ID:dsi_13295 |
Coordinate:3r:17249690-17249752 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -15.4 | -14.5 |
 |
 |
exon [3r_17249558_17249689_-]; CDS [3r_17249558_17249689_-]; CDS [3r_17249753_17249881_-]; exon [3r_17249753_17249881_-]; intron [3r_17249690_17249752_-]
No Repeatable elements found
| ##################################################---------------------------------------------------------------################################################## CGGGCAAGACCACGATACTGAAGCAGCTGGCATCGGAGGACATAACCACGGTGCGTATAAAGGCGGCGAACTTCTTCCGTTTTCCCCATAAAATACGGAGTGAAATCCCGCAGGTAACGCCCACGGCAGGATTTAACATCAAGTCCGTGGCAGCCGATGGTTT **************************************************............((((.((..(((((((((.((........)).)))))).))).))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M024 male body |
M053 female body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................CAGGATTTAACATCAAGTC.................. | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...............................................................................TTTTCCCCATAAAATACGGAGTG............................................................. | 23 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| .........................................................................................AAACTACGGACTGAATTCCCGC.................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| CGGGCACGACCACGA.................................................................................................................................................... | 15 | 1 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 |
|
GCCCGTTCTGGTGCTATGACTTCGTCGACCGTAGCCTCCTGTATTGGTGCCACGCATATTTCCGCCGCTTGAAGAAGGCAAAAGGGGTATTTTATGCCTCACTTTAGGGCGTCCATTGCGGGTGCCGTCCTAAATTGTAGTTCAGGCACCGTCGGCTACCAAA
**************************************************............((((.((..(((((((((.((........)).)))))).))).))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
M023 head |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................TGCCGCCCTATATTGTAG....................... | 18 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................TCGACCGTAGCCTCCG........................................................................................................................... | 16 | 1 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .......................................................................................................................GCGTGCTGTCCCAAATTGT......................... | 19 | 3 | 11 | 0.09 | 1 | 0 | 1 | 0 |
| ...............ATGACTTCGTGGTCCGAAG................................................................................................................................. | 19 | 3 | 12 | 0.08 | 1 | 0 | 0 | 1 |
| .........................................................................................................................................TGGTTCAGGCACGGTCG......... | 17 | 2 | 16 | 0.06 | 1 | 1 | 0 | 0 |
| ................................................................................................CCACACTTTATGGCGT................................................... | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 |
Generated: 04/23/2015 at 03:47 PM