ATAT--ATA----TCTA------TCT----ATA------------------------------TCTATGCTGTATATA-TATATATATATACACATGTAGGTCGTAATG------TA---ACATACC--AACAACAACAGA-AAC-CCCAA---CAACAGC----AACACTAT------CAGCAACAACAATAC-CAACAACAACA---------------A------CAGCTGCTG----CAGCAG
droWil2 scf2_1100000004512:926182-926385 + --------------------------------------------------------------------------------------------------------TAAATGA-GAATCATTTGGCAGCT--TATTGCATA-----------------TCGTGAG-----------------------------------------AAA---------------------------------------------------------TTTCCATATGTATATAT--ATA----TCTA------T--------ACCTACCCAAAATACTACTACTACTATATCCCCCAAACTATGTATGTT--------------GTGTAGGTCGTAATG------TA---AGGTACC--AGCAACA--------------A---CAACAACAACA----CCAACATAATTAC-------------CAACAACAACA---------------ACAATATCAGCAGCAG----CAGCAG
droVir3 scaffold_12970:6946205-6946302 + G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATGT----ATGTATATA----T-AA------TAT------A------------------------------CATGTGCAATGCAAA-A--------------TTGGCAATTGCAA--------------------------------------------------GCGC----AAAGCTAT------CA-------------ACATTACCA---------GCATCAGCAATCACTT-------CATCAT------
droMoj3 scaffold_6359:1876353-1876499 + A-CACACAGATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATATAT---------------------------------------------------------AAATATAT----ATGC--ACA----TATA------TAT----ATA------------------------------TAT----TTTAT-------------------TTGTATCTTGAAAT-------TT---GTGTGCC--AACAAAGAGAAC-GACGCCCGCCGGCAACAGCAGCA-----------------------------ACAGCAGCAACA---------GCAGCAAC------AGCAGCAAC----CGCAG
droGri2 scaffold_15245:5841156-5841375 - C-CTGCTTAATTAACT-------T-AACCATCTAATTGCA-ATTG-AAA---C--------------------------------------------------------------------------TTTAAGTGTGTAAA-C--------AA-TAATTTAAGT-CG-------------------------------------------------------------------A-------------TGCAA--AAGTCCTTGAGTCTCTGTA--TATAT--ATA----TGAA------TAT------G------------------------------AAT--GG-TTATCTA-T--------------GTGTAGGTCGTAATG------TACAAAGGTACAACAGCCTCAACAGACAAC-AACAA---CAACAAC----AACACCAT------CA----------------GC---------------AACAACAATACCATCAGCAGCAG----CAGCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACCCTGC---------TCT----------------AAGCA---T---------------ATA-------------TATAT--ATTGTGTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAACA---------GCAGCAGCAATACAAC-------AATCAA------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................TGCATAAAACA--TTTAGCA-TAGCTTAGGT-.......................................................................................................................................................................................................................................................................................................................................................................2815.00500000004010000000
........................................................................................................................................................................................................................................................................................................................................................TGCTGTGTACA-T--------------ATGTAGGTCGTAATG------....................................................................................................................................2713.00300000000030000000
...........................................................................................................................................................................................................................................................................................................................................................TGTGTACA-T--------------ATGTAGGTCGTAATG------TA---...............................................................................................................................2612.00200000000020000000
....................................................................................................................................................................................................................................................................................................................................................TCTGTGCTGTGTACA-T--------------ATGTAGGT.................................................................................................................................................2412.00200000001010000000
......................................................................................................................................................................................................................................................................................................................................................................................TAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAAC................................................2712.00200000000020000000
...............................................................................................................................................................................................................................................................................................................................................................TACA-T--------------ATGTAGGTCGTAATG------TA---AGG............................................................................................................................2512.00200000000020000000
....................................................................................................................................................................................................................................................................................................................................................................T--------------ATGTAGGTCGTAATG------TA---AGGTACC--......................................................................................................................2512.00200000000020000000
............................................................................................................................................................................................................................................................................................TA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------A........................................................................................................................................................2712.00200000000020000000
..........................................................................................................................................................TAGCTTAGGT-TACTCTACACCCTGC---------...............................................................................................................................................................................................................................................................................................................................................2512.00200000000020000000
......................................................................................................................................................................................................................................................................................TAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGT..............................................................................................................................................................................2412.00200000000020000000
.............................................................................................................................................................................................................................................................................................................TT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGT.................................................................................................................................................2712.00200000000020000000
......................................................................................................................................................................................................................................................................................TAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTA...........................................................................................................................................................................2711.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................CA-T--------------ATGTAGGTCGTAATG------TA---AGGTAC.........................................................................................................................2611.00100000000100000000
........................................................................................................................................................................................................................................................................TGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGT...................................................................................................................................................................................2911.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------AC...................................................2611.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------.....................................................2611.00100000000010000000
....................................................................................................................................CTGCATAAAACA--TTTAGCA-TAGCTTAGG.........................................................................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTA.............................................................................................................................................2811.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................TACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------.....................................................3011.00100000001000000000
...................................................................................................................................................TTAGCA-TAGCTTAGGT-TACTCTACA..............................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................AGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAAC................................................2611.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------AC...................................................2811.00100000000010000000
............................................................................................................................................................................................................................................................................................TA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------.........................................................................................................................................................2611.00100000000010000000
.......................................................................................................................TTGGCAAATGTGGCTGCATAAAACA--TT........................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...........................................................................................................................................................................................................................................................................................ATA----CCGA------TTT------C------------------------------TCTGTGCTGT..............................................................................................................................................................................2111.00100100000000000000
.................................TCT-GCTCGTT--ATA---CCCCG---------------------------CC----CAC-GTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................TGTGCTGTGTACA-T--------------ATGTAGGTCGTAA............................................................................................................................................2711.00100000000010000000
.....................................................................................................................................................................TACTCTACACCCTGC---------TCT----------------AAGCA---T---------------A...................................................................................................................................................................................................................................................................................................2511.00100000000010000000
........................................................................................................................TGGCAAATGTGGCTGCATAAAACA--TT........................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................TGTACA-T--------------ATGTAGGTCGTAATG------TA---...............................................................................................................................2411.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAAC................................................2911.00100000000010000000
............TACT-------AAAACCATTTTCT-GCTCGTT--A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................ACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--......................................................................................................................2811.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................TCTGTGCTGTGTACA-T--------------ATGTAGGTCGT..............................................................................................................................................2711.00100000000010000000
.............................................................................................................................................................................................................................................................................................A----CCGA------TTT------C------------------------------TCTGTGCTGTG.............................................................................................................................................................................2011.00100100000000000000
............................................................................................................TGA-AAACTATTTGGCAAATGTGGCA......................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
droSec2
G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CC----CAC-GTCAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACCCTGC---------TCT----------------AAGCA---TATATAT---------ATA-------------TATAT--ATTGTGTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAACA---------GCAGCAGCAATACAAC-------AATCAA------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................ATTTGGCAAATGTGGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................GCTGTGTACA-T--------------ATGTAGGTCGT..............................................................................................................................................2211.0010100
.............................................................................................................................................................................................................................................................................................................TT------C------------------------------TCTGTGCTGTGTACA-........................................................................................................................................................................1811.0010010
......................................................................................................................................................................................................................................................................................................................................................TGTGCTGTGTACA-T--------------ATGTAG...................................................................................................................................................2011.0010010
dm3
G-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCT---------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACACATTGC---------TCT----------------AAGCA---TATATAT--A---TAAATA-------------TGTAT--ATTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAGCAACAACA---GCAGCAGCAATACAAC-------AATCAG------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................GTGTACA-T--------------ATGTAGGTCGT..............................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CTATTTGGCAAATGTGGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A-------------TGTAT--ATTGTCTGCTGCCCG..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATTTACT-------AAAACCATTTTCT-GCTCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................AAATGTGGCTGCATAAAACA--..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................T--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGT............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTTAGCA-TAGCTTAGGT-TACTCTACACAT...........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGTAGGTCGTAATG------TA---AGGTA..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................AGCA-TAGCTTAGGT-TACTCTACACA............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTTCT-GCTCGTT--ATA---CCCCT---------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTTCT-GCTCGTT--ATA---CCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------AC...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AGCTTAGGT-TACTCTACA..............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TTGGCAAATGTGGCTGCATAAAACA--T.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATG------TA---AGGTACC--A----------------------------------------------------------------ACAA.................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TG------TA---AGGTACC--A----------------------------------------------------------------ACAACAGCAAC..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TA---AGGTACC--A----------------------------------------------------------------ACAACAGCAACAAA.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAGCAATACAAC-------A...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TG------TA---AGGTACC--A----------------------------------------------------------------ACAACA...............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GTACA-T--------------ATGTAGGTCGTAAT...........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................GTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAAC................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACA---GCAGCAGC...........................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------ACAACAGCAACAACA---GCAGCAGCAA.........................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACA---GCAGCAGC...........................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACA---GCAGCAG............................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACA---GCAGC..............................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACA---GCAGCAGCAA.........................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACA---GCAGCAGCA..........................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACA---GCAGCAGCAA.........................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACA---GCAGCAGCA..........................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACA---GCAGCA.............................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
droEre2
C-TGGCGAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ACA---CCCCG---------------------------CC----CTC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA---TTAGCA-TAGCTTAGGT-TACTCTAC---CT---------------------------------------ATACTC---------GCA-------------CATAT--TTTGTCTGCTGCCCGTGT----ATAT--ACATATGCCCA------TTT------C------------------------------TCTGTGCCCTGTATG-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------GCAGCAGCA----------------------------------------GCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................TG------TA---AGGTACC--A----------------------------------------------------------------GCAGCA...............................................1811.0010000010
...........................................................................................................................................................................................................................................................AT--TTTGTCTGCTGCCCGTGT----ATAT--ACAT.............................................................................................................................................................................................................................................2811.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................ATG------TA---AGGTACC--A----------------------------------------------------------------GCAGC................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................CA------TTT------C------------------------------TCTGTGCCCTGTATG-T--------------AT.......................................................................................................................................................2411.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................GTACC--A----------------------------------------------------------------GCAGCAGCA----------------------------------------GCA.1870.1411000000
droYak3
C-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTTTTATA---CCCCG-A-------------------------CC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGCTTAGGT-TACTCTACA------------------------------------------TATA-TCGTAC--TATAGAACCTACATACCTATATAT--TTTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAACAGC---------------AGCAGTACAAC-------AATCAG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
C-TGGCGAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------CCCCCACAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACTCTACACTC------AC----TCTACCTATCTATCTATCTAT-----CTATATAT---------ATA-------------TGTAT--ATTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGC------------AACAGCAATACAAC-------AATCAGCAACAGSizeHit CountTotal NormTotal
No Reads
droBia1
C--GGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTC-TAA---CCCCG---------------------------CC----CCT-GTGAGCAAC-TCAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACG--TTTAGCA-TAGCTTAGGT-TACTCTACACCCCGCCATCTACAATCT----------------ATG------GT------ACACTTTAT---------------GTATTTCATGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCCGTGTACA-T--------------ATGTAGGTCGTAATG------TG---AGGTACC--A----------------------------------------------------------------GCAGCAG------------CAGCAGCAGTACAAC-------AATCAG------SizeHit CountTotal NormTotal
No Reads
droTak1
C-TGGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTT-AAA--CCCCCG---------------------------CC----CAT-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACG--TTTAGCA-TAGTTTAAGT-TACTCTACACTCT-----ATACACTCT----------------ATACACCCTATA------CACTATATA-------------TATGT--TTTGTCTGCTGCCCGTGT----ATAT--ATA----CCGA------TTT------C------------------------------TCTGTGCCGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCA------GCAACAGCAATACAAC-------AATCAG---CAASizeHit CountTotal NormTotal
No Reads
droEle1
C-TGGCAAAATTTACT-------AAAACCATTTTCT-GCTCGTT--ATA---CCCCG---------------------------TT----CAC-GTGAGCAACTTAAATGA-AAACTATTTGGCAAATGTGGTTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACACTACACTCT---------------------------------------ATATAT---------ATA-------------TATAT--ATTGTCTGCTGCCTGTGTGT--ATAT--ATA----CCAA------TCT------T------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCA------GCATCAGCAGTACAAC-------AATCAG------SizeHit CountTotal NormTotal
No Reads
droRho1
T-TGGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTT--AAA---CCCCG---------------------------TC----CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--TTTAGCA-TAGTTTAAGT-TACACT-----------------------------------------------------------TTATA-------------TATAT--ATTGTCTGCTGCTCGTGTGT--ATAT--ATA----CC-A------TTT------A------------------------------TCTGTGCTGTGTACA-T--------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCA---------GCAGCAGCAGTACAAC-------AATCAG------SizeHit CountTotal NormTotal
No Reads
droFic1
C-TTGCGAAATTTACT-------A-AACCATTTTCT-GCTCGTTTTACA---CCCCG---------------------------CC----CAT-GTGAGCAAC-TAAATGA-AAACTATTTGGCAAATGTGGCTGCATAAAACA--CTCAGCA-TAGTTTAAGT-TACCCTACACAAC---------------------------------------AG------ACACCTTAGA-------------TATAT--AGTGTCTGCTGCCTCTGTA--TATAT--ATA----CCGATACCAATTCATCTGTG------------------------------TGTGTGCTGTGTACA-TAT------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------ACAGCAGCAGCAGCAGCAATATCAGCAGTACAAC-------AATCAG------SizeHit CountTotal NormTotal
No Reads
droKik1
T-TGGCGAAATTTACT-------A-AACAATTTTCC-GCTCGTT--ATA---CCTCCCATG---CCCCTGCC-CCCTGTGATCGCCCC--CAC-GTGAGCAAC-TAAATGA-AAACTATTTGGCAACTGTGGCTGCATAAAGCA--TTTAGCACTAGACTA--T-TAG---ACA--CT-----AC----CCTACAT---------------TA---T---------------ATA-------------TATAT--ACTATATG--------------------------------------TT------C------------------------------TC-ATGCTGTGT-------------------ATGTAGGTCGTAATG------TA---AGGTACC--A----------------------------------------------------------------GCAGCAGCAGCAACAGCAGCAGCAGCAGTACAGT-------ACTCAG---CAGSizeHit CountTotal NormTotal
No Reads
droAna3
A-TGGCGAAATTTACT-------A-AACAATTCTCT--CTCGCT--C-----CCCCG------------------------------------------ACAC-TAAATGCAAAACTATTTGGCAAATGTGGCTGCAGAAAACA--CTTAGCA-TAGTTTAAGCCTCCTCTG----------------------------------------------------------------------------TATA-------------GACCGTCT----GTAT--ATA--------------TCT------C------------------------------TGTGTGCTGTGTACA-T--------------ATGTAGGCCGTAATG------TG---AGGTACC--CACCACA--------------G---CAACAACACCA-----------------------------CCAGCAGCAACA------GCAGCAGCAGTACAAC-------ACTCAG------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................GTAATG------TG---AGGTACC--CACCACA--------------G---CAA..........................................................................................2611.001000010
droBip1
A-TGGCGAAATTTACT-------A-AACAATTCTCT-A--------------TCTTG---------------------------CT----CCC-CTG--AAAC-TGAATGCAAAACTATTTGGCAAATGTGGCTGCAGAAAACA--CTTAGCA-TAGTTTAAGC-C--TCCAC------------------------------------------------------------------------------------TGTCTATAGACCGTCTGTATGTAT--A--------TA------TCT------T------------------------------TGTGTGCTGTGTACA-T--------------ATGTAGGCCGTAATGTGAATGTG---AGGTACC--AGCCACA--------------G---CAACAGCAACA----C-------------------------CAGCAGCAGCAGCAGCAACAGCAGCAGTACAAC-------ACTCAG------SizeHit CountTotal NormTotal
No Reads
dp5
TTTGGCAAAATTTACTGAGAGCTAAAACAATTCTAT-G---GTT--ATATT-CCTCG-ACGGAACGCCTGAACCCCT--AAACAACTG--CATACTGTGCACG-TAAATGAGAAACTATTTGGCAAATGTGGCTGCAGCAAAGAATTTTGGCA-TAGTTTAAGT-TAC---ACACTCT-----AT----CCTGCATATATACATATAT---------------------------------------------------------AACTATAT----ATAT--ATA----TCTA------TCT----ATA------------------------------TCTATGCTGTATATA-TAT--ATATATACACATGTAGGTCGTAATG------TA---AGATACC--AACAACA--------------A------CAGC----AACACTAT------CAGCAACAACAATAC-CAACAACAACA---------------A------CAGCAGCTG----CAGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TACTGAGAGCTAAAACAATTCTAT-G---GTT--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000003
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-CAACAACAACA---------------A------CAGCAGC............2221.0020010100000
.....................................................................................................................ATTTGGCAAATGTGGCTGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------A------CAGCAGCTG----CAGCA.1940.7530300000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-CAACAACAACA---------------A------CAGCAGC............2160.3320110000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACA---------------A------CAGCAGCT...........1860.1710000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CAACAACAACA---------------A------CAGCAGC............2090.1110100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-CAACAACAACA---------------A------CAGCAG.............19110.0910100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................C--AACAACA--------------A------CAGC----AACACTAC------....................................................................21110.0910100000000
droPer2
TTTGGCAAAATTTACTGAGAGCTAAAACAATTCTAT-G---GTT--ATATT-CCTCG-ACGGAACGCCTGAACCCCT--GAACAACTG--CATACTGTGCACG-TAAATGAGAAACTATTTGGCAAATGTGGCTGCAGCAAAGAATTTTGGCA-TAGTTTAAGT-TAC---ACACTCT-----AT----CCTGCATATATACATATAT---------------------------------------------------------AACTATAT----ATAT--ATA----TCTA------TCT----ATA------------------------------TCTATGCTGTATATA-TATATATATATACACATGTAGGTCGTAATG------TA---ACATACC--AACAACAACAGA-AAC-CCCAA---CAACAGC----AACACTAT------CAGCAACAACAATAC-CAACAACAACA---------------A------CAGCTGCTG----CAGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................GGAACGCCTGAACCCCT--GAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................ATA----TCTA------TCT----ATA------------------------------TCTATGCTGT..............................................................................................................................................................................2311.001010000
droWil2
--------------------------------------------------------------------------------------------------------TAAATGA-GAATCATTTGGCAGCT--TATTGCATA-----------------TCGTGAG-----------------------------------------AAA---------------------------------------------------------TTTCCATATGTATATAT--ATA----TCTA------T--------ACCTACCCAAAATACTACTACTACTATATCCCCCAAACTATGTATGTT--------------GTGTAGGTCGTAATG------TA---AGGTACC--AGCAACA--------------A---CAACAACAACA----CCAACATAATTAC-------------CAACAACAACA---------------ACAATATCAGCAGCAG----CAGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................GTCGTAATG------TA---AGGTACC--AGC...................................................................................................................2112.00220000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------ACAATATCAGCAGCAG----CA....1930.33100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---------------ACAATATCAGC...............1870.14100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------CAACAACAACA---------------ACAATA....................19200.05101000
droVir3
G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATGT----ATGTATATA----T-AA------TAT------A------------------------------CATGTGCAATGCAAA-A--------------TTGGCAATTGCAA--------------------------------------------------GCGC----AAAGCTAT------CA-------------ACATTACCA---------GCATCAGCAATCACTT-------CATCAT------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................TAT------A------------------------------CATGTGCAATGCAAA-A--------------TTGGCAAT.................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................T------A------------------------------CATGTGCAATGCAAA-A--------------TTGGCAAT.................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
A-CACACAGATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATATAT---------------------------------------------------------AAATATAT----ATGC--ACA----TATA------TAT----ATA------------------------------TAT----TTTAT-------------------TTGTATCTTGAAAT-------TT---GTGTGCC--AACAAAGAGAAC-GACGCCCGCCGGCAACAGCAGCA-----------------------------ACAGCAGCAACA---------GCAGCAAC------AGCAGCAAC----CGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------------ACAGCAGCAACA---------GCAGC...........................22200.255000050
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------ACAGCAGCAACA---------GCAGCA..........................19200.051001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------GCAGCAAC------AGCAGCA...........19200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCA-----------------------------ACAGCAG..............................................19200.051100000
droGri2
C-CTGCTTAATTAACT-------T-AACCATCTAATTGCA-ATTG-AAA---C--------------------------------------------------------------------------TTTAAGTGTGTAAA-C--------AA-TAATTTAAGT-CG-------------------------------------------------------------------A-------------TGCAA--AAGTCCTTGAGTCTCTGTA--TATAT--ATA----TGAA------TAT------G------------------------------AAT--GG-TTATCTA-T--------------GTGTAGGTCGTAATG------TACAAAGGTACAACAGCCTCAACAGACAAC-AACAA---CAACAAC----AACACCAT------CA----------------GC---------------AACAACAATACCATCAGCAGCAG----CAGCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---CAACAAC----AACACCAT------C...................................................................2050.20110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................C-AACAA---CAACAAC----AACACCAT------....................................................................21110.09110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCAGCAGCAG----CAGCA.19200.05110

Generated: 05/19/2015 at 05:07 AM