ID:

dsi_13263

 Coordinate:

2r:3448992-3449141 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.5 -7.5

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TGTCGTGCGTGATTCTAAATTTTATAAAGTTTATTAAAACATTTTTAAATGTTTTATGCATGTATTTTGTGTATATTGAAGTTAGTTTGCTAGTTACTTCGTGTAAAATCGATAGTTATACATTGGGATTTTGACAAAATGATGTGTAATATATGAACAAAAATCAAACTGTGTGAATTTTCATTGTGATTTGATTTCAGTGAGGTCCAGCCTCTTAACGCTGCGCCACGCCCCTTTTTGCAATGGGTAT
*****************************************************************************************************..............(((((((....((((((.........((.....)).........))))))....)))))))..************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M024
male body		 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR902009
testis
 O001
Testis
 SRR902008
ovaries
.....................................................................................................TGTAAAATCGATAGTTATACATTGGGA.......................................................................................................................... 27 0 1 8.00 8 5 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGGGATTTTGACAAAATGATGTGTAA..................................................................................................... 26 0 1 6.00 6 5 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTGCTAGTTACTTCGTGTAAAATCGA.......................................................................................................................................... 26 0 1 5.00 5 4 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGGGATTTTGACAAAATGATGTGTAA..................................................................................................... 27 0 1 4.00 4 1 2 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................ATATGAACAAAAATCAAACTGTGTGAAT........................................................................ 28 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0 0
................................................................TTTTGTGTATATTGAAGTTAGTTTGCT............................................................................................................................................................... 27 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGCTAGTTACTTCGTGTAAAATCGA.......................................................................................................................................... 25 0 1 3.00 3 1 1 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................TATGAACAAAAATCAAACTGTGTGAATT....................................................................... 28 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGATGTGTAATATATGAACAAAAA....................................................................................... 24 0 1 3.00 3 2 0 0 0 0 0 0 1 0 0 0 0 0
........................................................................................................................CATTGGGATTTTGACAAAATGATGTGTAA..................................................................................................... 29 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAACTGTGTGAATTTTCATT................................................................. 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................................CATTGGGATTTTGACAAAATGATGTG........................................................................................................ 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................TAGTTTGCTAGTTACTTCGTGTAAAA.............................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGATGTGTAATATATGAACAAAAATC..................................................................................... 26 0 1 2.00 2 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................AACTGTGTGAATTTTCATTGT............................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0
................................................................................................................TAGTTATACATTGGGATTTTGACAAAA............................................................................................................... 27 0 1 2.00 2 0 1 0 0 0 0 0 0 0 0 1 0 0
.....................................................................................................................ATACATTGGGATTTTGACA.................................................................................................................. 19 0 1 2.00 2 0 0 0 0 1 0 0 0 0 1 0 0 0
...........................................................................................................................TGGGATTTTGACAAAATGATGTGTA...................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................ATCAAACTGTGTGAATTTTCATT................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................CATTGGGATTTTGACAAAATG............................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GATAGTTATACATTGGGATTTTGAC................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGATGTGTAATATATGAACAAAA........................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATTGGGATTTTGACAAAATGATGTGT....................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
....................................................................................................................TATACATTGGGATTTTGACA.................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TCATTGTGATTTGATTTCAGT................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.......................................................................................TGCTAGCTACTTCGTGTAA................................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................TTCATTGTGATTTGATTTC.................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................TAGTTACTTCGTGTAAAATCGATAGT...................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGATTTCAGTGAGGTCC.......................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGGGATTTTGACAAAATGATGTG........................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AATCAAACTGTGTGAATTTTCATT................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATACATTGGGATTTTGACAA................................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TGATTTGATTTCAGTGAGGTCC.......................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TTGTGATTTGATTTCAGTGAGGTCCAGC....................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................TTTGTGTATATTGAAGTTAGTTTGC................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................GATAGTTATACATTGGGATTTTGACAAAA............................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCAGTGAGGTCCAGCCTCTTAACGCTG........................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................GTATATTGAAGTTGGTTTGCTA.............................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATTGGGATTTTGACAAAATGATGC......................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCGATAGTTATACATTGGGATTTTGACAA................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TCAAACTGTGTGAATTTTCATT................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....TGCGTGATTCTAAATTTTATAAAGTT........................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................GACTTCGTGTAAAATCGATAGT...................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................TTGTGTATATTGAAGTTAGTTTGCT............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATACATTGGGATTTTGACAAA................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................TTGACAAAATGATGTGTAATATATGAACA........................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATTGGGATTTTGACAAAATGAT........................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TGAACAAAAATCAAACTGTGTGAATT....................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................ATTTTGACAAAATGATGTGT....................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AAAAATCAAACTGTGTGAATT....................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................TCGATAGTTATACATTGGGATTTTGACA.................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ATTTGATTTCAGTGAGGTC........................................... 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................ATATATGAACAAAAATCAAACTGG.............................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GATTTGATTTCAGTGATGTCC.......................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
..................................................................................................................................TTGACAAAATGATGTGTAATATATGAAC............................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AATCAAACTGTGTGAATTTTCATTGT............................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AACTGTGTGAATTTTCATT................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................TTATACATTGGGATTTTGACA.................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................TGCTAGTTACTTCGTGTAAAATCGAT......................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................AACTGTGTGAATTTTCATTGG............................................................... 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................GTGTAAAATCGATAGTTATACATTGGGA.......................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGGGATTTTGACAAAATGATGTGTA...................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0
...........................................................................................................................................TGATGTGTAATATATGAACAAAAAAAAAAA................................................................................. 30 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................TGGGATTTTGACAAAATGATGTGTAATATA................................................................................................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGATGTGTAATATATGAAAAAAAA....................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATATGAACAAAAATCAAACTGTGTGAATT....................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TATATGAACAAAAATCAAACTGTGTGA.......................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGATTTTGACAAAATGATGTGTAATATA................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................ATGATGTGTAATATATGAACAAAAATC..................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................ATATTGAAGTTAGTTTGCTAGTTACT........................................................................................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAAACTGTGTGAATTTTCATTGT............................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................GTAATATATGAACAAAAATCAAACTGTG............................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................TTGCTAGTTACTTCGTGTAAAATCGATA........................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGGGATTTTGACAAAATGATG.......................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TACATTGGGATTTTGACAAAATGATG.......................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................ATTTTGACAAAATGATGTGTAAT.................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................ATACATTAGGATTTTGACAAA................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................TGGGATTTTGACAAAATGATGTGT....................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAAAATCGATAGTTATACATTGGGA.......................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................GTTTGCTAGTTACTTCGTGTA................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................TAGTTATACATTGGGATTTTGACAAA................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1
................................................................TTTTGTGTATATTGAAGTTAGTT................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ATCGATAGTTGTACATTGGGA.......................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGGGATTTTGACAAAATGATGTG........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................ATTGGGATTTTGACAAAATGATGTG........................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAAACTGTGTGAATTTTCATTGTGATTT.......................................................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................CATTGGGATTTTGACAAAA............................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTTGACAAAATGATGTGTAATATATG............................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................GATAGTTATACATTGGGATTTTGACAA................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCAGTGAGGTCCAGCCTCTTAACGC............................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.................................................................................................TTCGTGTAAAATCGATAGTTATACAT............................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................ATTGGGATTTTGACAAAATGATGT......................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TTGGGATTTTGACAAAATGATGTGTAATA................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAAAATCGATAGTTA.................................................................................................................................... 15 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................GATTTGAGTGAGGTC........................................... 15 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................ATTTTGTGGATATTGA........................................................................................................................................................................... 16 1 14 0.07 1 0 0 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................TGGCAAAATGATGTG........................................................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................TTAAACGGTGTGAATTTTG.................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

ACAGCACGCACTAAGATTTAAAATATTTCAAATAATTTTGTAAAAATTTACAAAATACGTACATAAAACACATATAACTTCAATCAAACGATCAATGAAGCACATTTTAGCTATCAATATGTAACCCTAAAACTGTTTTACTACACATTATATACTTGTTTTTAGTTTGACACACTTAAAAGTAACACTAAACTAAAGTCACTCCAGGTCGGAGAATTGCGACGCGGTGCGGGGAAAAACGTTACCCATA
************************************************************************..............(((((((....((((((.........((.....)).........))))))....)))))))..***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 O002
Head
 SRR902009
testis
...............................................................................................................................................................................................................GTCGGAGAATTGCGACGCGGT...................... 21 0 1 4.00 4 3 1 0 0 0 0
............................................................................................................................................CTCCAGATTATAGACTTGTT.......................................................................................... 20 3 3 1.33 4 0 0 4 0 0 0
................................................................AAAACACATATAACTTCAATCAAACGAT.............................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 1
..........................................................................................................................................................................................................................GCGACGCGGTGCGGGGAAA............. 19 0 1 1.00 1 0 0 0 1 0 0
......................................................................................................................................................................................................TCACTCCAGGTCGGAGAATTGC.............................. 22 0 1 1.00 1 0 1 0 0 0 0
....................................................................................CAAACGATCAATGAAGCACAT................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................................TTAAATCTCAATATGTAACC............................................................................................................................ 20 3 8 0.13 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................CGACGCGGTGCGGGGC............... 16 1 9 0.11 1 0 0 0 1 0 0
........................................................................................................................................................................................................................TAGCGACGCGGTGAGGCGA............... 19 3 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3448942-3449191 + dsi_13263 TG-----TCGTGCGTGAT-TCTAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTGATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------CTCTTAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
droSec2 scaffold_1:250866-251115 + TG-----TCGTGCGTGAT-TCTAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTCGCCAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTAATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------CTCGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
dm3 chr2R:2586365-2586615 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTTAT-TGAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTGATTCGATTT-CAGTGA-GG-TC-CAG-C----------------------TTCGCAACGCT--GCGCCACGCCCCCTT-TTGCAATGGGTA--T
droEre2 scaffold_4929:19958872-19959122 - TG-----TCGTGCGTGATTTCCAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGGTAGTTAC-TTCGTG--TAAA-ACCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATAAA-----------------CAA---AAAT-------GAAAC--TGTGTGAATTT---TCATTGTGATTCGATTT-CAGTGA-GG-TT-CAG-C----------------------CCCACAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
droYak3 2L:15329722-15329972 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATTCGTGTG-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TACA-ATCG---------ATAGATA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATAAA-----------------CAT---AAAT-------AAAAC--TGTGTGAATTT---TCATTGTGATTCAATTT-CAGTGA-GG-TT-TAG-C----------------------CCCACAACGCT--GAGCCACGCCCCATT-TTGCAAAGGGTA--T
droEug1 scf7180000409462:3457358-3457610 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTGAT-CGAAACATTT--A--------TTAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGACCG---------ATAGTTA----TACAT---TGGGATCTT----------AACAAAATGATGTGTAATATATAAA-----------------CCA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------TCCGACATGCT--GCGTCACGCCCCTTTCTTGCAATGGGTA--T
droBia1 scf7180000302292:3565525-3565776 - TG-----TCGTGTGTGATTTCTAA-ATTTTATAATGTTCAT-TGAAACAGTT--A--------TAAATAT------------------T--TTGTGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAAGACGG---------ATAGTTA----TACAT---TGGGATATT----------GACAAAATGATGTGTAATATATAAA-----------------CCG---AACT-------CAAAC--TGTGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-CT-AAA-C----------------------CCAGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
droTak1 scf7180000413887:15575-15826 - TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTTAT-TGAAACATTG--A--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTTGTG--TAAGGACCG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATAATGTGTAATATATAAA-----------------CAA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCTGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
droEle1 scf7180000491217:426846-427097 - TG-----TCGTGCGTGATTTCCAA-ATTTTATAAACTTTAT-CGAAACATTT--A--------TAAATGT------------------T--TC-TGCATGTA-TTTTGTGT---ATATTAAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGAACG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATAATGTGTAATATATAA------------------CAA-AGAAGT-------TAAAC--TATGTGAATTT---TTATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCCGAAATGCT--GCGCCACGCCCCTTT-TTGCAACGGGTA--T
droRho1 scf7180000766409:473796-474046 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAT-CGAAACATTT--A--------TTAATGT------------------T--TT-TGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGATCG---------ATAGTTA----TACAT---TGGGATCTT----------AGCAAAATAATGTGTAATATATAAA-----------------CCA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCTGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--T
droFic1 scf7180000453955:714957-715214 - TGTGTCGTCGTGCGTGATTTCTAA-ATTTTATAAAATTTAT-TGAAACATTT--G--------TAAATGT------------------T--TTATGCATGTA-TTTTGTTT---ATATTGAAGTTAGTTTGCTAGTTAT-TTCGTG--TGAAGACCG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATGATGTGTAATATATAAA-----------------CTA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGGAGG-TC-CAG-C----------------------CCCGCATCGCT--GCGCCACGCCCCTTT-TTGCAACGGGTA--T
droKik1 scf7180000302470:149030-149254 + TG-----TTGTGCGTGATTTCTAA-ATTTTACAAACCCTAT-CGAGTCATAT--A--------TAACAGT------------------T--TTATGTATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTTGTG--CAAAGACCG---------TTGGTTACATGTACAC---TGGGATCTT----------GACAAAATGATGTGTAATATATAAA-----------------CAA---TACT-------TGAAA--TATGTGAATTT---TCATTGTGATTTGTTTT-CAATGC-----------------------------------------------------------TGC-TTACGTTGGGTA--T
droAna3 scaffold_13266:18422867-18423122 - TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTCTAC-CAGGACATAT--G--------TAAGCGT------------------T--TTATGTATGTA-TTTTGTGT---GTATTGCGATTAGGTTGCTAGTTAC-TTTGTT--CGAAGACCG---------ATAGTTT----TACAC---TAGGATCTT----------GACGGAATAATGTTTAATATAAAAA-----------------CCA---AACT-------T-AAC--CATGTGAATTT---TCAATGTGATTCGTTTT-CAGTGA-GG-CCTCAG-CC----------------TCAGC----CTCCGCCGAGCGCCACGCCCCGTT-TTTCACCGGGTA--T
droBip1 scf7180000396735:1694996-1695258 - TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTCCAT-CAGGACATAT--G--------TATGCGT------------------T--TTATGTATGTA-TTTTGTGT---ATATTGCGATTAGGTTGCTAGTTAC-TTTGTT--CAAAGACCG---------ATAGTTT----TACAC---TAGGATCTT----------GACGAAATAATGTTTAATACAAAAA-----------------CCA---AACT-------T-AAC--CATGTGAATTT---TCAATGTGATTCGTTTT-CAGTGA-GG-CCTCAG-CCGAACAGGC---AA--------GCAGCAGTTCA--GCGCCACGCCCCGTT-TTTCACTGGGCA--T
dp5 3:850548-850845 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAA-CGAGACACAT--ATGTATACCTAAATGT------------------TTTTTATGTATATT-TTTTGTGTACTATATTAAAATTAGTTTGCAAGTTATCTTTGTG--TAAGGACAGATCAGACGCATAGTTA----TACACCGGTGGGGTCTAGGTCGTGCCGGACAAAATTCTGTGTAATATATAGA-----------------CA----AACT-------GAAAA--TATGTGAACTTCTCTCATTGTGATTTGTTTT-CAGCGA-GC-CA----------------TCCAGTCGCTGCCCTGCAACGCC--GCGCCACGCCCCATT-TTGCAATGGGTG--T
droPer2 scaffold_2:1026486-1026783 + TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAA-CGAGACACAT--ATGTATACCTAAATGT------------------TTTTTATGTATATT-TTTTGTGTACTATATTAAAATTAGTTTGCAAGTTATCTTTGTG--TAAGGACAGATCAGACGCATAGTTA----TACACCGGTGGGGTCTAGGTCGTGCCGGACAAAATTCTGTGTAATATATAGA-----------------CA----AACT-------GAAAA--TATGTGAAATTCTCTCATTGTGATTTGTTTT-CAGCGA-GC-CA----------------TCCAGTCGCTGCCCTGCAACGCC--GCGCCACGCCCCATT-TTGCAATGGGTG--T
droWil2 scf2_1100000004909:7385749-7385778 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--ATGGCATGGCCGTAT-TTAGTTCGGAAC--T
droVir3 scaffold_12875:15473140-15473392 + TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTTTAAACAAAAAACAT--ACGTATAAAA---------------------AAAA--AAAAACAAATATTTTTGTGT---ACATTT-AGTTAGTTTGCTAGTTAC-ATTTTGGCTGAGCAGTA---------A-------------------------TT----------GATA-AATGGCGTGTAATATATATA-----------------TAA---AATTATGTAAACATAT--TATGTGAACTTGTCTCATTGTGATTCGTTTTACGATGA-AT-AC-GAATCCTAATAACC-------------CCCG-AATCC----CGTCT--CTCCCGT-TCGTGGTG------G
droMoj3 scaffold_6496:8324738-8324995 - TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTTTAA-AC----ATA----CGTATATAT----GAAACAAAAAACAAAACAACA--AAATACAAATATTTTTGTGT---AAATTT-AGTTAGTTCGCTAGTTAC-ATTTTGGCTGAGCAGTA---------A-------------------------TT----------GATG-AATGGCGTGTAAAATACATATACATATATTACATATTCTA--------TATTAACGTACTATATGTGAATTTGTCTCATTGTGATTCGTTTA-----------TC-TAC-C--------CCTCGTTTC---------------T----CCTACCCTCCA---TCGTGGTG------G
droGri2 scaffold_15245:12275208-12275451 + TG-----TCGTACGTGATTTCTAAAATTTTATAAACTTTAA-ACAAAAAATGATACG--------TATAT------------------T--AAATACAAATATTTTTGTGT---ACATTT-AGTTAGTTTGCTAGTTAC-ATTTTGGATGAGTAGCG---------ATGATGA----TG------------------------------AGTGGAGTGTAATATATATA-----------------CTATATAAACATATAAACATAC--TATGTGAATTTCTCTTATTTTGATTCGTTTT-CATGAA-TGAAT-CAA-C----------------------C--ACA----------TCT--CTCCCGT-TAGTGGTGGCTGCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TG-----TCGTGCGTGAT-TCTAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTGATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------CTCTTAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................TG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGA....................................................................................................................................................................................................2718.00800000053000000000
.........................................................................................................................................................................................TGGGATTTT----------GACAAAATGATGTGTAA.....................................................................................................................................................................2616.00600000051000000000
................................................................................................................................TTGCTAGTTAC-TTCGTG--TAAA-ATCG---------A...........................................................................................................................................................................................................................2615.00500000041000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGTGTAA.....................................................................................................................................................................2714.00400000012100000000
..............................................................................................................................................................................................................................ATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAAT...........................................................................................................2813.00300300000000000000
.......................................................................................................TTTTGTGT---ATATTGAAGTTAGTTTGCT.............................................................................................................................................................................................................................................................2713.00300000021000000000
.................................................................................................................................TGCTAGTTAC-TTCGTG--TAAA-ATCG---------A...........................................................................................................................................................................................................................2513.00300000011001000000
...............................................................................................................................................................................................................................TATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATT..........................................................................................................2813.00300000021000000000
...................................................................................................................................................................................................................TGATGTGTAATATATGAA-----------------CAA---AAA...................................................................................................................................2413.00300000020010000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATGTGTAA.....................................................................................................................................................................2912.00200000011000000000
........................................................................................................................................................................................................................................................................AAAC--TGTGTGAATTT---TCATT.................................................................................................2012.00200200000000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................2612.00200000020000000000
............................................................................................................................TAGTTTGCTAGTTAC-TTCGTG--TAAA-A........................................................................................................................................................................................................................................2612.00200000020000000000
...................................................................................................................................................................................................................TGATGTGTAATATATGAA-----------------CAA---AAAT-------C..........................................................................................................................2612.00200000010100000000
.........................................................................................................................................................................................................................................................................AAC--TGTGTGAATTT---TCATTGT...............................................................................................2112.00200200000000000000
.......................................................................................................................................................................TAGTTA----TACAT---TGGGATTTT----------GACAAAA...............................................................................................................................................................................2712.00200000001000001000
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................1912.00200010000000100000
.........................................................................................................................................................................................TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2512.00200000011000000000
..............................................................................................................................................................................................................................................................AT-------CAAAC--TGTGTGAATTT---TCATT.................................................................................................2311.00101000000000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATG.............................................................................................................................................................................2111.00100010000000000000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATTTT----------GAC...................................................................................................................................................................................2511.00100000010000000000
...................................................................................................................................................................................................................TGATGTGTAATATATGAA-----------------CAA---AA....................................................................................................................................2311.00100000010000000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGT.......................................................................................................................................................................2611.00100010000000000000
...........................................................................................................................................................................TA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2011.00100000001000000000
............................................................................................................................................................................................................................................................................................TCATTGTGATTTGATTT-CAGT................................................................................2111.00100000000001000000
........................................................................................................................................................................................................................................................................................T---TCATTGTGATTTGATTT-C...................................................................................1911.00100000000001000000
....................................................................................................................................TAGTTAC-TTCGTG--TAAA-ATCG---------ATAGT.......................................................................................................................................................................................................................2611.00100000010000000000
......................................................................................................................................................................................................................................................................................................TTGATTT-CAGTGA-GG-TC-C......................................................................1811.00101000000000000000
.........................................................................................................................................................................................TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................2311.00100000001000000000
.............................................................................................................................................................................................................................................................AAT-------CAAAC--TGTGTGAATTT---TCATT.................................................................................................2411.00101000000000000000
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2011.00101000000000000000
..................................................................................................................................................................................................................................................................................................TGATTTGATTT-CAGTGA-GG-TC-C......................................................................2211.00100010000000000000
...............................................................................................................................................................................................................................................................................................TTGTGATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------............................................2811.00100000001000000000
........................................................................................................TTTGTGT---ATATTGAAGTTAGTTTGC..............................................................................................................................................................................................................................................................2511.00100010000000000000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAA...............................................................................................................................................................................2911.00100000001000000000
............................................................................................................................................................................................................................................................................................................T-CAGTGA-GG-TC-CAG-C----------------------CTCTTAACGCT--G..............................2711.00101000000000000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGC.........................................................................................................................................................................2411.00100100000000000000
..........................................................................................................................................................TCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2911.00100000001000000000
...............................................................................................................................................................................................................................................................T-------CAAAC--TGTGTGAATTT---TCATT.................................................................................................2211.00101000000000000000
..........TGCGTGAT-TCTAA-ATTTTATAAAGTT............................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.........................................................................................................TTGTGT---ATATTGAAGTTAGTTTGCT.............................................................................................................................................................................................................................................................2511.00100000010000000000
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACAAA................................................................................................................................................................................2111.00110000000000000000
................................................................................................................................................................................................TT----------GACAAAATGATGTGTAATATATGAA-----------------CA..........................................................................................................................................2911.00100000001000000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGAT...........................................................................................................................................................................2211.00101000000000000000
.................................................................................................................................................................................................................................TGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATT..........................................................................................................2611.00100000001000000000
.............................................................................................................................................................................................ATTTT----------GACAAAATGATGTGT.......................................................................................................................................................................2011.00100010000000000000
.......................................................................................................................................................................................................................................................AA---AAAT-------CAAAC--TGTGTGAATT..........................................................................................................2111.00100000010000000000
..........................................................................................................................................................TCG---------ATAGTTA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................ATTTGATTT-CAGTGA-GG-TC-.......................................................................1911.00110000000000000000
............................................................................................................................................................................................................................ATATATGAA-----------------CAA---AAAT-------CAAAC--TGG.................................................................................................................2411.00100100000000000000
................................................................................................................................................................................................TT----------GACAAAATGATGTGTAATATATGAA-----------------C...........................................................................................................................................2811.00100000010000000000
.............................................................................................................................................................................................................................................................AAT-------CAAAC--TGTGTGAATTT---TCATTGT...............................................................................................2611.00100000010000000000
.........................................................................................................................................................................................................................................................................AAC--TGTGTGAATTT---TCATT.................................................................................................1911.00100000000000100000
..........................................................................................................................................................................TTA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2111.00100000001000000000
.................................................................................................................................TGCTAGTTAC-TTCGTG--TAAA-ATCG---------AT..........................................................................................................................................................................................................................2611.00100000000010000000
.........................................................................................................................................................................................................................................................................AAC--TGTGTGAATTT---TCATTGG...............................................................................................2111.00101000000000000000
...............................................................................................................................................GTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGA....................................................................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2611.00100000000000001000
.........................................................................................................................................................................................TGGGATTTT----------GACAAAATGATGTGTAATATA.................................................................................................................................................................3011.00100000001000000000
..............................................................................................................................................................................................................................ATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATT..........................................................................................................2911.00100000001000000000
.............................................................................................................................................................................................................................TATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGA.............................................................................................................2711.00100000001000000000
..................................................................................................................................................................................................................ATGATGTGTAATATATGAA-----------------CAA---AAAT-------C..........................................................................................................................2711.00100000010000000000
..................................................................................................................ATATTGAAGTTAGTTTGCTAGTTAC-T.....................................................................................................................................................................................................................................................2611.00101000000000000000
.......................................................................................................................................................................................................................................................................CAAAC--TGTGTGAATTT---TCATTGT...............................................................................................2311.00101000000000000000
.........................................................................................................................................................................................................................GTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTG................................................................................................................2811.00100000010000000000
................................................................................................................................TTGCTAGTTAC-TTCGTG--TAAA-ATCG---------ATA.........................................................................................................................................................................................................................2811.00100000001000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATG..........................................................................................................................................................................2211.00100000001000000000
.................................................................................................................................................................................TACAT---TGGGATTTT----------GACAAAATGATG..........................................................................................................................................................................2611.00100000000100000000
.............................................................................................................................................................................................ATTTT----------GACAAAATGATGTGTAAT....................................................................................................................................................................2311.00101000000000000000
.........................................................................................................................................................................................TGGGATTTT----------GACAAAATGATGTGT.......................................................................................................................................................................2411.00100000010000000000
....................................................................................................................................................TAAA-ATCG---------ATAGTTA----TACAT---TGGGA....................................................................................................................................................................................................2511.00100000000010000000
..............................................................................................................................GTTTGCTAGTTAC-TTCGTG--TA............................................................................................................................................................................................................................................2111.00100010000000000000
.......................................................................................................................................................................TAGTTA----TACAT---TGGGATTTT----------GACAAA................................................................................................................................................................................2611.00100000000000010000
.......................................................................................................TTTTGTGT---ATATTGAAGTTAGTT.................................................................................................................................................................................................................................................................2311.00100000001000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................2411.00100000010000000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................................................................................................CAAAC--TGTGTGAATTT---TCATTGTGATTT..........................................................................................2811.00100010000000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAA...............................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................................................TTT----------GACAAAATGATGTGTAATATATG...............................................................................................................................................................2611.00100000001000000000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2711.00100100000000000000
...........................................................................................................................................................................................................................................................................................................TT-CAGTGA-GG-TC-CAG-C----------------------CTCTTAACGC..................................2611.00100001000000000000
............................................................................................................................................TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---.........................................................................................................................................................................................................2611.00100000000001000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGTGTAATA...................................................................................................................................................................2911.00100000010000000000
....................................................................................................................................................TAAA-ATCG---------ATAGTTA----.................................................................................................................................................................................................................1530.33100000010000000000
droSec2
TG-----TCGTGCGTGAT-TCTAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTCGCCAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTAATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------CTCGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................GTAATTTGATTT-CAGTGA-GG-T.........................................................................2112.0022000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2412.0020020
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2612.0020110
..........................................................................................................TGTGT---ATATTGAAGTTAGTT.................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGAA...................................................................................................................................................................................................1911.0010100
.....................................................................................................A-TTTTGTGT---ATATTGAAGTTAGT..................................................................................................................................................................................................................................................................2311.0010100
...................................................................................................................................................................................................................................................................................................AATTTGATTT-CAGTGA-GG-TC-.......................................................................2011.0010100
....................................................................................................................................................................................................................................................................................................ATTTGATTT-CAGTGA-GG-TC-CA.....................................................................2111.0010100
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2811.0010100
...................................................................................................................................CCAGTTAC-TTCGTG--TAAA-ATCG---------ATAG........................................................................................................................................................................................................................2611.0010100
.................................................................................................................................................................................TACAT---TGGGATTTT----------GACAAAATGATG..........................................................................................................................................................................2611.0010100
........................................................................................................................................................................................................................................................................................................GATTT-CAGTGA-GG-TC-CAG-C----------------------CTT.........................................2211.0011000
..........................................................................................................................................................................................................................................................................................................................................................CAACGCT--GCGCCACGCCCCTT.................2111.0011000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2611.0010100
.....................................................................................................................................................................................................................ATGTGTAATATATGAA-----------------CAA---A.....................................................................................................................................2011.0010100
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2311.0010100
.................................................................................................................................................................................................................................................................................................GTAATTTGATTT-CAGTGA-GG-TC-CAG-C----------------------CTC.........................................2911.0010100
....................................................................................................................................................................................................................................A-----------------CAA---AAAT-------CAAAC--TGTGTGAA............................................................................................................2111.0010001
..........................................................................................................................GTTAGTTCGCCAGTTAC-TTCGTG--TAAA-.........................................................................................................................................................................................................................................2711.0010010
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATTG.........................................................................................................................................................................2411.0010100
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2711.0010010
...............................................................................................................................................................................................TTT----------GACAAAATGATGTGTAAT....................................................................................................................................................................2111.0010100
...........................................................................................................................TTAGTTCGCCAGTTAC-TTCGT.................................................................................................................................................................................................................................................2111.0010100
.................................................................................................................................................................................................................................................................................................GTAATTTGATTT-CAGTGA-G............................................................................1911.0010010
...................................................................................................................................................................................................................................AA-----------------CAA---AAAT-------CAAAC--TGTGTGA.............................................................................................................2111.0011000
dm3
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTTAT-TGAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAA-ATCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATGAA-----------------CAA---AAAT-------CAAAC--TGTGTGAATTT---TCATTGTGATTCGATTT-CAGTGA-GG-TC-CAG-C----------------------TTCGCAACGCT--GCGCCACGCCCCCTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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...........................................................................................TTATGCATGTA-TTTTGTGT---................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TA----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TTTT----------GACAAAATGATGTGTAATATA.................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTGTGT---ATATTGAAGTTAGTTT................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................C-CAG-C----------------------TTCGCAACGCT--GCGCCACGCCCC...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................TTCGCAACGCT--GCGCCACGCCCCCTT-T..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................TGT------------------T--TTATGCATGTA-TTTTGTG....................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................CGTG--TAAA-ATCG---------ATAGTTA----TAC..............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................T------------------T--TTATGCATGTA-TTTTGTG....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........CGTGCGTGATTTCTAA-ATTTTATAAAGTT............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.....................................................................................................................................................................................T---TGGGATTTT----------GACAAAAT..............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................T-CAGTGA-GG-TC-CAG-C----------------------TTCGCAACGCT--G..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TT-CAGTGA-GG-TC-CAG-C----------------------TTCG........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CGCCACGCCCCCTT-TTGCAATG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................AATGATGTGTAATATATGAA-----------------CAA---AAAT-------C..........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCGATTT-CAGTGA-GG-TC-CAG-C----------------------TTCGCAAC....................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................GCTAGTTAC-TTCGTG--TAAA-A........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................ATGTGTAATATATGAA-----------------CAA---AAAT-------CAA........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CAAAC--TGTGTGAATTT---TCATTT................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AGTTTGCTAGTTAC-TTCGTG--TAAA-A........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TT-CAGTGA-GG-TC-CAG-C----------------------TTCGCAAC....................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TG-----TCGTGCGTGATTTCTAA-ATTTTA...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGAATTT---TCATTGTGATTC..........................................................................................2111.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCGATTT-CAGTGA-GG-TC-CAG-C----------------------TTC.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................TCGCAACGCT--GCGCCACGCCCCCTT-TT.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AA-----------------CAA---AAAT-------CAAAC--TGTGTGA.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GCTAGTTAC-TTCGTG--TAAA-.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................GTGTGAATTT---TCATTGTGATT...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGA-GG-TC-CAG-C----------------------TTCGCAA.....................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AGTTTGCTAGTTAC-TTCG..................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATTTT----------GACAAA................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTT----------GACAAAATGATGTGTAATATATT...............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................CATGTA-TTTTGTGT---ATATTGAAGT......................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTGCTAGTTAC-TTCGTG--TAAA-ATCG---------AT..........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GATGTGTAATATATGAA-----------------CAA---A.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TC-CAG-C----------------------TTCGCAACGCT--GCGC...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................CTAGTTAC-TTCGTG--TAAA-ATCG---------............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................TCG---------ATAGTTA----TACAT---TGGGATTTT----------GAC...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................G--TAAA-ATCG---------ATAGTTA----TA...............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTTTGTGT---ATATTGAAGTTAGTTTGT..............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................TCGTG--TAAA-ATCG---------ATAGTT......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TTTTGTGT---ATATTGAAGTTAGTTT................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TACAT---TGGGATTTT----------GACAAAAT..............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................TCG---------ATAGTTA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................TTCGTG--TAAA-ATCG---------ATA.........................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTTAC-TTCGTG--TAAA-ATCG---------AT..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTAGTTAC-TTCGTG--TAAA-AT.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ATATTGAAGTTAGTTTGCTAT...........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................TTT---TCATTGTGATTCGAT.......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................TTTTGTGT---ATATTGAAGTTAGTTTGA..............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................AC-TTCGTG--TAAA-ATCG---------ATAGC.......................................................................................................................................................................................................................2111.0010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGA-GG-TC-CAG-C----------------------TTCGCAACGCT--GCGC...........................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GATTCGATTT-CAGTGA-GG-TC-C......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATG..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TA----TACAT---TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGT---ATATTGAAGTTAGTTTGCTAG...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTAGTTTGCTAGTTAC-TTCG..................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TAGTTAC-TTCGTG--TAAA-ATCG---------ATA.........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................AAATGATGTGTAATATATGAA-----------------CAA---......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GTGATTCGATTT-CAGTGA-GG-TC-CAG-C----------------------TT..........................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................CGCT--GCGCCACGCCCCCTT-TTGCAAT........2611.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TT---TCATTGTGATTCGATTT-CAGTGA-.............................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGTTA----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCGTGCGTGATTTCTAA-ATTT.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................A-TTTTGTGT---ATATTGAAGTTG....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................T-CAGTGA-GG-TC-CAG-C----------------------TTCG........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
droEre2
TG-----TCGTGCGTGATTTCCAA-ATTTTATAAAGTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGGTAGTTAC-TTCGTG--TAAA-ACCG---------ATAGTTA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATAAA-----------------CAA---AAAT-------GAAAC--TGTGTGAATTT---TCATTGTGATTCGATTT-CAGTGA-GG-TT-CAG-C----------------------CCCACAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................GATTCGATTT-CAGTGA-GG-TT-C......................................................................2112.0020000200
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACAAAAT..............................................................................................................................................................................2312.0020001010
...................................................................................................................................................................................................................................................................................................GATTCGATTT-CAGTGA-GG-TT-.......................................................................2012.0020100100
...................................................................................................................................GTAGTTAC-TTCGTG--TAAA-ACC......................................................................................................................................................................................................................................2112.0020000200
.........................................................................................................TTGTGT---ATATTGAAGTTAGTTTGGT.............................................................................................................................................................................................................................................................2512.0020000200
....................................................................GT------------------T--TTATGCATGTA-TTTTGT.....................................................................................................................................................................................................................................................................................2012.0021000100
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2812.0021000100
.............................................................................................................GT---ATATTGAAGTTAGTTTGGT.............................................................................................................................................................................................................................................................2112.0020000200
................................................................................................................................................................................................................................ATAAA-----------------CAA---AAAT-------GAAAC--TGTGTGAATT..........................................................................................................2711.0011000000
...........................................................................................................................................................................TA----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................2011.0010000010
......................................................................................................................................GTTAC-TTCGTG--TAAA-ACCG---------ATAGT.......................................................................................................................................................................................................................2411.0010000100
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGATT..................................................................................................................................................................................................2011.0011000000
.................................................................AATGT------------------T--TTATGCATGTA-TTTTGTGT---................................................................................................................................................................................................................................................................................2511.0010000100
....................................................................................................................................................................................................................................................................................................ATTCGATTT-CAGTGA-GG-TT-CA.....................................................................2111.0010000100
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGT.......................................................................................................................................................................2611.0010000100
..........................................................................................................TGTGT---ATATTGAAGTTAGTTTGGTA............................................................................................................................................................................................................................................................2511.0010000010
........CGTGCGTGATTTCCAA-ATTTT....................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...............................................................................................................................TTTGGTAGTTAC-TTCGTG--TA............................................................................................................................................................................................................................................2011.0010000100
................................................................................................................................TTGGTAGTTAC-TTCGTG--TAAA-.........................................................................................................................................................................................................................................2111.0010000100
...........................................................................................................................................................................TA----TACAT---TGGGATTTT----------GACAAAAT..............................................................................................................................................................................2411.0010000100
.G-----TCGTGCGTGATTTCCAA-AT.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.........................................................................................................................................................................GTTA----TACAT---TGGGATTTT----------GAC...................................................................................................................................................................................2111.0010000100
................................................................................................................................TTGGTAGTTAC-TTCGTG--TA............................................................................................................................................................................................................................................1911.0010000100
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GAC...................................................................................................................................................................................1811.0011000000
..................................................................................................................ATATTGAAGTTAGTTTGGTAGTTAC-......................................................................................................................................................................................................................................................2511.0010000100
.........................................................................................................................................................................................................................................................................AAC--TGTGTGAATTT---TCATTGT...............................................................................................2111.0010000010
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGAT...........................................................................................................................................................................2211.0010000100
....................................................................GT------------------T--TTATGCATGTA-TTTTGTGT---................................................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................TTGTGT---ATATTGAAGTTAGTT.................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................TTTGTGT---ATATTGAAGTTAGTTT................................................................................................................................................................................................................................................................2311.0011000000
............................................................................................................................................................G---------ATAGTTA----TACAT---TGGGAT...................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................TT-CAGTGA-GG-TT-CAG-C----------------------CCCACAACGCT--...............................2711.0011000000
...........................................................................................................................TTAGTTTGGTAGTTAC-TTCGT.................................................................................................................................................................................................................................................2111.0010000010
...............GATTTCCAA-ATTTTATAAAGT.............................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................................GATTTT----------GACAAAATGATGT.........................................................................................................................................................................1911.0010000100
...........................................................................................................GTGT---ATATTGAAGTTAGTTTGGTAGT..........................................................................................................................................................................................................................................................2611.0010000100
....................................................................................................................ATTGAAGTTAGTTTGGTA............................................................................................................................................................................................................................................................1811.0010000010
....................................................................GT------------------T--TTATGCATGTA-TTTTGTG....................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................ATATTGAAGTTAGTTTGGTAGTTAC-TT....................................................................................................................................................................................................................................................2711.0010000010
......................................................................................................................................GTTAC-TTCGTG--TAAA-ACCG---------............................................................................................................................................................................................................................1911.0011000000
.............................................................................................................GT---ATATTGAAGTTAGTTTG...............................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................................AGTTAGTTTGGTAGTTAC-T.....................................................................................................................................................................................................................................................1911.0010000100
..............................................................................................................................................................................................................................................................................................ATTGTGATTCGATTT-CAGT................................................................................1911.0010000010
.....................................................................................................A-TTTTGTGT---ATATTGAAGTTAGTTT................................................................................................................................................................................................................................................................2511.0010000010
.....................................................................................................................................................................................................................................................................................................TTCGATTT-CAGTGA-GG-TT-CA.....................................................................2011.0010000010
...................................................................................................................................................................................................................................................................................................................................................................GCGCCACGCCCCTTT-TTGC...........1911.0011000000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2411.0010000100
......................................................................................................................................GTTAC-TTCGTG--TAAA-ACCG---------ATAGTT......................................................................................................................................................................................................................2511.0010000100
................................................................................................................................TTGGTAGTTAC-TTCGTG--TAA...........................................................................................................................................................................................................................................2011.0010000010
.................................................................................................ATGTA-TTTTGTGT---ATATTGAAG.......................................................................................................................................................................................................................................................................2211.0011000000
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................1911.0010000010
.................................................................................................................................................................................................................................................................................................GTGATTCGATTT-CAGTGA-G............................................................................1911.0011000000
droYak3
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAT-TAAAACATTT--T--------TAAATGT------------------T--TTATTCGTGTG-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TACA-ATCG---------ATAGATA----TACAT---TGGGATTTT----------GACAAAATGATGTGTAATATATAAA-----------------CAT---AAAT-------AAAAC--TGTGTGAATTT---TCATTGTGATTCAATTT-CAGTGA-GG-TT-TAG-C----------------------CCCACAACGCT--GAGCCACGCCCCATT-TTGCAAAGGGTA--TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................ATTT--T--------TAAATGT------------------T--TTATTCGTGT.............................................................................................................................................................................................................................................................................................2315.00503000020000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGT.........................................................................................................................................................................2413.00300010020000
................................................ATTT--T--------TAAATGT------------------T--TTATTCGTGTG-T..........................................................................................................................................................................................................................................................................................2512.00201000010000
.................................................TTT--T--------TAAATGT------------------T--TTATTCGTGTG-TTTTGT.....................................................................................................................................................................................................................................................................................2911.00100000010000
...................................................T--T--------TAAATGT------------------T--TTATTCGTGT.............................................................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................G---------ATAGATA----TACAT---TGGGAT...................................................................................................................................................................................................1911.00100000010000
...........................................................................................TTATTCGTGTG-TTTTGTGT---................................................................................................................................................................................................................................................................................1911.00101000000000
..................................................TT--T--------TAAATGT------------------T--TTATTCGTGTG-TT.........................................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................ATTCGTGTG-TTTTGTGT---ATATTGAA........................................................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGTAAT....................................................................................................................................................................2911.00100000010000
..........................................................................................................................GTTAGTTTGCTAGTTAC-TTCGTG--TAC...........................................................................................................................................................................................................................................2611.00101000000000
...................................................................................................................................................................................CAT---TGGGATTTT----------GACAAAATGATGTG........................................................................................................................................................................2611.00100000010000
.............................................................................................................................................................................................ATTTT----------GACAAAATGATGTGT.......................................................................................................................................................................2011.00100000010000
..................................................TT--T--------TAAATGT------------------T--TTATTCGTGTG-T..........................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................T--TTATTCGTGTG-TTTTGTGT---ATATTGA.........................................................................................................................................................................................................................................................................2711.00100000010000
..............................................................................................................................................................................................TTTT----------GACAAAATGATGTGT.......................................................................................................................................................................1911.00100000010000
..................................................................................................................ATATTGAAGTTAGTTTGCTAGTTAC-TT....................................................................................................................................................................................................................................................2711.00101000000000
........................................................................................T--TTATTCGTGTG-TTTTGTGT---ATATTGAAG.......................................................................................................................................................................................................................................................................2911.00100000010000
........................................................................................T--TTATTCGTGTG-TTTTGTGT---................................................................................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................CG---------ATAGATA----TACAT---TGGGAT...................................................................................................................................................................................................2011.00100000010000
..............................................ACATTT--T--------TAAATGT------------------T--TTATTCGTGT.............................................................................................................................................................................................................................................................................................2511.00101000000000
.............................................................................................................................................................................................................................................................AAT-------AAAAC--TGTGTGAATTT---......................................................................................................1911.00101000000000
..................TTCTAA-ATTTTATAAACTTTAT-TAAAAC..................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...........................................................................................................................................................CG---------ATAGATA----TACAT---TGGGA....................................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................T-TAG-C----------------------CCCACAACGCT--GAGC...........................2011.00100000010000
........................................................................................................................................................................................................................................................................AAAC--TGTGTGAATTT---TCATTGT...............................................................................................2211.00101000000000
..................................................................................................................................................................................ACAT---TGGGATTTT----------GACAAAATGA............................................................................................................................................................................2311.00101000000000
.............................................................................................ATTCGTGTG-TTTTGTGT---ATATTGA.........................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................ATTCGTGTG-TTTTGTGT---ATATTGAAG.......................................................................................................................................................................................................................................................................2611.00100000010000
............................................................................................................................................................................A----TACAT---TGGGATTTT----------GACA..................................................................................................................................................................................1911.00100000010000
........................................................................................................TTTGTGT---ATATTGAAGTTAGTTTGCTAG...........................................................................................................................................................................................................................................................2811.00101000000000
................................................................................................CGTGTG-TTTTGTGT---ATATTGAAGT......................................................................................................................................................................................................................................................................2411.00100000010000
....................................................................................................................................................................................AT---TGGGATTTT----------GACAAAATGATGTGTA......................................................................................................................................................................2711.00100000010000
..........................................................................................................................................................TCG---------ATAGATA----TACAT---TGGGATTTT----------GACAA.................................................................................................................................................................................2911.00100000010000
............................................................................................................................................................................................GATTTT----------GACAAAATGATGT.........................................................................................................................................................................1911.00100000010000
..............................................................................................................................................................................................................................ATATAAA-----------------CAT---AAAT-------AAAAC--TGTGT...............................................................................................................2411.00100001000000
droEug1
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTGAT-CGAAACATTT--A--------TTAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGACCG---------ATAGTTA----TACAT---TGGGATCTT----------AACAAAATGATGTGTAATATATAAA-----------------CCA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------TCCGACATGCT--GCGTCACGCCCCTTTCTTGCAATGGGTA--TSizeHit CountTotal NormTotal
No Reads
droBia1
TG-----TCGTGTGTGATTTCTAA-ATTTTATAATGTTCAT-TGAAACAGTT--A--------TAAATAT------------------T--TTGTGCATGTA-TTTTGTGT---ATATTGAAGTTAGTTTGCTAGTTAC-TTCGTG--TAAAGACGG---------ATAGTTA----TACAT---TGGGATATT----------GACAAAATGATGTGTAATATATAAA-----------------CCG---AACT-------CAAAC--TGTGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-CT-AAA-C----------------------CCAGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotal
No Reads
droTak1
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAAGTTTAT-TGAAACATTG--A--------TAAATGT------------------T--TTATGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTTGTG--TAAGGACCG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATAATGTGTAATATATAAA-----------------CAA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCTGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotal
No Reads
droEle1
TG-----TCGTGCGTGATTTCCAA-ATTTTATAAACTTTAT-CGAAACATTT--A--------TAAATGT------------------T--TC-TGCATGTA-TTTTGTGT---ATATTAAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGAACG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATAATGTGTAATATATAA------------------CAA-AGAAGT-------TAAAC--TATGTGAATTT---TTATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCCGAAATGCT--GCGCCACGCCCCTTT-TTGCAACGGGTA--TSizeHit CountTotal NormTotal
No Reads
droRho1
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAT-CGAAACATTT--A--------TTAATGT------------------T--TT-TGCATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTCGTG--TAAAGATCG---------ATAGTTA----TACAT---TGGGATCTT----------AGCAAAATAATGTGTAATATATAAA-----------------CCA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGA-GG-TC-CAG-C----------------------CCTGCAACGCT--GCGCCACGCCCCTTT-TTGCAATGGGTA--TSizeHit CountTotal NormTotal
No Reads
droFic1
TGTGTCGTCGTGCGTGATTTCTAA-ATTTTATAAAATTTAT-TGAAACATTT--G--------TAAATGT------------------T--TTATGCATGTA-TTTTGTTT---ATATTGAAGTTAGTTTGCTAGTTAT-TTCGTG--TGAAGACCG---------ATAGTTA----TACAT---TGGGATCTT----------GACAAAATGATGTGTAATATATAAA-----------------CTA---AACT-------CAAAC--TATGTGAATTT---TCATTGTGATTCGTTTT-CAGTGGAGG-TC-CAG-C----------------------CCCGCATCGCT--GCGCCACGCCCCTTT-TTGCAACGGGTA--TSizeHit CountTotal NormTotal
No Reads
droKik1
TG-----TTGTGCGTGATTTCTAA-ATTTTACAAACCCTAT-CGAGTCATAT--A--------TAACAGT------------------T--TTATGTATGTA-TTTTGTGT---ATATTGAAATTAGTTTGCTAGTTAC-TTTGTG--CAAAGACCG---------TTGGTTACATGTACAC---TGGGATCTT----------GACAAAATGATGTGTAATATATAAA-----------------CAA---TACT-------TGAAA--TATGTGAATTT---TCATTGTGATTTGTTTT-CAATGC-----------------------------------------------------------TGC-TTACGTTGGGTA--TSizeHit CountTotal NormTotal
No Reads
droAna3
TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTCTAC-CAGGACATAT--G--------TAAGCGT------------------T--TTATGTATGTA-TTTTGTGT---GTATTGCGATTAGGTTGCTAGTTAC-TTTGTT--CGAAGACCG---------ATAGTTT----TACAC---TAGGATCTT----------GACGGAATAATGTTTAATATAAAAA-----------------CCA---AACT-------T-AAC--CATGTGAATTT---TCAATGTGATTCGTTTT-CAGTGA-GG-CCTCAG-CC----------------TCAGC----CTCCGCCGAGCGCCACGCCCCGTT-TTTCACCGGGTA--TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................GTTT----TACAC---TAGGATCTT----------GACGGA................................................................................................................................................................................2413.003010110
.............................................................................................................................................................................................................................................................................................................................G-CC----------------TCAGC----CTCCGCCGAGCGC...........................2111.001000001
..................................................................................................................................................................................ACAC---TAGGATCTT----------GACGGAA...............................................................................................................................................................................2011.001000010
.......................................AC-CAGGACATAT--G--------TAAGCGT------------------T--.......................................................................................................................................................................................................................................................................................................2111.001000010
........................................................................................................................................................................................................................................................................................................GTTTT-CAGTGA-GG-CCTCAG-CC----------------T................................................2211.001010000
......................................................................................................................................GTTAC-TTTGTT--CGAAGACCG---------A...........................................................................................................................................................................................................................2111.001000010
..................................ACTCTAC-CAGGACATAT--G--------TA.................................................................................................................................................................................................................................................................................................................................2011.001000001
...................................................................................................GTA-TTTTGTGT---GTATTGCGA.......................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................GT---GTATTGCGATTAGGTTGCTAGT..........................................................................................................................................................................................................................................................2411.001100000
............................TTGTAAACTCTAC-CAGGACA.................................................................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................GATTCGTTTT-CAGTGA-GG-CCT.......................................................................2111.001100000
.......................................................................................................................GCGATTAGGTTGCTAGTTAC-TTT...................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................CTAGTTAC-TTTGTT--CGAAGACC......................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................AC-TTTGTT--CGAAGACCG---------ATA.........................................................................................................................................................................................................................2011.001000010
...............................................................................................................................................................................................................................................................................ATGTGAATTT---TCAATGTGATTC..........................................................................................2211.001001000
..........................................................................................................................ATTAGGTTGCTAGTTAC-TTTGTT--CGAA..........................................................................................................................................................................................................................................2711.001000010
........................................................................................................................................................................AGTTT----TACAC---TAGGATCTT----------GACGGA................................................................................................................................................................................2511.001000001
............................................................................................................................................................................................GATCTT----------GACGGAATAATGTTT.......................................................................................................................................................................2111.001000001
............................................................................................TATGTATGTA-TTTTGTGT---GTA.............................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................AC--CATGTGAATTT---TCAATGTGATTCGT........................................................................................2711.001010000
...........................................................................................................................................................................TT----TACAC---TAGGATCTT----------GACGGAATAATG..........................................................................................................................................................................2811.001010000
........................................................................................................................................................................AGTTT----TACAC---TAGGATCTT----------GACGGAA...............................................................................................................................................................................2611.001000010
........................................................................................................................................................................AGTTT----TACAC---TAGGATCTT----------......................................................................................................................................................................................1911.001010000
.............................................................................................................................................................................................................................................................................................................................G-CC----------------TCAGC----CTCCGCCGAGC.............................1911.001100000
.................................................................AGCGT------------------T--TTATGTATGTA-TT.........................................................................................................................................................................................................................................................................................1911.001000010
...................................................................................................................................................................................CAC---TAGGATCTT----------GACGGAATAAT...........................................................................................................................................................................2311.001000010
droBip1
TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTCCAT-CAGGACATAT--G--------TATGCGT------------------T--TTATGTATGTA-TTTTGTGT---ATATTGCGATTAGGTTGCTAGTTAC-TTTGTT--CAAAGACCG---------ATAGTTT----TACAC---TAGGATCTT----------GACGAAATAATGTTTAATACAAAAA-----------------CCA---AACT-------T-AAC--CATGTGAATTT---TCAATGTGATTCGTTTT-CAGTGA-GG-CCTCAG-CCGAACAGGC---AA--------GCAGCAGTTCA--GCGCCACGCCCCGTT-TTTCACTGGGCA--TSizeHit CountTotal NormTotal
No Reads
dp5
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAA-CGAGACACAT--ATGTATACCTAAATGT------------------TTTTTATGTATATT-TTTTGTGTACTATATTAAAATTAGTTTGCAAGTTATCTTTGTG--TAAGGACAGATCAGACGCATAGTTA----TACACCGGTGGGGTCTAGGTCGTGCCGGACAAAATTCTGTGTAATATATAGA-----------------CA----AACT-------GAAAA--TATGTGAACTTCTCTCATTGTGATTTGTTTT-CAGCGA-GC-CA----------------TCCAGTCGCTGCCCTGCAACGCC--GCGCCACGCCCCATT-TTGCAATGGGTG--TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................TG--TAAGGACAGATCAGACGCATAGTTA----.................................................................................................................................................................................................................27110.00100000000910
................................................................................................................................................TG--TAAGGACAGATCAGACGCATAG........................................................................................................................................................................................................................2417.0070000000610
..............................................................................................................................................TGTG--TAAGGACAGATCAGACGCATAGT.......................................................................................................................................................................................................................2715.0050000000500
....................................................................................................................................................TAAGGACAGATCAGACGCATAGTTA----.................................................................................................................................................................................................................2515.0050000000410
.................................................................................................................................................G--TAAGGACAGATCAGACGCATAGT.......................................................................................................................................................................................................................2414.0040000000004
................................................................................................................................................TG--TAAGGACAGATCAGACGCATAGT.......................................................................................................................................................................................................................2513.0030000000300
.................................................................................................................................................G--TAAGGACAGATCAGACGCATA.........................................................................................................................................................................................................................2213.0030000000003
.....................................................................................................................................................AAGGACAGATCAGACGCATAG........................................................................................................................................................................................................................2112.0020000000020
..............................................................................................................................................TGTG--TAAGGACAGATCAGACGCATAG........................................................................................................................................................................................................................2612.0020000000020
.....................................................................................................................................................AAGGACAGATCAGACGCATAGTTA----T................................................................................................................................................................................................................2512.0020000000020
...........................TTTATAAACTTTAA-CGAGAC..................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................GGTCTAGGTCGTGCCGGA....................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCGCTGCCCTGCAACGCC--GC.............................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................GCCCTGCAACGCC--GCGCCA.........................1911.0010100000000
..............................................................................................................................................TGTG--TAAGGACAGATCAGACGCATA.........................................................................................................................................................................................................................2511.0010000000100
..............................................................................................................................................................................................................................................................................TATGTGAACTTCTCTCATTGTGATT...........................................................................................2511.0010100000000
...............................................................................................................................................GTG--TAAGGACAGATCAGACGC............................................................................................................................................................................................................................2111.0010000000001
...............................................................................................................................................GTG--TAAGGACAGATCAGACGCA...........................................................................................................................................................................................................................2211.0010000000001
........................................................................................................................................................................................................................................................................................................GTTTT-CAGCGA-GC-CA----------------TCCAGTCGCTGCCC..........................................2911.0010001000000
.................................AACTTTAA-CGAGACACAT--ATGTATACC...................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................TTGTG--TAAGGACAGATCAGACGCATA.........................................................................................................................................................................................................................2611.0010000000010
.................................................................................................................................................G--TAAGGACAGATCAGACGCATAGTTA----.................................................................................................................................................................................................................2611.0010000000010
.................................................................................................................................................G--TAAGGACAGATCAGACG.............................................................................................................................................................................................................................1811.0010000100000
.................................................................................................................................................G--TAAGGACAGATCAGACGCATAG........................................................................................................................................................................................................................2311.0010000000001
.......................................................................................................................................................................................................TGCCGGACAAAATTCTGTGTA......................................................................................................................................................................2111.0010000000010
.............................................................................................................................................TTGTG--TAAGGACAGATCAGACG.............................................................................................................................................................................................................................2211.0010000001000
........................................................................................................................................................................................GTGGGGTCTAGGTCGTGCCGG.....................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................CGCATAGTTA----TACACCGGTGG......................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................TCGCTGCCCTGCAACGCC--GC.............................2011.0010001000000
....................................................................................................................................................TAAGGACAGATCAGACGCATAGTT......................................................................................................................................................................................................................2411.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................CAACGCC--GCGCCACGCCC....................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................CTGCCCTGCAACGCC--GCGCCA.........................2111.0010100000000
...............................................................................................................................................................................................................................................................................................TTGTGATTTGTTTT-CAGCGA-GC-CA----------------........................................................2411.0010000001000
................................................................................................................................................TG--TAAGGACAGATCAGACGCATAGA.......................................................................................................................................................................................................................2511.0010000000010
....................................................................................................................................................................................ACCGGTGGGGTCTAGGTCGTGCCG......................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................................................................................................................................................................................................TGCCCTGCAACGCC--GCGCCACGCCC....................2511.0010100000000
................................................................................................................................................TG--TAAGGACAGATCAGACGCATAGTTG----.................................................................................................................................................................................................................2711.0010000000010
................................................................................................................................................................................................TAGGTCGTGCCGGACAAAATTCTG..........................................................................................................................................................................2411.0010000001000
.....................................................................................................................................AGTTATCTTTGTG--TAAGGAC.......................................................................................................................................................................................................................................2011.0010010000000
..............................................................................................................................................................................................................CAAAATTCTGTGTAATATATA...............................................................................................................................................................2111.0010100000000
................................................................................................................................................TG--TAAGGACAGATCAGACGCA...........................................................................................................................................................................................................................2111.0010000000010
.......................................................................................................................................................................................GGTGGGGTCTAGGTCGTGCC.......................................................................................................................................................................................2011.0010000001000
............................................................................................................................................................................A----TACACCGGTGGGGTCTAGGTC............................................................................................................................................................................................2211.0010100000000
.........................ATTTTATAAACTTTAA-CGAGAC..................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
...........................................GAGACACAT--ATGTATACC...................................................................................................................................................................................................................................................................................................................................1811.0010000000001
.................................................................................................................................................................................TACACCGGTGGGGTCTAGGTCGTG.........................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................AAGGACAGATCAGACGCAT..........................................................................................................................................................................................................................1911.0010000000001
...........................................................................................................................................................................................................................................................................................CTCATTGTGATTTGTTTT-CAGCGA-GC-..........................................................................2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................GTCGCTGCCCTGCAACGCC--G..............................2011.0010100000000
....................................................................................................................................................................GCATAGTTA----TACACCGGTGGG.....................................................................................................................................................................................................2111.0010000100000
......................................................................................................................................................................................CGGTGGGGTCTAGGTCGTGCC.......................................................................................................................................................................................2111.0010000001000
.........................................................................................................................................................................................TGGGGTCTAGGTCGTGCCTT.....................................................................................................................................................................................2020.5010100000000
droPer2
TG-----TCGTGCGTGATTTCTAA-ATTTTATAAACTTTAA-CGAGACACAT--ATGTATACCTAAATGT------------------TTTTTATGTATATT-TTTTGTGTACTATATTAAAATTAGTTTGCAAGTTATCTTTGTG--TAAGGACAGATCAGACGCATAGTTA----TACACCGGTGGGGTCTAGGTCGTGCCGGACAAAATTCTGTGTAATATATAGA-----------------CA----AACT-------GAAAA--TATGTGAAATTCTCTCATTGTGATTTGTTTT-CAGCGA-GC-CA----------------TCCAGTCGCTGCCCTGCAACGCC--GCGCCACGCCCCATT-TTGCAATGGGTG--TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................CGTGCCGGACAAAATTCT...........................................................................................................................................................................1813.003300000
.................................................................................................................................................G--TAAGGACAGATCAGACGCATAGTT......................................................................................................................................................................................................................2513.003300000
............................................................................................................................................................................................GGTCTAGGTCGTGCCGGA....................................................................................................................................................................................1812.002200000
.................................................................................................................................................G--TAAGGACAGATCAGACGC............................................................................................................................................................................................................................1912.002200000
.................................................................................................................................................................................TACACCGGTGGGGTCTAGGTCGTGCC.......................................................................................................................................................................................2612.002200000
...............................................................................................................................................GTG--TAAGGACAGATCAGACGC............................................................................................................................................................................................................................2112.002200000
.............................................................................................................................................................................................................................................................................................CATTGTGATTTGTTTT-CAGC................................................................................2011.001001000
...................................................................................................................................................................CGCATAGTTA----TACACCGGTGGG.....................................................................................................................................................................................................2211.001001000
.....................................................................................................................................................AAGGACAGATCAGACGCATA.........................................................................................................................................................................................................................2011.001100000
............................................................................................................................................................................................................................ATATATAGA-----------------CA----AACT-------GAAAA--T...................................................................................................................2111.001000010
................................................................................................................................................TG--TAAGGACAGATCAGACGCATA.........................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................GTGCCGGACAAAATTCTGTGTA......................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................................................A----------------TCCAGTCGCTGCCCTGC.......................................1811.001100000
........................................................................................................................................................GACAGATCAGACGCATAGTT......................................................................................................................................................................................................................2011.001001000
.................................................................................................................................................................................................................................TAGA-----------------CA----AACT-------GAAAA--TATGT...............................................................................................................2011.001000010
.......................................................................................................................................................................................GGTGGGGTCTAGGTCGTGCCGG.....................................................................................................................................................................................2211.001010000
droWil2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT--ATGGCATGGCCGTAT-TTAGTTCGGAAC--TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................T--ATGGCATGGCCGTAT-TTAGTTCGGAAC--.2812.00202000
..........................................................................................................................................................................................................................................................................................................................................................................GGCCGTAT-TTAGTTCGGA.....1811.00100010
...............................................................................................................................................................................................................................................................................................................................................................CT--ATGGCATGGCCGTAT-T..............1811.00101000
.....................................................................................................................................................................................................................................................................................................................................................................GGCATGGCCGTAT-TTAGTTCGGAA....2411.00100010
droVir3
TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTTTAAACAAAAAACAT--ACGTATAAAA---------------------AAAA--AAAAACAAATATTTTTGTGT---ACATTT-AGTTAGTTTGCTAGTTAC-ATTTTGGCTGAGCAGTA---------A-------------------------TT----------GATA-AATGGCGTGTAATATATATA-----------------TAA---AATTATGTAAACATAT--TATGTGAACTTGTCTCATTGTGATTCGTTTTACGATGA-AT-AC-GAATCCTAATAACC-------------CCCG-AATCC----CGTCT--CTCCCGT-TCGTGGTG------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................CGTCT--CTCCCGT-TCGTGGTG------G2116.006002000000000000000000000000012000000000000000000000000000000010
..............................................................................................................................................TTTGGCTGAGCAGTA---------A-------------------------TT----------GAT...................................................................................................................................................................................2115.005000000000000000000000000000000020200000000000000000000000000010
....................................................................................................................................................................................................................................................................................AACTTGTCTCATTGTGATTCG.........................................................................................2114.004002000000000000000000000001010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TAATAACC-------------CCCG-AATCC----CGTC..........................2114.004000000000000001000000200000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GAACTTGTCTCATTGTGATTC..........................................................................................2113.003001000000000001000000000000001000000000000000000000000000000000
........................................................................................................................................................CAGTA---------A-------------------------TT----------GATA-AATGGCGTG........................................................................................................................................................................2113.003000000000000000000000000000100000000000000000000000000000000200
.....................................................................................................................................................................................................................................................................................................................AT-AC-GAATCCTAATAACC-------------CCC.........................................2113.003002000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................GTA---------A-------------------------TT----------GATA-AATGGCGTGTA......................................................................................................................................................................2113.003000000000000000000000000100000000000000000000000000000000000020
.................................................................................................................................TGCTAGTTAC-ATTTTGGCTGA...........................................................................................................................................................................................................................................2112.002000000000000000000000010000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTACGATGA-AT-AC-GAATCCT................................................................2012.002010000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GA-AT-AC-GAATCCTAATAACC-------------CC..........................................2212.002002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TGAGCAGTA---------A-------------------------TT----------GATA-AATGGCGTG........................................................................................................................................................................2512.002000000000000000000000000000000000000002000000000000000000000000
..................................................................................................................................GCTAGTTAC-ATTTTGGCTGAG..........................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TTAC-ATTTTGGCTGAGCAGTA---------............................................................................................................................................................................................................................2112.002001000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AATCC----CGTCT--CTCCCGT-TCGT...........2112.002000000000000000000000010000000000000000000000000000000000000010
.....................................................................................................................................AGTTAC-ATTTTGGCTGAGCAG.......................................................................................................................................................................................................................................2112.002001000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................TTAGTTTGCTAGTTAC-ATTTT.................................................................................................................................................................................................................................................2112.002001000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................AGTTAGTTTGCTAGTTAC-ATT...................................................................................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATAT--TATGTGAACTTGTCTCA...................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AGCAGTA---------A-------------------------TT----------GATA-AATGGCGT.........................................................................................................................................................................2212.002000000000000001000000001000000000000000000000000000000000000000
.....................................................................................................ATTTTTGTGT---ACATTT-AGTTA....................................................................................................................................................................................................................................................................2112.002000000000000000000000000001000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CG-AATCC----CGTCT--CTCCCGT-TC.............2112.002001000000000000000000000000000000000000000000000000000000000010
....................................................................................................TATTTTTGTGT---ACATTT-AGTT.....................................................................................................................................................................................................................................................................2112.002000000000000000000000000010000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATAACC-------------CCCG-AATCC----CGTCT--.......................2011.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................CTAGTTAC-ATTTTGGCTGAG..........................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTAGTTTGCTAGTTAC-ATTTTGGCT.............................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................TTTTGGCTGAGCAGTA---------A-------------------------TT----------GATA-AA...............................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................ATTGTGATTCGTTTTACGATG...............................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAACATAT--TATGTGAACTTGTCTCATTGT...............................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TATGTGAACTTGTCTCATTGTGATT...........................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTACGATGA-AT-AC-GAATCCT................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGTA---------A-------------------------TT----------GATA-AATGGCGT.........................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATA-AATGGCGTGTAATATATA...............................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.................................AACTTTAAACAAAAAACAT--ACGT........................................................................................................................................................................................................................................................................................................................................2311.001000001000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TGAGCAGTA---------A-------------------------TT----------GATA-AATGGC...........................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................GT---ACATTT-AGTTAGTTTGCTA............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACATTT-AGTTAGTTTGCTAGT..........................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................T---ACATTT-AGTTAGTTTGCTAG...........................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................TTGTCTCATTGTGATTCGTTT......................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCATTGTGATTCGTTTTACG..................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........TGCGTGATTTCTAA-ATTTTGTAAAC..............................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTGGCTGAGCAGTA---------A-------------------------TT----------GAT...................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................GTGT---ACATTT-AGTTAGTTTGCTAGTT.........................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CCCG-AATCC----CGTCT--CTCCCGT-...............2111.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................GTA---------A-------------------------TT----------GATA-AATGGCGTGTAA.....................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GATTCGTTTTACGATGA-AT-AC-GA.....................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
........CGTGCGTGATTTCTAA-ATTTT....................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................ATATTTTTGTGT---ACATTT-AGTTAGTT.................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................A-AATGGCGTGTAATATATATA-----------------............................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................TTTGGCTGAGCAGTA---------A-------------------------TT----------GATT-.................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GCAGTA---------A-------------------------TT----------GATA-AATGGCGT.........................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................TTTGGCTGAGCAGTA---------A-------------------------TT----------G.....................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................AC-ATTTTGGCTGAGCAGTA---------A-------------------------T.................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GTCT--CTCCCGT-TCGTGGTG------G2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AATAACC-------------CCCG-AATCC----CGTCT--.......................2111.001000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................AGTA---------A-------------------------TT----------GATA-AATGGCGTGTAAT....................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GTTTGCTAGTTAC-ATTTTGGC..............................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GTGTAATATATATA-----------------TAA---AATT..................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTTACGATGA-AT-AC-GAATCCT................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................A---------A-------------------------TT----------GATA-AATGGCGTGTAAT....................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................AAACATAT--TATGTGAACTTG........................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTTAC-ATTTTGGCTGAGCAGT......................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TT-AGTTAGTTTGCTAGTTAC-A.....................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTACGATGA-AT-AC-GAATCCTA...............................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CC----CGTCT--CTCCCGT-TCGTGG.........2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TTGTGT---ACATTT-AGTTAGTTTG...............................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TGAACTTGTCTCATTGTGATTC..........................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TTTGGCTGAGCAGTA---------A-------------------------TT----------GA....................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................TGCTAGTTAC-ATTTTGGCTGAGCC........................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AACATAT--TATGTGAACTTGTC......................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................ACATAT--TATGTGAACTTGTCT.....................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................A-------------------------TT----------GATA-AATGGCGTGTAAT....................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TAACC-------------CCCG-AATCC----CGTCT--C......................2011.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................TGT---ACATTT-AGTTAGTTTGCT.............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATTTTGGCTGAGCAGTA---------A-------------------------TT----------G.....................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................TATTTTTGTGT---ACATTT-AGTTAGTT.................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................A---AATTATGTAAACATAT--TATGTGAACT..........................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................T-AGTTAGTTTGCTAGTTAC-AT....................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................A-------------------------TT----------GATA-AATGGCGTGTAATATATAT..............................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................CC----CGTCT--CTCCCGT-TCGTGGT........2111.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CCTAATAACC-------------CCCG-AATCC----C.............................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GTTTTACGATGA-AT-AC-GAA....................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................GATA-AATGGCGTGTAATATAT................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CTAGTTAC-ATTTTGGCTGAGC.........................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GTCT--CTCCCGT-TCGTGGTG------.1911.001000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................AGCAGTA---------A-------------------------TT----------GATA-AATGGCG..........................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTTTACGATGA-AT-AC-GAAT...................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................A---------A-------------------------TT----------GATA-AATGGCGTGTA......................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................AATAACC-------------CCCG-AATCC----CGTCT--A......................2211.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................TTGTGT---ACATTT-AGTTAGTTT................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAACATAT--TATGTGAACTTGTCTC....................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...............................TAAACTTTAAACAAAAAACA...............................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........GTGCGTGATTTCTAA-ATTTT....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................TA---------A-------------------------TT----------GATA-AATGGCGTGTAA.....................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................TGGCTGAGCAGTA---------A-------------------------TT----------GATA-A................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................TCCTAATAACC-------------CCCG-AATCC----CGTCT--C......................2611.001000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CCG-AATCC----CGTCT--CTCCCGT-T..............2111.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................T-AC-GAATCCTAATAACC-------------CCCG-.......................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TCC----CGTCT--CTCCCGT-TCGTGGT........2211.001000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................AGTA---------A-------------------------TT----------GATA-AATGGCGTGT.......................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TGAACTTGTCTCATTGTGATT...........................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGTGAACTTGTCTCATTGTG..............................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TG-----TCGTGCGTGATTTCTAA-ATTTTGTAAACTTTAA-AC----ATA----CGTATATAT----GAAACAAAAAACAAAACAACA--AAATACAAATATTTTTGTGT---AAATTT-AGTTAGTTCGCTAGTTAC-ATTTTGGCTGAGCAGTA---------A-------------------------TT----------GATG-AATGGCGTGTAAAATACATATACATATATTACATATTCTA--------TATTAACGTACTATATGTGAATTTGTCTCATTGTGATTCGTTTA-----------TC-TAC-C--------CCTCGTTTC---------------T----CCTACCCTCCA---TCGTGGTG------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................GTA---------A-------------------------TT----------GATG-AATGGCGT.........................................................................................................................................................................1812.002100001
...............................................................................................................................................TTGGCTGAGCAGTA---------A-------------------------TT----------GATG-.................................................................................................................................................................................2112.002000002
.........................................................................................................................................................AGTA---------A-------------------------TT----------GATG-AATGGCGTGT.......................................................................................................................................................................2112.002100001
.......................................................................................................................................................GCAGTA---------A-------------------------TT----------GATG-AATGGCGTG........................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................TTCGTTTA-----------TC-TAC-C--------CCTCGTT...................................................2111.001100000
.........GTGCGTGATTTCTAA-ATTT.....................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................TTGGCTGAGCAGTA---------A-------------------------TT----------GAT...................................................................................................................................................................................2011.001000001
............................................................................................................................................................................................................................................................................................................................................GTTTC---------------T----CCTACCCTCCA---TCGT...........2111.001001000
............................................................................................................................................................................................................................................ATTACATATTCTA--------TATTAACGTACT.....................................................................................................................2511.001100000
.........................................................................................................................................................AGTA---------A-------------------------TT----------GATG-AATGGCGTGTAAAAT..................................................................................................................................................................2611.001000001
................................................................................................................................................................................................TT----------GATG-AATGGCGTGTAAAAT..................................................................................................................................................................2111.001000001
............................................................................................................................................ATTTTGGCTGAGCAGTA---------A-------------------------TT----------GATG-AA...............................................................................................................................................................................2611.001000001
.....................................................................................................................................AGTTAC-ATTTTGGCTGAGCAG.......................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................TTTC---------------T----CCTACCCTCCA---TCGTGG.........2211.001100000
................................................................................................................................................................................................................................................CATATTCTA--------TATTAACGTACTATATGT...............................................................................................................2711.001100000
................................................ATA----CGTATATAT----GAAACAAAAA....................................................................................................................................................................................................................................................................................................................2211.001100000
..............................GTAAACTTTAA-AC----ATA----CGTATATAT----..............................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................TTTGGCTGAGCAGTA---------A-------------------------TT----------GATG-AAT..............................................................................................................................................................................2511.001000001
...................................................................................................................................................CTGAGCAGTA---------A-------------------------TT----------GATG-AATG.............................................................................................................................................................................2111.001000100
..............................................................................................................................................................................................................................................TACATATTCTA--------TATTAACGTACTAT...................................................................................................................2511.001100000
............................................................................................................................................ATTTTGGCTGAGCAGTA---------A-------------------------TT----------G.....................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................................................................................................GTTTA-----------TC-TAC-C--------CCTCGTTTC---------------T----CCT..........................2411.001100000
.............................TGTAAACTTTAA-AC----ATA----CGTATATAT----GA............................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................................GT---AAATTT-AGTTAGTTCGCTAGT..........................................................................................................................................................................................................................................................2311.001000001
......................................................................................................................................GTTAC-ATTTTGGCTGAGCAGTA---------............................................................................................................................................................................................................................2211.001000001
........CGTGCGTGATTTCTAA-ATTTT....................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................A-------------------------TT----------GATG-AATGGCGTGTAAA....................................................................................................................................................................2011.001000001
.....................................................................................................................................AGTTAC-ATTTTGGCTGAGCA........................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................GTA---------A-------------------------TT----------GATG-AATGGCGTGTA......................................................................................................................................................................2111.001000001
..............................................................................................................................................................................................................................ATACATATACATATATTACAT...............................................................................................................................................2140.251100000
droGri2
TG-----TCGTACGTGATTTCTAAAATTTTATAAACTTTAA-ACAAAAAATGATACG--------TATAT------------------T--AAATACAAATATTTTTGTGT---ACATTT-AGTTAGTTTGCTAGTTAC-ATTTTGGATGAGTAGCG---------ATGATGA----TG------------------------------AGTGGAGTGTAATATATATA-----------------CTATATAAACATATAAACATAC--TATGTGAATTTCTCTTATTTTGATTCGTTTT-CATGAA-TGAAT-CAA-C----------------------C--ACA----------TCT--CTCCCGT-TAGTGGTGGCTGCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................TTTGGATGAGTAGCG---------ATGATG......................................................................................................................................................................................................................2111.00101
..............................................................................................................................................................................................................................................................................................ATTTTGATTCGTTTT-CATG................................................................................1911.00110

Generated: 05/18/2015 at 10:57 AM