ID:

dsi_13309

 Coordinate:

2r:18108740-18108889 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.8 -9.6 -9.5 -9.3

Flybase annnotation

CDS [2r_18108877_18109503_+]; five_prime_UTR [2r_18108750_18108876_+]; exon [2r_18108750_18109617_+]

No Repeatable elements found

Sense Strand Reads

------------------------------------------------------------##############################################################################################################################################################################################
TTTCATTATCGAGCTCATCACTAATTCTGTGCTTTGCTTGTGAACTTTTGTGTTGTGAAATAGCAGAGTATTTCGATACCTTACAAAACAATCCATCTATTTAACGAGTGGTTTTTGACCAACACAACTCAGTATTGGCATATAAACATTAAAGGGGAGACATTACAAAATTCTAAAAATTATAACCATGGAAGCTGAAGCTCATGAATGTAGAGCACCTGTATCTGCAAACATAAGTGATTCATCAGCG
*************************************************************************.......((.........(((((((........((((.....((.((((.((......)).))))))......)))).......)))............................))))....))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 O002
Head
 M023
head
 M053
female body
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
......................AATTCTGTGCTTTGCTTGTGAAC............................................................................................................................................................................................................. 23 0 1 3.00 3 0 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCATGGAGGTAGAGCACC............................... 18 2 7 2.43 17 12 0 0 5 0 0 0 0 0
.........................................................................CGATACCTTACAAAACAA............................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................CTCATGAATGTAGAGCACCTG............................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..................................................TGTTGTGAAATAGCAGAGTATTTCAA.............................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................TAACCATGGAAGCTGAAGCA................................................ 20 1 1 1.00 1 0 0 0 1 0 0 0 0 0
.................................................GTGTTGTGAAATAGCAGAGTATTTCG............................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................AACAATCCATCTATTTAACGAGTGGTT......................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................GAGCACCTGTATCTGCAAAC.................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................TAAAAATTATAACCATGGAAGCTGA.................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................ATCTATTTAACGAGTGGTTTTTGAC................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................AGCTGAAGCTCATGAATG........................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................CTGTGCTTTGCTTGTGAACTT........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................TGGAAGCAGAAGCTCAAGAA.......................................... 20 2 1 1.00 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................TCATGAATGTAGAGCACCTGTAA.......................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................ATCTGCAAACATAAGTGATTCATCAGC. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TTAAAGGGGAGACATTACAAAATTC............................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................GATCATGGAGGTAGAGCACC............................... 20 3 9 0.67 6 5 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................GATCATGAAGGTAGAGCA................................. 18 2 5 0.20 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................TCATGGATGTAGAGCACT............................... 18 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.TTCAATATCGAGATCATC....................................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................GCTGACGCGCATGAATG........................................ 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

AAAGTAATAGCTCGAGTAGTGATTAAGACACGAAACGAACACTTGAAAACACAACACTTTATCGTCTCATAAAGCTATGGAATGTTTTGTTAGGTAGATAAATTGCTCACCAAAAACTGGTTGTGTTGAGTCATAACCGTATATTTGTAATTTCCCCTCTGTAATGTTTTAAGATTTTTAATATTGGTACCTTCGACTTCGAGTACTTACATCTCGTGGACATAGACGTTTGTATTCACTAAGTAGTCGC
****************************************************.......((.........(((((((........((((.....((.((((.((......)).))))))......)))).......)))............................))))....))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
..........................................................................CTATGGAATGTTTTGTTAGGT........................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0
......................................................................................TTGTTAGGTAGATAAATTGC................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0
..........................................................TTATCGTCTCATAAAGCTATGG.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................CGACTTCGAGTACTTACA....................................... 18 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................CCCCTCTGTAATGTTTTAAGAT........................................................................... 22 0 1 1.00 1 1 0 0 0 0
................................................................................................................AAAAGTTGTTTTGTTGAGTCAT.................................................................................................................... 22 3 8 0.25 2 0 0 0 2 0
.........................................................................................................................TGTGTTAAGACATAACCG............................................................................................................... 18 2 6 0.17 1 0 0 0 0 1
...........................................................................................................................................................................................TACCTGCGCCTTCGAG............................................... 16 2 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:18108690-18108939 + dsi_13309 TTTCAT--------TATCG------------AGCTCATCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTG-----TTGTGAAATAGCAGA-------GT--ATTTCGATACCTTACAAAACAATCCATCT----ATTTAACGA-GTGGTTTTTGA-CCA--ACACAACTCAGTATTGGC--------------------ATATAAACATTAA--AGGGG--AGA-CA-------TTACAAAA----TTCTA-------AAAATTATAACCATGGAAGCTGAAGCTCATGAAT-------GTAGAG-------CACCT--GTATCTGCAAA------CAT-AAGTGATTCATC---AGCG
droSec2 scaffold_9:879977-880226 + TTTCAT--------TATCG------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTG-----TTGTGAAATAGCAGA-------GT--ATTTCGATACTTTACAAAACAATTCATCT----ATTTAACGG-GTGGTTTTTGA-CCA--ACGCAACTCAGTATTGGC--------------------ATATAAACATTAA--AGGGG--AGA-CA-------TTACAAAA----TTCTA-------AAATTTATAACCATGGAAGCTGAAGCTCAAGAAT-------GTAGTG-------CACCT--GTATCTGTAAA------CAA-AAGTGATTCATC---AGCG
dm3 chr2R:17554192-17554439 + TTTCAT--------TATCA------------AGCTCACCACTAATAT---------------TGTGC--TTTGCTTGTGAACTTTTATG-----TTGTGAAATAGCTGA-------GT--ATTTCGAATCTTTACAAAACAATCCATCT----ATTTAACTA-GTGGCCTCTGA-CCA--ACACAACTCAGTATTAGC--------------------ATAA--ACATTAA--AAGGG--ACA-CA-------TTACAAAA----TTCTA-------AAAATTATAACCATGGAATCTGAAGCTCAAGAAC-------GTACTG-------CACCT--GTATCTGCAAA------CAA-AAGTGATTCATC---AGCG
droEre2 scaffold_4845:11702449-11702703 + CTCAATATA-----AATCA------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGAGAACTTTTGTG-----TTGTGAAATACCAAT-------GT--ATTTCGATACTCTACTAAACAACGCATCTAAATATTTAACGA-GTGGCTTATGG-CCA--TCACAATTCAGTATTGGC--------------------ATAG--CCATTAA--AAGGG--AGA-CC-------TTAAAGAA----TTCAC-------AATATTATAACCATGGAAGCTGAAGCTCACGAAA-------GTAGTG-------CATCC--GTGTCTGCAAG------CAA-AAATAATTCTGC---GGAG
droYak3 2R:11617004-11617251 - AATTCT--------AACCA------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTA-----TTGTGAAATACAAAT-------GT--ATTTCGATACTTTACAAAACCATTCACAT----ATTTAAAGA-GTGGCTTTTGG-CCA--TCACAATTCAGTATTGGC--------------------ATAG--ACTTCAA--AAGGA--AGA-CC-------TTACGAAA----CTCAC-------AAAATTATAACCATGGAAGCAGAAGCTCACGAAA-------GTAGTC-------CATCC--TTATCTGCAAA------TAC-AAGTGATTCATC---AAAG
droEug1 scf7180000409672:7369429-7369657 + TTACCTGTAAAGATAAACA------------AACCCACCACTAATTC---------------CGTGC--TTTGCTTGTAAACTTTTGTG-----TTGTGAAATACCTAT-------GT--ATTTCGATTTGGCACAAAAGAATCCGTCT----ACTTAATCG-TTATTTTTCGA-CAA--TCACACTTCAGTACTAGC--------------------ACAG--TGTTCCA--AGGTA--AAG-TT-------CTTCA-----------------------------AAATGGAAATGG---------AAATTATTT----GTT-------CACCT--CCACCTGCAA---------A-AGTTGAGTCACC---AGAT
droBia1 scf7180000301754:4652384-4652647 + ATTTAC--------AAACA------------AAACCATCACTAATTC---------------TGAGC--TTTCCTCTTGAACTTTTGTGTTGTGTTGCGAAATACATTT-------GT--ATTTCGATTGGGCACAAAACAATCCGTCT----ACTTAACCA-GTGGGTTTCGG-CTA--TTAAAATTCAGTAGTATT--------------------TTGG--ACAATACACAAAA--AAGC-GC-------TCAAAGAA----CATAA-------GAAATTGTAGTCATGGAAGCTGAAGCTCCGGAAAATAATGG----TA-------CACCC--TCATCTGCAAGTGGTTCCAA-GACTGAGTCACC---ATCG
droTak1 scf7180000415238:272983-273240 + ATTTAT--------AAACA------------AAACCACCACTAATTC---------------TGTGC--TTTGCTAGCGAACTTTCGTG-----TTGTGAAATACTTAT-------GT--ATTTCAATTTGGTACAAAACAAACCTAGT----ACTTAATCG-GTGGTTTTCGG-GTA--TAATAATTCAGTACA-AC--------------------ATTG--ACATTATACAAGA--AAGC-AT-------TCAAACAA----TACAA-------GAAATTATAATAATGGAAGCTCAAGCGATAGAAAATAATAA----CA-------CAGAT--TTATCTGCAAGTGGCTCCAA-AACTGAGTCATT---TGAA
droEle1 scf7180000487584:487-740 + ATAA------------ACAA-----------ACACCACCACTAATTC---------------TGTGC--TTTCCCTGTGAACTTTT-TG-----TTGTGAAATAACCTA----GAGCT--ATTTCGATAGGCTACCAAACAATCCATCC----ATTTAAGCG-TTTGCTCGCGG-TCA--TCTCATTTCAGTATTAAA--------------------GAAG--GCTATAA--CAAAT--ATA-CA-------TTAACAA---------A-------AAAATTAAAATCATGGAAACTGAAGCTCAAGAAAATAGTAA----TA-------CTTCT--TTGCCAGTAAGGAGTTTGAA-AACTGAGTCATCAGCAGAA
droRho1 scf7180000778170:19821-20083 - ATAA------------ACAA-----------ACACCACCACTAATTC---------------TGTGC--TTTTCCTGTGAACTTTTTGG-----TTGTGAAATAATACATATTTAGCT--ATTTCGATTGGCTACAAAACCATCCATCC----ATTTAAGCG-GTGGTTTTCGG-TCA--ACATAATTCAGTATTTGC--------------------GAAG--ACATTGAC-AAGA--CAGT-CG-------TTAAAAAA----TACAA------CAAAGTTAAAATTATGGAAGCTGAAGCTCAAGAAAATAATAA----TA-------CACCT--TTGTCTGCGAGCAGTCCCAA-AACTGAGTCATC---AGCA
droFic1 scf7180000454066:3368796-3369009 + CAA-------------TCA------------AAACGATGACAAAGTT---------------TGAGC--TTTTGA-----------TTA-----TTGTCAAATGTGAAA-------TT--ATTTCTGTGTGGGTCAGGTCGCACT-------------------------GCAAGTTTCTTTAATTTTCAGTATTGGC--------------------ATAG--ACGTTAAGAAA--GAAAGT-AC-----------AAAGTAAATAACA-------ACTATCTCAGCGATGGAAAAAGAATCTGAAGCAAATAATAG----TA-------CCCCCGATTTTCTG---A------CA------AAACAATT---GGAA
droKik1 scf7180000302366:405700-405956 - AGTCAC------------AGTTATCGCCAATGTGTCATCCCCAATTGTAAGCTCCAAAAG--------------CTCCAAACTTGGATG-----TTGTGAAATATTTA--------CC--ATTTCGAGTTTATACAAAACAATTCGTCC----ATTAAATAGAGTGTCTTTAGC-TCT--GCAAATTTCAGTATTCCT--------------------AAAA--ACTT-AACTTACA--AAGT-AC----ACAACCTGCG----------CAAAC--ACAAGGCAAACCATGGAAGCTGAGGACCAGGACC-----------TG-------TATTA--TTACTTTCCAC------CA--TCACCATCTACC---AGTG
droAna3 scaffold_13266:10952104-10952324 + ATAA------------ACA-------------AACCATCTCTA-TTT---------------TGTGC--TTTTTT---TAACTTTTA-A-----TGGTGAAATCATTCT--------G--ATTTCAACTGTCCACTAAACCATTTGTAC----ATTTAAACG-GAGCACCCCGGGTGT--AGCCTGCTCAGTATTTAA--------------------ATTG--AAGTTTTC-AAGG--GAGCTCC-------TTCT-----------------------G-TTCCACCATGGAGGCTCAAATCCAGGAAA-------CTGATT-------CATCC--TCAA-CGCAAG------TA------AAATTGCC---GGAA
droBip1 scf7180000396547:1512801-1513028 - ATAA------------ACA-------------ATTTATCACATA-TT---------------TGTGC--TTTTGT-TTGAACTTTT-TA-----TGGTGAAATCATTC--------CG--ATTTCAATTGGCTACTAAACATTTTGTAA----ATTTAAGCG-AAGCCCTCTGG-TAT--AGTCTGCTCAGTATTAAT--------------------ACAG--TAATTATA-AA-GG-AAGC--T-------CCTCGTG----------------------TTCCGCCATGGAAGTTCAAAGTCAGGAAA-------CTGATA-------CAACC--AACGCAACA-A------CGCAAGTAGCATTTCC---TGAA
dp5 XR_group6:3251739-3252002 + TTTCATAGTAG---CACCA------------TTCCCATCACTAACAT-------TAAAAGCTTTTAT--TTTG-GTGCGAGCTTTTG-C-----TTGCGAAATAATTTT-------GTTGCTTTCGAGCTCCCACTAAACAATCCGTCC----AGTTAAAAG-GCCGTCAGTGC------TTAATGCTTAGTTTTTGC--------------------ATAG--ATATTCGTAAC--GATAGC-AT----ATATTGTAGA----------GAGAATCAAACCAACAGCAATGGAATTCGAAACA------AACAATAG----TGCCAGTAGTACCA--CCATC----GA------CAA-AATTGAGCCATC---CCAA
droPer2 scaffold_9:1547058-1547325 + TTTCATAGTAG---CACCA------------TTCCCATCACTAACAT-------TAAAAGCTTTTGT--TTTG-GTGCGAGCTTTTG-C-----TTGCGAAATAATTTT-------GTTGCTTTCGAGCTCCCACTAAACAATCCGTCC----AGTTAAAAG-GCCGTCAGTGC------TTAATGCTTAGTTGTTGC--------------------ATAG--ATATTCGTAAC--GATAGC-ATATACATATTGTAGA----------GAAAAACAAACCAAAAGCAATGGAATTCGAAACA------AACAATAG----TGCCAGTAGTACCA--CCATC----GA------CAA-AATTGAGCCATC---CCAA
droWil2 scf2_1100000004382:865477-865718 + TAT-----------AAACG------------CGACCATCACTAATTC--------AAAAGCTTAAGTATTTCATTTGTA-ACTTAA--A-----T---------------------TG--AAATCAATTTGCTATAAAATGAAATATAA----GTTCAATAA-AA----ATAGA-TAG--TTTTTATTTAGGGTAAACGTAGACAGACAAAAAGGAACACAA--GATATAA--GAAAA--GGC-AA------------ATA----CTCAA-------GATATTACAAACAAAGAAATAATGGCC---GAAA-------GTGATC-------AACCT--GTAACGGCA-------------ATTGAGTCATCATCATCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTCAT--------TATCG------------AGCTCATCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTG-----TTGTGAAATAGCAGA-------GT--ATTTCGATACCTTACAAAACAATCCATCT----ATTTAACGA-GTGGTTTTTGA-CCA--ACACAACTCAGTATTGGC--------------------ATATAAACATTAA--AGGGG--AGA-CA-------TTACAAAA----TTCTA-------AAAATTATAACCATGGAAGCTGAAGCTCATGAAT-------GTAGAG-------CACCT--GTATCTGCAAA------CAT-AAGTGATTCATC---AGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................AATTC---------------TGTGC--TTTGCTTGTGAAC........................................................................................................................................................................................................................................................................................................2313.00300300000000000000
............................................................................................................................CGATACCTTACAAAACAA............................................................................................................................................................................................................................................1812.00200000200000000000
..............................................................................................................................................................................................................................................................................................................CTCATGAAT-------GTAGAG-------CACCT--G.......................................2111.00110000000000000000
............................................................................................................................................................................................................................................................................................TAACCATGGAAGCTGAAGCA..........................................................................2011.00110000000000000000
......................................................................................GTG-----TTGTGAAATAGCAGA-------GT--ATTTCG............................................................................................................................................................................................................................................................2611.00100001000000000000
.........................................................................................................................................AACAATCCATCT----ATTTAACGA-GTGGTT.................................................................................................................................................................................................................2711.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................GAG-------CACCT--GTATCTGCAAA------C......................2011.00100010000000000000
............................................................................................................................................................................................................................................................................TA-------AAAATTATAACCATGGAAGCTGA..............................................................................2511.00100000000001000000
.................................................................................................................................................ATCT----ATTTAACGA-GTGGTTTTTGA-C..........................................................................................................................................................................................................2511.00100100000000000000
......................................................................................................................................................................................................................................................................................................AGCTGAAGCTCATGAAT-------G...........................................................1811.00100000100000000000
..............................................C---------------TGTGC--TTTGCTTGTGAACTT......................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...............................................................................................................................................................................................................................................................................................................TCATGAAT-------GTAGAG-------CACCT--GTAA....................................2311.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................ATCTGCAAA------CAT-AAGTGATTCATC---AGC.2711.00101000000000000000
...................................................................................................................................................................................................................................TTAA--AGGGG--AGA-CA-------TTACAAAA----TTC..............................................................................................................2511.00100010000000000000
droSec2
TTTCAT--------TATCG------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTG-----TTGTGAAATAGCAGA-------GT--ATTTCGATACTTTACAAAACAATTCATCT----ATTTAACGG-GTGGTTTTTGA-CCA--ACGCAACTCAGTATTGGC--------------------ATATAAACATTAA--AGGGG--AGA-CA-------TTACAAAA----TTCTA-------AAATTTATAACCATGGAAGCTGAAGCTCAAGAAT-------GTAGTG-------CACCT--GTATCTGTAAA------CAA-AAGTGATTCATC---AGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................TTTGTG-----TTGTGAAATAGCAGA-------GT--..................................................................................................................................................................................................................................................................2311.0011000
........................................................................................G-----TTGTGAAATAGCAGA-------GT--A.................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................ATCTGTAAA------CAA-AAGTGATTCATC---....2411.0010010
...................................................................................TTTGTG-----TTGTGAAATAGCAGA-------GT--ATTT..............................................................................................................................................................................................................................................................2711.0010001
.......................................................................................................................................................................................................................................................................................................GCTGAAGCTCAAGAAT-------GTAGTG-------...............................................2211.0010010
.......................................................................................TG-----TTGTGAAATAGCAGA-------GT--ATTTCG............................................................................................................................................................................................................................................................2511.0010100
....................................................................................................AATAGCAGA-------GT--ATTTCGAT..........................................................................................................................................................................................................................................................1911.0010010
.......................................................................................TG-----TTGTGAAATAGCAGA-------G.....................................................................................................................................................................................................................................................................1811.0010001
.................................................................................CTTTTGTG-----TTGTGAAATAGCAGA-------......................................................................................................................................................................................................................................................................2311.0010010
.....................................................................................TGTG-----TTGTGAAATAGCAGA-------G.....................................................................................................................................................................................................................................................................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................CAA-AAGTGATTCATC---AGC.1811.0010010
.................................................................GC--TTTGCTTGTGAACTTTTGTG-----............................................................................................................................................................................................................................................................................................2211.0010001
dm3
TTTCAT--------TATCA------------AGCTCACCACTAATAT---------------TGTGC--TTTGCTTGTGAACTTTTATG-----TTGTGAAATAGCTGA-------GT--ATTTCGAATCTTTACAAAACAATCCATCT----ATTTAACTA-GTGGCCTCTGA-CCA--ACACAACTCAGTATTAGC--------------------ATAA--ACATTAA--AAGGG--ACA-CA-------TTACAAAA----TTCTA-------AAAATTATAACCATGGAATCTGAAGCTCAAGAAC-------GTACTG-------CACCT--GTATCTGCAAA------CAA-AAGTGATTCATC---AGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................AAGCTCAAGAAC-------GTACTG-------...............................................1817.0070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000500000
.....................................................................................TATG-----TTGTGAAATAGCTG..............................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001100000000100000000000000000000000000
.................................................................................................................................................................................A--ACACAACTCAGTATTAGC--------------------ATAA--ACA.......................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATG-----TTGTGAAATAGCTGA-------G.....................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AGCTCAAGAAC-------GTACTG-------CACCT--GTATC...................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................TG-----TTGTGAAATAGCTGA-------G.....................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TGGAATCTGAAGCTCAAGAAC-------GTACT.......................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CAAGAAC-------GTACTG-------CACCT--G.......................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------G...........................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................AAATTATAACCATGGAATCTGAAGCT..........................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GTACTG-------...............................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000
...................................................................................................................................................................GTGGCCTCTGA-CCA--ACAC..................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................A--ACATTAA--AAGGG--ACA-CA-------T............................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AACTCAGTATTAGC--------------------ATAA--ACATT.....................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GCTTGTGAACTTTTATG-----TTGTG.......................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCTCAAGAAC-------GTACTG-------CACC...........................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................GCTCAAGAAC-------GTACTG-------CACCT--GTATC...................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GTGAAATAGCTGA-------GT--ATTT..............................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................CTGAAGCTCAAGAAC-------GTACTG-------...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................TAACCATGGAATCTGAAGCTT.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AAC-------GTACTG-------CACCT--GTATCTGC................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ACCATGGAATCTGAAGCTCAAGAAC-------G...........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.......................................ACTAATAT---------------TGTGC--TTTGCTTG.............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................A--ACACAACTCAGTATTAGC--------------------AT..............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................ACTTTTATG-----TTGTGAAATAGCTGA-------G.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................AC-------GTACTG-------CACCT--GTATCTGCAAA------.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGCTCAAGAAC-------GTACTG-------C..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TG-------CACCT--GTATCTGCAAA------CAA-AAGTGA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................G-----TTGTGAAATAGCTGA-------GT--ATTTCG............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................A-GTGGCCTCTGA-CCA--ACA...................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AGTATTAGC--------------------ATAA--ACATTAA--.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................G-----TTGTGAAATAGCTGA-------GT--ATTT..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGC--TTTGCTTGTGAACTTTTATG-----TTG.........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GT..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TTGTGAAATAGCTGA-------GT--AT................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................G-----TTGTGAAATAGCTGA-------GT--ATTTCGA...........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GTGGCCTCTGA-CCA--ACACAAC...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GC--------------------ATAA--ACATTAA--AAGGG--A.........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................AT---------------TGTGC--TTTGCTTGTGAACTT......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...............................................................................................TGTGAAATAGCTGA-------GT--ATT...............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................CTTGTGAACTTTTATG-----TTGTGA......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GTA.........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................CTTGTGAACTTTTATG-----TTGTG.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................G-----TTGTGAAATAGCTGA-------GT--A.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAAGCTCAAGAAC-------GTACT.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGCTCAAGAAC-------GTACTG-------CACC...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................C--TTTGCTTGTGAACTTTTATG-----T...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GTACC.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GTACT.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................................................................A--ACATTAA--AAGGG--ACA-CA-------TTACAAAA----T................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................ATGGAATCTGAAGCTCAAGAAC-------GT..........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TAGC--------------------ATAA--ACATTAA--AAGGG--A.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................TGCAAA------CAA-AAGTGATTCA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATG-----TTGTGAAATAGCTGA-------GT--ATTTC.............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TAACCATGGAATCTGAAGCTCAAGAAC-------G...........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................TTGTGAAATAGCTGA-------GT--A.................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TGAACTTTTATG-----TTGTGAAATAGC................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................AGC--------------------ATAA--ACATTAA--AAGGG--A.........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTAA--AAGGG--ACA-CA-------TTACAAAA----TTCTA-------AA...................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATAA--ACATTAA--AAGGG--ACA-CA-------.............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................AGTATTAGC--------------------ATAA--ACATTAA--AAGGG--A.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................TAGCTGA-------GT--ATTTCGAAT.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................AACCATGGAATCTGAAGC...........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TCTGA-CCA--ACACAACTCAGTATTAGC--------------------A...............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCTCAAGAAC-------GTACTG-------CACCT--GT......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATCTGAAGCTCAAGAAC-------GTACTG-------C..............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCTCAAGAAC-------GTACTG-------CACCT--GTATG...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ACCATGGAATCTGAAGCT..........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................C--------------------ATAA--ACATTAA--AAGGG--A.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................ACCATGGAATCTGAAGCTCAA.......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CTCAAGAAC-------GTACTG-------CACCT--G.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TG-----TTGTGAAATAGCTGA-------GT--ATTTCGAA..........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AGTATTAGC--------------------ATAA--ACATTAA--AAGGG--AC........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................CTTTACAAAACAATCCATCT----ATTTAACT.........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATG-----TTGTGAAATAGCTGA-------GT--ATT...............................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGCTCAAGAAC-------GTACTG-------CA.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
TTTCAT--------TATCA------------AGCTCACCACT................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................GC--TTTGCTTGTGAACTTTTATG-----TTGTG.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................................................................ATG-----TTGTGAAATAGCTGA-------GT--ATTTT.............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..............................................T---------------TGTGC--TTTGCTTGTGAACTTTTATG-----T...........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ACCATGGAATCTGAAGCTC.........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................................................................................................................................................................................................................................AACCATGGAATCTGAAGCTCA........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................ATGGAATCTGAAGCTCAAG......................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ATGGAATCTGAAGCTCAAGAA....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TATG-----TTGTGAAATAGCTGA-------G.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AGAAC-------GTACTG-------CACCT--GTATCT..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TAA--AAGGG--ACA-CA-------TTACAAAA----TTCTA-------AAA..................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TAA--ACATTAA--AAGGG--ACA-CA-------TTACA........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
CTCAATATA-----AATCA------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGAGAACTTTTGTG-----TTGTGAAATACCAAT-------GT--ATTTCGATACTCTACTAAACAACGCATCTAAATATTTAACGA-GTGGCTTATGG-CCA--TCACAATTCAGTATTGGC--------------------ATAG--CCATTAA--AAGGG--AGA-CC-------TTAAAGAA----TTCAC-------AATATTATAACCATGGAAGCTGAAGCTCACGAAA-------GTAGTG-------CATCC--GTGTCTGCAAG------CAA-AAATAATTCTGC---GGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................ATTATAACCATGGAAGCTGA..............................................................................2011.0010000100
.....................................................................................................................................................................................................................................................................................................................AA-------GTAGTG-------CATCC--GTGTCTGCAAG------C......................2511.0010000100
......................................................................................................................................................................................................................................................................................ATATTATAACCATGGAAGCTGAAGCT..........................................................................2611.0010000100
..............................................................................................................................................................................................................................................................................................ACCATGGAAGCTGAAGCT..........................................................................1811.0010000010
....................................................................................................................................TACTAAACAACGCATCTAAATATTTAA...........................................................................................................................................................................................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................GAAA-------GTAGTG-------CATCC--GTGTCTGCA...............................2411.0011000000
droYak3
AATTCT--------AACCA------------AGCTCACCACTAATTC---------------TGTGC--TTTGCTTGTGAACTTTTGTA-----TTGTGAAATACAAAT-------GT--ATTTCGATACTTTACAAAACCATTCACAT----ATTTAAAGA-GTGGCTTTTGG-CCA--TCACAATTCAGTATTGGC--------------------ATAG--ACTTCAA--AAGGA--AGA-CC-------TTACGAAA----CTCAC-------AAAATTATAACCATGGAAGCAGAAGCTCACGAAA-------GTAGTC-------CATCC--TTATCTGCAAA------TAC-AAGTGATTCATC---AAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................ATTC---------------TGTGC--TTTGCTTGTGAACT.......................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................................................................................................................................................TTATCTGCAAA------TAC-AAGTGATT...........2211.00101000000000
.......................................................................................................................................................................CTTTTGG-CCA--TCACAATTCAGTATT.......................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................ACCATGGAAGCAGAAGCTCACGAAA-------GTA.........................................................2811.00100000010000
droEug1
TTACCTGTAAAGATAAACA------------AACCCACCACTAATTC---------------CGTGC--TTTGCTTGTAAACTTTTGTG-----TTGTGAAATACCTAT-------GT--ATTTCGATTTGGCACAAAAGAATCCGTCT----ACTTAATCG-TTATTTTTCGA-CAA--TCACACTTCAGTACTAGC--------------------ACAG--TGTTCCA--AGGTA--AAG-TT-------CTTCA-----------------------------AAATGGAAATGG---------AAATTATTT----GTT-------CACCT--CCACCTGCAA---------A-AGTTGAGTCACC---AGATSizeHit CountTotal NormTotal
No Reads
droBia1
ATTTAC--------AAACA------------AAACCATCACTAATTC---------------TGAGC--TTTCCTCTTGAACTTTTGTGTTGTGTTGCGAAATACATTT-------GT--ATTTCGATTGGGCACAAAACAATCCGTCT----ACTTAACCA-GTGGGTTTCGG-CTA--TTAAAATTCAGTAGTATT--------------------TTGG--ACAATACACAAAA--AAGC-GC-------TCAAAGAA----CATAA-------GAAATTGTAGTCATGGAAGCTGAAGCTCCGGAAAATAATGG----TA-------CACCC--TCATCTGCAAGTGGTTCCAA-GACTGAGTCACC---ATCGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTAT--------AAACA------------AAACCACCACTAATTC---------------TGTGC--TTTGCTAGCGAACTTTCGTG-----TTGTGAAATACTTAT-------GT--ATTTCAATTTGGTACAAAACAAACCTAGT----ACTTAATCG-GTGGTTTTCGG-GTA--TAATAATTCAGTACA-AC--------------------ATTG--ACATTATACAAGA--AAGC-AT-------TCAAACAA----TACAA-------GAAATTATAATAATGGAAGCTCAAGCGATAGAAAATAATAA----CA-------CAGAT--TTATCTGCAAGTGGCTCCAA-AACTGAGTCATT---TGAASizeHit CountTotal NormTotal
No Reads
droEle1
ATAA------------ACAA-----------ACACCACCACTAATTC---------------TGTGC--TTTCCCTGTGAACTTTT-TG-----TTGTGAAATAACCTA----GAGCT--ATTTCGATAGGCTACCAAACAATCCATCC----ATTTAAGCG-TTTGCTCGCGG-TCA--TCTCATTTCAGTATTAAA--------------------GAAG--GCTATAA--CAAAT--ATA-CA-------TTAACAA---------A-------AAAATTAAAATCATGGAAACTGAAGCTCAAGAAAATAGTAA----TA-------CTTCT--TTGCCAGTAAGGAGTTTGAA-AACTGAGTCATCAGCAGAASizeHit CountTotal NormTotal
No Reads
droRho1
ATAA------------ACAA-----------ACACCACCACTAATTC---------------TGTGC--TTTTCCTGTGAACTTTTTGG-----TTGTGAAATAATACATATTTAGCT--ATTTCGATTGGCTACAAAACCATCCATCC----ATTTAAGCG-GTGGTTTTCGG-TCA--ACATAATTCAGTATTTGC--------------------GAAG--ACATTGAC-AAGA--CAGT-CG-------TTAAAAAA----TACAA------CAAAGTTAAAATTATGGAAGCTGAAGCTCAAGAAAATAATAA----TA-------CACCT--TTGTCTGCGAGCAGTCCCAA-AACTGAGTCATC---AGCASizeHit CountTotal NormTotal
No Reads
droFic1
CAA-------------TCA------------AAACGATGACAAAGTT---------------TGAGC--TTTTGA-----------TTA-----TTGTCAAATGTGAAA-------TT--ATTTCTGTGTGGGTCAGGTCGCACT-------------------------GCAAGTTTCTTTAATTTTCAGTATTGGC--------------------ATAG--ACGTTAAGAAA--GAAAGT-AC-----------AAAGTAAATAACA-------ACTATCTCAGCGATGGAAAAAGAATCTGAAGCAAATAATAG----TA-------CCCCCGATTTTCTG---A------CA------AAACAATT---GGAASizeHit CountTotal NormTotal
No Reads
droKik1
AGTCAC------------AGTTATCGCCAATGTGTCATCCCCAATTGTAAGCTCCAAAAG--------------CTCCAAACTTGGATG-----TTGTGAAATATTTA--------CC--ATTTCGAGTTTATACAAAACAATTCGTCC----ATTAAATAGAGTGTCTTTAGC-TCT--GCAAATTTCAGTATTCCT--------------------AAAA--ACTT-AACTTACA--AAGT-AC----ACAACCTGCG----------CAAAC--ACAAGGCAAACCATGGAAGCTGAGGACCAGGACC-----------TG-------TATTA--TTACTTTCCAC------CA--TCACCATCTACC---AGTGSizeHit CountTotal NormTotal
No Reads
droAna3
ATAA------------ACA-------------AACCATCTCTA-TTT---------------TGTGC--TTTTTT---TAACTTTTA-A-----TGGTGAAATCATTCT--------G--ATTTCAACTGTCCACTAAACCATTTGTAC----ATTTAAACG-GAGCACCCCGGGTGT--AGCCTGCTCAGTATTTAA--------------------ATTG--AAGTTTTC-AAGG--GAGCTCC-------TTCT-----------------------G-TTCCACCATGGAGGCTCAAATCCAGGAAA-------CTGATT-------CATCC--TCAA-CGCAAG------TA------AAATTGCC---GGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................TTCAACTGTCCACTAAACCATTT.........................................................................................................................................................................................................................................2312.002020000
.................................................................................................................................................GTAC----ATTTAAACG-GAGCACCCCGGGTG.........................................................................................................................................................................................................2711.001000001
.........................................................................................................................................................................CCCGGGTGT--AGCCTGCTCAGTATTTAA--------------------................................................................................................................................................................2711.001100000
...............................................................................................................................................TTGTAC----ATTTAAACG-GAGCACCCCGG............................................................................................................................................................................................................2611.001000010
.....................................................................................................................................................................................................A--------------------ATTG--AAGTTTTC-AAGG--GAGC.......................................................................................................................................2111.001000001
........................................................................................................................................................................CCCCGGGTGT--AGCCTGCTCAG...........................................................................................................................................................................................2111.001100000
droBip1
ATAA------------ACA-------------ATTTATCACATA-TT---------------TGTGC--TTTTGT-TTGAACTTTT-TA-----TGGTGAAATCATTC--------CG--ATTTCAATTGGCTACTAAACATTTTGTAA----ATTTAAGCG-AAGCCCTCTGG-TAT--AGTCTGCTCAGTATTAAT--------------------ACAG--TAATTATA-AA-GG-AAGC--T-------CCTCGTG----------------------TTCCGCCATGGAAGTTCAAAGTCAGGAAA-------CTGATA-------CAACC--AACGCAACA-A------CGCAAGTAGCATTTCC---TGAASizeHit CountTotal NormTotal
No Reads
dp5
TTTCATAGTAG---CACCA------------TTCCCATCACTAACAT-------TAAAAGCTTTTAT--TTTG-GTGCGAGCTTTTG-C-----TTGCGAAATAATTTT-------GTTGCTTTCGAGCTCCCACTAAACAATCCGTCC----AGTTAAAAG-GCCGTCAGTGC------TTAATGCTTAGTTTTTGC--------------------ATAG--ATATTCGTAAC--GATAGC-AT----ATATTGTAGA----------GAGAATCAAACCAACAGCAATGGAATTCGAAACA------AACAATAG----TGCCAGTAGTACCA--CCATC----GA------CAA-AATTGAGCCATC---CCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................AATCAAACCAACAGCAATG......................................................................................1911.0010100000000
................................................................................................................................CTCCCACTAAACAATCCGTCC----.................................................................................................................................................................................................................................2111.0010001000000
.....................................................................................................................................................................................................................................CGTAAC--GATAGC-AT----ATATT...........................................................................................................................1911.0010100000000
..............................................................................................................................................................................................GTTTTTGC--------------------ATAG--ATATTCGG..................................................................................................................................................2011.0010100000000
....................................................................................................................GTTGCTTTCGAGCTCCCACTAAACAATCC.........................................................................................................................................................................................................................................2911.0010010000000
............................................................................................................................................................................................................................................................ATTGTAGA----------GAGAATCAAACCAACAG...........................................................................................2511.0010100000000
..................................................................................................................................................TCC----AGTTAAAAG-GCCGTCAG...............................................................................................................................................................................................................2011.0010100000000
................................................................................................................................................................................................................................................................................GAATCAAACCAACAGCAATGGA....................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................................ATCAAACCAACAGCAATGGAATT.................................................................................2311.0010100000000
droPer2
TTTCATAGTAG---CACCA------------TTCCCATCACTAACAT-------TAAAAGCTTTTGT--TTTG-GTGCGAGCTTTTG-C-----TTGCGAAATAATTTT-------GTTGCTTTCGAGCTCCCACTAAACAATCCGTCC----AGTTAAAAG-GCCGTCAGTGC------TTAATGCTTAGTTGTTGC--------------------ATAG--ATATTCGTAAC--GATAGC-ATATACATATTGTAGA----------GAAAAACAAACCAAAAGCAATGGAATTCGAAACA------AACAATAG----TGCCAGTAGTACCA--CCATC----GA------CAA-AATTGAGCCATC---CCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAT-----------AAACG------------CGACCATCACTAATTC--------AAAAGCTTAAGTATTTCATTTGTA-ACTTAA--A-----T---------------------TG--AAATCAATTTGCTATAAAATGAAATATAA----GTTCAATAA-AA----ATAGA-TAG--TTTTTATTTAGGGTAAACGTAGACAGACAAAAAGGAACACAA--GATATAA--GAAAA--GGC-AA------------ATA----CTCAA-------GATATTACAAACAAAGAAATAATGGCC---GAAA-------GTGATC-------AACCT--GTAACGGCA-------------ATTGAGTCATCATCATCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................AAAA--GGC-AA------------ATA----CTCAA-------GATATTA..............................................................................................2411.00101000
....................................................................................................................................TATAAAATGAAATATAA----GTTCA............................................................................................................................................................................................................................2211.00100100
.........................................................................................................................................................................ATAGA-TAG--TTTTTATTTAGGGT........................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................AAACGTAGACAGACAAAAA.....................................................................................................................................................................1911.00100010
......................................................................................................................................................................................................GTAGACAGACAAAAAGGAACACAA--..........................................................................................................................................................2411.00101000
..................................................................................................................................................................................................................................................................................................AAGAAATAATGGCC---GAAA-------GT..........................................................2020.50100100
.........................................................................................................................................................................................................................................................................................................AATGGCC---GAAA-------GTGATC-------AACC...........................................2120.50100010
....................................................................................................................................................................................................................................................................................................GAAATAATGGCC---GAAA-------GT..........................................................1820.50101000

Generated: 05/18/2015 at 10:54 PM