ID:

dsi_13266

 Coordinate:

3l:21026113-21026262 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.3 -10.2 -10.2

Flybase annnotation

five_prime_UTR [3l_21025772_21026112_+]; exon [3l_21025772_21026112_+]; intron [3l_21026113_21026697_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAATAAAGTTATTAACAAGTGGTGTTTGCATAATTTACTCCCAAAAACTGGTAAGTCCGCAGAAAAGAAAATAAAGTGACCCACATACTTACATTGATACTCATGAATGCATGTATGTATATGAGTAGGTGTTTGTCTCATACATGAAGGCACGCATACAACCTTGGACTCTCACACACGTCAATGACAAGCAACAGTGCAAAAGTAGTGCTGGAAAGTGTCCTCGAAAATCCTTAATGTAATTTTTCAA
***************************************************************************************************************...........((((((((((.(((((((....)).))))).)).....))))...)))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR618934
dsim w501 ovaries
 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 GSM343915
embryo
...................................................................................................................................................................................................AGTGCAAAAGTAGTGCTGGA................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAGTAGTGCTGGAAAGTGTC............................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...................................................TAAGTCCGTAGAAAAGAAAAT.................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
...............................................................................................................TGTATGTATATGAGTAGGTG....................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................TTACATTGATACTCATGAATG............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................CTGGTAAGTCCGTAGAAAAGAA..................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................AATGCATGTATGTATATGAGT............................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................TGTATATGAGTAGGTGTTTGT.................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CACGCATACAACCTTGGACTCT.............................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................TATGTATATGAGTAGGTGTT..................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................GTTTGTCTCATACATGAAG..................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................CACGCAGACAACCTTGGACTTT.............................................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................TACAACCTTGGACTCTCACACAC....................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................AGTGCACAAGTAGTGC....................................... 16 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...................................................TAAGTCCGCAGAAAAGAAAAT.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AACAGTGCAAAAGTAGTGCTG..................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCATACATGAAGGCACGCAGAC........................................................................................... 22 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.AATAAAGTTATTAACAAGTGG.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................GACAAGCTACAGTCCAAA............................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAAAGAAGTGTTGGACAGTGT............................. 21 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................TGCACAAGTAGTGCGGGA................................... 18 2 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
......AGTTTTTAACAAGTGGTGT................................................................................................................................................................................................................................. 19 1 6 0.17 1 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................ACACAGGTCAATGACAAA........................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0 0
.........................................................................................................................TGAGTAGGTGTCTGTC................................................................................................................. 16 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................TACTCATGAATGGAT.......................................................................................................................................... 15 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................AATTGTCCTCGAAAA.................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................TGTAAAGTGTCTTCGAAGA.................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTTATTTCAATAATTGTTCACCACAAACGTATTAAATGAGGGTTTTTGACCATTCAGGCGTCTTTTCTTTTATTTCACTGGGTGTATGAATGTAACTATGAGTACTTACGTACATACATATACTCATCCACAAACAGAGTATGTACTTCCGTGCGTATGTTGGAACCTGAGAGTGTGTGCAGTTACTGTTCGTTGTCACGTTTTCATCACGACCTTTCACAGGAGCTTTTAGGAATTACATTAAAAAGTT
******************************************************************************...........((((((((((.(((((((....)).))))).)).....))))...)))).*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902008
ovaries
 O002
Head
.................................................CCATTCAGGCGTCTTTTCTTT.................................................................................................................................................................................... 21 0 1 4.00 4 1 3 0 0 0 0 0 0 0
...................................................ATTCAGGCGTCTTTTCTTTTA.................................................................................................................................................................................. 21 0 1 4.00 4 4 0 0 0 0 0 0 0 0
.....................................................TCAGGCGTCTTTTCTTTTATT................................................................................................................................................................................ 21 0 1 3.00 3 0 3 0 0 0 0 0 0 0
.................................................CCATTCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 22 0 1 3.00 3 2 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACAGGAGCTTTTAGGAATTAC........... 21 0 1 3.00 3 2 0 0 0 0 1 0 0 0
.....................................................TCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0
........................................................................................................................................................GCGTATGTTGGAACCTG................................................................................. 17 0 1 2.00 2 0 0 0 0 2 0 0 0 0
...........................................................................................................................................................................................................................CAGGAGCTTTTAGGAATTACA.......... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.......................................GGGTTTTTGACCATTCAGGCAT............................................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................AAACAGGAGCTTTTAGGAATTAC........... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................TCAGGCGTCTTTTCTTTTA.................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................TTTGACCATTCAGGCGTCTTT......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................TGTTGGAACCTGAGAGTGTGT........................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GCGTTGTCACGTTTTCATCA......................................... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................TTCACAGGAGCTTTTAGGAA............... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................ATTCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0
............................................................................................................................................................................................................................AGGAGCTTTTAGGAATTACATT........ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................GGGTTTTTGACCATTCAGGCG.............................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................CAGGCGTCTTTTCTTTTATTT............................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ACGGGAGCTTTTAGGAATTAC........... 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................TTGACCATTCAGGCATCTTTT........................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0
..................CACCACAAACGTATTAAATGAG.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCACAGGAGCTTTTAGGAA............... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCACAGGAGCTTTTAGGAAT.............. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................AAGGGTTTTTGACCATTCAGGC............................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................GTGTGTGCAGTTACTGTT............................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................TGTCTGTTGGAACCTGAGAGT............................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTCTGTTGGAACCTGAGAGT............................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................GTGTGTGCAGTTACTGTTCGT......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................CAGGCGTCTTTTCTTTTATTTC.............................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................................TAGGAATTACATTAAGGAGTT 21 2 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................ACCTGAGAGTGTGTGCAGTTA................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACAGGAGCTTTTAGGAAT.............. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................CATTCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................TTGACCATTCAGGCGTCTTTTC....................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTCACAGGAGCTTTTAGGAAT.............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................TCCACAAACAGAGTATGTACT....................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................AATCGTTGTCACGTTTTCATCAC........................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACAGGAGCTTTTAGGAATT............. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................GAGGGTTTTTGACCATTCAGGC............................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TAGGAGCTTTTAGGAATTA............ 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................TTCAGGCGTCTTTTCTTTTA.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1
.....................................................GCAGGCGTCTTTTCTTTTATT................................................................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TGCGTATGTTGGAACCTGAGA.............................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................TTTCCGTGCGTCTGTTGGAAC.................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................TTTCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTAGGGATTACATTGAGAAGT. 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0
.....................................................CCAGGCGTCTTTTCTTTT................................................................................................................................................................................... 18 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................CTTTCGTGCCTATGCTGGAA..................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................TGACAGGGTGTGCAGTTAG................................................................ 19 3 15 0.07 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................TTGGCCCCTGAGAGTG........................................................................... 16 2 17 0.06 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................................................ACTGTTCGCTGTCACGG................................................. 17 2 19 0.05 1 0 0 0 1 0 0 0 0 0
.................................................................................................ATGAGTACATACGTA.......................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21026063-21026312 + dsi_13266 CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTCAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-TC--TCATACATGAA--------------------G--GCACGCATACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTAATTT----------TTCAA
droSec2 scaffold_11:1429392-1429641 + CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTCAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-TC--TCATACATGAA--------------------G--GCACGCAGACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTCATTT----------TTCAA
dm3 chr3L:21509705-21509954 + CAATAAAGT---------TATTAAG-AAGTGGTGTTTACATAATTTA--CTCCC----AAAAATTGGTAAGTC------CGCAGCAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTTAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-CC--TTATACATGAA--------------------G--GCACGCAGACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTCTATT----------TTAAA
droEre2 scaffold_4784:21162934-21163185 + CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCT----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----ATATATTAATAC-------TC-------ATGTATGTATG----T-ATATGGGTTGGTGT-----T---------GG-TC--TCATACATGCA--------------------G--ACACGCAGACAACCTTG-GACTCTCACACTA---CCGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ACGTAACTT----------AAAAA
droYak3 3L:19020286-19020536 - CAATAAAGT---------TATAAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TAATACTCAT---GT-------ATGTACATATG----T-ATATGGGTTGGTGT-----T---------TG-TC--TCATACATG-A--------------------G--GCACGCAGACAACCTTG-GACTCTCACACTA---CCGTCAATGACAAGCAACAGTGCAAA-----AATAGTGCTGGAAAGTGT-CTTTG-AAAAT------C---------------------CTTA-----ACGTAATTT----------ATAAA
droEug1 scf7180000409472:328868-329093 + AAATACAAT---------TTTTGAA-GTGTGGTGTTTGCATAATTTA--CATCA----AAAAACTGGTAAGTT------CGCAGAAAAAG-AA-AAT-AAATGACCCACATA--CTTAC----AT----TCGTACG------------------------------T-ATGTGCGGCGGTGA----------------A-TC--TCATACATATA--------------------G--GCACGCACACCGCCTTG-GACTTGCACACT----ACGTCA----CGAGCAACAGTGTTGA-----TACAGTGTTGAAAAATGA-CCTCG-GGAAA------C---------------------CTAA-----A---AATTT----------TGAAA
droBia1 scf7180000302377:1819222-1819450 - CATTAGTGG---------TTTTAGC-GAGTGATGTTTGCATAATTTA--CACCT----AAAAACTGGTAAGTC------CGAAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TTGTACG------------------------------T-ATGTGCGGC----T-----G---------TG-TC--CCATACATATA--------------------G--GCACGCACACAACCTTG-GCCTCGCACACT----GCGTCACCGAAGAGCAACAGTGTTAA-----AACAGTGCTGGAAGGTGC-CCCCA-GAAAT------T---------------------CTAG-----A--TAATTT----------AAAAA
droTak1 scf7180000415388:179669-179900 + CAACAAAGT---------T--TAA--GCGAGGTGTTTGCATAATTTA--CATCT----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAATGACCCACATA--CTTAC----AT----TTGTACA------------------------------T-ATGTGTGGCGGTGT-----G---------CG-CC--TCATACATATA--------------------G--GCACGCACACAACCTTG-GCCTCGCAC-----CTACGTCACCGACGAGCAACAGTGTTGA----GACCAGTACTGGGAAATGC-CCTCG-GAAAT------C---------------------CTTA-----CCAAATTTT----------GAAAA
droEle1 scf7180000491255:2778574-2778823 - CATTAAAGT---------TGTTAAC-AAGTGGTGTTTGCATAATTTA--CATCG----AAAAACTGGTAAGTC------CGCAGAAAAGAAAA-A-TAAAATGACCCACATC-ACACACTCGCAT----TT-----------GC-------AAGTATGTATG----TTATGTGCGGCGGTGT-----G---------TG-TC--TCGTACATAAA--------------------G--GCACGCACACAACCTTG-GACTCACACACT----ACGTCACCGACGAGCAACAGTGTTGA-----GTTAGTGCTGGAAAATGT-CCTCG-GAAAT------C---------------------CTAA-----ACATAATTT----------TGAAA
droRho1 scf7180000779324:47198-47445 - CCTTAAAGT---------TTTTAAC-AAGTGGTGTTTGCATAATTTA--CATC-----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAATGACCCACATC--CACACTTACAT----TT-----------GC-------AAGTAGGTATG----TTATGTGCGGCGGTGT-----G---------TG-TC--TCATACATAAA--------------------G--TCACGCACACAACCTTG-GACTCGCACACT----ACGTCACCGACGAGCAACAGTGTTGA-----AGCAGTGCTGGAAAATGT-GCTCG-GAAAT------C---------------------CTTA-----ACATAATTTT---------GAAAA
droFic1 scf7180000453831:336642-336884 + GTTTAAACT---------TTCAAAA-GAGTAGTGTTTGCATAATTTA--CAGCAAAAAAAAAACTGGTAAGTA------CGAAGAAAAGAAAA-A-TAAAATGACCCACATC--CATACTTACAT----TTGT----------------------ACGTATG----T-TGGTGCGTCGGTGT-----A---------TG-TC--TCATGCACTTA--------------------G--GCACGCACACAACGTTG-TAATCGCAC-----ATACGTCAGCGACAAGCAACAGTGTAAA-----AACAGTGCTGGAAAATAT-CCT-----AAG------C---------------------CTTA-----ACAAAATTT----------GAAAA
droKik1 scf7180000302694:367599-367861 + CCA-AACGT---------TATGAAA-TAGTGCCGTTTGTGAAATTAA--AAACTG-AAAGAAACTGGTAAGTC------CGTAGAAC-----AAT-AAAAATGACCCACATA--CAAACGTACAT----TTGCAT-------GATTT------G------------C-GGTTGTGT----GC-----G---------TG-TCCCTAATACATATT--------------------C--GCACGCATACAGCCTTG-GACTTGCAC-----ATACGTCACCGACGAGCAACAGTGTTAA-----AACAGTGCTGGAAAATGC-GTGCG-GAAATCTTAAGTTTCAAGTTGTCTGTTCGTAATTTTA-----ATAAA--------------ATTAA
droAna3 scaffold_13337:17123160-17123391 - CGTCAATGT---------CCTTAA--AAGTGGTGTTTGCATAATTTT--CCCA---ACAAAAACAGGTAAGTT------CTCAGAA-----CA-A-TAAAGTGGCCCACATC--CATAC----GT----ATATTCTTGC---GT-------ATGTTTGTATG--------------------------------------CC--CCTTGC----A--------------------G--CTTCACACACACTTTTG-TA---AGACACT----ACGTCACCGACGAGCAACAGTGCTAA-----AACAGTGTTGTAAAGTAT-CCTTG-GAAAT------C---------------------ATTG-----AATTAATTTAAAATATATTTAAAA
droBip1 scf7180000396641:611498-611728 - CGTTAAGGT---------CCTTAA--AAGTGTTGTTTGCATAATTTA--TCCA---ACAAAAACAGGTAAGTC------CGCAGAA-----CA-A-TAAAGTGACCCACATC--CATAC----GT----ATATTCTTTC---GT-------ATGTTTGTATG----T-A-----------GT-----A---------TG-CC--CCTTGCA------------------------GCTTCACGCACACTTTTATA------AAATACT----ACGTCACCGACGAGCAACAGTGCTAA-----AACAGTGCTGTATAATAT-TCTCG-GAAAT------C---------------------CTTA-----AATTAATTTTA--------AATAA
dp5 XR_group6:13046640-13046914 - TACTAGTGC---------GTTTCACAAAGTGGCGTTTGCATAATTAA--TGCAT----ATAAACTGGTAAGTCATACACCGTAGAA-----CA-A-TAAAATGACCCATATATGCGTTCTTACAT----CTGTATA---AGA--CATGTGTATGCATGCAAGTTTCC-TTGTGTGCAAGTGT-----T---------CGGCC--ATATATATGTT--------------------T--TTACACACACAACTATACGTC--CCATACTACATACGTCACCGACGCGCAACAGTGTAAA-----AACAGTGCTATAAAATGTGTTTCGTAAAAA------A---------------------CTGA-----ATTTTTTTT----------ATCAA
droPer2 scaffold_88:74697-74971 - TACTAGTGC---------GTTTCACAAAGTGGCGTTTGCATAATTAA--TGCAT----ATAAACTGGTAAGTCATACACCGTAGAA-----CA-A-TAAAATGACCCATATATCCGTTCTTACAT----CTGTATA---AGA--CATGTGTATGCATGCAAGTTTCC-TTGTGTGCAAGTGT-----T---------CGGCC--ATATATATGTT--------------------T--TTACACACACAACTATACGTC--CCATACTACATACGTCACCGACGCGCAACAGTGTAAA-----AACAGTGCTATAAAATGTGTTTCGTAAAAA------A---------------------CTGA-----ATTTTTTTT----------ATCAA
droWil2 scf2_1100000004540:1151265-1151495 + AAGTATTTGATTAAATGACATTG---AAACGAAGTTTGCATAATTGTTAAACGT----GAAATCTGGTAAGTCA-----TGCAAGCAAGAACA-A-TAAAATGACCCATATC--CATAC----AT----ATGTACATAT---GC-------ACATACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGCACACACATTGCCA-GTAATAAAA-----ATACGTCACTGTGTGTGGATAGTGTGAA-----A--AGTGTTGGAAAGTGT-TTTCA-AAATA------T---------------------ATG---------AAAT-------------TCAA
droVir3 scaffold_13049:13674268-13674470 - -----------------------------------------------------------AAAATTGGTAAGTC------TATAGAAC----AA-A-TAAAATGACCCACATA--CATAC----AT----GCATAAAAAT---AC-------ATGTACAT---------------------GAATATTGTGCATGTATTG-AC--ATACACATA-CGAGGTGACTGCATTCTTGCCG--------------CTCCA-CAATTATTTGTT----AAATT------------CCGGACACAACTA-A--TTTGTTTTAAA--AT-TCTTA-AAAAT------T---------------------CTATCCTTAACATACGTA----------TGCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTCAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-TC--TCATACATGAA--------------------G--GCACGCATACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTAATTT----------TTCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................AGTGCAAA-----AGTAGTGCTGGA...............................................................................2011.00100010000000000000
........................................................................................................................................................................................................................................................................................................AA-----AGTAGTGCTGGAAAGTGT-C.......................................................................2111.00100000000010000000
............................................................................................................................................................TGTATG----T-ATATGAGTAGGTG.....................................................................................................................................................................................................................2011.00110000000000000000
...................................................................................................................TTAC----AT----TGATACTCAT---GA-------ATG................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................A-------ATGCATGTATG----T-ATATGAGT..........................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................................................................................TG----T-ATATGAGTAGGTGT-----T---------TG-T.................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................CACGCATACAACCTTG-GACTCT....................................................................................................................................2211.00100010000000000000
..............................................................................................................................................................TATG----T-ATATGAGTAGGTGT-----T---------.....................................................................................................................................................................................................2011.00100001000000000000
....................................................................................................................................................................................GT-----T---------TG-TC--TCATACATGAA--------------------G--............................................................................................................................................................1911.00100001000000000000
.....................................................................................................................................................................................................................................................TACAACCTTG-GACTCTCAC-----ACAC........................................................................................................................2311.00100000100000000000
...................................................................TAAGTC------CGCAGAAAAGA-AA-A-T.........................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................AACAGTGCAAA-----AGTAGTGCTG.................................................................................2111.00110000000000000000
.AATAAAGT---------TATTAAC-AAGTGG..........................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
droSec2
CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTCAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-TC--TCATACATGAA--------------------G--GCACGCAGACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTCATTT----------TTCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....AAAGT---------TATTAAC-AAGTGGTGT.......................................................................................................................................................................................................................................................................................................................................................................2114.0040202
.....................................................................................................................AC----AT----TGATACTCAT---GA-------ATGCAT.............................................................................................................................................................................................................................................2211.0011000
.......................................................................................................................................................................................................................................................................................................AAA-----AGTAGTGCTGGAAAGTGT-........................................................................2111.0010100
............................................................................................................................................................TGTATG----T-ATATGAGTAGGTGT-----...............................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................GTATG----T-ATATGAGTAGGTGT-----T---------.....................................................................................................................................................................................................2111.0010100
..ATAAAGT---------TATTAAC-AAGTGGT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...................ATTAAC-AAGTGGTGTTTGCA..................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...TAAAGT---------TATTAAC-AAGTGGTGT.......................................................................................................................................................................................................................................................................................................................................................................2211.0010001
.........................................................................................................................................................................................................................................................................................................A-----AGTAGTGCTGGAAAGTGT-CCTC....................................................................2311.0010001
..................................................TCCC----AAAAACTGGTAAGTC------C..........................................................................................................................................................................................................................................................................................................................2011.0010001
..................TATTAAC-AAGTGGTGTTTGCA..................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.....AAGT---------TATTAAC-AAGTGGTGTT......................................................................................................................................................................................................................................................................................................................................................................2111.0010001
...........................................................AAAACTGGTAAGTC------CGCAGA.....................................................................................................................................................................................................................................................................................................................2011.0010100
..................TATTAAC-AAGTGGTGTTTGCATA................................................................................................................................................................................................................................................................................................................................................................2311.0010100
dm3
CAATAAAGT---------TATTAAG-AAGTGGTGTTTACATAATTTA--CTCCC----AAAAATTGGTAAGTC------CGCAGCAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TGATACTTAT---GA-------ATGCATGTATG----T-ATATGAGTAGGTGT-----T---------TG-CC--TTATACATGAA--------------------G--GCACGCAGACAACCTTG-GACTCTCAC-----ACACGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTCTATT----------TTAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....AAAGT---------TATTAAG-AAGTGGTGT.......................................................................................................................................................................................................................................................................................................................................................................21120.00200000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000100011000000000010001001000001501010000000
.....AAGT---------TATTAAG-AAGTGGTGTT......................................................................................................................................................................................................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000001000000000400032001000
..................TATTAAG-AAGTGGTGTTTACA..................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000001000000
..ATAAAGT---------TATTAAG-AAGTGGT.........................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000201000000000000000000000000000000000
..................................................TCCC----AAAAATTGGTAAGTC------CGT........................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000010000000000
......AGT---------TATTAAG-AAGTGGTGTTT.....................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................TGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CT...............................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AAAATTGGTAAGTC------CGCAGCAA...................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000
...TAAAGT---------TATTAAG-AAGTGGTGT.......................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000
......AGT---------TATTAAG-AAGTGGTGTT......................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100001000000
....................................................................................................................................TACTTAT---GA-------ATGCATGTATG----T-..................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TAATTTA--CTCCC----AAAAATTGG.......................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................GTGTTTACATAATTTA--CTCCC----................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................C----AAAAATTGGTAAGTC------CGCAG......................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................TGAGTAGGTGT-----T---------TG-CC--TTATACA.......................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........T---------TATTAAG-AAGTGGTGTTTA....................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GACAAGCAACAGTGCAAA-----AGTAGTGC...................................................................................2612.0020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................TTGGTAAGTC------CGCAGCAAAGA-...............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000
.............................................................................................................ATA--CTTAC----AT----TGATACTTAT---GT-------...................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000
..............................................................................................................TA--CTTAC----AT----TGATACTTAT---GA-------...................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATTGGTAAGTC------CGCAGCAAA..................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
....AAAGT---------TATTAAG-AAGTGGTGTT......................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.....................................................................................................................................................................................................................................................................................................GCAAA-----AGTAGTGCTGGAAAGTGT-CCTC....................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGAA--------------------G--GCACGCAGACAACCTTG-GAC.......................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AAAATTGGTAAGTC------CGCAGCA....................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000
..........................................ATTTA--CTCCC----AAAAATTGGTA.....................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------C................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................TGACCCACATA--CTTAC----AT----TGAT.....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAAGCAACAGTGCAAA-----AGTAGTGC...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AAAT------C---------------------CTTA-----ATGTCTATT----------TTA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AGTAGTGCTGGAAAGTGT-CCTCG-AA................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATGTATG----T-ATATGAGTAGGTGT-----...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CAAA-----AGTAGTGCTGGAAAGTGT-CCTC....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AAAAATTGGTAAGTC------CGCAGC.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GCTGGAAAGTGT-CCTCG-A.................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AT---GA-------ATGCATGTATG----T-ATATG.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACCTTG-GACTCTCAC-----ACACGT......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................TTA--CTCCC----AAAAATTGGTAAG...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................AAAGA-AA-A-TAAAGTGACCCAC.............................................................................................................................................................................................................................................................................................2111.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CAGACAACCTTG-GACTCTCAC-----ACACG.......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TGACAAGCAACAGTGCAAA-----AGTAGTGC...................................................................................2711.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................AAAGTGACCCACATA--CTTAC----A..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCAATGACAAGCAACAGTGCAAA-----AGTAG......................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AAAAATTGGTAAGTC------CGCAG......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TATG----T-ATATGAGTAGGTGT-----T---------T....................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AA--------------------G--GCACGCAGACAACCTTG-G.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TAAGTC------CGCAGCAAAGA-AA-A-T.........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................................AAATTGGTAAGTC------CGCAGCA....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................AC----AT----TGATACTTAT---GA-------ATGCAT.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..ATAAAGT---------TATTAAG-AAGTGG..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................TACATGAA--------------------G--GCACGCAGACAACCTTG-G.........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................AAAATTGGTAAGTC------CGCAGCAAAG.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............................................................................................................................................................................................................................................................TTG-GACTCTCAC-----ACACGTCAATGACAAGC...........................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAG-AAGTGGTGTTTACATAATTTA--CT.......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................C-----ACACGTCAATGACAAGCAACAGTGATC.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AT----TGATACTTAT---GA-------ATGCATG............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AAA-----AGTAGTGCTGGAAAGTG..........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................AAG-AAGTGGTGTTTACATAATTTA--CTC......................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATAAAGT---------TATTAAG-AAGTGGTGT.......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................C--TTATACATGAA--------------------G--GCACGCAG....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGTGT-CCTCG-AAAAT------C---------------------CTTA-----ATGTC...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....AAGT---------TATTAAG-AAGTGGTGTTT.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................................................ATTGGTAAGTC------CGCAGCAAAG.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................CACGCAGACAACCTTG-GACTC.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................CTCG-AAAAT------C---------------------CTTA-----ATGTC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCAAA-----AGTAGTGCTGGAAAGTGT-C.......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................TA--CTCCC----AAAAATTGGTAAGT..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCAAA-----AGTAGTGCTGGAAAGTGT-CCTC....................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AATAAAGT---------TATTAAG-AAGTGG..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGATACTTAT---GA-------ATGCATGT...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................CGCAGACAACCTTG-GACTCTCAC-----ACACG.......................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCAAA-----AGTAGTGCTGGAAAGTGT-CCT.....................................................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TGACAAGCAACAGTGCAAA-----AGTAGTG....................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTGCTGGAAAGTGT-CCTCG-A.................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTG-GACTCTCAC-----ACACGTCAATGACAA.............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CACGTCAATGACAAGCAACAGTGC...................................................................................................2411.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAAG-AAGTGGTGTTTACATAAT..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GATACTTAT---GA-------ATGCATG............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGTGCAAA-----AGTAGTGCTGGAAAG............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................T----TGATACTTAT---GA-------ATGCATGT...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TACATGAA--------------------G--GCACGCAGACAACCTTG-GATC......................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AAAAATTGGTAAGTC------CGCA.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................CAGACAACCTTG-GACTCTCAC-----............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................A-A-TAAAGTGACCCACATA--CTTAC----...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CACGTCAATGACAAGCAACAGTGCAAA-----...........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATGTATG----T-ATATGAGTAG........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CAACCTTG-GACTCTCAC-----ACACGTCAAT..................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GTGCAAA-----AGTAGTGCTGGAAAGTGT-C.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CAAA-----AGTAGTGCTGGAAAGTGT-........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TATTAAG-AAGTGGTGTTTAC...................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................TTGGTAAGTC------CGCAGCAAAG.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................TAC----AT----TGATACTTAT---GA-------ATGCA..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
................................TGTTTACATAATTTA--CTCCC----A...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................AGTGCTGGAAAGTGT-CCTCG-..................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TATGAGTAGGTGT-----T---------TG-CC--T.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAATAAAGT---------TATTAAC-AAGTGGTGTTTGCATAATTTA--CTCCT----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----ATATATTAATAC-------TC-------ATGTATGTATG----T-ATATGGGTTGGTGT-----T---------GG-TC--TCATACATGCA--------------------G--ACACGCAGACAACCTTG-GACTCTCACACTA---CCGTCAATGACAAGCAACAGTGCAAA-----AGTAGTGCTGGAAAGTGT-CCTCG-AAAAT------C---------------------CTTA-----ACGTAACTT----------AAAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................TATGTATG----T-ATATGGGTTGG.......................................................................................................................................................................................................................2012.0020000110
.........................................................................................................................................................GTATGTATG----T-ATATGGGTTGG.......................................................................................................................................................................................................................2112.0020000020
..ATAAAGT---------TATTAAC-AAGTGGT.........................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......GT---------TATTAAC-AAGTGGTGTTTGC...................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.......................................ATAATTTA--CTCCT----AAAAACTGT.......................................................................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................GCAACAGTGCAAA-----AGTAGT.....................................................................................1911.0010000010
...................ATTAAC-AAGTGGTGTTTGCAT.................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................................................CCT----AAAAACTGGTAAGTC------CGC........................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................................................................TATGTATG----T-ATATGGGTTGGTGC-----...............................................................................................................................................................................................................2311.0010100000
....................................................................................AAAAGA-AA-A-TAAAGTGACCCA..............................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................................AGTGACCCACATA--CTTAC----AT.............................................................................................................................................................................................................................................................................2011.0010001000
...................................................................................................................................................................................................................................................................................................GTGCAAA-----AGTAGTGCTGGAAAGT...........................................................................2311.0010000010
.......GT---------TATTAAC-AAGTGGTGTTTG....................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
droYak3
CAATAAAGT---------TATAAAC-AAGTGGTGTTTGCATAATTTA--CTCCC----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TAATACTCAT---GT-------ATGTACATATG----T-ATATGGGTTGGTGT-----T---------TG-TC--TCATACATG-A--------------------G--GCACGCAGACAACCTTG-GACTCTCACACTA---CCGTCAATGACAAGCAACAGTGCAAA-----AATAGTGCTGGAAAGTGT-CTTTG-AAAAT------C---------------------CTTA-----ACGTAATTT----------ATAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................T----TAATACTCAT---GT-------ATGTACATATG----T-..................................................................................................................................................................................................................................2511.00101000000000
droEug1
AAATACAAT---------TTTTGAA-GTGTGGTGTTTGCATAATTTA--CATCA----AAAAACTGGTAAGTT------CGCAGAAAAAG-AA-AAT-AAATGACCCACATA--CTTAC----AT----TCGTACG------------------------------T-ATGTGCGGCGGTGA----------------A-TC--TCATACATATA--------------------G--GCACGCACACCGCCTTG-GACTTGCACACT----ACGTCA----CGAGCAACAGTGTTGA-----TACAGTGTTGAAAAATGA-CCTCG-GGAAA------C---------------------CTAA-----A---AATTT----------TGAAASizeHit CountTotal NormTotal
No Reads
droBia1
CATTAGTGG---------TTTTAGC-GAGTGATGTTTGCATAATTTA--CACCT----AAAAACTGGTAAGTC------CGAAGAAAAGA-AA-A-TAAAGTGACCCACATA--CTTAC----AT----TTGTACG------------------------------T-ATGTGCGGC----T-----G---------TG-TC--CCATACATATA--------------------G--GCACGCACACAACCTTG-GCCTCGCACACT----GCGTCACCGAAGAGCAACAGTGTTAA-----AACAGTGCTGGAAGGTGC-CCCCA-GAAAT------T---------------------CTAG-----A--TAATTT----------AAAAASizeHit CountTotal NormTotal
No Reads
droTak1
CAACAAAGT---------T--TAA--GCGAGGTGTTTGCATAATTTA--CATCT----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAATGACCCACATA--CTTAC----AT----TTGTACA------------------------------T-ATGTGTGGCGGTGT-----G---------CG-CC--TCATACATATA--------------------G--GCACGCACACAACCTTG-GCCTCGCAC-----CTACGTCACCGACGAGCAACAGTGTTGA----GACCAGTACTGGGAAATGC-CCTCG-GAAAT------C---------------------CTTA-----CCAAATTTT----------GAAAASizeHit CountTotal NormTotal
No Reads
droEle1
CATTAAAGT---------TGTTAAC-AAGTGGTGTTTGCATAATTTA--CATCG----AAAAACTGGTAAGTC------CGCAGAAAAGAAAA-A-TAAAATGACCCACATC-ACACACTCGCAT----TT-----------GC-------AAGTATGTATG----TTATGTGCGGCGGTGT-----G---------TG-TC--TCGTACATAAA--------------------G--GCACGCACACAACCTTG-GACTCACACACT----ACGTCACCGACGAGCAACAGTGTTGA-----GTTAGTGCTGGAAAATGT-CCTCG-GAAAT------C---------------------CTAA-----ACATAATTT----------TGAAASizeHit CountTotal NormTotal
No Reads
droRho1
CCTTAAAGT---------TTTTAAC-AAGTGGTGTTTGCATAATTTA--CATC-----AAAAACTGGTAAGTC------CGCAGAAAAGA-AA-A-TAAAATGACCCACATC--CACACTTACAT----TT-----------GC-------AAGTAGGTATG----TTATGTGCGGCGGTGT-----G---------TG-TC--TCATACATAAA--------------------G--TCACGCACACAACCTTG-GACTCGCACACT----ACGTCACCGACGAGCAACAGTGTTGA-----AGCAGTGCTGGAAAATGT-GCTCG-GAAAT------C---------------------CTTA-----ACATAATTTT---------GAAAASizeHit CountTotal NormTotal
No Reads
droFic1
GTTTAAACT---------TTCAAAA-GAGTAGTGTTTGCATAATTTA--CAGCAAAAAAAAAACTGGTAAGTA------CGAAGAAAAGAAAA-A-TAAAATGACCCACATC--CATACTTACAT----TTGT----------------------ACGTATG----T-TGGTGCGTCGGTGT-----A---------TG-TC--TCATGCACTTA--------------------G--GCACGCACACAACGTTG-TAATCGCAC-----ATACGTCAGCGACAAGCAACAGTGTAAA-----AACAGTGCTGGAAAATAT-CCT-----AAG------C---------------------CTTA-----ACAAAATTT----------GAAAASizeHit CountTotal NormTotal
No Reads
droKik1
CCA-AACGT---------TATGAAA-TAGTGCCGTTTGTGAAATTAA--AAACTG-AAAGAAACTGGTAAGTC------CGTAGAAC-----AAT-AAAAATGACCCACATA--CAAACGTACAT----TTGCAT-------GATTT------G------------C-GGTTGTGT----GC-----G---------TG-TCCCTAATACATATT--------------------C--GCACGCATACAGCCTTG-GACTTGCAC-----ATACGTCACCGACGAGCAACAGTGTTAA-----AACAGTGCTGGAAAATGC-GTGCG-GAAATCTTAAGTTTCAAGTTGTCTGTTCGTAATTTTA-----ATAAA--------------ATTAASizeHit CountTotal NormTotal
No Reads
droAna3
CGTCAATGT---------CCTTAA--AAGTGGTGTTTGCATAATTTT--CCCA---ACAAAAACAGGTAAGTT------CTCAGAA-----CA-A-TAAAGTGGCCCACATC--CATAC----GT----ATATTCTTGC---GT-------ATGTTTGTATG--------------------------------------CC--CCTTGC----A--------------------G--CTTCACACACACTTTTG-TA---AGACACT----ACGTCACCGACGAGCAACAGTGCTAA-----AACAGTGTTGTAAAGTAT-CCTTG-GAAAT------C---------------------ATTG-----AATTAATTTAAAATATATTTAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................TCAGAA-----CA-A-TAAAGTGGCCCA..............................................................................................................................................................................................................................................................................................2111.001100000
....................................................A---ACAAAAACAGGTAAGTT------CTC........................................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
CGTTAAGGT---------CCTTAA--AAGTGTTGTTTGCATAATTTA--TCCA---ACAAAAACAGGTAAGTC------CGCAGAA-----CA-A-TAAAGTGACCCACATC--CATAC----GT----ATATTCTTTC---GT-------ATGTTTGTATG----T-A-----------GT-----A---------TG-CC--CCTTGCA------------------------GCTTCACGCACACTTTTATA------AAATACT----ACGTCACCGACGAGCAACAGTGCTAA-----AACAGTGCTGTATAATAT-TCTCG-GAAAT------C---------------------CTTA-----AATTAATTTTA--------AATAASizeHit CountTotal NormTotal
No Reads
dp5
TACTAGTGC---------GTTTCACAAAGTGGCGTTTGCATAATTAA--TGCAT----ATAAACTGGTAAGTCATACACCGTAGAA-----CA-A-TAAAATGACCCATATATGCGTTCTTACAT----CTGTATA---AGA--CATGTGTATGCATGCAAGTTTCC-TTGTGTGCAAGTGT-----T---------CGGCC--ATATATATGTT--------------------T--TTACACACACAACTATACGTC--CCATACTACATACGTCACCGACGCGCAACAGTGTAAA-----AACAGTGCTATAAAATGTGTTTCGTAAAAA------A---------------------CTGA-----ATTTTTTTT----------ATCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................ACCGACGCGCAACAGTGTAAA-----...........................................................................................2111.0010100000000
.......................ACAAAGTGGCGTTTGCATAAT..............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................AGTTTCC-TTGTGTGCAAGTGT-----T---------CGGCC--..............................................................................................................................................................................................2711.0010100000000
............................................................................CACCGTAGAA-----CA-A-TAAAATG...................................................................................................................................................................................................................................................................................................2011.0010100000000
...TAGTGC---------GTTTCACAAAGTGGC.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
droPer2
TACTAGTGC---------GTTTCACAAAGTGGCGTTTGCATAATTAA--TGCAT----ATAAACTGGTAAGTCATACACCGTAGAA-----CA-A-TAAAATGACCCATATATCCGTTCTTACAT----CTGTATA---AGA--CATGTGTATGCATGCAAGTTTCC-TTGTGTGCAAGTGT-----T---------CGGCC--ATATATATGTT--------------------T--TTACACACACAACTATACGTC--CCATACTACATACGTCACCGACGCGCAACAGTGTAAA-----AACAGTGCTATAAAATGTGTTTCGTAAAAA------A---------------------CTGA-----ATTTTTTTT----------ATCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................TCATACACCGTAGAA-----CA-A-TAA.......................................................................................................................................................................................................................................................................................................2111.001100000
.......GC---------GTTTCACAAAGTGGCGTTTGCAT.................................................................................................................................................................................................................................................................................................................................................................2511.001010000
droWil2
AAGTATTTGATTAAATGACATTG---AAACGAAGTTTGCATAATTGTTAAACGT----GAAATCTGGTAAGTCA-----TGCAAGCAAGAACA-A-TAAAATGACCCATATC--CATAC----AT----ATGTACATAT---GC-------ACATACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGCACACACATTGCCA-GTAATAAAA-----ATACGTCACTGTGTGTGGATAGTGTGAA-----A--AGTGTTGGAAAGTGT-TTTCA-AAATA------T---------------------ATG---------AAAT-------------TCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................TACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GC..........................................................................................................................................................2113.00300003
......TTGATTAAATGACATTG---AAAC............................................................................................................................................................................................................................................................................................................................................................................2112.00201100
......................................................................................................................................................................................................................................................................AAA-----ATACGTCACTGTGTGTGG..........................................................................................................2112.00200011
................................................................................................................................................................................................................................................................................................ATAGTGTGAA-----A--AGTGTTGGA...............................................................................2011.00101000
.....................................................................................................................................................................................................................................................................AAAA-----ATACGTCACTGTGTGTG...........................................................................................................2111.00101000
............................................................................................................................................................CGTATG----T-GCGTGTG--------------------------------------AT--------------------G--G...........................................................................................................................................................1811.00100001
................................................AAACGT----GAAATCTGGTAAGTC.................................................................................................................................................................................................................................................................................................................................2111.00100100
............................................................................................................................................................CGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGC........................................................................................................................................................2111.00101000
................................................................................................................................................................................................................................................................................................ATAGTGTGAA-----A--AGTGTTGG................................................................................1911.00100100
.......................................................................................................................................................................................................................................................................................................GAA-----A--AGTGTTGGAAAGTGT-TT......................................................................2111.00101000
.........ATTAAATGACATTG---AAACGAAG........................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................TACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCG.........................................................................................................................................................2211.00100001
...........................................................................................................................................................ACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--G...........................................................................................................................................................1911.00100010
.........................................................................................................................................................ATACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--............................................................................................................................................................2011.00100001
.....TTTGATTAAATGACATTG---AAA.............................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.............................................GTTAAACGT----GAAATCTGGTAA....................................................................................................................................................................................................................................................................................................................................2111.00101000
.............AATGACATTG---AAACGAAGTTT.....................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................TTGTTAAACGT----GAAATCTGGT......................................................................................................................................................................................................................................................................................................................................2111.00100010
...........................................................................................................................................................................TGTG--------------------------------------AT--------------------G--GCGCACACACATTG..............................................................................................................................................2111.00101000
............................ACGAAGTTTGCATAATTGTTA.........................................................................................................................................................................................................................................................................................................................................................2111.00100010
.............................................................................................................................................................GTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGCA.......................................................................................................................................................2111.00100001
............................................................................................A-A-TAAAATGACCCATATC--CAT.....................................................................................................................................................................................................................................................................................2111.00101000
.......................................................................................................................................................................................................................................................................................TGTGTGTGGATAGTGTGAA-----...........................................................................................1911.00100001
............................................TGTTAAACGT----GAAATCTGGTA.....................................................................................................................................................................................................................................................................................................................................2111.00101000
...........TAAATGACATTG---AAACGAAGT.......................................................................................................................................................................................................................................................................................................................................................................2111.00100001
..................................TTTGCATAATTGTTAAACGT----G...............................................................................................................................................................................................................................................................................................................................................2111.00101000
.........................................................................................................................................................ATACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGCACA.....................................................................................................................................................2711.00100010
..........................................ATTGTTAAACGT----GAAATCTGG.......................................................................................................................................................................................................................................................................................................................................2111.00101000
..............ATGACATTG---AAACGAAGTTTG....................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...........................................................................................................................................................ACGTATG----T-GCGTGTG--------------------------------------AT--------------------G--GCGT........................................................................................................................................................2211.00101000
droVir3
-----------------------------------------------------------AAAATTGGTAAGTC------TATAGAAC----AA-A-TAAAATGACCCACATA--CATAC----AT----GCATAAAAAT---AC-------ATGTACAT---------------------GAATATTGTGCATGTATTG-AC--ATACACATA-CGAGGTGACTGCATTCTTGCCG--------------CTCCA-CAATTATTTGTT----AAATT------------CCGGACACAACTA-A--TTTGTTTTAAA--AT-TCTTA-AAAAT------T---------------------CTATCCTTAACATACGTA----------TGCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................TGACTGCATTCTTGCCG--------------CTCC............................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................ATACACATA-CGAGGTGACTGC........................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................TA-CGAGGTGACTGCATTCTTG.................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................ATTTGTT----AAATT------------CCGGACACA................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................CGAGGTGACTGCATTCTTGC................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................TGCCG--------------CTCCA-CAATTATTTGTC----..........................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TTTGTT----AAATT------------CCGGACACA................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CA-CAATTATTTGTT----AAATT------------CCGG.....................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................CGAGGTGACTGCATTCTTGCC...............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000

Generated: 05/18/2015 at 11:44 AM