ID:

dsi_13395

 Coordinate:

2l:20363773-20363922 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CAACGAAGAAGGGCAAGGAAAACAAGAACAAAAACACCAGATATTGACAGGTAAAAGCAGTCACCCTCCCATTCTCCTTTTTTATCGCTCTCTCCCCAAGAGAATTTCGAATTTAGTTTCACTATCACCTTTTCTATGATTCATTTGTTCTTGTGATAATATATTGCAATTCACGTGGACTAAGGGTTCAATCATGATATGATTGTTTTTTGTGATTCATTGTGATCATAAATTGTATTCAAATTTGTTT
**************************************************............(((((.....................(((((.....))))).....((((((((.................))).)))))....((((.(((((..............))))).))))..))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR902009
testis
 M024
male body		 M023
head
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
 SRR1275487
Male larvae		 SRR553488
RT_0-2 hours eggs
.............................................................................................................................................................................CGGGGACTAAGGGTTCGA........................................................... 18 2 16 7.44 119 118 0 0 0 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................CGTGGAATAAGGGTTCGA........................................................... 18 2 13 4.31 56 56 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACGGGGACTAAGGGTTC............................................................. 18 2 14 1.50 21 20 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ATTCATTGTGATCATAAAT................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................ATCATGATATGATTGTTTTTTGTGATT................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........AAGGGCAAGGAAAACAAGAACAAAAAC....................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......................CAAGAACAAAAACACCAGATATTGACAC........................................................................................................................................................................................................ 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGGGGAATAAGGGTTCATTC......................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................ATATTGACCTGTAAAAGCAGT............................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGTGGACTAAGGGTTCGA........................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGATTGTTTTTTGTGATTCATT............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGGGGAATAAGGGTTCA............................................................ 18 2 14 0.86 12 11 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................ACGGGGAATAAGGGTTCAA........................................................... 19 2 13 0.77 10 10 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CACGGGGAATAAGGGTTC............................................................. 18 2 15 0.73 11 11 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGTGGAATAAGGGTTCG............................................................ 18 2 15 0.60 9 8 0 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................CGGGGAATAAGGGTTCAA........................................................... 18 2 14 0.57 8 8 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGGGGACTAAGGGTTCTA........................................................... 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GATTCTTTTGTTCTTCTGAT............................................................................................. 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGTGGAATAAGGGTTCGAT.......................................................... 19 2 13 0.46 6 6 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGGGGACTAAGGGTTCGA........................................................... 19 2 14 0.36 5 5 0 0 0 0 0 0 0 0 0 0 0 0
...............AGGAAAACAAGAAGACAAAGACC.................................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TACGGGGACTAAGGGTTC............................................................. 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACGTGGAATAAGGGTTC............................................................. 18 2 13 0.31 4 1 0 0 0 0 2 1 0 0 0 0 0 0
............................................................................................................................................................................ACGTGGAATAAGGGTTCGA........................................................... 19 2 13 0.31 4 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TTCTTTTGTTCTTCTGATTATAT........................................................................................ 23 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGGGGACTAAGGGTTCGAT.......................................................... 19 2 14 0.14 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGGGGAATAAGGGTTCA............................................................ 17 2 20 0.10 2 0 0 0 0 0 0 0 0 2 0 0 0 0
CAAGGAAGAACGGCGAGGAA...................................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................ACGTGGAATAAGGGTTCGAT.......................................................... 20 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGTCACGTGGTCTAATGGT............................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................TAACGTGGAATAAGGGTTC............................................................. 19 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGGGGAATAAGGGTTCATT.......................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................ACGGGGACTAAGGGTTCG............................................................ 18 2 15 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AACGGGGACTAAGGGTTCTA........................................................... 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...CGACGAAGGGCAAGGACA..................................................................................................................................................................................................................................... 18 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 0 1
............................................................................................................................................................................ACGGGGAATAAGGGTTCAT........................................................... 19 3 18 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................ACTATCGCCTTTTCTAGGT............................................................................................................... 19 3 18 0.06 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CGGACTTAGGCTTCAATC......................................................... 18 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................GACGGGGACTAAGGGTTA............................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CTCGGGGAATAAGGGTTC............................................................. 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CGCGGAATAAGGGTTC............................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

GTTGCTTCTTCCCGTTCCTTTTGTTCTTGTTTTTGTGGTCTATAACTGTCCATTTTCGTCAGTGGGAGGGTAAGAGGAAAAAATAGCGAGAGAGGGGTTCTCTTAAAGCTTAAATCAAAGTGATAGTGGAAAAGATACTAAGTAAACAAGAACACTATTATATAACGTTAAGTGCACCTGATTCCCAAGTTAGTACTATACTAACAAAAAACACTAAGTAACACTAGTATTTAACATAAGTTTAAACAAA
**************************************************............(((((.....................(((((.....))))).....((((((((.................))).)))))....((((.(((((..............))))).))))..))))).............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
........................................................................................................................................................CTCTATTATAGAACGTTAAGTGCT.......................................................................... 24 3 1 1.00 1 0 1 0 0 0 0
..................................................................................ATAGCCAGAGAGCGGTT....................................................................................................................................................... 17 2 9 0.67 6 5 0 0 1 0 0
..................................................................................ATAGCCAGAGAGGGGCT....................................................................................................................................................... 17 2 8 0.50 4 4 0 0 0 0 0
..........................................................................................................................................TAGGTAAACAAGAAC................................................................................................. 15 1 20 0.35 7 0 0 7 0 0 0
....................................................................................................................AGAGTGATAGTTGAAAAG.................................................................................................................... 18 2 5 0.20 1 0 0 0 0 1 0
..........................................................................................................................................TAGGTAAACAAGAACA................................................................................................ 16 1 6 0.17 1 0 0 1 0 0 0
........................................................................................................AAAGCTTAAATCAAA................................................................................................................................... 15 0 10 0.10 1 0 0 1 0 0 0
..............TTCCTTTGGCTCTTGTCTTTGT...................................................................................................................................................................................................................... 22 3 11 0.09 1 0 0 0 1 0 0
...................................................................................................................................................TAGAACACTATTATACAA..................................................................................... 18 2 12 0.08 1 0 0 0 1 0 0
..................................................................................ATAGCCAGAGAGCGGTTAT..................................................................................................................................................... 19 3 18 0.06 1 0 0 0 1 0 0
........................................................TGTCAATGGGAGAGTAAGA............................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 1
........................................................CGTCAGTTCGAGGGTAA................................................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:20363723-20363972 - dsi_13395 CAACGAAGAA-GGGCAAGGAA---AACAAGAACAA---AAACAC-CAGAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCCC--------ATTCTC---------------CTTTTTTATCG----CT--CTCTCCCCAAGAGAATTTCGAA-TTTAGTTTCACT-----------------------------------------------------ATCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTG---TGAT----AATAT-ATTGCAATTCACGTGGAC-TAAGGGTTCAATCAT-----GATATGATTGTTTTTTGTGATTCATTGT---GATCATAAATTGTATTC-AAATTTGT-----TT
droSec2 scaffold_18:850484-850733 - CAACGAAGAA-GGGCAAAGAA---AACAAGAACAA---AAACAC-CAGAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCCC--------ATTCTC---------------CTTTTTTATCG----CT--CTCTCCGCAAGAGAATTTCGAA-TTTAGTTGCACT-----------------------------------------------------ATCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTG---TAAT----AATAT-ATTGCAATTCACGTGGAC-TAAGGGTTCAATCAT-----GATATGATTGTTTTTTGTGATTCATTGT---GATCATAAATTGTATTC-AAATTTGT-----TT
dm3 chr2L:20916705-20916954 - CAACGAAGAA-GGGCAAGGAA---AACAAGAACAA---AAACAT-CAGAT-------ATTGACAGGTAATA-GCAGT----CA------------------------CT-------------CTCCC--------AT-CCC---------------TTTTTTTATCG----CT--CTCTACCCAAGAGAATTTCGAA-TTTAGTTGCACT-----------------------------------------------------ATCA--CCATTTCTATGATTCATTTG----------------------TT-ATTT---TGAT----AATAA-ATTGCAATTCACGTGGACTAAAGGGTTCAATCAT-----GATATGATTGTTCTTTGTGATTCATTGT---GATCATACATTTTATTC-AAATTTGT-----TT
droEre2 scaffold_4845:3549940-3550188 + CAACGAAGAAAGG------AA---AAACAGAACAA---AAACTC-CAGAT-------ATTGACAGGTAACA-GCAGT----CA------------------------CC-------------CTCTC--------TT-CTCTCTTCT---------ATTTTTTAGCG----CT--CTCTCCCCAGCAGAATTTCGAA-TGAAGTTGCACT-----------------------------------------------------ATCA--CCTGTTCTATGATTCATTTA----------------------TT-CTTT---TGAT----AATAT-ATTGAAATTTACGCGGAC-TAAGGTTTCCATCAT-----AAAATTATTGTTTTTTGTGATTCATTGC---GATCATACGTTTTATTC-AAATTTGT------T
droYak3 2R:1834070-1834314 + TAACGAAGACAGGGCAAGGAA---AGCAAGTACTA---AAACACCCATAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCTC--------CT--------CC---------ATTTTTTATCG----CT--CTCTCCCCAGCAAAATTTTGAAATTTATTCGCACT-----------------------------------------------------GTCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTT---TGAT----AATAT-ATTGCATTTCACGTAGAC-TTTGGTTTCAATCAT-----AAAAT---TTTTTTTTGTGATTCATTGT---GA---TAAGTTTTATTT-AAATTTGT-----TT
droEug1 scf7180000409767:387145-387399 + CAACGAAGGGAGGGCAATAAA---AACAAGAACTA---CAACAG-CAGAA-------ATTGACAGGTAAAA-ACATT----CT------------------------CT-------------CACTC--------TC--CCTCTTCCAT--TTGATTCTATCTATCT----CT--CTTTCCCTATAGGAATCTCAAA-TTTTATTTTCT---------------------------------------------------------T--TTTTCCGTATGATTCACTTC--------------------------TTC---TGAT----AACATTTAAGCAATTCATGA-ACC-TAAAGTCTCAATCAT-----AAAATGAGTACTTTGTGTGATTCATTGT---GATCATAAATTTTATTC-TAATTTTT-----AT
droBia1 scf7180000302422:7180508-7180737 + CAACGAAGGAAGGCCACG-GA---AGGAAAAACGA----AGCAG-CAGAA-------ATTGACAGGTAAAA-CT--T-------------------------------------------------------------CT----------------CTTTCTTATCA----CC--CTCTC--TATGGGAATTTCAAG-TATTA--CCTTT------------------TTCTCTCGAT-------------------------ATCC--TCTTCCCCATGATTCATTTA----------------------TT--TTC---TGAT----AACAT---------TCCTGCGGTC-TAAGGTTTCAATCAT-----AGAATTGGTTTTATGTATGATTCACTGT---GCTCGTAAATTTTATTC-AAATTGT------TC
droTak1 scf7180000415708:556736-557002 + CAACGAAGGAA-GGCAAGGAA---AAGAAGAACAA---CAACGT-CAGAA-------ATTCACAGGTAAATTAAATT----AT------------------------CT-------------CTCTT--------TT--------CCAC-------TTTTTGTGTCTCTCACTCCTTCTCTCCGAAAGAATTTCCAA-TGTTA---CTTT------------------TTCAATCGGT----------------------GTATTCT--TTTTCTCCATGAGTCATTTA----------------------TT--TTT---TGAT----AACAT-TTTGCAATTCATGTGGAC-TAAAGTTTCAATCAT-----AAAATGAGTAGTTGGTATGATTCATTGT---GATCATAAATTTTATTC-TAATTTTTC----TT
droEle1 scf7180000491186:937159-937391 - CAACGAAGGAAAGGCAAA-AA---AACAA----AA---CAACAG-CAGAA-------TTCGACAGGTACAAAATATT----AT------------------------AT-------------CT----------------C---------------ACTTTTTATCT----CT--GTTTC--GAAAGGAATTTGTCA-TGGGGTTTCT------------------------------------------------------TCTAT----TTTTCT-----TTATATA----------------------TT--TGT---CGATCATT--TTT-TTTGCAAATCATGGGGAC-TAAAGTTTCAAGCTG-----AAAATGAGTATTATGAGTGATTCATTGAATTAA-ATTAAATTTTATTC-AAATTTTTC----TT
droRho1 scf7180000777264:25742-26002 + CAACGAAGGA-CGGCAGGAAA---AACAAGAACCA---CATTAG-CAGAA-------ATCGACAGGTAAATAACATTGTATCA------------------------CT-------------CTCT--------------C---------------CTTTTTTATCT----CT--CTCTTTTTCTTAATACTTTAAA-TGTTG--GCATA------------------AGCTT----T----------------------CTACTCT--TTTTCTCTATGATTCACATATGTATAAA--------------TT-TTTC---TTAA----AACTT-TTTGCAATTCATGACGAC-TAAAGTTTCAATCAT-----ATAATGAA---ATTGTATGATTCATTGT---GACCATATATTTTATTC-TAATTTTT-----CT
droFic1 scf7180000453842:407933-408156 - CAACGAAGGAAGGGCACGGAA---ACCGACAAC---------AT-AAAGA-------ATTGACAGGTAAAA-ACGTT----CT------------------------CT-------------CTCT--------------G---------------GTTTTTTATCT--CCCT--CTCTC--TTTAAGAATATTTTG-TTGAGTTTT-----------------------------------------------------TT-ATGATTTTTTTTCCATGAGTCACTTA----------------------TT-T------TTAT----AACACTTCTA---------------TAATGTTTTAATCAT-----AAAATACTAATTTTGAATGATTCATTCT---AATCATAA-CAGCATTC-TAATTTTTC----TT
droKik1 scf7180000302412:302727-303000 + CAACGAAGGAAGTGCTTG-AAAAAAACAAGAACGA----AACAA-CTGAAACTAA--ATTGACAGGTAAGAAGAAAA----CA------------------------CC-------------CTCCTCTCTCTC-TA--------CC---------TCCTTTTATCT----CT------------TGGTGTCCC----TTTGGTTGCACTTTTTCGTGTGTTATCTTTGC---------------------------------CTCA--TTTTTTCTATGATTCATTCT----------------------TTTTTTCTATTGAT----AACTT-TTCGCAATTCACGACGAC-TAAAGGTTCGATCGA-----ATGATGAATACTTTCCATGATTCATTCT---GACTATAAATTGTATTC-AAATTCTT-----TT
droAna3 scaffold_12943:3818459-3818758 + CAACGAAAGAAGGGCAAG-AAAAGAATAAAAACAACAATAACAA-CAGAACACAACCCTTTACAGGTAAGA-GAGG-----CACTCGAATTGTATTTCTTCTTCTTGCCAAATTCTTTTCTTTTCTCCTCCCCCCAC-C-------CACTCTTGA---------------------------CCAGAAATATCCATA-TCTCTCTTTTTT--------------------------GTCTCCTTTTTTTCTCTTAGTGTTCT-ATGA------TTCTGTGATTCACTT---------------------------CTC---CGAT----AAGTT-CCTGCAACTCACGGGTAG-TA---GCCCGA------------------TTTCTGCATGATTCACAGT---GATTGTAAATTTTATTT-GAATATTTTATTTAT
droBip1 scf7180000395973:39552-39752 + CAACAAAAGAAGGGCAGA-AA---TAGGAAAAAAA--------A-TAGAC------CCCTGTCAGGTAAGT-GTTCT----TG------------------------CC-------------CCCCC--------ACCC-------CACTATTGG---------------------------CCAGAAATATCCATA-T--AGTGGT-----------------------------------------------------CT-AGGA------TCCTCTGATTCA------------------------------TTC---TGAT----AACTT-TGTGGAACTCACGGGTA---ATAGTCCCAA------------------GTTTTGCATGAATCACAAT---GATTGTAAATTTTATTT----TCTAT-----TT
dp5 4_group3:7353490-7353649 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--CTTCTTCCATGATTCACTTGTTCATCGATGTTAACCCAACCAT-TTCTTTGATAAT-AAT--TTT-TGTGCCAATCATT-GGGT-TAAAGGTTCAAACATTTAAAAGGATGAATAATTTAAATGAATCACAGTTCTAAACATAA-TTTTGTTTTAAACCAAAT----TC
droPer2 scaffold_1:8799954-8800113 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--CTTCTTCCATGATTCACTTGTTCATCGATGTTAACCCAACCAT-TTCTTTGATAAT-AAT--TTT-TGTGCCAATCATT-GGGT-TAAAGGTTGAAACATTTAAAAGGATGAATAATTTAAATGAATCACAGTTCTAAACATAA-TTTTGTTTTAAACCAAAT----TC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAACGAAGAA-GGGCAAGGAA---AACAAGAACAA---AAACAC-CAGAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCCC--------ATTCTC---------------CTTTTTTATCG----CT--CTCTCCCCAAGAGAATTTCGAA-TTTAGTTTCACT-----------------------------------------------------ATCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTG---TGAT----AATAT-ATTGCAATTCACGTGGAC-TAAGGGTTCAATCAT-----GATATGATTGTTTTTTGTGATTCATTGT---GATCATAAATTGTATTC-AAATTTGT-----TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTCATTGT---GATCATAAAT.......................1911.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATCAT-----GATATGATTGTTTTTTGTGATT..........................................2711.00100100000000000000
........AA-GGGCAAGGAA---AACAAGAACAA---AAAC............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..........................CAAGAACAA---AAACAC-CAGAT-------ATTGACAC.....................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TGATTGTTTTTTGTGATTCATT......................................2211.00100010000000000000
droSec2
CAACGAAGAA-GGGCAAAGAA---AACAAGAACAA---AAACAC-CAGAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCCC--------ATTCTC---------------CTTTTTTATCG----CT--CTCTCCGCAAGAGAATTTCGAA-TTTAGTTGCACT-----------------------------------------------------ATCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTG---TAAT----AATAT-ATTGCAATTCACGTGGAC-TAAGGGTTCAATCAT-----GATATGATTGTTTTTTGTGATTCATTGT---GATCATAAATTGTATTC-AAATTTGT-----TTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CAAGAACAA---AAACAC-CAGG.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
..........................CAAGAACAA---AAACAC-CAGGG-------C............................................................................................................................................................................................................................................................................................................................................................................................21180.67128202
...........................AAGAACAA---AAACAC-CAGG.....................................................................................................................................................................................................................................................................................................................................................................................................1820.5011000
dm3
CAACGAAGAA-GGGCAAGGAA---AACAAGAACAA---AAACAT-CAGAT-------ATTGACAGGTAATA-GCAGT----CA------------------------CT-------------CTCCC--------AT-CCC---------------TTTTTTTATCG----CT--CTCTACCCAAGAGAATTTCGAA-TTTAGTTGCACT-----------------------------------------------------ATCA--CCATTTCTATGATTCATTTG----------------------TT-ATTT---TGAT----AATAA-ATTGCAATTCACGTGGACTAAAGGGTTCAATCAT-----GATATGATTGTTCTTTGTGATTCATTGT---GATCATACATTTTATTC-AAATTTGT-----TTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................AGAACAA---AAACAT-CAGAT-------ATTGACA......................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACGAAGAA-GGGCAAGGAA---AACAAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGAACAA---AAACAT-CAGAT-------ATTGACA......................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACGAAGAA-GGGCAAGGAA---AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGGCAAGGAA---AACAAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AATTCACGTGGACTAAAGGGT.............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000001000
..............................AACAA---AAACAT-CAGAT-------ATTGACAG.....................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------A............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------AT...........................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AA---AACAAGAACAA---AAACAT-C........................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGAACAA---AAACAT-CAGAT-------ATT..........................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAA-GGGCAAGGAA---AACAAGAACA....................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------.............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAA---AACAAGAACAA---AAACAT-CAGAT-------A............................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GAT-------ATTGACAGGTAATA-GCAGT----CA------------------------CT-------------............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.........A-GGGCAAGGAA---AACAAGAACAA---................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGAACAA---AAACAT-CAGAT-------ATTGA........................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTGACAGA....................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................A-ATTGCAATTCACGTGGAC.....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AA---AACAAGAACAA---AAACAT-CAGA.....................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TCTATGATTCATTTG----------------------TT-ATTT---TGAT----AA...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAAGAA-GGGCAAGGAA---AA............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TCAT-----GATATGATTGTTCTTTGTGAT...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ACGAAGAA-GGGCAAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTGACA......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAGGAA---AACAAGAACAA---AA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAA-GGGCAAGGAA---AACAAGAACAA---AAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGAACAA---AAACAT-CAGAT-------ATT..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................ATCG----CT--CTCTACCCAAGA...........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAA-GGGCAAGGAA---AACAAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AACAAGAACAA---AAACAT-CAGAT-------ATTGACA......................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ATTTCGAA-TTTAGTTGCACT-----------------------------------------------------...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................T-CAGAT-------ATTGACAGGTAATA-GCAGT----CA------------------------C..........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAACAA---AAACAT-CAGAT-------ATTGA........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAACGAAGAA-GGGCAAGGAA---AA............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...CGAAGAA-GGGCAAGGAA---AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TAGTTGCACT-----------------------------------------------------ATCA--CCATTTCTATGA.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTGACAG.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTGAC.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAGGAA---AACAAGAACAA---AAACA...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGGAA---AACAAGAACAA---AAAC............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGAACAA---AAACAT-CAGAT-------ATTGACAA.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTG.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TAAAGGGTTCAATCAT-----GATATGATTG......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGAAGAA-GGGCAAGGAA---AACAAGAACA....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAAGAACAA---AAACAT-CAGA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AAGAA-GGGCAAGGAA---AACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.AACGAAGAA-GGGCAAGGAA---AA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..ACGAAGAA-GGGCAAGGAA---AACAAGAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................CAAGAACAA---AAACAT-CAGAT-------ATTGA........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAACGAAGAAAGG------AA---AAACAGAACAA---AAACTC-CAGAT-------ATTGACAGGTAACA-GCAGT----CA------------------------CC-------------CTCTC--------TT-CTCTCTTCT---------ATTTTTTAGCG----CT--CTCTCCCCAGCAGAATTTCGAA-TGAAGTTGCACT-----------------------------------------------------ATCA--CCTGTTCTATGATTCATTTA----------------------TT-CTTT---TGAT----AATAT-ATTGAAATTTACGCGGAC-TAAGGTTTCCATCAT-----AAAATTATTGTTTTTTGTGATTCATTGC---GATCATACGTTTTATTC-AAATTTGT------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................AGCG----CT--CTCTCCCCAGCAGAATTT.....................................................................................................................................................................................................................................................2411.0010100000
.AACGAAGAAAGG------AA---AAACAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.AACGAAGAAAGG------AA---AAACAGAACAA---AA..............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..................................................................................................................................................................................................................................................................................................................................................GAAATTTACGCGGAC-TAAGGT..............................................................................2111.0010100000
droYak3
TAACGAAGACAGGGCAAGGAA---AGCAAGTACTA---AAACACCCATAT-------ATTGACAGGTAAAA-GCAGT----CA------------------------CC-------------CTCTC--------CT--------CC---------ATTTTTTATCG----CT--CTCTCCCCAGCAAAATTTTGAAATTTATTCGCACT-----------------------------------------------------GTCA--CCTTTTCTATGATTCATTTG----------------------TT-CTTT---TGAT----AATAT-ATTGCATTTCACGTAGAC-TTTGGTTTCAATCAT-----AAAAT---TTTTTTTTGTGATTCATTGT---GA---TAAGTTTTATTT-AAATTTGT-----TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GACAGGGCAAGGAA---AGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................AT---TTTTTTTTGTGATTCATTGT---.................................2211.00100000010000
...................................................................................................................................................................................................................................................................................CTATGATTCATTTG----------------------TT-CTTT---TGAT----AAT..........................................................................................................2711.00100100000000
.......GACAGGGCAAGGAA---AGCAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
CAACGAAGGGAGGGCAATAAA---AACAAGAACTA---CAACAG-CAGAA-------ATTGACAGGTAAAA-ACATT----CT------------------------CT-------------CACTC--------TC--CCTCTTCCAT--TTGATTCTATCTATCT----CT--CTTTCCCTATAGGAATCTCAAA-TTTTATTTTCT---------------------------------------------------------T--TTTTCCGTATGATTCACTTC--------------------------TTC---TGAT----AACATTTAAGCAATTCATGA-ACC-TAAAGTCTCAATCAT-----AAAATGAGTACTTTGTGTGATTCATTGT---GATCATAAATTTTATTC-TAATTTTT-----ATSizeHit CountTotal NormTotal
No Reads
droBia1
CAACGAAGGAAGGCCACG-GA---AGGAAAAACGA----AGCAG-CAGAA-------ATTGACAGGTAAAA-CT--T-------------------------------------------------------------CT----------------CTTTCTTATCA----CC--CTCTC--TATGGGAATTTCAAG-TATTA--CCTTT------------------TTCTCTCGAT-------------------------ATCC--TCTTCCCCATGATTCATTTA----------------------TT--TTC---TGAT----AACAT---------TCCTGCGGTC-TAAGGTTTCAATCAT-----AGAATTGGTTTTATGTATGATTCACTGT---GCTCGTAAATTTTATTC-AAATTGT------TCSizeHit CountTotal NormTotal
No Reads
droTak1
CAACGAAGGAA-GGCAAGGAA---AAGAAGAACAA---CAACGT-CAGAA-------ATTCACAGGTAAATTAAATT----AT------------------------CT-------------CTCTT--------TT--------CCAC-------TTTTTGTGTCTCTCACTCCTTCTCTCCGAAAGAATTTCCAA-TGTTA---CTTT------------------TTCAATCGGT----------------------GTATTCT--TTTTCTCCATGAGTCATTTA----------------------TT--TTT---TGAT----AACAT-TTTGCAATTCATGTGGAC-TAAAGTTTCAATCAT-----AAAATGAGTAGTTGGTATGATTCATTGT---GATCATAAATTTTATTC-TAATTTTTC----TTSizeHit CountTotal NormTotal
No Reads
droEle1
CAACGAAGGAAAGGCAAA-AA---AACAA----AA---CAACAG-CAGAA-------TTCGACAGGTACAAAATATT----AT------------------------AT-------------CT----------------C---------------ACTTTTTATCT----CT--GTTTC--GAAAGGAATTTGTCA-TGGGGTTTCT------------------------------------------------------TCTAT----TTTTCT-----TTATATA----------------------TT--TGT---CGATCATT--TTT-TTTGCAAATCATGGGGAC-TAAAGTTTCAAGCTG-----AAAATGAGTATTATGAGTGATTCATTGAATTAA-ATTAAATTTTATTC-AAATTTTTC----TTSizeHit CountTotal NormTotal
No Reads
droRho1
CAACGAAGGA-CGGCAGGAAA---AACAAGAACCA---CATTAG-CAGAA-------ATCGACAGGTAAATAACATTGTATCA------------------------CT-------------CTCT--------------C---------------CTTTTTTATCT----CT--CTCTTTTTCTTAATACTTTAAA-TGTTG--GCATA------------------AGCTT----T----------------------CTACTCT--TTTTCTCTATGATTCACATATGTATAAA--------------TT-TTTC---TTAA----AACTT-TTTGCAATTCATGACGAC-TAAAGTTTCAATCAT-----ATAATGAA---ATTGTATGATTCATTGT---GACCATATATTTTATTC-TAATTTTT-----CTSizeHit CountTotal NormTotal
No Reads
droFic1
CAACGAAGGAAGGGCACGGAA---ACCGACAAC---------AT-AAAGA-------ATTGACAGGTAAAA-ACGTT----CT------------------------CT-------------CTCT--------------G---------------GTTTTTTATCT--CCCT--CTCTC--TTTAAGAATATTTTG-TTGAGTTTT-----------------------------------------------------TT-ATGATTTTTTTTCCATGAGTCACTTA----------------------TT-T------TTAT----AACACTTCTA---------------TAATGTTTTAATCAT-----AAAATACTAATTTTGAATGATTCATTCT---AATCATAA-CAGCATTC-TAATTTTTC----TTSizeHit CountTotal NormTotal
No Reads
droKik1
CAACGAAGGAAGTGCTTG-AAAAAAACAAGAACGA----AACAA-CTGAAACTAA--ATTGACAGGTAAGAAGAAAA----CA------------------------CC-------------CTCCTCTCTCTC-TA--------CC---------TCCTTTTATCT----CT------------TGGTGTCCC----TTTGGTTGCACTTTTTCGTGTGTTATCTTTGC---------------------------------CTCA--TTTTTTCTATGATTCATTCT----------------------TTTTTTCTATTGAT----AACTT-TTCGCAATTCACGACGAC-TAAAGGTTCGATCGA-----ATGATGAATACTTTCCATGATTCATTCT---GACTATAAATTGTATTC-AAATTCTT-----TTSizeHit CountTotal NormTotal
No Reads
droAna3
CAACGAAAGAAGGGCAAG-AAAAGAATAAAAACAACAATAACAA-CAGAACACAACCCTTTACAGGTAAGA-GAGG-----CACTCGAATTGTATTTCTTCTTCTTGCCAAATTCTTTTCTTTTCTCCTCCCCCCAC-C-------CACTCTTGA---------------------------CCAGAAATATCCATA-TCTCTCTTTTTT--------------------------GTCTCCTTTTTTTCTCTTAGTGTTCT-ATGA------TTCTGTGATTCACTT---------------------------CTC---CGAT----AAGTT-CCTGCAACTCACGGGTAG-TA---GCCCGA------------------TTTCTGCATGATTCACAGT---GATTGTAAATTTTATTT-GAATATTTTATTTATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
CAACGAAAGAAGGGCAAG-AAAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................ATAACAA-CAGAACACAACCCT...........................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................AATAACAA-CAGAACACAACC.............................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droBip1
CAACAAAAGAAGGGCAGA-AA---TAGGAAAAAAA--------A-TAGAC------CCCTGTCAGGTAAGT-GTTCT----TG------------------------CC-------------CCCCC--------ACCC-------CACTATTGG---------------------------CCAGAAATATCCATA-T--AGTGGT-----------------------------------------------------CT-AGGA------TCCTCTGATTCA------------------------------TTC---TGAT----AACTT-TGTGGAACTCACGGGTA---ATAGTCCCAA------------------GTTTTGCATGAATCACAAT---GATTGTAAATTTTATTT----TCTAT-----TTSizeHit CountTotal NormTotal
No Reads
dp5
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--CTTCTTCCATGATTCACTTGTTCATCGATGTTAACCCAACCAT-TTCTTTGATAAT-AAT--TTT-TGTGCCAATCATT-GGGT-TAAAGGTTCAAACATTTAAAAGGATGAATAATTTAAATGAATCACAGTTCTAAACATAA-TTTTGTTTTAAACCAAAT----TCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--CTTCTTCCATGATTCACTTGTTCATCGATGTTAACCCAACCAT-TTCTTTGATAAT-AAT--TTT-TGTGCCAATCATT-GGGT-TAAAGGTTGAAACATTTAAAAGGATGAATAATTTAAATGAATCACAGTTCTAAACATAA-TTTTGTTTTAAACCAAAT----TCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads

Generated: 05/19/2015 at 11:50 AM