ID:

dsi_13297

 Coordinate:

x:20557-20698 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.8 -11.8 -11.7

Flybase annnotation

exon [x_20699_20994_+]; CDS [x_20699_20994_+]; exon [x_19867_20556_+]; CDS [x_19867_20556_+]; intron [x_20557_20698_+]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTAGTGTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATACCGGAGGTGGTAAGCTGAGACTTTCTTTAATAGGTTTGAGGAAATATCGTTTCTTAATTGGGTCACACCCCCACAAATTTACACGTTGTACGGAATATGAGTTCTCTGTTTATAAGTAATCTAACGATTGCCGGTTTTTTATTACAAGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGGC
********************************************************************...(((((((((((((((...)))))))....((((...))))...))))))))........(((((..........)))))............******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M053
female body
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
.....GTAGGGTCCAAGGAGTCGCTGACAT.................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GCTAAGTTCGGAAAGTGCAAAG.. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
....TGTAGGGTCCAAGGAGTCGCTGACATCA.................................................................................................................................................................................................................. 28 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
..........GTCCAAGGAGTCGCTGAC...................................................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............AGGAGTCGCTGACATCACAAGGC............................................................................................................................................................................................................ 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..........................................................................................................................................TGAGTTCTCTGTTTATAAGTAATC................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.....GTAGGGTCCAAGGAGTCGC.......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................................................................TAATAGGTTTGAGGAAATATC......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................ATTAGAAGCAGATCAAGAGGTA....................................... 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CTTCGCTAAGTTCGGAAAGTGCAAAGG. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATCAAGAGCTACGAAAGCGTGTCTTCGC...................... 28 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1
........................................................................................CGTTTCTTAATTGGGTCACACCCCCA................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..AGTGTAGGGTCCAAGGAGTCGC.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
GTAGTGTAGGGTCCAAGGAGT............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................GTACGGAATATGAGTTCTCTGTTT.......................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................................ATCAAGAGCTACGAAAGC................................ 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GAGCTACGAAAGCGTGTCTTCGCTAAGTT................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................AAGAGCTACGAAAGC................................ 15 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.................GAGTCGCTGACATCACAAGGC............................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TCAAGCAGATCAAGAGGTA....................................... 19 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AGCAGATCAAGAGGTA....................................... 16 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................GAAGCAGATCAAGAGGTA....................................... 18 2 5 0.40 2 0 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................................GCAGATCAAGAGGTA....................................... 15 1 5 0.40 2 0 0 0 1 0 0 0 0 1 0
........................................................................................................................................................................................................................TCGCTACGTTCGGAA........... 15 1 4 0.25 1 0 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................AAAAGCAGATCAAGAGGTA....................................... 19 2 5 0.20 1 0 0 0 1 0 0 0 0 0 0
...........................................GGACGTGGTAAGCTGCGA..................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................ATCAAGAGCTACCAAA.................................. 16 1 5 0.20 1 0 0 0 1 0 0 0 0 0 0
.........................................................................GGTTCGAGGAGATATCG........................................................................................................................................................ 17 2 12 0.17 2 0 0 0 2 0 0 0 0 0 0
.................................................................CTTGAATAGGCTTGAGG................................................................................................................................................................ 17 2 7 0.14 1 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................................................TTCGTAGAGTGCAAAGGC 18 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................CAATATGAGTTCTCT.............................................................................................. 15 1 8 0.13 1 0 0 0 0 0 0 0 1 0 0
.................................AAGGCGTACCGGAGTGGGT.............................................................................................................................................................................................. 19 3 8 0.13 1 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................AATCAGATCAAGAGGTA....................................... 17 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................AAAGCAGATCAAGAGGTA....................................... 18 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0
..............................................................TTTCTTTATTAGTTTTTAGGA............................................................................................................................................................... 21 3 20 0.10 2 0 0 0 0 0 0 0 2 0 0
..........................................................................................................................................................................................TAGCAGATCAAGAGGTA....................................... 17 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
...........................................................................TATGGGGAAATAGCGTTTCT................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 0 0 0 0 0 1
.............................................................................TGGGGAAATAGCGTTTCT................................................................................................................................................... 18 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1
....TGTAGGCTCCAAGAGGTCG........................................................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 1 0 0 0 0 0 0
..........................................AGGACGTGGTAAGCTG........................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCGTAGAGTGCAAAGGC 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CATCACATCCCAGGTTCCTCAGCGACTGTAGTGTTCCGTATGGCCTCCACCATTCGACTCTGAAAGAAATTATCCAAACTCCTTTATAGCAAAGAATTAACCCAGTGTGGGGGTGTTTAAATGTGCAACATGCCTTATACTCAAGAGACAAATATTCATTAGATTGCTAACGGCCAAAAAATAATGTTCGTCTAGTTCTCGATGCTTTCGCACAGAAGCGATTCAAGCCTTTCACGTTTCCG
********************************************************************************...(((((((((((((((...)))))))....((((...))))...))))))))........(((((..........)))))............******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 GSM343915
embryo
 SRR618934
dsim w501 ovaries
...............................................................................................................................................................................................................TCGCACAGAAGCGAGTCAAGCCTTTCACGT..... 30 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................TCGACTCTGAAAGAAATTATCCAAACT.................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................TTTAAATGGGCAGCATGGCTT.......................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................GATTCAAACTTTTCAGGTTTC.. 21 3 5 0.40 2 0 0 1 0 1 0 0
.......................................................................................................................................................................................................................AAGCGATTCAAACTTTTCA........ 19 2 5 0.20 1 0 0 1 0 0 0 0
...........................GTAGTGCTCCGTCTGGC...................................................................................................................................................................................................... 17 2 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................CCCATAGTGGGGGTATTTA........................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 1 0
........................................................................................................................................................................................................................AGCGATTCAAACTTTTCA........ 18 2 9 0.11 1 0 0 1 0 0 0 0
.........CCAGGCTCCTCTGCGACGG...................................................................................................................................................................................................................... 19 3 19 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:20507-20748 + dsi_13297 GTAGTGTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATACCGGAGGTGGTAAGC-TGAGACTTT----------------CTTTAA-TAGGTTTGAGGAAATATCGTTTC----------TTAATTGGGTCACACCCCCACAAATTTACACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGAATAT----------GAGTTCTCTGTTTATAAGTAATCTAACGATTGCCGGTTTT------------------T---TAT--------------------TACA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---C
droSec2 scaffold_108:20358-20599 + GTAGTGTAGGATCCAAGGAGTCGCTGACATCACAAGGCATACCGGAGGTGGTAAGC-TGAGACTTT----------------CTTTAA-TAGGTTTGAGGAAATATCGTTTC----------TTAATTGGGTCACACCCCCACAAATTTACACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGAATAT----------GAGTTCTCTGTTTATAAGTAATCTAACGATTGCCGGTTTT------------------T---TAT--------------------TACA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---C
dm3 chrX:30465-30705 + GTAGTGTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATATCGGAGGTGGTAAGC-TCAGACTTT----------------CTTAAT-TAGGTTTGAGGAAATATCGTTTT----------TTAATTAGGTCACTCCCCCACAAATTTACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGGAATT----------GAGTTCTCTTTTTATAAGTAATCTAACGGAAGCCGGTTTT----------------------TAT--------------------TCCA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---C
droEre2 scaffold_4644:15581-15855 + GTATTTTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATATCGGAGGTGGTAAGT-TAAGATTTTTTAGTAGTTCTTAATACTTTAAGTAGGCTTTAAGAATTATTGTTTCCAAAGCTATCTCATTTTGGTCACTCACCCAGAAATGTACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGGACGCTACAGAA-TT----------GACTTCTCTTTTTATAAGTAATCTAATAATAGCCAGTTTT----------------------ATT--------------------TCCA----------------AGCAGATCAAGAGCTACGAAAGCGTATCTTCGCTAAGTTCGGAAAGTGCAAAGG---C
droYak3 X:21302-21560 + GTAGTGTAGGGTCCAAGGAGTCTCTGACATCACAAGGCATATCGGAGGTGGTAAGT-TAAGATTTTTTAGCAGGTCTAAAGACTTTAAGTAGGCTGTAAGAAATATTTTCTCCAAAGCTATCTCA-TTTGGTAACTT--------------ACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGGACACCACGGAA-TT----------GATTTCTCTGTTTATAAGTAATCTTATGATAGCCAGTTTT-----------------------TT--------------------TCCA----------------AGCAGATCAAAAGCTACGAAAGCGTATCTTCGCTTAGTTCGGAAAGTGCAAAGG---C
droEug1 scf7180000409277:366148-366316 + GAAGTGTGGGCTCCAAGGAATCGCTGGCTTCACAAGGCATATCAGAGGTGGTACGTG-TTG---------GAG-----------------------------------------------------------------------------------T------------------TGTTCCTTTCAC-ATGAATAATATCTAA-------------------------------C-------------------------TAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTT----------------------GTCAT--------------------CCCG----------------CATAGATCAAGAGCTACGAGAGCGTATCATCACTGAGTTCGGATAGCGCCAAGG---C
droBia1 scf7180000301760:996555-996719 + GGACTGTGGGCTCCAAGGAGTCGCTGGCATCACAAGGCATATCAGAGGTGGTACGTG-CGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTGTATTCTGGCTTTTTTAAACGATTGGCTAACCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------TGT--------------------TCCT----------------TGCAGATCAAGAGCTACGAGAGTGTTTCCTCGCTGAGTTCGGACAGCGCCAAGGCGGC
droTak1 scf7180000415151:112338-112501 - GGAGTGTGGGCTCCAAGGAGTCGCTGGCATCGCAAGGCATATCAGAGGTGGTACGT-AGAGAT-----------------------------------------------------------------------------------------------------------------------------------AACTATCAG-------------------------------C-------------------------TATT-CTGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATT--AACATCTATA--T----T--ATAAT--------------------CCCC----------------TGCAGATCAAGAGCTACGAAAGTGTTTCCTCGCTGAGTTCGGAAAGCGCCAAGG---C
droEle1 scf7180000491011:1025956-1026015 + GAAGTGCGGGCTCCAAGGAGTCGCTGGCATCACAAGGCATATCGGAGGTGGTACGT-TGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779506:818378-818680 + GGAGTGTGGGCTCAAAGGAGTCACTGGCATCACAAGGCATATCGGAGGTGGTACGT-TCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAATCAAATTCGGTAGTAAAAACCCAGTGTTCCAGAAATCTCGTTTACTTTGAAACCAACCAAAGAGTAGGTTTTGAAAAATGTAAAATATCAAAGTGTAGAACTACAAATTCTGGAACGCTATGGAG-TTTTTCACCTAAAATATCCCCTTTTTTGCGTAAGCTCATA--AACTTATT----------------------GTAAT--------------------TCCG----------------CGCAGATCAAGAGCTACGAGAGCGTGTCTTCACTGAGTTCGGATAGCGCCAAGG---C
droFic1 scf7180000453927:476907-477078 + GGACTGCGGGCTCCAAGGAGTCGCTGGCATCACAGGGCATATCCGAGGTGGTACGTC-CTT---------AAC-----------------------------------------------------------------------------------T------------------T--------------G-AAA---------ATGAAGTATAAAATTTGTTTACTAAACTAACGA--------------------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AT---------------T-------GAAAT--------------------CTTG----------------CGCAGATCAAGAGCTACGAGAGTGTCTCCTCGCTCAGTTCGGATAGCGCCAAGG---C
droKik1 scf7180000302610:259257-259415 + GAAGTGTGGGCTCCAAGGAATCGCTGGCATCCCAGGGCATATCAGAGGTGGTGAGT-TTAT---------GAG-----------------------------------------------------------------------------------A------------------T--------------A-AAA---------ATG---TATA--------------------------------------------AAAAAT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGTTTAATCTGA--TAT---------------------TCC----------------CCCAGATCAAGAGCTATGAGAGCGTATCCTCGCTGAGTTCAGACAGCGCCAAGG---C
droAna3 scaffold_12929:1781193-1781352 - GAAGTGCCGGCTCCAAGGAGTCCCTGGCCTCGCAGGGCATATCCGAAGTGGTGAGTG-TGT---------CT------------------------------------------------------------------------------------C------------------TA-------------------------------------------------------------------------------------TT-CTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTGTTCTTAAATCTTATCCA------A-AAACCTATTTACAGATCAAAAGCTATGAGAGTGTATCCTCGCTGAGCTCGGAGAGCGCCAAGG---C
droBip1 scf7180000396543:238733-238893 - GAAGTGCCGGCTCCAAGGAGTCCCTGGCCTCGCAGGGCATATCAGAAGTGGTGGGT-TTAT---------CT------------------------------------------------------------------------------------A------------------T--------------A-A---------------------------------------------------------------------TT-CTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTGTTCCATGATCTCATCCT------G-AACCTGGTTTGCAGATCAAAAGCTATGAGAGTGTATCCTCGCTGAGCTCCGAGAGCGCCAAGG---C
dp5 XL_group1a:595050-595221 + GCAGTGTTGGCTCTAAGGAATCACTAGCATCACAAGGCATATCGGAAGTTGTAAGTG-TCT---------GTC-----------------------------------------------------------------------------------G--------------------------------------------------------------GATTGACCAGACTGACCATATCAAATCTTTATCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-CAATG--T-------GAAAT-C------------------TCTC----------------AACAGATCAAGAGCTATGAGAGTGTGTCCTCGCTGAGTTCGGAGAGTGCCAAGG---C
droPer2 scaffold_157:13108-13279 + GCAGTGTTGGCTCTAAGGAATCACTAGCATCACAAGGCATATCGGAAGTTGTAAGTG-TCT---------GTC-----------------------------------------------------------------------------------G--------------------------------------------------------------GATTGACCAGACTGACCATATCAAATCTTTATCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-CGATG--T-------GAAAT-C------------------TCTC----------------AACAGATCAAGAGCTATGAGAGCGTGTCCTCGCTGAGTTCGGAGAGTGCCAAGG---C
droWil2 scf2_1100000004963:2496387-2496573 + dwi_3987 GTTCCGTTGGATCTAAAGAATCCTTAGCCTCCCAAGGTATATCGGAAGTGGTAAGTG-AATA--------------------------------------------------------------------------------------------GAGAAAGAGAACGAGAGAGAGAACTCCTTAATTAAAAGTTAATTTCTGA-------------------------------A-------------------------TATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTT-----------------TT----TT-C------------------ATTT----------------TCCAGATCAAAAGCTATGAGTCGGTTTCTTCGCTTAGCTCAGATAGTGCCAAAC-AGC
droVir3 scaffold_12928:441404-441564 + GCAGCGTCGGCTCCAAGGAGTCGCTCGCATCCCAAGGCATATCGGAAGTGGTGAGC-ATAG---------CAG-----------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCCCTAGTCT-----------------------------------------------------------------------------------------------------------------------T-------GAAAT-C------------------TTTTAAGCAACAATTGCAATTGCAGATCAAGAGCTACGAGTCGGTGTCGTCGCTTAGCTCGGACAGCGCCAAGG---C
droMoj3 scaffold_6328:1399394-1399553 + GCAGCGTCGGCTCCAAGGAGTCGCTCGCATCACAAGGCATATCGGAGGCGGTAAGAG-CTT---------AAC-----------------------------------------------------------------------------------A------------------C--------------T---AAATTCCA--------------------------------------------------------ACTGTT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCTCATTCTCT--TCTTC------------------CTTG----------------CTCAGATCAAGAGCTATGAGTCGGTGTCTTCGCTCAGCTCGGACAGCGCCAAGG---C
droGri2 scaffold_15203:6869851-6870020 + GCAGCATCGGCTCCAAGGAGTCCCTTGCATCACAAGGCATATCGGAAGTTGTAAGTG-AAC-CATT----------------ATCAAA-TAGG----------------------------------------------------------------------------------------------------CAACATCAAAAATA---TATA--------------------------------------------T-TTTT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTGTTTGGCC-------T--------------------ATTT----------------TGCAGATCAAGAGCTACGAGTCGGTGTCATCGCTCAGCTCGGACAGCGCCAAGG---C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GTAGTGTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATACCGGAGGTGGTAAGC-TGAGACTTT----------------CTTTAA-TAGGTTTGAGGAAATATCGTTTC----------TTAATTGGGTCACACCCCCACAAATTTACACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGAATAT----------GAGTTCTCTGTTTATAAGTAATCTAACGATTGCCGGTTTT------------------T---TAT--------------------TACA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....GTAGGGTCCAAGGAGTCGCTGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00303000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTTCGGAAAGTGCAAAG.....2212.00202000000000000000
....TGTAGGGTCCAAGGAGTCGCTGACATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000000020000
..........GTCCAAGGAGTCGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00202000000000000000
...............AGGAGTCGCTGACATCACAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................T----------GAGTTCTCTGTTTATAAGTAATC............................................................................................................................................2411.00100000000100000000
.....GTAGGGTCCAAGGAGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.....................................................................................TAA-TAGGTTTGAGGAAATATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCTAAGTTCGGAAAGTGCAAAGG---.2711.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAGCTACGAAAGCGTGTCTTCGC.........................2811.00100000000000100000
..........................................................................................................CGTTTC----------TTAATTGGGTCACACCCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..AGTGTAGGGTCCAAGGAGTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
GTAGTGTAGGGTCCAAGGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GT--------ACGGAATAT----------GAGTTCTCTGTTT......................................................................................................................................................2411.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAGCTACGAAAGC...................................1811.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTACGAAAGCGTGTCTTCGCTAAGTT...................2911.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTACGAAAGC...................................1511.00100000010000000000
.................GAGTCGCTGACATCACAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
droSec2
GTAGTGTAGGATCCAAGGAGTCGCTGACATCACAAGGCATACCGGAGGTGGTAAGC-TGAGACTTT----------------CTTTAA-TAGGTTTGAGGAAATATCGTTTC----------TTAATTGGGTCACACCCCCACAAATTTACACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGAATAT----------GAGTTCTCTGTTTATAAGTAATCTAACGATTGCCGGTTTT------------------T---TAT--------------------TACA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....GTAGGATCCAAGGAGTCGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
............................ATCACAAGGCATACCGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGAAAGCGTGTCTTCGCTAAGTT...................2711.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTACGAAAGCGTGTCT.............................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTACGAAAGCGTGTCTTCGCTAA......................2911.0010100
...........................CATCACAAGGCATACCGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTAAGTTCGGAAAGTGC.........2611.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTAAGTTCGGAAA.............2211.0010100
dm3
GTAGTGTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATATCGGAGGTGGTAAGC-TCAGACTTT----------------CTTAAT-TAGGTTTGAGGAAATATCGTTTT----------TTAATTAGGTCACTCCCCCACAAATTTACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGGAATT----------GAGTTCTCTTTTTATAAGTAATCTAACGGAAGCCGGTTTT----------------------TAT--------------------TCCA----------------AGCAGATCAAGAGCTACGAAAGCGTGTCTTCGCTAAGTTCGGAAAGTGCAAAGG---CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTACGAAAGCGTGTCTTCGCT........................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTCTTCGCTAAGTTCGGAA..............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTAAGTTCGGAAAGTGC.........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTACGAAAGCGTGTCTTC...........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTCGCTAAGTTCGGAAAGTGC.........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTAAGTTCGGAAAGTGC.........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTAAGTTCGGAAAGTGCA........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................................................................TCACTCCCCCACAAATTTACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--------......................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTACGAAAGCGTGTCTTCGCT........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCTACGAAAGCGTGTCTTCGC.........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAAAGCGTGTCTTCGCT........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000
....................TCGCTGACATCACAAGGCATATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCCAAGGAGTCGCTGACATCACAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTACGAAAGCGTGTCT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................GTCGCTGACATCACAAGGCATATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTTCGGAAAGTGCAAAGG---C2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............AAGGAGTCGCTGACATCACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGTAGGGTCCAAGGAGTCGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................CGCTGACATCACAAGGCATATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAGTGTAGGGTCCAAGGAGTCGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAAGGAGTCGCTGACATCACAAGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTAAGTTCGGAAAGTGCA........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACGAAAGCGTGTCTTC...........................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGGAGTCGCTGACATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGCTAAGTTCGGAAAGTGC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ATCACAAGGCATATCGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......AGGGTCCAAGGAGTCGCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AAGGCATATCGGAGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CGCTGACATCACAAGGCATATCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGTTCGGAAAGTGCAAA......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.TAGTGTAGGGTCCAAGGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGTAGGGTCCAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGGAGTCGCTGACATCACTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GACTTT----------------CTTAAT-TAGGTTTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGGGTCCAAGGAGTCGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTAAGTTCGGAAAG............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAAAGCGTGTCTTCGCTAAGTTC..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......TAGGGTCCAAGGAGTCGCTGACATCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAGCTACGAAAGCGTGTCT.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAGTTCGGAAAGTGCATC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT--------ACGGGAATT----------GAGTTC.............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................GACATCACAAGGCATATCGGAGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTTCGCTAAGTTCGG................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGGGTCCAAGGAGTCGCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAGTTCGGAAAGTGCA........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GTAGTGTAGGGTCCAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTCGGAAAGTGCAAA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTCGCTAAGTTCGGAAAGTGC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAAGCCGGTTTT----------------------TAT--------------------..............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGTGTAGGGTCCAAGGAGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGCTACGAAAGCGTGTCTT............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTGTCTTCGCTAAGTTCG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGGTTTT----------------------TAT--------------------TCCA----------------AGCAG.....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGCTAAGTTCGGAAAGTGCAAA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droEre2
GTATTTTAGGGTCCAAGGAGTCGCTGACATCACAAGGCATATCGGAGGTGGTAAGT-TAAGATTTTTTAGTAGTTCTTAATACTTTAAGTAGGCTTTAAGAATTATTGTTTCCAAAGCTATCTCATTTTGGTCACTCACCCAGAAATGTACACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGGACGCTACAGAA-TT----------GACTTCTCTTTTTATAAGTAATCTAATAATAGCCAGTTTT----------------------ATT--------------------TCCA----------------AGCAGATCAAGAGCTACGAAAGCGTATCTTCGCTAAGTTCGGAAAGTGCAAAGG---CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................CGCTGACATCACAAGGCATATCGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.0060000006
.....TTAGGGTCCAAGGAGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
..............................CACAAGGCATATCGGAGGTGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATCAAGAGCTACGAAAGC...................................2211.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTAAGTTCGGAAAGTGCAAAGG---C2511.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGAAAGCGTATCTTCGCT........................2211.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTTCGCTAAGTTCGGA...............2011.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTTCGCTAAGTTCGGAAAGTG..........2511.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTTT----------------------ATT--------------------TCCA----------------AGCAG.....................................................1911.0010000010
droYak3
GTAGTGTAGGGTCCAAGGAGTCTCTGACATCACAAGGCATATCGGAGGTGGTAAGT-TAAGATTTTTTAGCAGGTCTAAAGACTTTAAGTAGGCTGTAAGAAATATTTTCTCCAAAGCTATCTCA-TTTGGTAACTT--------------ACTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGGACACCACGGAA-TT----------GATTTCTCTGTTTATAAGTAATCTTATGATAGCCAGTTTT-----------------------TT--------------------TCCA----------------AGCAGATCAAAAGCTACGAAAGCGTATCTTCGCTTAGTTCGGAAAGTGCAAAGG---CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................ATCACAAGGCATATCGGAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.....GTAGGGTCCAAGGAGTCTCTGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCTTAGTTCGGAAAGTGC.........2211.00100000010000
.....GTAGGGTCCAAGGAGTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
....................TCTCTGACATCACAAGGCATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGCTACGAAAGCGTAT...............................2011.00100000010000
............................ATCACAAGGCATATCGGAGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAGTTCGGAAAGTGCAAAGG---C2411.00100000010000
............................ATCACAAGGCATATCGGAGGTGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........................ACATCACAAGGCATATCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGCTTAGTTCGGAAAGTGCAAAGG---C2811.00100000010000
.....................CTCTGACATCACAAGGCATATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTTCGCTTAGTTCGGAAAGTGCA........2711.00101000000000
droEug1
GAAGTGTGGGCTCCAAGGAATCGCTGGCTTCACAAGGCATATCAGAGGTGGTACGTG-TTG---------GAG-----------------------------------------------------------------------------------T------------------TGTTCCTTTCAC-ATGAATAATATCTAA-------------------------------C-------------------------TAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTT----------------------GTCAT--------------------CCCG----------------CATAGATCAAGAGCTACGAGAGCGTATCATCACTGAGTTCGGATAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
droBia1
GGACTGTGGGCTCCAAGGAGTCGCTGGCATCACAAGGCATATCAGAGGTGGTACGTG-CGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------GCGTGTATTCTGGCTTTTTTAAACGATTGGCTAACCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------TGT--------------------TCCT----------------TGCAGATCAAGAGCTACGAGAGTGTTTCCTCGCTGAGTTCGGACAGCGCCAAGGCGGCSizeHit CountTotal NormTotal
No Reads
droTak1
GGAGTGTGGGCTCCAAGGAGTCGCTGGCATCGCAAGGCATATCAGAGGTGGTACGT-AGAGAT-----------------------------------------------------------------------------------------------------------------------------------AACTATCAG-------------------------------C-------------------------TATT-CTGTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATT--AACATCTATA--T----T--ATAAT--------------------CCCC----------------TGCAGATCAAGAGCTACGAAAGTGTTTCCTCGCTGAGTTCGGAAAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
droEle1
GAAGTGCGGGCTCCAAGGAGTCGCTGGCATCACAAGGCATATCGGAGGTGGTACGT-TGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGAGTGTGGGCTCAAAGGAGTCACTGGCATCACAAGGCATATCGGAGGTGGTACGT-TCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAATCAAATTCGGTAGTAAAAACCCAGTGTTCCAGAAATCTCGTTTACTTTGAAACCAACCAAAGAGTAGGTTTTGAAAAATGTAAAATATCAAAGTGTAGAACTACAAATTCTGGAACGCTATGGAG-TTTTTCACCTAAAATATCCCCTTTTTTGCGTAAGCTCATA--AACTTATT----------------------GTAAT--------------------TCCG----------------CGCAGATCAAGAGCTACGAGAGCGTGTCTTCACTGAGTTCGGATAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
droFic1
GGACTGCGGGCTCCAAGGAGTCGCTGGCATCACAGGGCATATCCGAGGTGGTACGTC-CTT---------AAC-----------------------------------------------------------------------------------T------------------T--------------G-AAA---------ATGAAGTATAAAATTTGTTTACTAAACTAACGA--------------------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----AT---------------T-------GAAAT--------------------CTTG----------------CGCAGATCAAGAGCTACGAGAGTGTCTCCTCGCTCAGTTCGGATAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
droKik1
GAAGTGTGGGCTCCAAGGAATCGCTGGCATCCCAGGGCATATCAGAGGTGGTGAGT-TTAT---------GAG-----------------------------------------------------------------------------------A------------------T--------------A-AAA---------ATG---TATA--------------------------------------------AAAAAT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGTTTAATCTGA--TAT---------------------TCC----------------CCCAGATCAAGAGCTATGAGAGCGTATCCTCGCTGAGTTCAGACAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
droAna3
GAAGTGCCGGCTCCAAGGAGTCCCTGGCCTCGCAGGGCATATCCGAAGTGGTGAGTG-TGT---------CT------------------------------------------------------------------------------------C------------------TA-------------------------------------------------------------------------------------TT-CTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTGTTCTTAAATCTTATCCA------A-AAACCTATTTACAGATCAAAAGCTATGAGAGTGTATCCTCGCTGAGCTCGGAGAGCGCCAAGG---CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
GAAGTGCCGGCTCCAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
............CCAAGGAGTCCCTGGCCTCGCAGGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCCTCGCTGAGCTCGGAGAGCGCCA.......2811.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGAGCTCGGAGAGCGCCAAGG---C2511.001010000
droBip1
GAAGTGCCGGCTCCAAGGAGTCCCTGGCCTCGCAGGGCATATCAGAAGTGGTGGGT-TTAT---------CT------------------------------------------------------------------------------------A------------------T--------------A-A---------------------------------------------------------------------TT-CTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTACTTGTTCCATGATCTCATCCT------G-AACCTGGTTTGCAGATCAAAAGCTATGAGAGTGTATCCTCGCTGAGCTCCGAGAGCGCCAAGG---CSizeHit CountTotal NormTotal
No Reads
dp5
GCAGTGTTGGCTCTAAGGAATCACTAGCATCACAAGGCATATCGGAAGTTGTAAGTG-TCT---------GTC-----------------------------------------------------------------------------------G--------------------------------------------------------------GATTGACCAGACTGACCATATCAAATCTTTATCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-CAATG--T-------GAAAT-C------------------TCTC----------------AACAGATCAAGAGCTATGAGAGTGTGTCCTCGCTGAGTTCGGAGAGTGCCAAGG---CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................ATCACAAGGCATATCGGAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020110000000
.........................AGCATCACAAGGCATATCGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCTCGCTGAGTTCGG................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGTGTCCTCGCTGAGTTC..................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGAGAGTGCCAAGG---.1811.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCCTCGCTGAGTTCGGA...............2011.0010000100000
...............................ACAAGGCATATCGGAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................AGCATCACAAGGCATATCGGAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAGCTATGAGAGTGT.................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAGCTATGAGAGTGTGTCCT............................2511.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGTGTCCTCGCTGAGTTCGGA...............2611.0010100000000
....................TCACTAGCATCACAAGGCATATCGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTGTGTCCTCGCTGAGT....................2111.0010100000000
.....................CACTAGCATCACAAGGCATATCGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
GCAGTGTTGGCTCTAAGGAATCACTAGCATCACAAGGCATATCGGAAGTTGTAAGTG-TCT---------GTC-----------------------------------------------------------------------------------G--------------------------------------------------------------GATTGACCAGACTGACCATATCAAATCTTTATCTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-CGATG--T-------GAAAT-C------------------TCTC----------------AACAGATCAAGAGCTATGAGAGCGTGTCCTCGCTGAGTTCGGAGAGTGCCAAGG---CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCGTGTCCTCGCTGAGTTC..................2311.001010000
............CTAAGGAATCACTAGCATCACAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................C-----------------------------------------------------------------------------------G--------------------------------------------------------------GATTGACCAGACTGACC...................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGAGTTCGGAGAGTGCCAAGG---C2511.001100000
droWil2
GTTCCGTTGGATCTAAAGAATCCTTAGCCTCCCAAGGTATATCGGAAGTGGTAAGTG-AATA--------------------------------------------------------------------------------------------GAGAAAGAGAACGAGAGAGAGAACTCCTTAATTAAAAGTTAATTTCTGA-------------------------------A-------------------------TATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTT-----------------TT----TT-C------------------ATTT----------------TCCAGATCAAAAGCTATGAGTCGGTTTCTTCGCTTAGCTCAGATAGTGCCAAAC-AGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCTATGAGTCGGTTTCTT............................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTATGAGTCGGTTTCTTCGC.........................2411.00100001
...CCGTTGGATCTAAAGAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
droVir3
GCAGCGTCGGCTCCAAGGAGTCGCTCGCATCCCAAGGCATATCGGAAGTGGTGAGC-ATAG---------CAG-----------------------------------------------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAAGCCCTAGTCT-----------------------------------------------------------------------------------------------------------------------T-------GAAAT-C------------------TTTTAAGCAACAATTGCAATTGCAGATCAAGAGCTACGAGTCGGTGTCGTCGCTTAGCTCGGACAGCGCCAAGG---CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................ATCCCAAGGCATATCGGAAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTCGTCGCTTAGCTCG.................2011.001100000000000000000000000000000000000000000000000000000000000000
............CCAAGGAGTCGCTCGCATCCCAAGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
.CAGCGTCGGCTCCAAGGAGTCGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGACAGCGCCAAGG---C1811.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
GCAGCGTCGGCTCCAAGGAGTCGCTCGCATCACAAGGCATATCGGAGGCGGTAAGAG-CTT---------AAC-----------------------------------------------------------------------------------A------------------C--------------T---AAATTCCA--------------------------------------------------------ACTGTT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCAGCTCATTCTCT--TCTTC------------------CTTG----------------CTCAGATCAAGAGCTATGAGTCGGTGTCTTCGCTCAGCTCGGACAGCGCCAAGG---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCTTCGCTCAGCTCGGACAGC...........2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGAGTCGGTGTCTTCGCT........................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGTGTCTTCGCTCAGCTCGGA...............2411.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAGAGCTATGAGTCGGTGTCTTCGC.........................2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCTCAGCTCGGACAGCGCCAAGG---C2711.001000001
droGri2
GCAGCATCGGCTCCAAGGAGTCCCTTGCATCACAAGGCATATCGGAAGTTGTAAGTG-AAC-CATT----------------ATCAAA-TAGG----------------------------------------------------------------------------------------------------CAACATCAAAAATA---TATA--------------------------------------------T-TTTT-C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTGTTTGGCC-------T--------------------ATTT----------------TGCAGATCAAGAGCTACGAGTCGGTGTCATCGCTCAGCTCGGACAGCGCCAAGG---CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTCGGTGTCATCGCT........................1911.00101

Generated: 05/19/2015 at 04:06 PM