ID:

dsi_13153

 Coordinate:

3l:18512517-18512666 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.5 -6.3

Flybase annnotation

CDS [3l_18512667_18512772_-]; exon [3l_18512667_18512772_-]; intron [3l_18509502_18512666_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCTTTGGATCCAAATAGATCATAGTGTTAATGGTACTGTACATCCAGTTGTAGCCCCCAATTGATAGGCGTGTTTTTTTCTCCATGTCGAATTTATAGATATTTTTATGGTGTTTAGTGGGACTTGCTTGTTGTTACGTAACACCAAGCATCGCATTTTAATGATGCTCTTGTTATTTATTAATTTTTCC
*******************************************************************************************************************************************.(((((.......(((((((....)))))))......))))).......************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 M024
male body		 M023
head
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
.................TCACCGACGATGAGAAAATGATGAAGGA............................................................................................................................................................................................................. 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
............................GAGAAAATGATGAAGGAGACTGTTGC.................................................................................................................................................................................................... 26 2 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0
..............................GAAAATGATGAAGGAGACT......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
................................AAATGATGAAGGAGACTGGTGAGT.................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
............................GAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CTCCATGTCGAATTTATA............................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TTTTATGGTGTTTAGTGGGACTTGCT.............................................................. 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................GTTACGTAACACCAAGCATCGC.................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
............................GAGAAAATGATGAAGGAGACTGG....................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TTTATGGTGTTTAGTGGGACT.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................AGAAAATGATGAAGGAGACT......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................GAGAAAATGATGAAGGAGACT......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............................AAAATGATGAAGGAGACTGTTGC.................................................................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................CTCACCGACGATGAGAAAATGATGAAGG.............................................................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGCATCGCATTTTAATG........................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..................................ATGATGAAGGAGACTGTTGCC................................................................................................................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...............................................CTGTTGAGTATCCCC............................................................................................................................................................................................ 15 1 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................GCTAGTTGTTAGGTAAC................................................ 17 2 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TTTAGAGATATTCTTACGGT............................................................................... 20 3 5 0.20 1 0 0 0 0 0 0 0 0 0 1 0
.......................................GAAGGAGACTGCTGAG................................................................................................................................................................................................... 16 1 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1
....................................GATGAAGGAGACTGTTGCC................................................................................................................................................................................................... 19 3 20 0.10 2 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TGTTTGGTGGGGCTTGCT.............................................................. 18 2 10 0.10 1 0 0 0 1 0 0 0 0 0 0 0
...............................................GTGGTGAGTATCCCC............................................................................................................................................................................................ 15 1 17 0.06 1 0 0 0 0 0 0 0 0 1 0 0
....................CCGACGATCGGAAAAGGAT................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

GGGTGGGGAGTGGAAGGAGTGGCTGCTACTCTTTTACTACTTCCTCTGACCACTCATAGGGGAAACCTAGGTTTATCTAGTATCACAATTACCATGACATGTAGGTCAACATCGGGGGTTAACTATCCGCACAAAAAAAGAGGTACAGCTTAAATATCTATAAAAATACCACAAATCACCCTGAACGAACAACAATGCATTGTGGTTCGTAGCGTAAAATTACTACGAGAACAATAAATAATTAAAAAGG
**************************************************************.(((((.......(((((((....)))))))......))))).......******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 M053
female body
 M024
male body
......................................................................................................................................................................................................AGTGTGGTTCATAGCGTAA................................. 19 2 5 3.60 18 11 3 2 2 0 0 0 0 0
...........................................................................................................................................................................................................GGTTCATAGCGTAAA................................ 15 1 20 2.00 40 21 14 4 1 0 0 0 0 0
.......................................................................................................................................................................................................GTGTGGTTCATAGCGTAAA................................ 19 2 2 2.00 4 1 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGTGTGGTTCATAGCGTAAA................................ 20 2 2 2.00 4 3 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................AGTGTGGTTCATAGCGTA.................................. 18 2 6 1.83 11 3 4 2 1 0 1 0 0 0
.....................................................................................................................................................................................................AAGTGTGGTTCATAGCGTAAA................................ 21 3 4 1.50 6 6 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGTTCATAGCGTAAA................................ 16 1 4 1.50 6 5 0 0 0 0 1 0 0 0
..........TGGAAGGAGTGGCTGCTACTCT.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................AGTGTGGTTCATAGCGT................................... 17 2 10 1.00 10 5 1 2 2 0 0 0 0 0
.........................................................................................................................................................................................................GTGGTTCATAGCGTAAA................................ 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTGTGGTTCATAGCGTAAAA............................... 20 2 2 0.50 1 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................................GTGGTTCATAGCGTAAAAC.............................. 19 2 4 0.50 2 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGTGTGGTTCATAGCGTAA................................. 20 3 10 0.30 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGTGTGGTCCATAGCGTAA................................. 19 3 18 0.22 4 2 0 1 0 0 0 0 1 0
......................................................................................................................................................................................................AGTGTGGTTCATAGCG.................................... 16 2 20 0.15 3 1 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................AAGTGTGGTTCATAGCGTA.................................. 19 3 20 0.15 3 1 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................TGTGGTTCATAGCGTAA................................. 17 1 7 0.14 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................TGTGGTCCATAGCGTAAA................................ 18 2 7 0.14 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................................GTGGTTCATAGCGTAA................................. 16 1 8 0.13 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TGTGGTTCATAGCGTA.................................. 16 1 9 0.11 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGGTTCATAGCGTAA................................. 15 1 18 0.11 2 2 0 0 0 0 0 0 0 0
...............................................GACCACTCAAAGGGGCA.......................................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 0 0 2 0 0 0
.......................................................................................................................................................................................................GTGTGGTTCATAGCGTA.................................. 17 2 20 0.10 2 0 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TGGTTCATAGCGTAAAACGA............................ 20 3 11 0.09 1 0 0 0 1 0 0 0 0 0
....................................................................AGGCTTAACTAGTATGACA................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 1
...............................................GACCACTCAAAGGGG............................................................................................................................................................................................ 15 1 16 0.06 1 1 0 0 0 0 0 0 0 0
......................................................................................................AGCTCAACGTCTGGGGTTA................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...............GGAGTGGCTGCGAAT............................................................................................................................................................................................................................ 15 2 20 0.05 1 0 1 0 0 0 0 0 0 0
............GAAGGAGTGGCTGGAACTA........................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:18512467-18512716 - dsi_13153 CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCTTTGGA-----------TCCAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ATCCAGTTGTAG-------CCC-C-CAA----TTGATAGGCG-TGT-----------TTTTTTC---------TCCAT--GTCGAA--TTTATAGATATTT-----------TT--ATGGTGTTTAGTGGGAC-TTGCTTGTTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATTT--TT-----CC
droSec2 scaffold_19:856523-856772 - CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCTTTGGA-----------TCCAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ATCCAGTTGTAG-------CCC-C-CAA----TTGATAGGCG-TGT-----------TTTTTTC---------TCCAT--GTCGAA--TTTTTAGTTATTT-----------TT--ATGGTGCTTAGTGGGAC-TTGCTTGTTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATTT--TT-----CC
dm3 chr3L:18890849-18891093 - CCCACCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATACCCTTTGGA-----------TCTAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ACGGAGTTGTAG-------TCC-C-CAT----TTGATAGGCG-TGT-----------TTTT-TC---------TCCAT--GTCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAG---AAC-TTGCTTGGTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATT---TT-----CC
droEre2 scaffold_4784:18707340-18707580 - CCCACCCCTCACCTTCCTCACTGATGACGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCT-TGGA-----------TCTACA-TA-G--ATCAT-------------------------------------------------------------------AGTA----TAGT-GGT-A-CTGTAA-GTCCAGTTGTAT-------CCC-CAAAT----TGGATAGGCG-TGT-----------TTTT--G---------TCCAT--GTCGGA--TTTTTGGATATTT-----------TT--ATGGTGTTTAGTTGGAC-GTGCC---TGTTACGTAACACCAATCATCGCAT----ATTAATGATGCT-CT-------TATTTATTAATTT--TT-----TC
droYak3 3L:21727674-21727913 + CCCACCCCTCACCTTCCTAACCGATGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCT--TAAA-----------TCTACA-TA-G--ATAAT-------------------------------------------------------------------AGTAT---TGAT-GGA-A-CTGTGA-GTCCAGTTGTAA-------TAT-A-GGGATATTAGATAGCCA-TAT-----------TTTT--------------------TCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTTGGAC-TTGCT---TGTTACGTAACTCCAAGCATCGCAT----ATTATTGATGCT-CT---TG-ATATTTGTTATTTA--TT-----CC
droEug1 scf7180000409471:598425-598676 + CCCACCCCTCACTTTCTTCACCGAAGATGAGAAGATGATGAAGGAGACTGGTGAGTTTCTCTT-TAGA-----------TTCATA-TT-G--ATCTTA------------------------------------------------------------------GGTGC---TCTT-AGT-T-CTGTAA-ATCTAACATTGG-------TCC-C-ATT----TTGATAAGCG-TGT-----------TTTT--T---------TCCGT--GCCAAAATTTTTAAGATATTT-----------GT--GTGGTGTTTGGTTTGAC-TTGCT---TGTTACGTAACTCCAAGCATCGCAT----ATTGATGATGCT-CTTGTTG-TTATTTATTAATAT--TTTC---CA
droBia1 scf7180000302529:612031-612282 + CCCACCTCTCACTTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCCGCC--CAG-----------TCTACA-CACTAGACCATC------------------------------------------------------------------AGCTC---GCA--GGG-T-TTGTAAGACCCAGTGGCAG-------ACC-C-ACT----TTGATAAGCG-TGT-----------TTTTTCC---ATG---TCCAT--GTCGAG--TCTTTAGATATTT-----------CT--GTGGTGTTTGGTTTGAC-T-GC----TGTTGCGTAACTCAGAGCATCGCAT----ACTGGTGATGCT-CTTGTTG-ATAT-TATGAACGT--TT-----CC
droTak1 scf7180000415184:155260-155512 + CCCACCCCTCACTTTCCTTACAGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCATTC-TAGA-----------TTTATA-TA-G--GCCATC------------------------------------------------------------------GGAA----TACA-GGG-T-TTGTAA-ATCCAATTGTGG-------ACC-C-ATT----TTGATAAGCG-TGT-----------TTTT--T---------TCCAT--GTCGAA--TTTTTAGATATTT-----------AT--ATGGCGCTTAGTTTGAC-TTGCT---TGTTACGTAACAAAGAGCATCGCAT----ATTGATGCTGCTACTTGTTG-TTATTTATTAACAT--TTCCATTCC
droEle1 scf7180000491249:6160769-6161020 - CCCACCCCTTACCTTCCTTACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCGCCC-TTAA-----------CTTATG-TA-G--ATCATC------------------------------------------------------------------AGAAT---TCAG-AGT-GATT-TTA-CTCCAAGTGTAG-------CCC-C-ATT----TCGATAAGCG-TGT-----------TTTTTTT---------TCCAT--GCCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTT-GAC-TTGCC---TGTTACGTAACTCCAAGCATCGCCTC---ATTCATGATGCT-CTTGTTG-TTATTTATTAATATTTTT-----GC
droRho1 scf7180000773959:38001-38252 + CCCACCTCTTACCTTCCTTACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTTTCGCCC-TAGA-----------TTTATG-TA-G--ATCATC------------------------------------------------------------------AGAAT---CCAG-GGT-T-CTGTAA-GTCCAAGTGCAG-------CTC-C-AAT----TCGATAAGCA-TGT-----------TGTTCGT---------TCCAT--GCCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTTGGAC-TCGCC---TGTTACGTAACTCCAAACATCACAT----ATTAAAGATGTT-CTTGTTG-TTATTTATTAATATATTC-----GC
droFic1 scf7180000453824:248043-248290 - CCCACCACTCACCTTCCTCACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTTTCCCT--TTGA-----------TCTAAA-CA-T--ATATT-------------------------------------------------------------------ATTACAACCAACAAGCC-----AAA-GTCAAACTGTAG-------CAC-A-ATT----TTGATAAGCG-CGT-----------TTTATTT---------TCCAT--GCTGAA--TTTTTAGATATCT-----------GT--GTGGTGTTTAGTTTGAC-TTGA----TGTTACGTAACTCCGAGACTCGAAT----ACTGCTGACATG-CTTGTTTTGTATTTATTAATAT--TT------T
droKik1 scf7180000302248:79415-79651 + TCCCCCGCTCACCTTCCTCACCGACGACGAGAAGATGATGAAGGAGACTGGTGAGTTACCTT--TTGA-----------ACTATA-TA-G--ATC--------------------------------------------------------------------------------------T-CTGCAAGTTCTAGATATAA-------CCC-C-AGA----ACGATAAGCG-TGT-----------TTTACTT---------GCTAT--TCGGAA--TTTTTATATATTTT----------TT--ATGGTGTTTAGTTAGTC-TTGCT---TGTTACGTAACTCCGAGCATCGCAT----ATTGATGCTGCC-CCTGTTG-TTATTTACTATTTG-TTT-----TC
droAna3 scaffold_13337:18550024-18550259 + CCCACCACTCACCTTCCTCACCGAAGACGAGAAGATGATGAAGGAGACTGGTGAGTTTCCCCC-AA--------------------TG-G--GGCTT-------------------------------------------------------------------TATGT---ACTT-GTA-A-CTGTAA-AACTAG-----G-------TCCCCGAGA----ATGATAAGCG-TGC-----------TTTAT-T---------TTTAT--ACCATA--ATATTAGATATTT------------T--ATTTTGTTTAGCTAGTC-GGTCT---AGTTACGTAACTCCAAGCAGCACAT----ATTGATGCTGTT-CTCTTTA-TTATTTATGAACAT--TT-----CC
droBip1 scf7180000396741:1736765-1737000 + CCCACCACTCACCTTCCTCACCGATGACGAGAAGATGATGAAGGAGACTGGTGAGTTGCCCCC-ATTG-------G---G--------------------------------------------------------------------------------------------------AA-T-TTGTAC-ATTTAGCTGTAAAACTGGGTCCCCGAAC----ATGATAAGCG-TGC-----------TTTATTT---------TCCAT--ACCACA--ATATTAGATATTT------------T--ATTTTGTTTAGCTAGTC-GGTCT---AGTTACGTAACTCCAAGCAGAAATCT---ATTGATGCTGTT-CTCTTTG-TTATTTATGAACAT--TT-----CC
dp5 XR_group6:4066481-4066745 + dps_3030 CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGATTCCTTTGTA-----------G------------------------------------------------------------------AC-TGTGCACAGATCTAAAGTTC---TAGG-GGCCC-CTGTAA-TTTAAACTGTAA-------TCC-T-GCT----TTGATAAGCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAA--TTTTAAGATATTT-----------TTTTATTGTGT---------G-CCGCT---TGTTACGTAACTCCAAGCATCTCAT----ATGGAGGCTG----T---TT-GTATTTATTATTAT--TT-----GA
droPer2 scaffold_9:2355734-2355999 + CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGATTCCTTTGTA-----------C------------------------------------------------------------------AC-TGTGCACAGATCTAAAGTTC---TAGG-GGCCC-CTGTAA-TTTTAACTGTAA-------TCC-T-GCT----TTGATAAGCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAA--TTTTAAGATATTTTTT--------TT--ATTAT---------GTG-CCGCT---TGTTACGTAACTCCAAGCATCTCAT----ATGGAGGCTG----T---TT-GTATTTATTATTAT--TT-----GA
droWil2 scf2_1100000004768:150763-150818 - ACCACCGTTGACATATCTCACCGACGATGAGAAGATGATGAAGGAGACGGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:13552527-13552767 + dvi_19805 TCCCCCGTTGACATACCTCACCGACGACGAGAAGATGATGAAGGAGACAGGTGAGTCCTGCCA-CTAG-----------GCTATACT-ATATACAATATGTACGCTA-AGCC----CTTGCCT--CTTAAGTTAGCGTGTTTGCAGTC-GG----------------------------------------------------------------------------------------------------------------TGCAC--AAATAA--TTTTTAGATCAGTT----------TTTTTTTGTGTTGCTTTCAACATCGGTTTTTGTTACGTAATT-TAATCATCGCAT----ATTTTAGTA--T-TT---AG-TTATTAATTATTAT--AA-----AA
droMoj3 scaffold_6680:13787900-13788163 - ACCTGCACTAACATTCCTCACCGACGATGAGAAAATGATGAAGGAGACAGGTGAGTC----CTTTGGCTAGATCAGTAGAGTATAGC-ATATATGA-ATATAGACTATAGCCTTCACTTGCCTTTCTTAAG----CAACTTTGTAGTGTGG----------------------------------------------TGCA------------T-A------------------------------------------------------AAATGA--TTTTAAGATAATTTTTTACTTTTTTT--TTTTTTTGTAGTCAACA-TCGGTTTTTGTTACGTAATT-TAATCAACGCATGGGTGTTGTTGTTGTA-GTTGTTG-TTCCTTATTTAT------------T
droGri2 scaffold_15110:18976035-18976090 + CCCGCCAATAACTCACCTCACCGACGATGAGAAAATGATGAAGGAGACGGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCTTTGGA-----------TCCAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ATCCAGTTGTAG-------CCC-C-CAA----TTGATAGGCG-TGT-----------TTTTTTC---------TCCAT--GTCGAA--TTTATAGATATTT-----------TT--ATGGTGTTTAGTGGGAC-TTGCTTGTTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATTT--TT-----CCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TCACCGACGATGAGAAAATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000000000
..............................GAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
................................AAATGATGAAGGAGACTGGTGAGT...............................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............................GAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................................................................................................................................................C---------TCCAT--GTCGAA--TTTATA...........................................................................................................................1811.00100100000000000000
.................................................................................................................................................................................................................................................................................................TT-----------TT--ATGGTGTTTAGTGGGAC-TTGCT..............................................................................2611.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................GTTACGTAACACCAAGCATCGC....................................................2211.00100000000000100000
............................GAGAAAATGATGAAGGAGACTGG....................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................T-----------TT--ATGGTGTTTAGTGGGAC-T..................................................................................2111.00101000000000000000
.............................AGAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
............................GAGAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
................CTCACCGACGATGAGAAAATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................AAGCATCGCAT----TTTAATG.......................................1811.00110000000000000000
droSec2
CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCTTTGGA-----------TCCAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ATCCAGTTGTAG-------CCC-C-CAA----TTGATAGGCG-TGT-----------TTTTTTC---------TCCAT--GTCGAA--TTTTTAGTTATTT-----------TT--ATGGTGCTTAGTGGGAC-TTGCTTGTTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATTT--TT-----CCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............CTTCCTCACCGACGATGAG........................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.................................AATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1811.0011000
..CACCCCTCACCTTCCTCACCGAC..............................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
............................GAGAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2111.0010010
........................CGATGAGAAAATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................................................................................................................................ATTT-----------TT--ATGGTGCTTAGTGGG......................................................................................2111.0010001
..........ACCTTCCTCACCGACGATGAG........................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................AAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
CCCACCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTATACCCTTTGGA-----------TCTAAA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTAC-ACGGAGTTGTAG-------TCC-C-CAT----TTGATAGGCG-TGT-----------TTTT-TC---------TCCAT--GTCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAG---AAC-TTGCTTGGTGTTACGTAACACCAAGCATCGCAT----TTTAATGATGCT-CT---TG-TTATTTATTAATT---TT-----CCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................CACCGACGATGAGAAAATGATGA..............................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCATCGCAT----TTTAATGA......................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAT-------------------------------------------------------------------AGTGT---TAAT-GGT-A-CTGTA...........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGAT................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTCACCGACGATGAGAAAATGAT................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAATGATGAAGGAGACTG.....................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................TAACACCAAGCATCGCAT----TT............................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CCAT--GTCGAA--TTTTTAGATAT......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGATGAAGGAGACTGGTGAGT...............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................TTACGTAACACCAAGCATCGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGAGAAAATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGATGAGAAAATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACGATGAGAAAATGATGAAG............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GATGAAGGAGACTGGTGC.................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................AA-TA-G--ATCAT-------------------------------------------------------------------AGTGT---TAAT-GG....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................TGAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTATACCCTTTGGA-----------TCT.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................AT-GGT-A-CTGTAC-ACGGAGTTGA...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TAAT-GGT-A-CTGTAC-ACGGAGT..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGGTGTTTAG---AAC-TTGCTTGGTGT........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................GTTGTAG-------TCC-C-CAT----TTGATAG..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGAAAATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCGACGATGAGAAAATG..................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCACCGACGATGAGAAAATGA.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAATGATGAAGGAGACTGGTG..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGT-----------TTTT-TC---------TCCAT--GTCGAA--T................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................T-GGT-A-CTGTAC-ACGGAGTTGT...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................GTTGTAG-------TCC-C-CAT----TTGATAGGCG-TG............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................................TTT-----------TT--ATGGTGTTTAG---AAC-T..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TGTTTAG---AAC-TTGCTTGGTGT........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...ACCCCTCACCTTTCTCACCGA...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................AG---AAC-TTGCTTGGTGTTACGT...................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCACCGACGATGAGAAAAT...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................ACCGACGATGAGAAAATGATGAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGAGAAAATGATGAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCGACGATGAGAAAATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................T--ATGGTGTTTAG---AAC-TTGCTT.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................AGAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAAAATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................GGAGTTGTAG-------TCC-C-CAT----TTGATAGGC................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGATGAA.............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGCTTGGTGTTACGTAAC................................................................1820.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCCACCCCTCACCTTCCTCACTGATGACGAGAAAATGATGAAGGAGACTGGTGAGTATCCCCT-TGGA-----------TCTACA-TA-G--ATCAT-------------------------------------------------------------------AGTA----TAGT-GGT-A-CTGTAA-GTCCAGTTGTAT-------CCC-CAAAT----TGGATAGGCG-TGT-----------TTTT--G---------TCCAT--GTCGGA--TTTTTGGATATTT-----------TT--ATGGTGTTTAGTTGGAC-GTGCC---TGTTACGTAACACCAATCATCGCAT----ATTAATGATGCT-CT-------TATTTATTAATTT--TT-----TCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................AATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1812.0021001000
..............TCCTCACTGATGACGAGAA......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
............................GAGAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
................................AAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
............CTTCCTCACTGATGACGAGA.......................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
............CTTCCTCACTGATGACGAGAAA.....................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
CCCACCCCTCACCTTCCTAACCGATGATGAGAAAATGATGAAGGAGACTGGTGAGTATCCCT--TAAA-----------TCTACA-TA-G--ATAAT-------------------------------------------------------------------AGTAT---TGAT-GGA-A-CTGTGA-GTCCAGTTGTAA-------TAT-A-GGGATATTAGATAGCCA-TAT-----------TTTT--------------------TCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTTGGAC-TTGCT---TGTTACGTAACTCCAAGCATCGCAT----ATTATTGATGCT-CT---TG-ATATTTGTTATTTA--TT-----CCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................GAAAATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................1921.00200000020000
.........CACCTTCCTAACCGATGATGAGAAA.....................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
............CTTCCTAACCGATGATGAGA.......................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.......................................................................................................................................................................AT---TGAT-GGA-A-CTGTGA-GTCCA....................................................................................................................................................................................................................2120.50110000000000
....................................................................................................................................................................AGTAT---TGAT-GGA-A-CTGTGA-GTCCAGT..................................................................................................................................................................................................................2620.50100000010000
...................................................................................................................................................................................................................................................................................................................................................................AT----ATTATTGATGCT-CT---TG-AT.......................2020.50100100000000
..........................ATGAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2520.50110000000000
..............................................................................................AAT-------------------------------------------------------------------AGTAT---TGAT-GGA-A-CTGTGA-GT.......................................................................................................................................................................................................................2420.50100000010000
.........................GATGAGAAAATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000
.......................................................................................................................................................................................................................................................................................................................GTTTAGTTGGAC-TTGCT---TGTTACGT...................................................................2520.50100000010000
..................................ATGATGAAGGAGACTGGTGAGT...............................................................................................................................................................................................................................................................................................................................................................2220.50100010000000
..........................ATGAGAAAATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1920.50100000010000
............................GAGAAAATGATGAAGGAGACC......................................................................................................................................................................................................................................................................................................................................................................2120.50110000000000
droEug1
CCCACCCCTCACTTTCTTCACCGAAGATGAGAAGATGATGAAGGAGACTGGTGAGTTTCTCTT-TAGA-----------TTCATA-TT-G--ATCTTA------------------------------------------------------------------GGTGC---TCTT-AGT-T-CTGTAA-ATCTAACATTGG-------TCC-C-ATT----TTGATAAGCG-TGT-----------TTTT--T---------TCCGT--GCCAAAATTTTTAAGATATTT-----------GT--GTGGTGTTTGGTTTGAC-TTGCT---TGTTACGTAACTCCAAGCATCGCAT----ATTGATGATGCT-CTTGTTG-TTATTTATTAATAT--TTTC---CASizeHit CountTotal NormTotal
No Reads
droBia1
CCCACCTCTCACTTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCCGCC--CAG-----------TCTACA-CACTAGACCATC------------------------------------------------------------------AGCTC---GCA--GGG-T-TTGTAAGACCCAGTGGCAG-------ACC-C-ACT----TTGATAAGCG-TGT-----------TTTTTCC---ATG---TCCAT--GTCGAG--TCTTTAGATATTT-----------CT--GTGGTGTTTGGTTTGAC-T-GC----TGTTGCGTAACTCAGAGCATCGCAT----ACTGGTGATGCT-CTTGTTG-ATAT-TATGAACGT--TT-----CCSizeHit CountTotal NormTotal
No Reads
droTak1
CCCACCCCTCACTTTCCTTACAGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCATTC-TAGA-----------TTTATA-TA-G--GCCATC------------------------------------------------------------------GGAA----TACA-GGG-T-TTGTAA-ATCCAATTGTGG-------ACC-C-ATT----TTGATAAGCG-TGT-----------TTTT--T---------TCCAT--GTCGAA--TTTTTAGATATTT-----------AT--ATGGCGCTTAGTTTGAC-TTGCT---TGTTACGTAACAAAGAGCATCGCAT----ATTGATGCTGCTACTTGTTG-TTATTTATTAACAT--TTCCATTCCSizeHit CountTotal NormTotal
No Reads
droEle1
CCCACCCCTTACCTTCCTTACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCGCCC-TTAA-----------CTTATG-TA-G--ATCATC------------------------------------------------------------------AGAAT---TCAG-AGT-GATT-TTA-CTCCAAGTGTAG-------CCC-C-ATT----TCGATAAGCG-TGT-----------TTTTTTT---------TCCAT--GCCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTT-GAC-TTGCC---TGTTACGTAACTCCAAGCATCGCCTC---ATTCATGATGCT-CTTGTTG-TTATTTATTAATATTTTT-----GCSizeHit CountTotal NormTotal
No Reads
droRho1
CCCACCTCTTACCTTCCTTACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTTTCGCCC-TAGA-----------TTTATG-TA-G--ATCATC------------------------------------------------------------------AGAAT---CCAG-GGT-T-CTGTAA-GTCCAAGTGCAG-------CTC-C-AAT----TCGATAAGCA-TGT-----------TGTTCGT---------TCCAT--GCCGAA--TTTTTAGATATTT-----------TT--ATGGTGTTTAGTTGGAC-TCGCC---TGTTACGTAACTCCAAACATCACAT----ATTAAAGATGTT-CTTGTTG-TTATTTATTAATATATTC-----GCSizeHit CountTotal NormTotal
No Reads
droFic1
CCCACCACTCACCTTCCTCACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTTTCCCT--TTGA-----------TCTAAA-CA-T--ATATT-------------------------------------------------------------------ATTACAACCAACAAGCC-----AAA-GTCAAACTGTAG-------CAC-A-ATT----TTGATAAGCG-CGT-----------TTTATTT---------TCCAT--GCTGAA--TTTTTAGATATCT-----------GT--GTGGTGTTTAGTTTGAC-TTGA----TGTTACGTAACTCCGAGACTCGAAT----ACTGCTGACATG-CTTGTTTTGTATTTATTAATAT--TT------TSizeHit CountTotal NormTotal
No Reads
droKik1
TCCCCCGCTCACCTTCCTCACCGACGACGAGAAGATGATGAAGGAGACTGGTGAGTTACCTT--TTGA-----------ACTATA-TA-G--ATC--------------------------------------------------------------------------------------T-CTGCAAGTTCTAGATATAA-------CCC-C-AGA----ACGATAAGCG-TGT-----------TTTACTT---------GCTAT--TCGGAA--TTTTTATATATTTT----------TT--ATGGTGTTTAGTTAGTC-TTGCT---TGTTACGTAACTCCGAGCATCGCAT----ATTGATGCTGCC-CCTGTTG-TTATTTACTATTTG-TTT-----TCSizeHit CountTotal NormTotal
No Reads
droAna3
CCCACCACTCACCTTCCTCACCGAAGACGAGAAGATGATGAAGGAGACTGGTGAGTTTCCCCC-AA--------------------TG-G--GGCTT-------------------------------------------------------------------TATGT---ACTT-GTA-A-CTGTAA-AACTAG-----G-------TCCCCGAGA----ATGATAAGCG-TGC-----------TTTAT-T---------TTTAT--ACCATA--ATATTAGATATTT------------T--ATTTTGTTTAGCTAGTC-GGTCT---AGTTACGTAACTCCAAGCAGCACAT----ATTGATGCTGTT-CTCTTTA-TTATTTATGAACAT--TT-----CCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................AGACGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2312.002000020
......................GAAGACGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.............TTCCTCACCGAAGACGAGAAGA....................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..............................GAAGATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................CACCGAAGACGAGAAGATGATGA..............................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................GAAGATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................GACGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.........................GACGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.........CACCTTCCTCACCGAAGACGAGAA......................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................ATGATGAAGGAGACTGGTGA.................................................................................................................................................................................................................................................................................................................................................................2011.001000010
........................AGACGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................ATGATGAAGGAGACTGGTGAG................................................................................................................................................................................................................................................................................................................................................................2111.001000001
droBip1
CCCACCACTCACCTTCCTCACCGATGACGAGAAGATGATGAAGGAGACTGGTGAGTTGCCCCC-ATTG-------G---G--------------------------------------------------------------------------------------------------AA-T-TTGTAC-ATTTAGCTGTAAAACTGGGTCCCCGAAC----ATGATAAGCG-TGC-----------TTTATTT---------TCCAT--ACCACA--ATATTAGATATTT------------T--ATTTTGTTTAGCTAGTC-GGTCT---AGTTACGTAACTCCAAGCAGAAATCT---ATTGATGCTGTT-CTCTTTG-TTATTTATGAACAT--TT-----CCSizeHit CountTotal NormTotal
No Reads
dp5
CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGATTCCTTTGTA-----------G------------------------------------------------------------------AC-TGTGCACAGATCTAAAGTTC---TAGG-GGCCC-CTGTAA-TTTAAACTGTAA-------TCC-T-GCT----TTGATAAGCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAA--TTTTAAGATATTT-----------TTTTATTGTGT---------G-CCGCT---TGTTACGTAACTCCAAGCATCTCAT----ATGGAGGCTG----T---TT-GTATTTATTATTAT--TT-----GASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................ATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1916.0060300102000
..........................ATGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2115.0050400001000
...........................TGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1812.0020200000000
.................TCACCGAGGATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2712.0020000000200
...............CCTCACCGAGGATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2912.0020000000200
.......CTGACCTTCCTCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................1912.0020100100000
..........................ATGAGAAGATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
.....CTCTGACCTTCCTCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....CTCTGACCTTCCTCACCGAGGAT...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..CACCTCTGACCTTCCTCACCGAG..............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................TGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................CACCGAGGATGAGAAGATGATGA..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
..........................ATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
..............................GAAGATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................GATGATGAAGGAGACTGGTGC.................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
..CACCTCTGACCTTCCTCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............CTTCCTCACCGAGGATGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
.............................AGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................CACCGAGGATGAGAAGATGATGAAG............................................................................................................................................................................................................................................................................................................................................................................2511.0010000001000
droPer2
CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGATTCCTTTGTA-----------C------------------------------------------------------------------AC-TGTGCACAGATCTAAAGTTC---TAGG-GGCCC-CTGTAA-TTTTAACTGTAA-------TCC-T-GCT----TTGATAAGCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAA--TTTTAAGATATTTTTT--------TT--ATTAT---------GTG-CCGCT---TGTTACGTAACTCCAAGCATCTCAT----ATGGAGGCTG----T---TT-GTATTTATTATTAT--TT-----GASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................ATGAGAAGATGATGAAGGAGACTGT....................................................................................................................................................................................................................................................................................................................................................................2518.008800000
..CACCTCTGACCTTCCTCACCGAG..............................................................................................................................................................................................................................................................................................................................................................................................2314.004400000
.........................GATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2014.004300001
..CACCTCTGACCTTCCTCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................2414.004400000
..........................ATGAGAAGATGATGAAGGAGACT......................................................................................................................................................................................................................................................................................................................................................................2313.003300000
..........................ATGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2113.003111000
..........................ATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1912.002011000
......TCTGACCTTCCTCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.........................GATGAGAAGATGATGAAGGAGACTG.....................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..........................ATGAGAAGATGATGAAGGAGACTGC....................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAGATGATGAAGGAGACTGG....................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
ACCACCGTTGACATATCTCACCGACGATGAGAAGATGATGAAGGAGACGGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................ATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1913.00300300
..................CACCGACGATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2713.00300300
.........................GATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................1912.00200110
..........................ATGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2112.00200200
.........................GATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2012.00200200
..................CACCGACGATGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2612.00200110
..............................GAAGATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................GAAGATGATGAAGGAGACGGT....................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................CACCGACGATGAGAAGATGATGAA.............................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............................GAAGATGATGAAGGAGACG......................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..................CACCGACGATGAGAAGATGATG...............................................................................................................................................................................................................................................................................................................................................................................2211.00101000
................CTCACCGACGATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2911.00100100
.................................GATGATGAAGGAGACGGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2311.00100100
............ATATCTCACCGACGATGAGAAGAT...................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
...........................TGAGAAGATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......TTGACATATCTCACCGACGAT...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................ACGATGAGAAGATGATGAA.............................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.........GACATATCTCACCGACGATGA.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
............................GAGAAGATGATGAAGGAGACGGT....................................................................................................................................................................................................................................................................................................................................................................2311.00101000
........TGACATATCTCACCGACGATGAG........................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.........................GATGAGAAGATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................2311.00100100
............................GAGAAGATGATGAAGGAGAC.......................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................CACCGACGATGAGAAGAT...................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........TGACATATCTCACCGACGATGA.........................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................GAGAAGATGATGAAGGAGACG......................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................TCACCGACGATGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2811.00100100
..................CACCGACGATGAGAAGATG..................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.....................CGACGATGAGAAGATGATGAA.............................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................TGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1811.00100100
...............TCTCACCGACGATGAGAAG.....................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
droVir3
TCCCCCGTTGACATACCTCACCGACGACGAGAAGATGATGAAGGAGACAGGTGAGTCCTGCCA-CTAG-----------GCTATACT-ATATACAATATGTACGCTA-AGCC----CTTGCCT--CTTAAGTTAGCGTGTTTGCAGTC-GG----------------------------------------------------------------------------------------------------------------TGCAC--AAATAA--TTTTTAGATCAGTT----------TTTTTTTGTGTTGCTTTCAACATCGGTTTTTGTTACGTAATT-TAATCATCGCAT----ATTTTAGTA--T-TT---AG-TTATTAATTATTAT--AA-----AASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................CGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................1813.003000000000000011000000000000000000000000000000000000000000001000
............................GAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000010000100000000000000000000000000000000000000000000
...........................CGAGAAGATGATGAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
.........GACATACCTCACCGACGACGAGA.......................................................................................................................................................................................................................................................................................................................................................................................2312.002000100000000000000010000000000000000000000000000000000000000000
........TGACATACCTCACCGACGACGAGA.......................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
........TGACATACCTCACCGACGA............................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............ATACCTCACCGACGACGAGA.......................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
............ATACCTCACCGACGACGAGAA......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
............................GAGAAGATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................GACGACGAGAAGATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.................TCACCGACGACGAGAAGATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................CACCGACGACGAGAAGATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................GCGTGTTTGCAGTC-GG----------------------------------------------------------------------------------------------------------------TGCAC--AAAT.....................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................GAGAAGATGATGAAGGAGACAGT....................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......GTTGACATACCTCACCGACGA............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
............................GAGAAGATGATGAAGGAGACAGGT...................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
.........................GACGAGAAGATGATGAAG............................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........GACATACCTCACCGACGACGAGAAGAT...................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
................................................................................CTATACT-ATATACAATAT....................................................................................................................................................................................................................................................................................................................18110.364000000000000000000000000001000000030000000000000000000000000000
droMoj3
ACCTGCACTAACATTCCTCACCGACGATGAGAAAATGATGAAGGAGACAGGTGAGTC----CTTTGGCTAGATCAGTAGAGTATAGC-ATATATGA-ATATAGACTATAGCCTTCACTTGCCTTTCTTAAG----CAACTTTGTAGTGTGG----------------------------------------------TGCA------------T-A------------------------------------------------------AAATGA--TTTTAAGATAATTTTTTACTTTTTTT--TTTTTTTGTAGTCAACA-TCGGTTTTTGTTACGTAATT-TAATCAACGCATGGGTGTTGTTGTTGTA-GTTGTTG-TTCCTTATTTAT------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................GAGAAAATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................CACCGACGATGAGAAAATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....GCACTAACATTCCTCACCGAC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................CACCGACGATGAGAAAATGAT................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................ATGGGTGTTGTTGTTGTA-GT...............................2011.001100000
..............................GAAAATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....CACTAACATTCCTCACCGACGAT...........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....GCACTAACATTCCTCACCGACGAT...........................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................AAAATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................1811.001100000
......................GACGATGAGAAAATGATGA..............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................AAATGATGAAGGAGACAGT....................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........TAACATTCCTCACCGACGATGA.........................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........AACATTCCTCACCGACGATGA.........................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................CGACGATGAGAAAATGATGAAGG...........................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.................................AATGATGAAGGAGACAGT....................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................CACCGACGATGAGAAAATGATGAAGGA..........................................................................................................................................................................................................................................................................................................................................................................2711.001000001
......ACTAACATTCCTCACCGACGATGAG........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................CGATGAGAAAATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAAATGATGAAGGAGACA......................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droGri2
CCCGCCAATAACTCACCTCACCGACGATGAGAAAATGATGAAGGAGACGGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................CACCGACGATGAGAAAATGATG...............................................................................................................................................................................................................................................................................................................................................................................2211.00101

Generated: 05/18/2015 at 04:13 PM