dsi_1341

intron [2r_9516052_9518205_-]; CDS [2r_9514613_9516051_-]; exon [2r_9514288_9516051_-]

---####################################################################################################################################################################################################################################################### CAGCCTACAAATGGGTGCAATCCTCGGCCTATTCCTCCCTTCCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGCTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT ************************************************..((((.(((((((............(((((((((.......((((((..((((..((......))....)))).))))))...))))))))).........(((.((......)).)))............)))))))....))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M053 female body	M024 male body	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR902009 testis	SRR553485 Chicharo_3 day-old ovaries	M025 embryo	SRR553486 Makindu_3 day-old ovaries
.............................................................................................................................................................................................................................CTGGTGTGGATCAAGTGCTACGAC.....	24	0	1	2.00	2	0	2	0	0	0	0	0	0	0
.............................................................................................TGGGCAGGGCGAAGCCAGAGG........................................................................................................................................	21	3	5	1.40	7	0	0	6	1	0	0	0	0	0
...........................................................................................................................TGGTCTGCAAGGTGGTGC.............................................................................................................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0
...................................................................................................................CGATATGCTGGTCTGCAAGGTGGT...............................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................TCATGTCGGAGCGAGGAGTGG......................................................................	21	3	1	1.00	1	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................AATCTCGTGTGGAACAA...............	17	2	20	0.55	11	0	0	4	5	0	0	0	0	2
...........................................................................................................CACGAGGTCGATATGCCG.............................................................................................................................	18	2	2	0.50	1	0	0	0	1	0	0	0	0	0
.........................................................................................................................GCTGGTCTCCAAGGTGGT...............................................................................................................	18	1	2	0.50	1	0	0	0	0	1	0	0	0	0
............................................................................................................ACGAGGTCGATATGC...............................................................................................................................	15	1	2	0.50	1	0	0	0	1	0	0	0	0	0
................................................................................................GTAGGACGGAGCACGAGG........................................................................................................................................	18	2	4	0.25	1	0	0	0	0	0	0	0	1	0
.........................................................................................................................GCTGGTCTCCAAGGTGGTC..............................................................................................................	19	2	4	0.25	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................ATGCTGGTCTCCAAGG...................................................................................................................	16	1	4	0.25	1	0	0	0	0	0	0	1	0	0
.......................................................................................................................AGGCTGGTCTCCAAGGTG.................................................................................................................	18	2	5	0.20	1	1	0	0	0	0	0	0	0	0
.....................................................................................................................TTAGGCTGGTCTCCAAGGTG.................................................................................................................	20	3	6	0.17	1	0	0	0	0	1	0	0	0	0
................................................................................................GTAGGGCGGAACACGAG.........................................................................................................................................	17	2	7	0.14	1	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................ATATTCAAGGGGCTGTGCGG....................................	20	3	7	0.14	1	0	0	0	0	0	1	0	0	0
..............GTGCAAAGCTCGGCCTA...........................................................................................................................................................................................................................	17	2	7	0.14	1	0	0	0	0	1	0	0	0	0
..............................................................................................................................TCTCCAAGGTGGTCCCGGGC........................................................................................................	20	3	8	0.13	1	0	0	0	0	1	0	0	0	0
....................................................................................................................GCTAAGCTGGTCTCCAAGGT..................................................................................................................	20	3	8	0.13	1	0	0	0	0	0	0	1	0	0
..................................................................................................AGGGCGGAACACGAG.........................................................................................................................................	15	1	9	0.11	1	0	0	1	0	0	0	0	0	0
........................................................................................................................TGCTGGTCTCCAAGG...................................................................................................................	15	1	20	0.10	2	0	0	0	0	0	0	2	0	0
.......................................................................................................................AGGCTGGTCTCCAAGGT..................................................................................................................	17	2	12	0.08	1	0	0	0	0	1	0	0	0	0
....................................................................................................................GAACTGCTGGTCTCCAAGGT..................................................................................................................	20	3	12	0.08	1	0	0	0	0	1	0	0	0	0
........................................................................................................GAGTACGAGGTCGATA..................................................................................................................................	16	2	20	0.05	1	0	0	0	1	0	0	0	0	0
.....................................................................................................................AGTTGCTGGTCTCCAAGGT..................................................................................................................	19	3	20	0.05	1	0	0	0	0	1	0	0	0	0
............GGCTGCAATCGTCGGCC.............................................................................................................................................................................................................................	17	2	20	0.05	1	0	0	0	1	0	0	0	0	0
...........................................................................................................CACTAGGTCGATATGC...............................................................................................................................	16	2	20	0.05	1	0	0	0	1	0	0	0	0	0
.......................................................................................................................GTGCTGGTCTCCAAGGTG.................................................................................................................	18	2	20	0.05	1	0	0	0	0	1	0	0	0	0
......................CTCGGCCTATCCCTCG....................................................................................................................................................................................................................	16	2	20	0.05	1	0	0	0	0	1	0	0	0	0

GTCGGATGTTTACCCACGTTAGGAGCCGGATAAGGAGGGAAGGGCTCCTCCGCCACCACCCGCCGTTGCTACTCCTGCCGCGGTACTATATGCACCCGTCCCGCCTCGTGCTCCCGCTATACGACCAGACGTTCCACCACGGCTCGTTCGTTGACCCTAAGTAAAGCGTCGCTCCTCTCCGTGACGGGTTCCTGTAGAAGCTCCACGACACGCCGGTCTTAGACCACACCTAGTTCACGATGCTGGTACA ************************************************..((((.(((((((............(((((((((.......((((((..((((..((......))....)))).))))))...))))))))).........(((.((......)).)))............)))))))....))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
.........................................TGGCTCCTCCGCCACTA................................................................................................................................................................................................	17	2	20	0.05	1	1	0
......................................................ACCACCCGCCGTTTC.....................................................................................................................................................................................	15	1	20	0.05	1	1	0
..................TCAGGAGCCGGATAATCA......................................................................................................................................................................................................................	18	3	20	0.05	1	0	1

Species	Coordinate	ID	Alignment
droSim2	2r:9515805-9516054 -	dsi_1341	CAGCCTACAAATGGGTGCAATCCTCGGCCTATTCCTCCCTTCCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGCTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT
droSec2	scaffold_1:6353102-6353351 -		CAGCCTACAAATGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGGGGAGAGGCACTGCCAAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT
dm3	chr2R:8837345-8837594 -		CAGCCTACAAGTGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT
droEre2	scaffold_4845:16985289-16985538 +		CAGCCTACAAGTGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGCTGGTCTGCAAGGTGGTGCCCAGCAAGCAATTGGGATTCATTTCGCAGCGGGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATGAAGTGCTACGACCATGT
droYak3	2R:8131572-8131821 +		CAGCCTACAAGTGGGTTCAGTCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTACGTGGGCAGGGCGGAGCACGAGGGCGACATGTTGGTCTGCAAGGTGGTGCCCAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCCGTGCCCAAGGACATCTTCGAGGTGCTTTGCGGCCAGAACCTGGTGTGGATCAAGTGCTACGACCATGT
droEug1	scf7180000409672:3795452-3795701 +		CAGCCTACAAATGGGTACAATCCTCGGCCTATTCCTCTCTACCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCCAGCAAGCAATTGGGATTCATTTCCCAGCGTGGAGAAGCCCTACCCAAGGATATCTTCGAAGTGCTGTGCGGTCAGAATCTGGTGTGGATTAAGTGCTATGATCATGT
droBia1	scf7180000302292:1893249-1893498 -		CAGCCTACAAGTGGGTGCAATCTTCGGCCTACTCCTCCCTACCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATCTACGTGGGCAGGGCGGAGCACGAGGGCGACATGTTGGTCTGCAAGGTGGTGCCTAGCAAGCAGCTGGGATTCATTTCGCAGCGGGGCGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAACCTGGTGTGGATCAAGTGCTACGATCATGT
droTak1	scf7180000415762:291263-291512 +		CAGCCTACAAGTGGGTGCAATCTTCGGCCTACTCCTCCCTTCCCGAGGAGGCGGTGGTGGGCGGGAACGATGAGGACGGCGCCATGATTTACGTGGGCAGGGCGGAGCACGAGGGCGACATGCTGGTCTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCATTTCGCAGCGTGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT
droEle1	scf7180000491215:203160-203409 +		CAGCCTACAAGTGGGTACAATCCTCGGCCTACTCGTCTCTTCCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGACGGCGACATGCTGGTGTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCGTTTCGCAGCGTGGAGAAGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT
droRho1	scf7180000779957:56491-56740 +		CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGAAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGAGGGCGACATGCTGGTGTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCATTTCGCAGCGAGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT
droFic1	scf7180000454066:434663-434912 +		CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCATCGATTCCGGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTACGTGGGACGGGCGGAACACGACGGCGACATGCTGGTGTGCAAGGTGGTTCCCAGCAAGCAACTCGGATTCATTTCCCAGCGAGGAGAAGCGCTGCCCAAGGACATCTTCGAGGTGCTGTGTGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT
droKik1	scf7180000302639:504810-505059 +		CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCCTCCATTCCCGAGGAAGCTGTGGTCGGGGGTAACGATGAAGATGGCGCCATGATCTACGTGGGCAGAGCAGAGCACGAGGGCGATATGCTAGTGTGCAAGGTAGTGCCCTCGAAGCAGCTTGGCTTCATTTCGCAGCGCGGCGAGGCCCTGCCCAAGGACATTTTTGAGGTGCTTTGTGGCCAAAATCTGGTGTGGATCAAGTGCTACGACCATGT
droAna3	scaffold_13266:6307970-6308219 -		CAGCCTACAAATGGGTGCAATCCTCGGCCTACAGCTCCATACCCCCGGAGGCAGTGGTGGGCGGGAATGACGAGGATGGAGCCATGATCTACGTGGGCAGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGGTGCCCACCAAGCAGCTCGGATTCATATCCCAGCGCGGCGAGGCTCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGACATGGATCAAGTGCTACGACCATGT
droBip1	scf7180000395839:462981-463230 -		CAGCCTACAAATGGGTGCAATCCTCGGCCTACAGTTCCATTCCCCCGGAGGCAGTTGTGGGCGGGAATGATGAGGACGGCGCCATGATCTACGTGGGAAGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGGTGCCCACCAAACAGCTCGGATTCATCTCCCAGCGCGGCGAGGCTCTGCCCAAGGACATCTTTGAGGTCCTGTGTGGTCAGAATCTGGCCTGGATCAAGTGCTACGACCATGT
dp5	3:5605675-5605924 -		CAGCCTACAAATGGGTACAGTCCTCGGCCTACTCTTCCATCCCTGAGGACGCTGTGGTTGGCGGCAACGACGAGGACGGCGCAATGATCTACGTGGGCCGGGCCGAGCACGAAGGCGACATGATGGTCTGCAAGGTGGTGCCCTCCAAGCAGATCGGATTCGTCTCCAATCGCGGCGAGGCGCTGCCCAAGGACATCTTCGAGATGCTGTGTGGTCAGAACCTGGTGTGGGTTAAATGCTACGACCACGT
droPer2	scaffold_2:5800297-5800546 -		CAGCCTACAAATGGGTACAGTCCTCGGCCTACTCTTCCATCCCTGAGGACGCTGTGGTGGGCGGCAACGACGAGGACGGTGCAATGATCTACGTGGGCCGGGCCGAGCACGAAGGCGACATGATGGTCTGCAAAGTGGTGCCCTCCAAGCAGATCGGATTCGTCTCCAATCGCGGCGAGGCGCTGCCCAAGGACATCTTCGAGATGCTGTGTGGTCAGAACCTGGTGTGGGTTAAATGTTACGACCACGT
droWil2	scf2_1100000004510:1054567-1054816 +		CAGCTTACAAATGGGTGCAATCTTCGGCGTATTCCTCGATACCAGCTAATGCCGTGGTGGGTGGCAACGATGAAGATGGCGCCATGATCTATGTGGGCCGTGCAGAGCATGAGGGTGATATGCTAGTCTGCAAAGTAGTTCCATCAAAGCAACTGGGCTTTGTCTCACAGCGTGGCGAAGCTCTGCCCAAGGATATATTCGAGGTGCTCTGTGGTCTGAATTTGACATGGAGAAAGTGCTACGATCACAA
droVir3	scaffold_12875:577655-577904 -		CAGCCTACAAATGGGTGCAGTCGTCGGCGTACTCCTCGATACCGCCGAACGCCGTTGTGGGCGGCAATGATGAGGATGGCGCCATGATCTATGTGGGCCGGGCGGAGCATGAGGGCGATATGCTCGTCTGCAAGGTGGTGCCCACCAAGCAGATCGGCTTTGTATCGCAGCGCGGCGAGGCACTGCCCAAGGACATATTCGAGATACTGTGCGGCGAGAATCTAGTCTGGGTCAAGTGCTACGATCACGT
droMoj3	scaffold_6496:3581863-3582112 -		CAGTCTACAAATGGGTTCAATCGTCGGCGTATTCGTCGATACCGCCAAACGCCATTGTGGGTGGCAACGATGAGGACGGCGCCATGATCTATGTGGGCCGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGATGCCATCGAAGCAAATCGGCTATATTTCGCAACGGGGCGAGGCTCTGCCCAAGGACATATTCGAAATACTGTGCGGCGAGAATCTGGTGTGGGTCAAGTGCTACGACCACGT
droGri2	scaffold_15245:10388177-10388426 +		CAGCTTACAAATGGGTGCAGTCCTCGGCGTATGCATCGCTGCCACAACATGCCGTTGTCGGTGGCAATGATGAGGATGGCGCCATGATATATGTGGGTCGGGCGGAGCACGATGGCAACATGCTCGTCTGCAAGGTGGTGCCCAGCAAGCAGATCGGCTACATTTCGCTGCGCGGCGAAGCGCTGCCCAAGGACAAGTTCGAGATGTTGTGCGGCGAGAATCTGGCATGGAGCAAGTGCTACGATCATGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

CAGCCTACAAATGGGTGCAATCCTCGGCCTATTCCTCCCTTCCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGCTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.............................................................................................................................................................................................................................CTGGTGTGGATCAAGTGCTACGAC.....	24	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TGGTCTGCAAGGTGGTGC.............................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................CGATATGCTGGTCTGCAAGGTGGT...............................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CAGCCTACAAATGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGGGGAGAGGCACTGCCAAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
............................................................................................................................................................GATTCATTTCGCAGCGGGGAGAGGC.....................................................................	25	1	2.00	2	1	0	1	0
...........................................................................................................................................GCCGAGCAAGCAACTGGG.............................................................................................	18	1	1.00	1	0	0	1	0
..............................................................................................................................................................................GAGAGGCACTGCCAAAGGA.........................................................	19	1	1.00	1	1	0	0	0
..............................................................GGCAACGATGAGGACGGCGCC.......................................................................................................................................................................	21	1	1.00	1	0	0	1	0
............................................................................................................ACGAGGGCGATATGTTGGTCTGC.......................................................................................................................	23	1	1.00	1	0	1	0	0
....................................................................................................................................................................................CACTGCCAAAGGACATCTTCGAGG..............................................	24	1	1.00	1	1	0	0	0
.......................................................................................................................ATGTTGGTCTGCAAGGTGGT...............................................................................................................	20	1	1.00	1	0	1	0	0
..........................................CCGAGGAGGCAGTGGTGGGCG...........................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
............................................................................................GTGGGCAGGGCGGAGCACGAGGGCG.....................................................................................................................................	25	1	1.00	1	0	1	0	0
..............................................................................................................................................................TTCATTTCGCAGCGGGGAGAGGC.....................................................................	23	1	1.00	1	1	0	0	0
.................................................................AACGATGAGGACGGCGCCAT.....................................................................................................................................................................	20	1	1.00	1	0	1	0	0
....................................................................................................................GATATGTTGGTCTGCAAGGTGGT...............................................................................................................	23	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................CGAGGTGCTGTGCGGCCAGAAT.............................	22	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................GTGCGGCCAGAATCTGGTGTGGAT..................	24	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................CGAGGTGCTGTGCGGCCAGA...............................	20	1	1.00	1	0	0	1	0
............................................................................................................................................................GATTCATTTCGCAGCGGGGAGAGGCA....................................................................	26	1	1.00	1	0	1	0	0
...........................................................................................................................................................................................................GTGCTGTGCGGCCAGAAT.............................	18	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................GGATCAAGTGCTACGACCATGT	22	1	1.00	1	1	0	0	0
.................................................................................................................................................................................................CATCTTCGAGGTGCTGTGC......................................	19	1	1.00	1	0	0	1	0
........................................................................................ATACGTGGGCAGGGCGGAGC..............................................................................................................................................	20	1	1.00	1	0	1	0	0
....................................................................................................................GATATGTTGGTCTGCAAGGTG.................................................................................................................	21	1	1.00	1	0	0	0	1

dm3

CAGCCTACAAGTGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCGAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCACTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................CTTCCCGAGGAGGCAGTGGTGGGC............................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0
....................................................................................................................GATATGTTGGTCTGCAAGGTGGT...............................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................ACGAGGGCGATATGTTGGT...........................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................ATATGTTGGTCTGCAAGGTGGT...............................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................GTGCGGTCAGAATCTGGTGTG.....................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................AGCGAGGAGAGGCACTGC................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0
.......................................................GGTGGGCGGCAACGATGA.................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................GGCAACGATGAGGACGGC..........................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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.............................................................................................................................................................................................................GCTGTGCGGTCAGAATCTGGTGT......................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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......................................................................................................................TATGTTGGTCTGCAAGGTGGT...............................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
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....................................................................GATGAGGACGGCGCCATG....................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................TGGGATTCATTTCGCAGCGAG............................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................AGGACGGCGCCATGATAAGG..............................................................................................................................................................	20	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

CAGCCTACAAGTGGGTTCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATATACGTGGGCAGGGCGGAGCACGAGGGCGATATGCTGGTCTGCAAGGTGGTGCCCAGCAAGCAATTGGGATTCATTTCGCAGCGGGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATGAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............................................................GGCAACGATGAGGACGGCGCCATG....................................................................................................................................................................	24	1	3.00	3	1	0	0	0	2	0	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGCCA.................................	21	1	2.00	2	1	0	0	0	1	0	0
..............................................................GGCAACGATGAGGACGGCGCC.......................................................................................................................................................................	21	1	2.00	2	1	0	0	0	1	0	0
.......................................................................................................................................................ATTGGGATTCATTTCGCAGCGGGGAG.........................................................................	26	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................................TCGAGGTGCTGTGCGGCCAGAAT.............................	23	1	1.00	1	0	0	0	0	1	0	0
..........................................................GGGCGGCAACGATGAGGAC.............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
......................................................................................ATATACGTGGGCAGGGCGGAGCAC............................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................................................................................TCTGGTGTGGATGAAGTGCTAC........	22	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................................................AAGGACATCTTCGAGGTGCT..........................................	20	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGC...................................	19	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................TGGGATTCATTTCGCAGCGGGGAGA........................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................CTGGTGTGGATGAAGTGCTAC........	21	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................AAGCAATTGGGATTCATTTCGCAGC...............................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..........................................CCGAGGAGGCAGTGGTGGG.............................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.............................................................CGGCAACGATGAGGACGGCGC........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
..............................................................GGCAACGATGAGGACGGC..........................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................ATCTGGTGTGGATGAAGTGCTA.........	22	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................GTGGATGAAGTGCTACGACCATGT	24	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGCCAGA...............................	23	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................GAGGGCGATATGCTGGTCTGCAAGGT..................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................................ACATCTTCGAGGTGCTGTGCGGCCA.................................	25	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................TCTTCGAGGTGCTGTGCGGCCAGA...............................	24	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................GTGGATGAAGTGCTACGACC....	20	1	1.00	1	0	1	0	0	0	0	0
.................................................................................................................................................................ATTTCGCAGCGGGGAGAGGC.....................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................................................GAATCTGGTGTGGATGAAGTGCTAC........	25	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................CGAGGTGCTGTGCGGCCAGA...............................	20	1	1.00	1	0	0	0	0	1	0	0
.............GGTTCAATCCTCGGCCTACT.........................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
..................................CTCCCTTCCCGAGGAGGCAGTGGT................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
.................CAATCCTCGGCCTACTCCTCC....................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
......................................CTTCCCGAGGAGGCAGTGGTGGGC............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................AGCAAGCAATTGGGATTCATTTCGC..................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................TGGGATTCATTTCGCAGCGGG............................................................................	21	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................GATATGCTGGTCTGCAAGGT..................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................ATCTTCGAGGTGCTGTGCGGCCA.................................	23	1	1.00	1	0	0	0	0	1	0	0
..........................................................................................................GCACGAGGGCGATATGCTGGTCTGC.......................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0
............................................................................................................ACGAGGGCGATATGCTGGTCTGCAAGGT..................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGCC..................................	20	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................GGGCGATATGCTGGTCTG........................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.....................................CCTTCCCGAGGAGGCAGTGGT................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................GAGAGGCCCTGCCCAAGGACAT......................................................	22	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................GGGCGGAGCACGAGGGCG.....................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..............................................................GGCAACGATGAGGACGGCGC........................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................TTCGCAGCGGGGAGAGGCCCTG.................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..................................CTCCCTTCCCGAGGAGGCAGTGGTGG..............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
..............GTTCAATCCTCGGCCTACTCCTCC....................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
............................................................................................................................................................GATTCATTTCGCAGCGGGGAGA........................................................................	22	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................GGTCTGCAAGGTGGTGCCC...........................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................GATATGCTGGTCTGCAAGGTGGT...............................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
............................................................................................GTGGGCAGGGCGGAGCACGAGGGC......................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................ATTCATTTCGCAGCGGGGAGAGGCCC...................................................................	26	1	1.00	1	0	0	0	0	1	0	0
............GGGTTCAATCCTCGGCCTACT.........................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.............................................................CGGCAACGATGAGGACGGC..........................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
......................................................................................................................................................AATTGGGATTCATTTCGCAGCGGG............................................................................	24	1	1.00	1	1	0	0	0	0	0	0
......................................CTTCCCGAGGAGGCAGTGGT................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................AAGCAATTGGGATTCATTTC....................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................ATTCATTTCGCAGCGGGGAGA........................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................TCTTCGAGGTGCTGTGCGGCC..................................	21	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................ATCTGGTGTGGATGAAGT.............	18	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................AATTGGGATTCATTTCGCAGCGGGGA..........................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................GCGGGGAGAGGCCCTGCCCAAGG..........................................................	23	1	1.00	1	0	1	0	0	0	0	0
................................................................................................................................................................................................................................GTGTGGATGAAGTGCTACGACCATGT	26	1	1.00	1	1	0	0	0	0	0	0

droYak3

CAGCCTACAAGTGGGTTCAGTCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTACGTGGGCAGGGCGGAGCACGAGGGCGACATGTTGGTCTGCAAGGTGGTGCCCAGCAAGCAACTGGGATTCATTTCGCAGCGAGGAGAGGCCGTGCCCAAGGACATCTTCGAGGTGCTTTGCGGCCAGAACCTGGTGTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................................................................................................................................................................................................................CAGAACCTGGTGTGGATCAAGT.............	22	1	3.00	3	0	1	0	1	0	0	1	0	0	0	0
.............................................................................................................................................................ATTCATTTCGCAGCGAGGAGAGGC.....................................................................	24	1	3.00	3	0	1	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................................CATCTTCGAGGTGCTTTGCGGC...................................	22	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...................GTCCTCGGCCTACTCCTCCCTTCCCGA............................................................................................................................................................................................................	27	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTTCGAGGTGCTTTGCGGC...................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
......................................CTTCCCGAGGAGGCAGTGGTGGG.............................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTCGAGGTGCTTTGCGGC...................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................ACGAGGGCGACATGTTGGTCTGCAAGGT..................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................GATTCATTTCGCAGCGAGGAGAG.......................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................CAACGATGAGGACGGCGCCAT.....................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................CTTCCCGAGGAGGCAGTGGT................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................ATCAAGTGCTACGACCATGT	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................AGCGAGGAGAGGCCGTGCC...............................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................GTGGATCAAGTGCTACGACC....	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................CTTCCCGAGGAGGCAGTGGTGGGCG...........................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................GGACATCTTCGAGGTGCTTTGCGGC...................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................AGGGCGGAGCACGAGGGC......................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................CATGTTGGTCTGCAAGGTG.................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................GCACGAGGGCGACATGTTGGT...........................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................GACATGTTGGTCTGCAAGGT..................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................ACCTGGTGTGGATCAAGTGCTACGAC.....	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................AGGGCGGAGCACGAGGGCGACAT.................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................TTCGCAGCGAGGAGAGGCC....................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................GAGGAGAGGCCGTGCCCAA............................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................ATTTCGCAGCGAGGAGAGGC.....................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................GGATTCATTTCGCAGCGAGGAGA........................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............GTTCAGTCCTCGGCCTACTC........................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................GAACCTGGTGTGGATCAAGT.............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................GCGAGGAGAGGCCGTGCCCAAGGAC........................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............GGGTTCAGTCCTCGGCCTACTCCTCCC...................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................AGCGAGGAGAGGCCGTGCCCAAGGA.........................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................CGAGGGCGACATGTTGGTCTGC.......................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
................................................................CAACGATGAGGACGGCGCC.......................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................CAGTCCTCGGCCTACTCCTCC....................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................CCTCGGCCTACTCCTCCCTTCCCGAGG..........................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTCGAGGTGCTTTGCGGCC..................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GTGGATCAAGTGCTACGAC.....	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............GTTCAGTCCTCGGCCTACTCCTCC....................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................AGGGCGGAGCACGAGGGCGAC...................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................GGTGGTGCCCAGCAAGCAACTGG..............................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................GCTTTGCGGCCAGAACCTGGTGT......................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................GTGGATCAAGTGCTACGACCATGT	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................GATCAAGTGCTACGACCAT..	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................CGAGGGCGACATGTTGGTCT.........................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................CATGATTTACGTGGGCAGGGC...................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................CCAAGGACATCTTCGAGGTGC...........................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................TCCCGAGGAGGCAGTGGTGGGC............................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................CAGAACCTGGTGTGGATCAAGTG............	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

CAGCCTACAAATGGGTACAATCCTCGGCCTATTCCTCTCTACCCGAGGAGGCAGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGAGGGCGATATGTTGGTCTGCAAGGTGGTGCCCAGCAAGCAATTGGGATTCATTTCCCAGCGTGGAGAAGCCCTACCCAAGGATATCTTCGAAGTGCTGTGCGGTCAGAATCTGGTGTGGATTAAGTGCTATGATCATGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CAGCCTACAAGTGGGTGCAATCTTCGGCCTACTCCTCCCTACCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATCTACGTGGGCAGGGCGGAGCACGAGGGCGACATGTTGGTCTGCAAGGTGGTGCCTAGCAAGCAGCTGGGATTCATTTCGCAGCGGGGCGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAACCTGGTGTGGATCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAGCCTACAAGTGGGTGCAATCTTCGGCCTACTCCTCCCTTCCCGAGGAGGCGGTGGTGGGCGGGAACGATGAGGACGGCGCCATGATTTACGTGGGCAGGGCGGAGCACGAGGGCGACATGCTGGTCTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCATTTCGCAGCGTGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CAGCCTACAAGTGGGTACAATCCTCGGCCTACTCGTCTCTTCCCGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGACGGCGACATGCTGGTGTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCGTTTCGCAGCGTGGAGAAGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCCTCCCTTCCCGAGGAGGCAGTGGTGGGCGGAAACGATGAGGACGGCGCCATGATTTATGTGGGCAGGGCGGAGCACGAGGGCGACATGCTGGTGTGCAAGGTGGTGCCCAGCAAGCAGCTGGGATTCATTTCGCAGCGAGGAGAGGCCCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCATCGATTCCGGAGGAGGCGGTGGTGGGCGGCAACGATGAGGACGGCGCCATGATTTACGTGGGACGGGCGGAACACGACGGCGACATGCTGGTGTGCAAGGTGGTTCCCAGCAAGCAACTCGGATTCATTTCCCAGCGAGGAGAAGCGCTGCCCAAGGACATCTTCGAGGTGCTGTGTGGTCAGAATCTGGTGTGGATCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAGCCTACAAGTGGGTGCAATCCTCGGCCTACTCCTCCATTCCCGAGGAAGCTGTGGTCGGGGGTAACGATGAAGATGGCGCCATGATCTACGTGGGCAGAGCAGAGCACGAGGGCGATATGCTAGTGTGCAAGGTAGTGCCCTCGAAGCAGCTTGGCTTCATTTCGCAGCGCGGCGAGGCCCTGCCCAAGGACATTTTTGAGGTGCTTTGTGGCCAAAATCTGGTGTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CAGCCTACAAATGGGTGCAATCCTCGGCCTACAGCTCCATACCCCCGGAGGCAGTGGTGGGCGGGAATGACGAGGATGGAGCCATGATCTACGTGGGCAGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGGTGCCCACCAAGCAGCTCGGATTCATATCCCAGCGCGGCGAGGCTCTGCCCAAGGACATCTTCGAGGTGCTGTGCGGCCAGAATCTGACATGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............................................GAGGCAGTGGTGGGCGGGAAT......................................................................................................................................................................................	21	1	4.00	4	1	0	0	0	1	2
...............................................GAGGCAGTGGTGGGCGGGA........................................................................................................................................................................................	19	1	3.00	3	1	0	0	0	1	1
...........................................................................ATGGAGCCATGATCTACGT............................................................................................................................................................	19	1	2.00	2	0	0	0	0	1	1
..............................................................GGGAATGACGAGGATGGAGC........................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
..............................................................................................................................................................TTCATATCCCAGCGCGGCGAGGC.....................................................................	23	1	2.00	2	1	0	0	0	1	0
....................................................AGTGGTGGGCGGGAATGACGAG................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	1	1
...........................................................................................................................................................................................CAAGGACATCTTCGAGGTGCT..........................................	21	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................CACCAAGCAGCTCGGATTCATATCCCA.................................................................................	27	1	1.00	1	0	0	0	0	0	1
..............................................GGAGGCAGTGGTGGGCGGGAA.......................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGCCA.................................	21	1	1.00	1	1	0	0	0	0	0
....CTACAAATGGGTGCAATCC...................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
................................................AGGCAGTGGTGGGCGGGAA.......................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................ACATGCTCGTCTGCAAGG...................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................TTCATATCCCAGCGCGGCGAGGCTCTGCC...............................................................	29	1	1.00	1	0	1	0	0	0	0
................................................AGGCAGTGGTGGGCGGGAAT......................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................TCATATCCCAGCGCGGCGAGGCTCT..................................................................	25	1	1.00	1	0	1	0	0	0	0
.................................................GGCAGTGGTGGGCGGGAA.......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.....................................................................................GATCTACGTGGGCAGGGCGGA................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................CTGCCCAAGGACATCTTCGAGGTGC...........................................	25	1	1.00	1	0	1	0	0	0	0
.............................................................CGGGAATGACGAGGATGGAGCCATG....................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
.....................................CATACCCCCGGAGGCAGTGGTGGGCGG..........................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................GGTGCTGTGCGGCCAGAATCTGACATG.....................	27	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................TCCCAGCGCGGCGAGGCTCTGC................................................................	22	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................CTTCGAGGTGCTGTGCGGCCAGAAT.............................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................GGCGAGGCTCTGCCCAAGGAC........................................................	21	1	1.00	1	0	1	0	0	0	0
.................................................................................................CAGGGCGGAGCACGAGGG.......................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
..............................................GGAGGCAGTGGTGGGCGGG.........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
.......................................................GGTGGGCGGGAATGACGAGGATGGAGC........................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................GACATCTTCGAGGTGCTGTGCGGCC..................................	25	1	1.00	1	0	0	0	0	1	0
.............................................................................................................................................................................GGCGAGGCTCTGCCCAAGGACAT......................................................	23	1	1.00	1	1	0	0	0	0	0
.................................................................................................................GGCGACATGCTCGTCTGCAAGGT..................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................GGATCAAGTGCTACGACC....	18	1	1.00	1	0	1	0	0	0	0
................................................................................GCCATGATCTACGTGGGC........................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................GGCCAGAATCTGACATGG....................	18	1	1.00	1	0	1	0	0	0	0
.............................................................................GGAGCCATGATCTACGTGGG.........................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................GCGGCGAGGCTCTGCCCAAGGAC........................................................	23	1	1.00	1	1	0	0	0	0	0
.......................................................................................................GGAGCACGAGGGCGACATGCTC.............................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................CGAGGTGCTGTGCGGCCAGA...............................	20	1	1.00	1	0	1	0	0	0	0
........................................................................................CTACGTGGGCAGGGCGGA................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................AGCGCGGCGAGGCTCTGCCCAAG...........................................................	23	1	1.00	1	1	0	0	0	0	0
.................................GCTCCATACCCCCGGAGGCA.....................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...............................................GAGGCAGTGGTGGGCGGGAATG.....................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.....................................................................................GATCTACGTGGGCAGGGCGGAGC..............................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
..................................................................ATGACGAGGATGGAGCCATGAT..................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................GCCCACCAAGCAGCTCGGATT..........................................................................................	21	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................CTCGTCTGCAAGGTGGTGCCCA..........................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............................................................CGGGAATGACGAGGATGGAGCC.......................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................GGTGCCCACCAAGCAGCTCGGA............................................................................................	22	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................GAGGCTCTGCCCAAGGACATCTTCGAG...............................................	27	1	1.00	1	1	0	0	0	0	0
...............................................GAGGCAGTGGTGGGCGGGG........................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0	0

droBip1

CAGCCTACAAATGGGTGCAATCCTCGGCCTACAGTTCCATTCCCCCGGAGGCAGTTGTGGGCGGGAATGATGAGGACGGCGCCATGATCTACGTGGGAAGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGGTGCCCACCAAACAGCTCGGATTCATCTCCCAGCGCGGCGAGGCTCTGCCCAAGGACATCTTTGAGGTCCTGTGTGGTCAGAATCTGGCCTGGATCAAGTGCTACGACCATGT	Size	Hit Count	Total Norm	Total
No Reads

dp5

CAGCCTACAAATGGGTACAGTCCTCGGCCTACTCTTCCATCCCTGAGGACGCTGTGGTTGGCGGCAACGACGAGGACGGCGCAATGATCTACGTGGGCCGGGCCGAGCACGAAGGCGACATGATGGTCTGCAAGGTGGTGCCCTCCAAGCAGATCGGATTCGTCTCCAATCGCGGCGAGGCGCTGCCCAAGGACATCTTCGAGATGCTGTGTGGTCAGAACCTGGTGTGGGTTAAATGCTACGACCACGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................................................................................................................GACATGATGGTCTGCAAGGT..................................................................................................................	20	1	7.00	7	0	4	0	0	3	0	0	0	0	0
....................................................................................................................GACATGATGGTCTGCAAGGTG.................................................................................................................	21	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................GCCGAGCACGAAGGCGACATGATGGTCT.........................................................................................................................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............................................................................CGCAATGATCTACGTGGGCC.......................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.......................................................GGTTGGCGGCAACGACGAG................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CGAGATGCTGTGTGGTCAGAAC.............................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GGTCAGAACCTGGTGTGGG...................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................ATGCTGTGTGGTCAGAACCTGGTGTG.....................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................GACATGATGGTCTGCAAGGTGGTGCC............................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GGTCAGAACCTGGTGTGGGTTAAATG............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................GCAAGGTGGTGCCCTCCAA......................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTTCGAGATGCTGTGTGGTC..................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................GTCTCCAATCGCGGCGAGGCGCTGCCC..............................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GTCAGAACCTGGTGTGGGTT.................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................ACATGATGGTCTGCAAGGT..................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................GGCCTACTCTTCCATCCCTGAGGA.........................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................GACATGATGGTCTGCAAGG...................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................GACATGATGGTCTGCAAGGTGGTGC.............................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTTCGAGATGCTGTGTGGT...................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTAAATGCTACGACCACGT	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................GATCTACGTGGGCCGGGCCGAGC..............................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	1
................................................................................................................................................................................................ACATCTTCGAGATGCTGTGTG.....................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................GGTGCCCTCCAAGCAGATCGGATT..........................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..........................................................................GACGGCGCAATGATCTACGT............................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................GGTTGGCGGCAACGACGAGGACGG...........................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................GGCCTACTCTTCCATCCCTGAG...........................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................GCAATGATCTACGTGGGCCGG.....................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................TCCTCGGCCTACTCTTCCA...................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGTGTGGGTTAAATGCTACGAC.....	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTTCGAGATGCTGTGTG.....................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................GGCGACATGATGGTCTGCAAGGT..................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................GTCAGAACCTGGTGTGGG...................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTTCGAGATGCTGTGTGGTCA.................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................CGGCGCAATGATCTACGTGGGCC.......................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................GACATGATGGTCTGCAAGGTGGT...............................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................AGAACCTGGTGTGGGTTAAAT.............	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................GCTGTGTGGTCAGAACCTGGT........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................GATCGGATTCGTCTCCAATC...............................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGCGGCGAGGCGCTGCCCAAGGA.........................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................GACGGCGCAATGATCTACGTGGGC........................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................ACGAAGGCGACATGATGGT...........................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TTCGAGATGCTGTGTGGTCAG................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................CAATCGCGGCGAGGCGCTGC................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................GCCGAGCACGAAGGCGACATGATG.............................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................GTGCCCTCCAAGCAGATCGGATTCGT.......................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................GACGCTGTGGTTGGCGGCAACGA....................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................ACGAAGGCGACATGATGGTCTG........................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................................GTTGGCGGCAACGACGAG................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................ACGAAGGCGACATGATGGTCT.........................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................CTGCAAGGTGGTGCCCTCCAA......................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................GGGCCGGGCCGAGCACGAAGGC......................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................CAAGCAGATCGGATTTT........................................................................................	17	20	0.05	1	0	0	0	0	0	0	0	0	1	0

droPer2

CAGCCTACAAATGGGTACAGTCCTCGGCCTACTCTTCCATCCCTGAGGACGCTGTGGTGGGCGGCAACGACGAGGACGGTGCAATGATCTACGTGGGCCGGGCCGAGCACGAAGGCGACATGATGGTCTGCAAAGTGGTGCCCTCCAAGCAGATCGGATTCGTCTCCAATCGCGGCGAGGCGCTGCCCAAGGACATCTTCGAGATGCTGTGTGGTCAGAACCTGGTGTGGGTTAAATGTTACGACCACGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................GCAATGATCTACGTGGGCC.......................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................GGTGCCCTCCAAGCAGATCGGATTC.........................................................................................	25	1	1.00	1	1	0	0	0	0	0
.....................................CATCCCTGAGGACGCTGT...................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................GTGTGGTCAGAACCTGGTGTGGGC..................	24	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................CAATCGCGGCGAGGCGCTGCCCAA............................................................	24	1	1.00	1	0	1	0	0	0	0
...........................................................GGCGGCAACGACGAGGAC.............................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................GCTGTGTGGTCAGAACCTGGTGTGG....................	25	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................GTGTGGTCAGAACCTGGTGTGGGT..................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................TAAATGTTACGACCACGT	18	1	1.00	1	1	0	0	0	0	0
...............................CTCTTCCATCCCTGAGGACGCTGTG..................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................TGCAATGATCTACGTGGGC........................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................GCTGTGTGGTCAGAACCTGGTGT......................	23	1	1.00	1	0	0	0	0	0	1
..........................................................................................................GCACGAAGGCGACATGATGGT...........................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
..............................................GGACGCTGTGGTGGGCGGC.........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..................................................GCTGTGGTGGGCGGCAACGACGAG................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0

droWil2

CAGCTTACAAATGGGTGCAATCTTCGGCGTATTCCTCGATACCAGCTAATGCCGTGGTGGGTGGCAACGATGAAGATGGCGCCATGATCTATGTGGGCCGTGCAGAGCATGAGGGTGATATGCTAGTCTGCAAAGTAGTTCCATCAAAGCAACTGGGCTTTGTCTCACAGCGTGGCGAAGCTCTGCCCAAGGATATATTCGAGGTGCTCTGTGGTCTGAATTTGACATGGAGAAAGTGCTACGATCACAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...............................................................................................................................................................................................GATATATTCGAGGTGCTCTGTGGTCTGA...............................	28	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................ATATTCGAGGTGCTCTGT......................................	18	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................................................................................GACATGGAGAAAGTGCTACGAT.....	22	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................CTGAATTTGACATGGAGAA................	19	1	1.00	1	1	0	0	0	0
..............................................................................................GGGCCGTGCAGAGCATGAGGGT......................................................................................................................................	22	1	1.00	1	0	1	0	0	0
..................................................................................CATGATCTATGTGGGCCGTGCAG.................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
.............................................CTAATGCCGTGGTGGGTGGCAACGATG..................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
........................................................................................CTATGTGGGCCGTGCAGAGC..............................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..................................................................................................CGTGCAGAGCATGAGGGT......................................................................................................................................	18	1	1.00	1	0	0	0	1	0
......................................................................................................................................................AACTGGGCTTTGTCTCACAGCGTG............................................................................	24	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................ATTCGAGGTGCTCTGTGGTCT.................................	21	1	1.00	1	0	0	0	1	0
.........AATGGGTGCAATCTTCGGCGT............................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...........................................AGCTAATGCCGTGGTGGGT............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
........................................................................................CTATGTGGGCCGTGCAGAGCATGAG.........................................................................................................................................	25	1	1.00	1	0	0	1	0	0
................GCAATCTTCGGCGTATTCCTCGA...................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
...................................................................................................GTGCAGAGCATGAGGGTGATATG................................................................................................................................	23	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................GCTCTGCCCAAGGATATATTCGAGGT.............................................	26	1	1.00	1	0	0	1	0	0
...................................................................................................GTGCAGAGCATGAGGGTGAT...................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.............................................................................................................................................CATCAAAGCAACTGGGCTT..........................................................................................	19	1	1.00	1	0	0	0	1	0
..........................................CAGCTAATGCCGTGGTGGGT............................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
............................................GCTAATGCCGTGGTGGGTG...........................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................ATATATTCGAGGTGCTCTGTG.....................................	21	1	1.00	1	0	0	1	0	0
........................................................................AAGATGGCGCCATGATCTATGTG...........................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................CACAGCGTGGCGAAGCTCTGCCCAAGGA.........................................................	28	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................ATTCGAGGTGCTCTGTGGTC..................................	20	1	1.00	1	0	0	0	1	0
...................................................................................................GTGCAGAGCATGAGGGTGATAT.................................................................................................................................	22	1	1.00	1	0	0	1	0	0
.....................................................................................................GCAGAGCATGAGGGTGATAT.................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.............................................CTAATGCCGTGGTGGGTGGC.........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
.........................................CCAGCTAATGCCGTGGTGGGT............................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.......................................................GGTGGGTGGCAACGATGAAGATGGC..........................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................ATATTCGAGGTGCTCTGTGGTCTGAA..............................	26	1	1.00	1	1	0	0	0	0
......................................ATACCAGCTAATGCCGTGGTGGGT............................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................ATGGAGAAAGTGCTACGAT.....	19	1	1.00	1	0	0	1	0	0
..............................................................GGCAACGATGAAGATGGCGCCATGAT..................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
........................CGGCGTATTCCTCGATACC...............................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................TATATTCGAGGTGCTCTGTG.....................................	20	1	1.00	1	0	0	1	0	0
.....................................................................................GATCTATGTGGGCCGTGCAGAGC..............................................................................................................................................	23	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................ATATTCGAGGTGCTCTGTGGTC..................................	22	1	1.00	1	0	0	1	0	0
...........................................................................ATGGCGCCATGATCTATGTGGGC........................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................ATATTCGAGGTGCTCTGTGGT...................................	21	1	1.00	1	0	1	0	0	0
.....................................................................................GATCTATGTGGGCCGTGCAGAGCAT............................................................................................................................................	25	1	1.00	1	0	0	1	0	0

droVir3

CAGCCTACAAATGGGTGCAGTCGTCGGCGTACTCCTCGATACCGCCGAACGCCGTTGTGGGCGGCAATGATGAGGATGGCGCCATGATCTATGTGGGCCGGGCGGAGCATGAGGGCGATATGCTCGTCTGCAAGGTGGTGCCCACCAAGCAGATCGGCTTTGTATCGCAGCGCGGCGAGGCACTGCCCAAGGACATATTCGAGATACTGTGCGGCGAGAATCTAGTCTGGGTCAAGTGCTACGATCACGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........AATGGGTGCAGTCGTCGGC..............................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
....................................................................................................................GATATGCTCGTCTGCAAGGT..................................................................................................................	20	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CGAGATACTGTGCGGCGAGAAT.............................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................AATCTAGTCTGGGTCAAGTGCTACGA......	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................TGATGAGGATGGCGCCATGATC.................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................ATGATCTATGTGGGCCGG.....................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AGCATGAGGGCGATATGCTC.............................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CTGTGCGGCGAGAATCT...........................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......CAAATGGGTGCAGTCGTCGGC..............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................GCCCACCAAGCAGATCGGCTTT.........................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................ACCGCCGAACGCCGTTGTGGGCGGCA........................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GTACTCCTCGATACCGCC............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
......................................................................................................................TATGCTCGTCTGCAAGGT..................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................ATATGCTCGTCTGCAAGG...................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................GGCGGCAATGATGAGGATGGCGCC.......................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................ATGAGGGCGATATGCTCGTCTGCAAGGT..................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CAGCCTACAAATGGGTGCAGTCGTCGGC..............................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................ATATGCTCGTCTGCAAGGT..................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................GGCGTACTCCTCGATACCGCCGAAC........................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................AAGGACATATTCGAGATACTGTGCGGC...................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................GTGCCCACCAAGCAGATCGG.............................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...................................................................................ATGATCTATGTGGGCCGGGCGGA................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................AGATACTGTGCGGCGAGAA..............................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droMoj3

CAGTCTACAAATGGGTTCAATCGTCGGCGTATTCGTCGATACCGCCAAACGCCATTGTGGGTGGCAACGATGAGGACGGCGCCATGATCTATGTGGGCCGGGCGGAGCACGAGGGCGACATGCTCGTCTGCAAGGTGATGCCATCGAAGCAAATCGGCTATATTTCGCAACGGGGCGAGGCTCTGCCCAAGGACATATTCGAAATACTGTGCGGCGAGAATCTGGTGTGGGTCAAGTGCTACGACCACGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................................................................................................................................................................................................................GTGCGGCGAGAATCTGGTGTGGGT..................	24	1	1.00	1	1	0	0	0	0	0
........................................................GTGGGTGGCAACGATGAGGACG............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.................CAATCGTCGGCGTATTCGTC.....................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........AAATGGGTTCAATCGTCGGC..............................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................GATGCCATCGAAGCAAATCGG.............................................................................................	21	1	1.00	1	0	0	0	0	0	1
.....................................GATACCGCCAAACGCCATTGTG...............................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......................................ATACCGCCAAACGCCATTGTGGGT............................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
....................................................................................................................GACATGCTCGTCTGCAAGG...................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
..............................................................GGCAACGATGAGGACGGCGCCATGA...................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................GTCTGCAAGGTGATGCCATCGAAGC....................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.........AATGGGTTCAATCGTCGGC..............................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................AACGGGGCGAGGCTCTGCC...............................................................	19	1	1.00	1	1	0	0	0	0	0
..................................GTCGATACCGCCAAACGCCATTGT................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..............................ATTCGTCGATACCGCCAAACGCCATT..................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................ATTCGAAATACTGTGCGGCGAGAAT.............................	25	1	1.00	1	0	0	0	0	0	1
....................................................................GATGAGGACGGCGCCATGATC.................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
......................................................................................................................CATGCTCGTCTGCAAGGTGATGC.............................................................................................................	23	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................TGTGGGTCAAGTGCTACGA......	19	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................ATCGGCTATATTTCGCAAC...............................................................................	19	1	1.00	1	1	0	0	0	0	0

droGri2

CAGCTTACAAATGGGTGCAGTCCTCGGCGTATGCATCGCTGCCACAACATGCCGTTGTCGGTGGCAATGATGAGGATGGCGCCATGATATATGTGGGTCGGGCGGAGCACGATGGCAACATGCTCGTCTGCAAGGTGGTGCCCAGCAAGCAGATCGGCTACATTTCGCTGCGCGGCGAAGCGCTGCCCAAGGACAAGTTCGAGATGTTGTGCGGCGAGAATCTGGCATGGAGCAAGTGCTACGATCATGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.................................................................AATGATGAGGATGGCGCCATG....................................................................................................................................................................	21	2	0.50	1	1	0
......................................................................................................................................................................................................................CGAGAATCTGGCATGGAGC.................	19	2	0.50	1	0	1
.............................................AACATGCCGTTGTCGGTGGCAAT......................................................................................................................................................................................	23	2	0.50	1	1	0

dsi_1341

2r:9515855-9516004 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-44.7	-44.6	-44.6