ID:

dsi_13405

 Coordinate:

2r:15995889-15996038 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.8

Flybase annnotation

five_prime_UTR [2r_15995108_15995888_+]; exon [2r_15995108_15995888_+]; intron [2r_15995889_15996899_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTTTTCAGCTTTAGCTTTTCTTGGGCCGATCGGAAATTGTATTTGATTGGTAAGTACAAGAAGTGGCAGCACCATAACCAGCAAATCAATACTTGGGCTGCCATTCCGTTTCGTTCCGTTCGTTAGTTTTCCTAGCCCATTCGTTGGCGCTCTCTCTTTTCCCCCACTCTCTCTTTCTCTTCCCCGAAAGAGAGCGAAAACCCCCCGCCCGCCCACACTCGGTGTATGTGTGCTTTGTAACAACGAGTA
**********************************************************************************....(((((...(((((((...........((.......))..........)))))))...)))))..**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 O002
Head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
......CAGCTTTAGCTTTTCTTGGGC............................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................................................CAAATCAATACTTGGGCTGCC................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....................................................ACGTACAAGTAGTGGGAGCACC................................................................................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................GATCGGAAATTGTATTTG............................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................GATTGGTAAGTACAAGAAGTG........................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCCTAGCCCATTCGTTGGCG.................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................AGCAAATCAATACTTGGGCT...................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..................TTCTTGGGCCGATCGGAAA..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......AGCTTTAGCTTTTCTTGGGCCGATCGGA....................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
................TTTTCTTGGGCCGATCGGAAA..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..........TTTAGCTTTTCTTGGGCCGATCGGAAA..................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................ATCAATACTTGGGCTGCCATT................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................TCTTGGGCCGACCTGAAA..................................................................................................................................................................................................................... 18 2 3 0.67 2 0 0 0 0 0 0 0 2 0 0 0 0
..........................................................................................................................................................................TCTCTTTCTCTTCCCCAA.............................................................. 18 1 2 0.50 1 0 0 0 0 0 0 0 0 1 0 0 0
..................................................GTACGTACAAGCAGTGGGAGC................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1 0 0
....................................................................................................GCCAATTCGTTTCGTGCCGT.................................................................................................................................. 20 3 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................................GTACGTACAAGCAGTGGGA..................................................................................................................................................................................... 19 3 10 0.20 2 0 0 0 0 0 0 0 1 0 0 1 0
..................................................................................................................................................................................................................CGCCCACTCTCGGAGTA....................... 17 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 1
..................................................GTACGTACAAGCAGTGG....................................................................................................................................................................................... 17 2 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0 0
....................GTTGGGCCGATCGGATA..................................................................................................................................................................................................................... 17 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................AGCCATTCCGTTTCG........................................................................................................................................ 15 1 19 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0
...................................................TACGTACAAGCAGTGGGA..................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CGAAAAGTCGAAATCGAAAAGAACCCGGCTAGCCTTTAACATAAACTAACCATTCATGTTCTTCACCGTCGTGGTATTGGTCGTTTAGTTATGAACCCGACGGTAAGGCAAAGCAAGGCAAGCAATCAAAAGGATCGGGTAAGCAACCGCGAGAGAGAAAAGGGGGTGAGAGAGAAAGAGAAGGGGCTTTCTCTCGCTTTTGGGGGGCGGGCGGGTGTGAGCCACATACACACGAAACATTGTTGCTCAT
****************************************************************************************************....(((((...(((((((...........((.......))..........)))))))...)))))..********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M023
head
.............................................................................................AACCCGACGGTAAGGCAAAGC........................................................................................................................................ 21 0 1 2.00 2 0 0 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGCCACATACACACGAAACAT.......... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................CCCGGCTAGCCTTTAACATAA.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GGTGGGAGATACAGAGAAG................................................................... 19 3 20 0.25 5 0 0 0 0 4 0 0 0 0 1
................................................................................................................................................................................AGAGACGGGGCTTTCT.......................................................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................GGGTGAAAGAAAAAGCGAAGGG................................................................. 22 3 8 0.13 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................AAAGAAAGGCAAGCAA............................................................................................................................. 16 1 15 0.07 1 0 0 0 0 0 0 0 1 0 0
....................................................TTCATGTCCTTCACTGTTGT.................................................................................................................................................................................. 20 3 17 0.06 1 0 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................GGGCGGGCGGGTGGG............................... 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:15995839-15996088 + dsi_13405 GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTC--T---------------------------------------------CTCTTTCTCTTCCCCGAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCCCACA---------------------------------CTC-------------------G------G----TGTATGTGTGCTTTGTAACAACGAGTA
droSec2 scaffold_1:12860127-12860376 + GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------GTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTC--T---------------------------------------------CTCTTTCTCTTTCCCGAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCACATA---------------------------------CTA-------------------G------G----TGTATGTGTGCTTTGTAACAACGAGTA
dm3 chr2R:15344431-15344682 + GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCAA-----TCGGAAATT----GT-ATTTCATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTCAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCGTCAGTCTCT---------------------------------------------CTCTTTCTCTTCCCCAAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCCCACA---------------------------------CTC-------------------G------G----TGTATGTGTGCTTTGTAATAACGAGTA
droEre2 scaffold_4845:9542978-9543239 + GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----AT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTCTCT---------------------------------------------CTCTTTCTCTCTCCCGAA-----------------------------------------------------------AGAGAGCGAAAAAC---------------------------CCCCC-------GCCCGCCCCCA---------------------------------CTC-------------------G------GTGTATGTGTGCGTGCTTTGTAATAACGAGTA
droYak3 2R:13831635-13831896 - GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTTT------------------------CTTTTCCCCCACACTCT---------------------------------------------CTCTTTCTCTCTCCCGAA-----------------------------------------------------------AGAGAGCGAAAAGC---------------------------CCCCC-------GCCCGCCCCCA---------------------------------CTT-------------------G------GTGCATGTGTGCGTGCTTTGTAATAACGAGTA
droEug1 scf7180000409474:2611648-2611932 - GCTTTTTA---------------GCCTTAGCTTTTCCTTCACACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------T--------------------------------------------------------------TCTTTCTCTG--CCCAA-------------------------------AG--------------------------AGAGAGC--AAC-C---------------------------CCCCCGCCTG----CCGCCCCCAC-A--------CACT----A-----AAAAC----ACAG-TGTATCTCTGTAAGCGA--G--TG----TGTGTGCGTGCTTTGTAATAACGAGTA
droBia1 scf7180000302143:2832572-2832875 + GCTTTTCG---------------GCCACAGCTTTTC-CTCACACGCCTCTTCGGGCCGA-----TCGGAAATT----GT-GTTTGATTGGATTGGATTGGGTTGGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTGAGGGGCTGCCATTCTGTTTCGT-TCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGCTGGCGCTCTCTC-----------------------CTCCTGC--CTCTGTCT---------C-----------TCC-----------------------GG--CTCTCTCCCGAG-----------------------------------------------------------AGAGCGCC----GC---------------------------CCCGCGCCTGCCGCCCGCCCCCAC-A--------CACCAGATA-----AAC---------------------------G--G--TG----TGTGTGCGTGCTTTGTAACAACGAGTA
droTak1 scf7180000415910:164083-164362 - GCTTTTCG---------------GCCATAGCTTTTC-TTCACACGCCTCTTTGGGCCGA-----TCGGAAATT----AT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGCTGGCGCTCTCT--------------------------TCTCC-------TGC---------------------------------------------CTCTTGCTC--TCCCGAA-----------------------------------------------------------AGAGAGCC----GC---------------------------CCCCCGCCAGCCGCCCGCCCCCAC-A--------CACCAGATA-----AAC---------------------------G--G--TG----TGTGTGCGTGCTTTGTAATAACGAGTA
droEle1 scf7180000491201:1791700-1791951 + GCAA--CA---------------GCTATAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAGTTACATAT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCATGG--ATGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTC--------------------------------------------------------------------------ATG-----------------------------------------------------------AGAAAACGGA-------------------------------CCCCC-------GCCCGCCCCCAA-A--------CACCACCTA-----AAC---------------------------G-TC--TG----TGTGTGCGTGCTCTGTAATAACGAGTA
droRho1 scf7180000780066:299961-300211 - GCAA--CA---------------GCTAAAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCGTGG--ATGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTC--------------------------------------------------------------TT----------ATG-----------------------------------------------------------AGAAAACGGA-------------------------------CCCCC-------GCCCGCCCCCAA-A--------CACCACCTA-----AAC---------------------------C--GCCTG----TGTGTGCGTGCTTTGTAATAACGAGTA
droFic1 scf7180000454039:633912-634183 + GCCATAAC---------------GTTTTAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGTAAAGTACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCA------TGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCAC---------------------------------CCACTCTCT----TTTCCT-----------T--------------------------GCTCTCTTTCCCGAG-----------------------------------------------------------AGAGAGCC----GC---------------------------CCCCC-------GCCCGCCCCCAC-A--------CACCAAATA-----AAC---------------------------------TG----TGTGTGCGTGCTTTGTAATAACGAGTA
droKik1 scf7180000302471:1602426-1602752 + GCGACCAC---------------GTCCCCGCTTTTC--------------TT-GGCCGATCGGATCGGAAAAT----TT-ATTTGATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCACCGCCACCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTCCATTCCGCCTGCTCTC-TTTCGTTAGTTTTTCT-----TGCCCATTCGTTGGCGTTGTCT------------------------CTGCTCC--CACTCTCTCCCCTTTCCC-----------TCCCACTCTCTTGTCCGCCAA----------------CTGAG-------------------------------AGAGAGAGCAGAGAGGCGA--CCAGACC--------------ACCGCCCCCGCT------------------------------TCCGCCCGCGGCGGCCCAACGCAAAATA-----AAC------TC--------------------------T----TGTGTGCGTGCTTTGTA---ACGAGTA
droAna3 scaffold_13266:9935877-9936215 - GCAGCCAC---ATTACATACA--TATGT--------------ACGCCTTTTTGGCCCGA-----TCGGAAATT----GA-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAG---------------------------------------------------------------------------------------TCAGCAAATCAATACTTTAAGGGGCTGCCATTTCGTTTCGTTTCA-----TTTC-GTTCGTTAGTTTTCCTTCGTTGGGCCATTCGTTGGCGTTGGTG-------------T----------CT------------------------------------------------------------GCGCCTCTCTTTCCAGAGAGAGGAGAGCGCCCGCGAGCGAGAGAGCGAAAGAGAGA-C--------AAAGCTAGA-G--------------AGCGCCCCCGCTACCCTGTCCCTCCAC-CC--ACA----ACCCGA-CCC------ACCCAAGACAAAATAAAATAAAAGTTAACTC-------------------------TG----TGTGCGTGTGCTCTGTAATAACGAGTA
droBip1 scf7180000396427:1077544-1077871 - GCCTTGCCCACA-TACATACATATGTGT--------------ACGCCTTTTTGGCCCGA-----TCGGAAATT----TA-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAG---------------------------------------------------------------------------------------TCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCGTTTCGTTTCATTTC-GTTCGTTAGTTTTCCTTCGTTGGCCCATTCGTTGGCGTTGTCT------------------------CTGCTCC--CACTGCTG---------CTGCCAGCCTGCGCC-----------------------GCCTCTCTTT--CGAG-----------------------AGATGGAAAGAGAGAGC--------AAAG--ACA-A--------------AGCG-----------------------CCCCC-------GCTCTCCCCCAA-AAAGCCCAAGACAAAATAAAATAAAAGCCAAC---------------------------TC----TGTGTGCGTGCTCTGTAATAACGAGTA
dp5 3:6510274-6510588 - ACTTCTTC---------------GCCTC-------------------------GGCTGA-----TCGGAAATT----TC-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAGAGCGCCTCACCGCTCAGCGCCGCGCCGCTCTGCTCCGCGCAGTCGGACGGATGGGATGGCGAGTCGGGGC-AG--CCA------GCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTT--------------------CGTTAGTTTTTCT-----TTCCCATTCGTTGGCAGTACC--A----------GC----------CC--------CC---------------------------------GCCTTGTCCGCCAGC----------------------------------------------------------------------------AAC--------------ACCGCCCCCGCT------------------------------TCCGCCCA-----G-------CT--ATA-----AAAGC----GCTGCTGTATGTTCGTTAGTGTGTG--TG----TGTGTGTGTGCTCTGTAACAACGAGTA
droPer2 scaffold_2:6729837-6730152 - ACTTCTTC---------------GCC------------------------TCGGTCCGA-----TCGGAAATT----TC-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAGAGCGCCTCACCGCTCAGCGCCGCGCCGCTCTGCTCCGCGCAGTCGGACGGATGGGATGGCGAGTCGGGGC-AG--CCA------GCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTT--------------------CGTTAGTTTTTCT-----TTCCCATTCGTTGGCAGTACC--A----------GC----------CC--------CC---------------------------------GCCTTGTCCGCCAGC----------------------------------------------------------------------------AAC--------------ACCGCCCCCGCT------------------------------TCCGCCCA-----G-------CT--ATA-----AAAGC----GCTGCTGTGTGTTTGTGAGTGTATG--TG----TGTGTGTGTGCTCTGTAACAACGAGTA
droWil2 scf2_1100000004514:1307440-1307662 + GCATTTCA---------------C--TCAGGTC-TCTTGCGTGCGCGTAT-T----GGC-----TCGGAAATT----CTCATTTTATT---------------GGTAAGT-----ATAAATATAGTGAGTGG------AGAG-----------------------------GATGTG--------------------------------------------------------------------GCCAGCGCCA--------GCTAGCAAATCAATACTTTAAGGGGCTGCCATTCTGTTCGCATTCG-------CCGTTTCGTTAGTTTTTCT-----TTTCCATTCGTTGGCATCGTCG-------------C----------AA--------AC---------------------------------GCCTTGTCCGCCACCGTC------------------------------------------------------------------------------------------ACCAC-----------------------CGCC-------GCCC-----------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:15045883-15046191 + TATTGCAA---------------ATC-TAT-------GACCTAAT-----ATTGTTTAT-----TCAGGAATT----AT--TTTTATT---------------GGTAAGT-----AACA---TGGTGAATTCTCTCGTATATTGGGCTAAGCGCTATGGGCGAACCACAGAGCAAGA--------------------------------------------------------------------GC-AAGAAGA------AGAGCAGCAAATCAATATTTTAGGGGGCTGCCATTTCGTTGTT-TGCG-----CTGTGTTTCGCTAGTTTTTCT-----CTTCCATTCGCTGCCGCTGCGCCGCTGTCGCTGTCGTCTACCTTCGCTTTAGCCCCACGC---------------------------------CCT------------GTCAGCCCCCGTGGCACA-----------------------------------------------------------AGAAAA----------------------------------------------------------------------------TA-----AAC-----------------------------------------TCTGCGTGCTTTGTAATAACGAGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTC--T---------------------------------------------CTCTTTCTCTTCCCCGAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCCCACA---------------------------------CTC-------------------G------G----TGTATGTGTGCTTTGTAACAACGAGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......CA---------------GCTTTAGCTTTTC--------------TTGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
............................................................................................................................................................................................................................................................................CAAATCAATACTT----GGGCTGCC......................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
.........................................................GA-----TCGGAAATT----GT-ATTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
....................................................................................GATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
..........................................................................................................................................................................................................................................................................................................................................TTCCT-----AGCCCATTCGTTGGCG.......................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................AGCAAATCAATACTT----GGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.................................TTC--------------TTGGGCCGA-----TCGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.......A---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...............................TTTTC--------------TTGGGCCGA-----TCGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
.........................TTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
...............................................................................................................................................................................................................................................................................ATCAATACTT----GGGCTGCCATT...................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
droSec2
GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------GTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTC--T---------------------------------------------CTCTTTCTCTTTCCCGAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCACATA---------------------------------CTA-------------------G------G----TGTATGTGTGCTTTGTAACAACGAGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCAA-----TCGGAAATT----GT-ATTTCATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTCAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCGTCAGTCTCT---------------------------------------------CTCTTTCTCTTCCCCAAA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------GCCCGCCCACA---------------------------------CTC-------------------G------G----TGTATGTGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................C--------------TTGGGCCAA-----TCGGAAATT----GT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C--------------TTGGGCCAA-----TCGGAAATT----GT-ATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTGTGCTTTGTAATAAC.....2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-ATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TTAGCTTTTC--------------TTGGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TC--------------TTGGGCCAA-----TCGGAAATT----GT-AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000
...............................TTTTC--------------TTGGGCCAA-----TCGGAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CAGCAAATCAATACTT----GGGCTGCCATTCC.................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
...................................................TGGGCCAA-----TCGGAAATT----GT-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................AGCAAATCAATACTT----GGG...........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTCA---------------GCTTTAGCTTTTC--------------TTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTGTGCTTTGTAATAA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................TGGGCCAA-----TCGGAAATT----GT-ATTTCATT---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CGTTTCG----------TTCC-GTTCGTCAGT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTC--------------TTGGGCCAA-----TCGGAAATT----GT-ATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AATT----GT-ATTTCATT---------------GGTAAGT-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................TC--------------TTGGGCCAA-----TCGGAAATT----GT-ATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CTTTTC--------------TTGGGCCAA-----TCGGAAATT----GT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................ATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................GCTTTTC--------------TTGGGCCAA-----TCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................ATTCGTTGGCGCTCTCT------------------------CTTT.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTTCG----------TTCC-GTTCGTCAGTTT................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-ATTTCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TA....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTCT---------------------------------------------CTCTTTCTCTT................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTTTCG----------TTCC-GTTCGTCAGTG.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCG----------TTCC-GTTCGTCAGTTTTC..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTTC--------------TTGGGCCAA-----TCGGAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------------------------------------AGAGAGCGAAAA-C---------------------------CCCCC-------G........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................TC--------------TTGGGCCAA-----TCGGAAATT----GT-...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-------GCCCGCCCACA---------------------------------CTC-------------------G------G----TGT........................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GCCAA-----TCGGAAATT----GT-ATTTCATT---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CA---------------GCTTTAGCTTTTC--------------TTGGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................AAATCAATACTT----GGGCTGCCAT....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGGCCAA-----TCGGAAATT----GT-AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCGAAAA-C---------------------------CCCCC-------GCCCG....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................ATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................ATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTAGCTTTTC--------------TTGGGCCAA-----TCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GGGCCAA-----TCGGAAATT----GT-ATTTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................C--------------TTGGGCCAA-----TCGGAAATT----GT-ATTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-ATTTCATT---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................GCCAA-----TCGGAAATT----GT-AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TCT------------------------CTTTTCCGTCAGTCTCT---------------------------------------------C..........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................TTGGGCCAA-----TCGGAAATT----GT-AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..TTTTCA---------------GCTTTAGCTTTTC--------------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----AT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTTTTCCCCCACTCTCT---------------------------------------------CTCTTTCTCTCTCCCGAA-----------------------------------------------------------AGAGAGCGAAAAAC---------------------------CCCCC-------GCCCGCCCCCA---------------------------------CTC-------------------G------GTGTATGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................CT-----AGCCCATTCGTTGGCGC......................................................................................................................................................................................................................................................................................................................................1911.0011000000
...................................C--------------TTGGGCCGA-----TCGGAAATT----AT-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
GCTTTTCA---------------GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTT----GGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTTT------------------------CTTTTCCCCCACACTCT---------------------------------------------CTCTTTCTCTCTCCCGAA-----------------------------------------------------------AGAGAGCGAAAAGC---------------------------CCCCC-------GCCCGCCCCCA---------------------------------CTT-------------------G------GTGCATGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGTGCTTTGTAATAACGA...2211.00100000010000
.......A---------------GCTTTAGCTTTTC--------------TTGGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
....................................................GGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CACTCT---------------------------------------------CTCTTTCTCTCTCCC............................................................................................................................................................................................................................2111.00101000000000
......................................................................................TT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................................................................CAAATCAATACTT----GGGCTGCC......................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.....................................................GGCCGA-----TCGGAAATT----GT-ATTTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................GCTTTAGCTTTTC--------------TTGGGCCGA-----TCGGAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000
.........................TTTAGCTTTTC--------------TTGGGCCGA-----TCGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEug1
GCTTTTTA---------------GCCTTAGCTTTTCCTTCACACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------T--------------------------------------------------------------TCTTTCTCTG--CCCAA-------------------------------AG--------------------------AGAGAGC--AAC-C---------------------------CCCCCGCCTG----CCGCCCCCAC-A--------CACT----A-----AAAAC----ACAG-TGTATCTCTGTAAGCGA--G--TG----TGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
droBia1
GCTTTTCG---------------GCCACAGCTTTTC-CTCACACGCCTCTTCGGGCCGA-----TCGGAAATT----GT-GTTTGATTGGATTGGATTGGGTTGGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTGAGGGGCTGCCATTCTGTTTCGT-TCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGCTGGCGCTCTCTC-----------------------CTCCTGC--CTCTGTCT---------C-----------TCC-----------------------GG--CTCTCTCCCGAG-----------------------------------------------------------AGAGCGCC----GC---------------------------CCCGCGCCTGCCGCCCGCCCCCAC-A--------CACCAGATA-----AAC---------------------------G--G--TG----TGTGTGCGTGCTTTGTAACAACGAGTASizeHit CountTotal NormTotal
No Reads
droTak1
GCTTTTCG---------------GCCATAGCTTTTC-TTCACACGCCTCTTTGGGCCGA-----TCGGAAATT----AT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCACCA------TAACCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCGTTTCG-----TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGCTGGCGCTCTCT--------------------------TCTCC-------TGC---------------------------------------------CTCTTGCTC--TCCCGAA-----------------------------------------------------------AGAGAGCC----GC---------------------------CCCCCGCCAGCCGCCCGCCCCCAC-A--------CACCAGATA-----AAC---------------------------G--G--TG----TGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
droEle1
GCAA--CA---------------GCTATAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAGTTACATAT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCATGG--ATGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTC--------------------------------------------------------------------------ATG-----------------------------------------------------------AGAAAACGGA-------------------------------CCCCC-------GCCCGCCCCCAA-A--------CACCACCTA-----AAC---------------------------G-TC--TG----TGTGTGCGTGCTCTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
droRho1
GCAA--CA---------------GCTAAAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGT-----ACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCGTGG--ATGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCTCT------------------------CTC--------------------------------------------------------------TT----------ATG-----------------------------------------------------------AGAAAACGGA-------------------------------CCCCC-------GCCCGCCCCCAA-A--------CACCACCTA-----AAC---------------------------C--GCCTG----TGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
droFic1
GCCATAAC---------------GTTTTAGCTTTTC------ACGCCTCTTTGGGCCGA-----TCGGAAATT----GT-ATTTGATT---------------GGTAAGTAAAGTACAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCA------TGGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCG----------TTCC-GTTCGTTAGTTTTCCT-----AGCCCATTCGTTGGCGCTCAC---------------------------------CCACTCTCT----TTTCCT-----------T--------------------------GCTCTCTTTCCCGAG-----------------------------------------------------------AGAGAGCC----GC---------------------------CCCCC-------GCCCGCCCCCAC-A--------CACCAAATA-----AAC---------------------------------TG----TGTGTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
droKik1
GCGACCAC---------------GTCCCCGCTTTTC--------------TT-GGCCGATCGGATCGGAAAAT----TT-ATTTGATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGTG--------------------------------------------------------------------GC-AGCGCCACCGCCACCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTCCATTCCGCCTGCTCTC-TTTCGTTAGTTTTTCT-----TGCCCATTCGTTGGCGTTGTCT------------------------CTGCTCC--CACTCTCTCCCCTTTCCC-----------TCCCACTCTCTTGTCCGCCAA----------------CTGAG-------------------------------AGAGAGAGCAGAGAGGCGA--CCAGACC--------------ACCGCCCCCGCT------------------------------TCCGCCCGCGGCGGCCCAACGCAAAATA-----AAC------TC--------------------------T----TGTGTGCGTGCTTTGTA---ACGAGTASizeHit CountTotal NormTotal
No Reads
droAna3
GCAGCCAC---ATTACATACA--TATGT--------------ACGCCTTTTTGGCCCGA-----TCGGAAATT----GA-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAG---------------------------------------------------------------------------------------TCAGCAAATCAATACTTTAAGGGGCTGCCATTTCGTTTCGTTTCA-----TTTC-GTTCGTTAGTTTTCCTTCGTTGGGCCATTCGTTGGCGTTGGTG-------------T----------CT------------------------------------------------------------GCGCCTCTCTTTCCAGAGAGAGGAGAGCGCCCGCGAGCGAGAGAGCGAAAGAGAGA-C--------AAAGCTAGA-G--------------AGCGCCCCCGCTACCCTGTCCCTCCAC-CC--ACA----ACCCGA-CCC------ACCCAAGACAAAATAAAATAAAAGTTAACTC-------------------------TG----TGTGCGTGTGCTCTGTAATAACGAGTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................GGCCCGA-----TCGGAAATT----GA-ATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
GCCTTGCCCACA-TACATACATATGTGT--------------ACGCCTTTTTGGCCCGA-----TCGGAAATT----TA-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAG---------------------------------------------------------------------------------------TCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTTCGTTTCGTTTCATTTC-GTTCGTTAGTTTTCCTTCGTTGGCCCATTCGTTGGCGTTGTCT------------------------CTGCTCC--CACTGCTG---------CTGCCAGCCTGCGCC-----------------------GCCTCTCTTT--CGAG-----------------------AGATGGAAAGAGAGAGC--------AAAG--ACA-A--------------AGCG-----------------------CCCCC-------GCTCTCCCCCAA-AAAGCCCAAGACAAAATAAAATAAAAGCCAAC---------------------------TC----TGTGTGCGTGCTCTGTAATAACGAGTASizeHit CountTotal NormTotal
No Reads
dp5
ACTTCTTC---------------GCCTC-------------------------GGCTGA-----TCGGAAATT----TC-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAGAGCGCCTCACCGCTCAGCGCCGCGCCGCTCTGCTCCGCGCAGTCGGACGGATGGGATGGCGAGTCGGGGC-AG--CCA------GCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTT--------------------CGTTAGTTTTTCT-----TTCCCATTCGTTGGCAGTACC--A----------GC----------CC--------CC---------------------------------GCCTTGTCCGCCAGC----------------------------------------------------------------------------AAC--------------ACCGCCCCCGCT------------------------------TCCGCCCA-----G-------CT--ATA-----AAAGC----GCTGCTGTATGTTCGTTAGTGTGTG--TG----TGTGTGTGTGCTCTGTAACAACGAGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...TCTTC---------------GCCTC-------------------------GGCTGA-----TCGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................TCGGACGGATGGGATGGCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
.....................................................................................................................................................................................................................GCGCAGTCGGACGGATGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000010
..............................................................................................................................................................................................................................................................................................................................................................TTGGCAGTACC--A----------GC----------CC--------CC---------------------------------GC..........................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................ATTCGTTGGCAGTACC--A----------GC----------CC--------CC---------------------------------G...........................................................................................................................................................................................................................................................2411.0010100000000
.......C---------------GCCTC-------------------------GGCTGA-----TCGGAAATT----TC-ATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
ACTTCTTC---------------GCC------------------------TCGGTCCGA-----TCGGAAATT----TC-ATTTTATT---------------GGTAAGT-----ATAA----------------------------------------------------GAAGAGAGCGCCTCACCGCTCAGCGCCGCGCCGCTCTGCTCCGCGCAGTCGGACGGATGGGATGGCGAGTCGGGGC-AG--CCA------GCGCCAGCAAATCAATACTTTAAGGGGCTGCCATTCCGTTT--------------------CGTTAGTTTTTCT-----TTCCCATTCGTTGGCAGTACC--A----------GC----------CC--------CC---------------------------------GCCTTGTCCGCCAGC----------------------------------------------------------------------------AAC--------------ACCGCCCCCGCT------------------------------TCCGCCCA-----G-------CT--ATA-----AAAGC----GCTGCTGTGTGTTTGTGAGTGTATG--TG----TGTGTGTGTGCTCTGTAACAACGAGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGTAACAACGAGTA1811.001100000
....CTTC---------------GCC------------------------TCGGTCCGA-----TC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
................................................................................................................................................................................................................................CGGATGGGATGGCGAGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
................................................................................................................................................................................................................................CGGATGGGATGGCGAGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droWil2
GCATTTCA---------------C--TCAGGTC-TCTTGCGTGCGCGTAT-T----GGC-----TCGGAAATT----CTCATTTTATT---------------GGTAAGT-----ATAAATATAGTGAGTGG------AGAG-----------------------------GATGTG--------------------------------------------------------------------GCCAGCGCCA--------GCTAGCAAATCAATACTTTAAGGGGCTGCCATTCTGTTCGCATTCG-------CCGTTTCGTTAGTTTTTCT-----TTTCCATTCGTTGGCATCGTCG-------------C----------AA--------AC---------------------------------GCCTTGTCCGCCACCGTC------------------------------------------------------------------------------------------ACCAC-----------------------CGCC-------GCCC-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................GTGCGCGTAT-T----GGC-----TCGGAAATT----CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..............................................GTAT-T----GGC-----TCGGAAATT----CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................................................................................................TCT-----TTTCCATTCGTTGGCATC.....................................................................................................................................................................................................................................................................................................................................2111.00101000
..............................................GTAT-T----GGC-----TCGGAAATT----CTCATTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........................................................................................................GTAAGT-----ATAAATATAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................................................AAATCAATACTTTAAGGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
droMoj3
TATTGCAA---------------ATC-TAT-------GACCTAAT-----ATTGTTTAT-----TCAGGAATT----AT--TTTTATT---------------GGTAAGT-----AACA---TGGTGAATTCTCTCGTATATTGGGCTAAGCGCTATGGGCGAACCACAGAGCAAGA--------------------------------------------------------------------GC-AAGAAGA------AGAGCAGCAAATCAATATTTTAGGGGGCTGCCATTTCGTTGTT-TGCG-----CTGTGTTTCGCTAGTTTTTCT-----CTTCCATTCGCTGCCGCTGCGCCGCTGTCGCTGTCGTCTACCTTCGCTTTAGCCCCACGC---------------------------------CCT------------GTCAGCCCCCGTGGCACA-----------------------------------------------------------AGAAAA----------------------------------------------------------------------------TA-----AAC-----------------------------------------TCTGCGTGCTTTGTAATAACGAGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................ACGC---------------------------------CCT------------GTCAGCCCCCGTGGCACA-----------------------------------------------------------..............................................................................................................................................................2511.001000010
.............................................................................................................................................................................................................................................................................................................GTT-TGCG-----CTGTGTTTCGCTAG...................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................AGCAAGA--------------------------------------------------------------------GC-AAGAAGA------AGAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
......................................................................................................................................................................................................................................................................................................................................................................GCGCCGCTGTCGCTGTCGTCTACCTT...........................................................................................................................................................................................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................GTCGCTGTCGTCTACCTTCGCTTTA....................................................................................................................................................................................................................................................................................................2511.001100000

Generated: 05/18/2015 at 07:38 PM