ID:

dsi_13430

Coordinate:

3l:8517512-8517661 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.9 -28.8 -28.8

Flybase annnotation

exon [3l_8516822_8517511_-]; CDS [3l_8516822_8517511_-]; intron [3l_8517512_8521812_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGGTTGAGTGCGCCCAACTGCTGAGTGGTGCGAAAAATGTAAAATTGTGGGTCAGGCATTGGGGCCAAAAATAGAGCCAGCAAAGCGAATCGACGGAGGGTCATTGTGTGGTAAACTGGGGCTACTTCTCGGTAATCAATTCAATTGATAAATGGTGGAAAAATGTGTCAAAGTTCTAATGAATGCATTCGATCCGTAGCAAGCAAACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTCATCGAGG
**************************************************...((..(((((((((.....(((...(((.((......(((((.((((((((...((.......))...)))).))))))))).((((((...))))))...)).))).....)))......)))))))))..))..............**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
M025
embryo
GSM343915
embryo
SRR618934
dsim w501 ovaries
M053
female body
SRR553485
Chicharo_3 day-old ovaries
SRR902008
ovaries
SRR553487
NRT_0-2 hours eggs
......................................................AGGCATTGGGGTCGAAAA.................................................................................................................................................................................. 18 2 4 5.25 21 21 0 0 0 0 0 0 0
......................................................AGGCATTGGGGTCGAAAAGA................................................................................................................................................................................ 20 3 9 4.11 37 37 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAACCTCGATCGAGATCG........................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0
......................................................AGGCATTGGGGTCGAAA................................................................................................................................................................................... 17 2 13 1.54 20 20 0 0 0 0 0 0 0
.........................................................................................................TGTGTGGTAAACAGG.................................................................................................................................. 15 1 18 1.33 24 18 0 0 0 0 6 0 0
.....................................................GAGGCATTGGGGTCGAAAA.................................................................................................................................................................................. 19 3 20 1.15 23 23 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATCGAGATCGAGCAGCTC................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................CGCAAGCAAACCTCGATCGAGATCGAGC........................ 28 1 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................................AAAATGTGTCAAAGTTCTAATG.................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................CGATCGAGATCGAGCAGCTC................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..................CTGCTGAGTGGTGCGAAAA..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................................................................................................................................................................CAAACCTCGATCGAGATCG........................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................CGATCGAGATCGAGCAGCT.................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................AACCTCGATCGAGATCGAGCAGCT.................... 24 0 1 1.00 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................CGATCGAGATCAAGCAGCTC................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................ATTGACGGAGGGTCA.................................................................................................................................................. 15 1 5 0.20 1 0 0 0 1 0 0 0 0
................................................TTGATCAGGCATTGGGACCAAAA................................................................................................................................................................................... 23 3 7 0.14 1 0 0 0 0 0 0 1 0
....................................................TCAGGCATTGCGGAGAAAA................................................................................................................................................................................... 19 3 19 0.11 2 0 0 0 0 0 0 0 2
.....................................................................................................................................................................................................TAGCGAGCAAACCTCA..................................... 16 2 20 0.10 2 0 0 0 2 0 0 0 0

Anti-sense strand reads

CACCAACTCACGCGGGTTGACGACTCACCACGCTTTTTACATTTTAACACCCAGTCCGTAACCCCGGTTTTTATCTCGGTCGTTTCGCTTAGCTGCCTCCCAGTAACACACCATTTGACCCCGATGAAGAGCCATTAGTTAAGTTAACTATTTACCACCTTTTTACACAGTTTCAAGATTACTTACGTAAGCTAGGCATCGTTCGTTTGGAGCTAGCTCTAGCTCGTCGAGTTACGGGCGCAGTAGCTCC
**************************************************...((..(((((((((.....(((...(((.((......(((((.((((((((...((.......))...)))).))))))))).((((((...))))))...)).))).....)))......)))))))))..))..............**************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
SRR553487
NRT_0-2 hours eggs
SRR553486
Makindu_3 day-old ovaries
SRR553488
RT_0-2 hours eggs
...................................................................TTTTTATATCGGTGGTTTC.................................................................................................................................................................... 19 2 7 1.00 7 7 0 0 0
.................................................................................................................................................................................................................................GTCGAGTTACTGGCGGATTAG.... 21 3 1 1.00 1 0 1 0 0
...................................................CCGTCCGGAACCCAGGTTTTT.................................................................................................................................................................................. 21 3 3 0.33 1 0 0 1 0
.......................................................CCGGAACCCAGGTTTTTCTC............................................................................................................................................................................... 20 3 10 0.20 2 0 0 0 2
...........................................................................TCGGTAGTTTCGCTTAG.............................................................................................................................................................. 17 1 7 0.14 1 1 0 0 0
....................................................................................................................................................................................................................CTCGCTCTAGCTTGTCGACT.................. 20 3 8 0.13 1 0 0 0 1
...............................................................................................................................................................................................................TGGAGCTTGCTCTAG............................ 15 1 14 0.07 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:8517462-8517711 - dsi_13430 GTGGTTGAGTG--------CGCCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTAATCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCG------------AT-CCGTAGCAAGCAAACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGG
droSec2 scaffold_0:1005604-1005853 - GTGGTTGAGTG--------CGCCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTAATCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCG------------AT-CCGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGG
dm3 chr3L:8727906-8728152 - GTGGTTGAGTG----------CCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAATGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTA-TCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATATGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCA------------AT-CCGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGG
droEre2 scaffold_4784:5314772-5315018 + GTGGTTGAGTG----------CCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGC--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------TGGTA-TCAATGCAAT----CGATT----G------------------------------ATGGATGGAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AAAGT--ATGCA------------AT-CCGCAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGG
droYak3 3L:3182328-3182578 + GTGGTTGAGTG----------CCCAAGTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGC--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------TGGTA-TCAATTCAATCGATTGATT----G------------------------------ATGGGCGATAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATCCA------------AT-TTGTAGCAAGCAGACCTCCATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGG
droEug1 scf7180000408961:358629-358654 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTTGAAG
droBia1 scf7180000301468:953435-953460 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAG
droTak1 scf7180000415914:532256-532281 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAG
droEle1 scf7180000490579:557250-557275 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAGG
droRho1 scf7180000780103:196916-196941 - CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAAGCTTCCCTTGAGG
droFic1 scf7180000454078:712683-712708 + CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAG
droKik1 scf7180000302474:238889-239149 + CT---------------------CGACTGCTGAGTGGTGCGAAA----------AATGCA-GT------TTGTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--ACCTCAGAGG----GCCA-TCG--CCGT--------------CA-------------CC-GCTT--TTGTAG-G---GGCTACTACTTCCATTT-GGCG--------ATATCTTGAT----------AT------------------------CGATTGTGGGGAATTTCCAA------------------------------TATCTATTC-----------------TATGTTTGCTATAAT-TCCGG-A--CATTTCCA------------TA-CTGCAGCAAGCAGACCTCCATCGAGATCGAGCAGCTCAATGCCCGTGTC-ATCGAGG
droAna3 scaffold_13337:7912520-7912779 + TTG---------------------AGCTGCTGAGTGGTGCGAATTTGGTGGTGCACTACCCAT------TTTTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCCAAGCAAA--ACACCAGAG-GAGGGTCA-TTGC------------------------AAGAGGTAACCT-GCTT--TTTTCG-G---GGCAA--ACTTCCAAAG-GGGA---------------------CAA-TCTATTAAC---TATATA----------------------------------GTGGGA-----------TTATTG-------CTAATCA-TTGGA-----TATTAT---------------------------------------TGGA-CT-CCACAGCAAGCAGACCTCCATTGAGATCGAGCAGCTCAATGCCCGCGTC-ATTGAGG
droBip1 scf7180000396541:68833-69086 + TTG---------------------AGCTGCTGAGTGGTGCGAATTTGGTGGTGCACTACCCAT------TTTTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCCAAGCGAA--ACACCAGAG-GAGGGTCA-TTGC------------------------AAGAGGTAACCT-GCTT--TTTTCG-G---GGCA---ACTTCCAAAG-GGAA---------------------CAA-TCTATGAAC---TATATA----------------------------------GTGGGA-----------CTATTG-------CTAATCA-----------TATTAT---------------------------------------TGGA-TT-CCACAGCAAGCAGACCTCCATTGAGATCGAGCAGCTCAATGCCCGCGTC-ATTGAGG
dp5 XR_group8:8862650-8862912 + GCAGAAGT-----------------AGTGCTGAGTGTTGGGAAA-----------ATGTA-TT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCG--------AGCAAAGCGAA--ACACCGGAGGGAGCGGCA-TTG--AGGT--------------AAAGCACGAGGTAAAGC-GCAT--TT-TGGGG----GGC---ACTTCCA-------------------------T----------AT------------------------CGATTG------ATTTCCAAAAGATTCCAAACTGTGTG--------CAATGTTTCAT-------------------------------------------------TTGTCCTTTTGCGAATTCCTGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTT-GTTGAGG
droPer2 scaffold_50:343387-343649 - GCAGAAGT-----------------AGTGCTGAGTGTTGGGAAA-----------ATGTA-TT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCG--------AGCAAAGCGAA--ACATCGGAGGGAGCGTCA-TTG--AGGT--------------AAAGCACGAGGAAAAGC-GCAT--TT-TGGGG----GGC---ACTTCCA-------------------------T----------AT------------------------CGATTG------ATTTCCAAAAGATTCCAAACTGTGTG--------CAATGTTTCAT-------------------------------------------------TTGTCCTTTTGCGAATTCCTGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTT-GTTGAGG
droWil2 scf2_1100000004511:8130255-8130537 + dwi_652 CAAGTTG------------------AGTGCTGAGTGATGCGAAA-----------ATGTAAAATTTTATTTGTGGGTCAGTACATTGGGGCCAAAAATACATTTTGGCGTTTGGCT--------AGTA-AGCGAAAATCAAAAA---------------------------------------------TAAAATT-ATATATTT-TGGGCTTATGTT---ACTTCCAAAG-ATTGTTTGTTTGACT----------------GAT----TGATT----G----------------------ATT-------GATTGAA-----------G-GTTT-------TTAGGTATT-TGTGTATGT-----------GTAATAATGTTTGGAATGC--ATTTAT-----------CT-CAATAGCAAGCAGACATCGATCGAGATCGAGCAGCTCAATGCCCGTGTC-ATTGAGG
droVir3 scaffold_13049:6389404-6389671 - dvi_18647 GCAACAGAATC--------GAGCTGAATGCTGAGTGTTAAGAAA-----------ATGA-TTT------TTGTGGGTCAG-ACATTGG-GCCGAAAATAGC------------GCA--GAA----TGCAAGCGAA--T-----GAAA----GCGA-CTTCGAGGT--------------GAGCTG---AC------AACAT--T--TGA-G---GGCA---ACTTCCAGCC-GAGC---------------------CA-CTAAATGAAC---TATATA------ATACT-------------------------------CTGTTCGAACTGTTT-------CTGACCAAT-TGGGTATATATTCT---------------------------------------GTGATTTCCTTTAGCAAGCAGACGAGCATTGAGATCGAACAGCTGAATGCGCGCGTC-ATTGAGG
droMoj3 scaffold_6680:4710036-4710311 - dmo_2350 ACG-C------------------TGAATGCTGAGTGTTGAGAAA----------AATTCAATT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCGCAGACTGAAG-CAAGCGAA--T-----GAAA--GCGACG-TCG--AGGTGACGGCTTTAAGTTAAACTT---AA----GCGACTT--TTCTGG-G---GGCA---ACTTCCAAACAGAGA--------------------CCAACTAAATGAATGAATT----GATATGTAACTCTATT------------------GTG--------------------CAA-------T------TGC-----TGTTCT-------------------------------------ATATGACTT-CCTTAGCAAGCAGACCAGCATTGAGATCGAGCAGCTGAATGCTCGCGTC-GTTGAGG
droGri2 scaffold_15110:6352960-6353242 + GAATCAGAATCACAATCACAAACTGAATGCTGAGTGTTGAGAAA----------ATTGTATTT------TTGTGGGTCAG-ACATTGGGGCCAAAAATAGC------------GCA--GAATGCAG-AAAGCGAA--T-----GAAA--GCGATTTTCG--AGGT--------------GA--------CAAAAGC-CCAGATT--TGA-G---GGCA---ACTTCCAGCA-GAGACTTACATCACT-----GA----A-CTATATGAAC---TATATA----------------------------------TATA-----TATATA--------TAATGATCAAT------TGG-----TATTCT---------------------------------------TGGATAT-CCTTAGCAAGCAGACCAGCATTGAGATCGAGCAGCTTAATGCCCGTGTC-GTTGAGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTGGTTGAGTG--------CGCCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTAATCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCG------------AT-CCGTAGCAAGCAAACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGGSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTCGATCGAGATCG............................1812.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGATCGAGCAGCTC....................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................AAAATGTGT---------CAAAGTTCTAATG--------------------------------------....................................................................................2211.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCTC....................2011.00100100000000000000
..........................CTGCTGAGTGGTGCGAAA----------A................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACCTCGATCGAGATCG............................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCT.....................1911.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTCGATCGAGATCGAGCAGCT.....................2411.00100010000000000000
droSec2
GTGGTTGAGTG--------CGCCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTAATCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCG------------AT-CCGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGGSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATCGAGCAGCTCAATGCC..............2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCGA.................................1911.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGC.........................2411.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCAGC......................2711.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCAATGCCCGCGTC-.......1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCGAGCA........................2411.0010010
dm3
GTGGTTGAGTG----------CCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAATGCGAA--TCGACGGAGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------CGGTA-TCAATTCAAT----TGATA----A------------------------------ATGGTGGAAAAATATGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATTCA------------AT-CCGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCA........................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000331000000000100000000000000001000000000000
.....TGAGTG----------CCCAACTGCTGAGTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCG............................2012.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCTCAATGCCCGCGTC-A......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTCGATCGAGATCGAGCAGCT.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAT----TGATA----A------------------------------ATGGTGGAAAAAT....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TAATG--------------------------------------AATGC--ATTCA------------AT-CCGTA....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCGA.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGCAGACCTCGATCGA.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AGG----GTCA-TTGTGTGGT--------------AAACTG---GG-------------------------................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAGTTCTAATG--------------------------------------AATGC--ATTCA------------AT-CCGTA....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGAT..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCTCAATGCCCGCGTC-A......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCTCAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCGAGATCGAGCA........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCGATCGAGATCGAGCAGC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCGATCGAGATCGAGCAGCT.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGATCGAGATCGAGCAGCTCAATGCC..............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................ATGCGAA--TCGACGGAGG----GTCA-...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GTGGGTCAG-GCATTGGGG.............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCG..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................GCAATGCGAA--TCGACGGAG.....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAGATCGAGCAGCT.....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ACGGAGG----GTCA-TTGTGT.....................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCTCAAA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGCAGCTCAATGCCCGCGTC-.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCGATCGAGATCGAGCAGCTCA...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCGAGCA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAGCTCAATGCCCGCGTC-ATC....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AATGCGAA--TCGACGGAGG----................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTCGATCGAGATCGAGA.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCAATGCCCGCGTC-A......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCAGCT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCGATCGAGATCGAGC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCAG.......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAATGCCCGCGTC-ATCGA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTCGATCGAGATCGAGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GGTA-TCAATTCAAT----TGATA----A------------------------------ATGG.............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTCGATCGAGATCGAGCAGC......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCTCGATCGAGATCG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCGAGCAG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................................................................GCGAA--TCGACGGAGG----GTCA-T..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGCCCGCGTC-ATCGAGG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCGATCGAGATCGAGCAGC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAT----TGATA----A------------------------------ATGGTGGAAAAATATG.................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAGCTCAATGCCC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGC.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGA...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GTGGTTGAGTG----------CCCAACTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGC--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------TGGTA-TCAATGCAAT----CGATT----G------------------------------ATGGATGGAAAATGTGT---------CAAAGTTCTAATG--------------------------------------AAAGT--ATGCA------------AT-CCGCAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGGSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCGA.................................1913.0030000210
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATCGAGCAGCTCAATGC...............2111.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAATGCCCGCGTC-ATC....2011.0010100000
........................................................................................................................................................................................................................................................................................................................GGATGGAAAATGTGT---------CAAAGTTCT..............................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACCTCGATCGAGATCGAGC.........................2511.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTCGATCGAGATCGAGCAGCT.....................2611.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATC.............................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAG..........................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACCTCGATCGAG................................2011.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACCTCGATCGAGATCGAGCAGC......................2511.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGCAGCTCAATGCCCGCGTC-.......2411.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCG............................2111.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCA........................2511.0010000010
droYak3
GTGGTTGAGTG----------CCCAAGTGCTGAGTGGTGCGAAA----------AATGTAAAA------TTGTGGGTCAG-GCATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--TCGACGGAGG----GTCA-TTGTGTGGC--------------AAACTG---GG-------------------------GCT---ACTTCT-----------------------TGGTA-TCAATTCAATCGATTGATT----G------------------------------ATGGGCGATAAATGTGT---------CAAAGTTCTAATG--------------------------------------AATGC--ATCCA------------AT-TTGTAGCAAGCAGACCTCCATCGAGATCGAGCAGCTCAATGCCCGCGTC-ATCGAGGSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCCATCGAGAT..............................1811.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGACCTCCATCGAGATCGAGC.........................2611.00100000010000
droEug1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTTGAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAGSizeHit CountTotal NormTotal
No Reads
droTak1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAGSizeHit CountTotal NormTotal
No Reads
droEle1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAGGSizeHit CountTotal NormTotal
No Reads
droRho1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAAGCTTCCCTTGAGGSizeHit CountTotal NormTotal
No Reads
droFic1
CG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATGCAGGCTTCCCTCGAAGSizeHit CountTotal NormTotal
No Reads
droKik1
CT---------------------CGACTGCTGAGTGGTGCGAAA----------AATGCA-GT------TTGTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCAAAGCGAA--ACCTCAGAGG----GCCA-TCG--CCGT--------------CA-------------CC-GCTT--TTGTAG-G---GGCTACTACTTCCATTT-GGCG--------ATATCTTGAT----------AT------------------------CGATTGTGGGGAATTTCCAA------------------------------TATCTATTC-----------------TATGTTTGCTATAAT-TCCGG-A--CATTTCCA------------TA-CTGCAGCAAGCAGACCTCCATCGAGATCGAGCAGCTCAATGCCCGTGTC-ATCGAGGSizeHit CountTotal NormTotal
No Reads
droAna3
TTG---------------------AGCTGCTGAGTGGTGCGAATTTGGTGGTGCACTACCCAT------TTTTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCCAAGCAAA--ACACCAGAG-GAGGGTCA-TTGC------------------------AAGAGGTAACCT-GCTT--TTTTCG-G---GGCAA--ACTTCCAAAG-GGGA---------------------CAA-TCTATTAAC---TATATA----------------------------------GTGGGA-----------TTATTG-------CTAATCA-TTGGA-----TATTAT---------------------------------------TGGA-CT-CCACAGCAAGCAGACCTCCATTGAGATCGAGCAGCTCAATGCCCGCGTC-ATTGAGGSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCATTGAGATCGAGCAGCTCA...................2513.003000003
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAGCAGCTCAATGCCCGC...........2211.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACCTCCATTGAGATCGAGC.........................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCATTGAGATCGAGCAGCTC....................2411.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCCATTGAGATCGAGC.........................2411.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGAGATCGAGCAGCT.....................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCCATTGAGATCG............................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTCCATTGAGATCGAGCAGCTCA...................2611.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATTGAGATCGAGCAGCT.....................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCATTGAGATCGAGC.........................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCATTGAGATCGAGCAG.......................2111.001100000
droBip1
TTG---------------------AGCTGCTGAGTGGTGCGAATTTGGTGGTGCACTACCCAT------TTTTGGGTCAG-ACATTGGGGCCAAAAATAGA------------GCC--------AGCCAAGCGAA--ACACCAGAG-GAGGGTCA-TTGC------------------------AAGAGGTAACCT-GCTT--TTTTCG-G---GGCA---ACTTCCAAAG-GGAA---------------------CAA-TCTATGAAC---TATATA----------------------------------GTGGGA-----------CTATTG-------CTAATCA-----------TATTAT---------------------------------------TGGA-TT-CCACAGCAAGCAGACCTCCATTGAGATCGAGCAGCTCAATGCCCGCGTC-ATTGAGGSizeHit CountTotal NormTotal
No Reads
dp5
GCAGAAGT-----------------AGTGCTGAGTGTTGGGAAA-----------ATGTA-TT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCG--------AGCAAAGCGAA--ACACCGGAGGGAGCGGCA-TTG--AGGT--------------AAAGCACGAGGTAAAGC-GCAT--TT-TGGGG----GGC---ACTTCCA-------------------------T----------AT------------------------CGATTG------ATTTCCAAAAGATTCCAAACTGTGTG--------CAATGTTTCAT-------------------------------------------------TTGTCCTTTTGCGAATTCCTGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTT-GTTGAGGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCTCA...................2112.0020100010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGCT.....................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCAGC......................2711.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGA...........................2211.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCGAGCAGCTCAATGCC..............2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCA........................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCGAGCAG.......................2511.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGCAGCTC....................2911.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGATCGAGATCGAGCAGCTCA...................2311.0010000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGATCGAGCAGCTC....................1811.0010100000000
......GT-----------------AGTGCTGAGTGTTGGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAATGCCCGCGTT-GTTGAG.2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCGAGATCGAGCAGCT.....................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCTCAATGCCCGCGTT-GT.....2311.0010000010000
droPer2
GCAGAAGT-----------------AGTGCTGAGTGTTGGGAAA-----------ATGTA-TT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCG--------AGCAAAGCGAA--ACATCGGAGGGAGCGTCA-TTG--AGGT--------------AAAGCACGAGGAAAAGC-GCAT--TT-TGGGG----GGC---ACTTCCA-------------------------T----------AT------------------------CGATTG------ATTTCCAAAAGATTCCAAACTGTGTG--------CAATGTTTCAT-------------------------------------------------TTGTCCTTTTGCGAATTCCTGTAGCAAGCAGACCTCGATCGAGATCGAGCAGCTCAATGCCCGCGTT-GTTGAGGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACCTCGATCGAGATCGAGC.........................2412.002000011
....AAGT-----------------AGTGCTGAGTGTTGGGAAA-----------A...............................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000002
.....AGT-----------------AGTGCTGAGTGTTGGGAAA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
...GAAGT-----------------AGTGCTGAGTGTTGGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGAGATCGAGCAGC......................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCGAGATCGAGCAGCTCA...................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACCTCGATCGAGATCGAGC.........................2311.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGATCGAGCAGCTC....................1811.001100000
.............................CTGAGTGTTGGGAAA-----------ATG.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
......GT-----------------AGTGCTGAGTGTTGGGAAA-----------................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..AGAAGT-----------------AGTGCTGAGTGTTGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droWil2
CAAGTTG------------------AGTGCTGAGTGATGCGAAA-----------ATGTAAAATTTTATTTGTGGGTCAGTACATTGGGGCCAAAAATACATTTTGGCGTTTGGCT--------AGTA-AGCGAAAATCAAAAA---------------------------------------------TAAAATT-ATATATTT-TGGGCTTATGTT---ACTTCCAAAG-ATTGTTTGTTTGACT----------------GAT----TGATT----G----------------------ATT-------GATTGAA-----------G-GTTT-------TTAGGTATT-TGTGTATGT-----------GTAATAATGTTTGGAATGC--ATTTAT-----------CT-CAATAGCAAGCAGACATCGATCGAGATCGAGCAGCTCAATGCCCGTGTC-ATTGAGGSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCGTGTC-ATTGAGG1812.00200020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCGAGATCGAGCAGCTC....................2212.00200020
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACATCGATCGAGATC.............................2012.00201010
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACATCGATCGAGATCGAGC.........................2412.00220000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGATCGAGATCGAGCAGCTC....................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGATCGAGCAGCTC....................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAGATCGAGCAGCTCA...................2011.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACATCGATCGAGATCG............................2411.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAGATCGAGCAGCT.....................1811.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCGAGCAGCTCAAT.................1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACATCGATCGAGATCGAGCAGCT.....................2711.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACATCGATCGAGAT..............................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................TTTGGAATGC--ATTTAT-----------CT-CAATAG...................................................2411.00100001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACATCGATCGAGATCGAGC.........................2511.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACATCGATCGAGAT..............................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................GTTTGGAATGC--ATTTAT-----------CT-CAATAG...................................................2511.00100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACATCGATCGAGATCGAG..........................2311.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGACATCGATCGAGATCGA...........................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACATCGATCGAGATCGA...........................1911.00100010
droVir3
GCAACAGAATC--------GAGCTGAATGCTGAGTGTTAAGAAA-----------ATGA-TTT------TTGTGGGTCAG-ACATTGG-GCCGAAAATAGC------------GCA--GAA----TGCAAGCGAA--T-----GAAA----GCGA-CTTCGAGGT--------------GAGCTG---AC------AACAT--T--TGA-G---GGCA---ACTTCCAGCC-GAGC---------------------CA-CTAAATGAAC---TATATA------ATACT-------------------------------CTGTTCGAACTGTTT-------CTGACCAAT-TGGGTATATATTCT---------------------------------------GTGATTTCCTTTAGCAAGCAGACGAGCATTGAGATCGAACAGCTGAATGCGCGCGTC-ATTGAGGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACAGCTGAATGCGCGC...........1912.002000000000000000110000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCTGAATGCGCGC...........1811.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGAACAGCTGAATGCGCGC...........2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCATTGAGATCGAACAGC......................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGAGCATTGAGATCGAACAGCTG....................2611.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCGAACAGCTGAATGCGC.............2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCATTGAGATCGAACAGCT.....................2411.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGCAGACGAGCATTGAGA...............................2111.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGACGAGCATTGAG................................1811.001000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGAGATCGAACAGCTGAAT.................2311.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGACGAGCATTGAGATCGAACA........................2311.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACGAGCATTGAGATC.............................2011.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCAGACGAGCATTGAGATCGAA..........................2511.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGAGCATTGAGATCGAAC.........................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGACGAGCATTGAGATCGAACAGCT.....................2811.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATTGAGATCGAACAGCTGAATG................2611.001000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATTGAGATCGAACAGCTGAA..................2411.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGAGATCGAACAGCTGAATGC...............2611.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCTGAATGCGCGCGTC-ATTTT..2611.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAATGCGCGCGTC-ATT....1911.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAGATCGAACAGCTGAATG................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCATTGAGATCGAAC.........................2011.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGATCGAACAGCTGAATGCG..............2311.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCTGAATGCGCGCGTC-ATT....2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCTGAATGCGCGCGT.........2011.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................AA----GCGA-CTTCGAGGT--------------GAGC................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATCGAACAGCTG....................1811.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGCTGAATGCGC.............1911.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGAGATCGAACAGCTGAAT.................2411.001000000000000000000010000000000000000000000000000000000000000000
droMoj3
ACG-C------------------TGAATGCTGAGTGTTGAGAAA----------AATTCAATT------TTGTGGGTCAGAGCATTGGGGCCAAAAATAAA------------GCGCAGACTGAAG-CAAGCGAA--T-----GAAA--GCGACG-TCG--AGGTGACGGCTTTAAGTTAAACTT---AA----GCGACTT--TTCTGG-G---GGCA---ACTTCCAAACAGAGA--------------------CCAACTAAATGAATGAATT----GATATGTAACTCTATT------------------GTG--------------------CAA-------T------TGC-----TGTTCT-------------------------------------ATATGACTT-CCTTAGCAAGCAGACCAGCATTGAGATCGAGCAGCTGAATGCTCGCGTC-GTTGAGGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGAGATCGAGCAGCTGAATGCT..............2711.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGAGATCGAGCAGCTGAATG................2411.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATCGAGCAGCTGA...................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATTGAGATCGAGCAGCTGAATG................2511.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGCAGACCAGCATTGAGATC.............................2411.001000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGAGATCGAGCAGCTGA...................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGATCGAGCAGCTGAATGCT..............2411.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTGAATGCTCGCGTC-GTT....2211.001100000
droGri2
GAATCAGAATCACAATCACAAACTGAATGCTGAGTGTTGAGAAA----------ATTGTATTT------TTGTGGGTCAG-ACATTGGGGCCAAAAATAGC------------GCA--GAATGCAG-AAAGCGAA--T-----GAAA--GCGATTTTCG--AGGT--------------GA--------CAAAAGC-CCAGATT--TGA-G---GGCA---ACTTCCAGCA-GAGACTTACATCACT-----GA----A-CTATATGAAC---TATATA----------------------------------TATA-----TATATA--------TAATGATCAAT------TGG-----TATTCT---------------------------------------TGGATAT-CCTTAGCAAGCAGACCAGCATTGAGATCGAGCAGCTTAATGCCCGTGTC-GTTGAGGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads

Generated: 05/18/2015 at 08:51 AM