ID:dsi_13130 |
Coordinate:3r:17242045-17242275 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3r_17242276_17242859_+]; exon [3r_17241639_17242044_+]; exon [3r_17242276_17242859_+]; CDS [3r_17241965_17242044_+]; Antisense to CDS [3r_17241954_17242055_-]; Antisense to five_prime_UTR [3r_17242056_17242153_-]; Antisense to exon [3r_17241954_17242153_-]; intron [3r_17242045_17242275_+]
No Repeatable elements found
| ##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TCAAATATGCGGTCAGTACTTCCGAGGCTCGAGGCTTCAGTAAAAGGCGGGTAAGCTGCATTTTGTATCCAAATATTGCTACTATTGCATCACAAAATAATAACAATTGGTTTTCATGGGTTTTGTTATTATTTTTGCCCTCTTATCGAATCAACAGCTGTTCTGCAATCGATAATGACACATAGTTATCACATCGATAGCAGTAGCGATAGTTCGATAATTGCGCGTAATTTGAAATTATTTTTTGAAAACATATTCTCCAACTTTTAATCTTATTTAAGCCTCGTGCCTGTTAGAAGTACCAGCAAGAGACCCGAGCTATCTGAGCACT **************************************************(((((.((((....(((..(((...))).)))...))))....(((((((((((((................)))))))))))))(((....(((((((((.....((((..((((.((((((.(((((.....)))))...)))))).))))))))....)))))))))....)))...(((((((.....)))))))......................))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|
| ........GCGGTCAGTACTTCCGAGG................................................................................................................................................................................................................................................................................................................ | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .................................GCTCCAGTAAACGGCGG......................................................................................................................................................................................................................................................................................... | 17 | 2 | 7 | 0.71 | 5 | 0 | 5 | 0 | 0 | 0 |
| ...............................................................................................................................................TATCGTATCAAGAGCTGTT......................................................................................................................................................................... | 19 | 2 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................TTATCGTATCAAGAGCTGTT......................................................................................................................................................................... | 20 | 2 | 3 | 0.67 | 2 | 2 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................TTATCGTATCAAGAGCTGTTT........................................................................................................................................................................ | 21 | 3 | 9 | 0.56 | 5 | 5 | 0 | 0 | 0 | 0 |
| .....................................CAGTAAACCGCGGGTAA..................................................................................................................................................................................................................................................................................... | 17 | 2 | 3 | 0.33 | 1 | 0 | 0 | 1 | 0 | 0 |
| ...........GTCAGTACTTTGGAAGCTCG............................................................................................................................................................................................................................................................................................................ | 20 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 |
| ..................................CTCCAGTAAACGGCGG......................................................................................................................................................................................................................................................................................... | 16 | 2 | 20 | 0.25 | 5 | 0 | 5 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................................................................................................................CAGCAAGAGACTCGA.............. | 15 | 1 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................................GTTCTGTAATCGATAA............................................................................................................................................................ | 16 | 1 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................TAACAGCTGGTTTTCATGCG................................................................................................................................................................................................................... | 20 | 3 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 1 |
| ...............................................................................................................................................................................................................................................................................................................AGCAAGAGACTCGAG............. | 15 | 1 | 11 | 0.09 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...............................................................................................................................................TATCGTATCAAGAGCTGTTT........................................................................................................................................................................ | 20 | 3 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| .....................................CAGTAAACGACGGGTA...................................................................................................................................................................................................................................................................................... | 16 | 2 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................................................................................................................................................................ACAGCAAGAGACTCGAG............. | 17 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
| ###############################################################################################################################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AGTTTATACGCCAGTCATGAAGGCTCCGAGCTCCGAAGTCATTTTCCGCCCATTCGACGTAAAACATAGGTTTATAACGATGATAACGTAGTGTTTTATTATTGTTAACCAAAAGTACCCAAAACAATAATAAAAACGGGAGAATAGCTTAGTTGTCGACAAGACGTTAGCTATTACTGTGTATCAATAGTGTAGCTATCGTCATCGCTATCAAGCTATTAACGCGCATTAAACTTTAATAAAAAACTTTTGTATAAGAGGTTGAAAATTAGAATAAATTCGGAGCACGGACAATCTTCATGGTCGTTCTCTGGGCTCGATAGACTCGTGA **************************************************(((((.((((....(((..(((...))).)))...))))....(((((((((((((................)))))))))))))(((....(((((((((.....((((..((((.((((((.(((((.....)))))...)))))).))))))))....)))))))))....)))...(((((((.....)))))))......................))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
M024 male body |
SRR553488 RT_0-2 hours eggs |
M053 female body |
M023 head |
O002 Head |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................AGGTTTATAACGATGATAACGTAGTGT............................................................................................................................................................................................................................................. | 27 | 0 | 1 | 2.00 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ......TTCGCCAGTCATGAAGGCTC................................................................................................................................................................................................................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................AAAGTACCCAAAACAATAA......................................................................................................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........CCAGTCATGAAGGCTCCG............................................................................................................................................................................................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....ATACGCCAGTCATGAAGGCTC................................................................................................................................................................................................................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................AGGGAGGCTCCGAGCTCCGA....................................................................................................................................................................................................................................................................................................... | 20 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................AGGTTTATAACGATGATAACGTAGTGTT............................................................................................................................................................................................................................................ | 28 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....ATACGCCAGTCATGAAGGCT.................................................................................................................................................................................................................................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................CGCCCATTGGACGTAGAAG.......................................................................................................................................................................................................................................................................... | 19 | 3 | 20 | 0.85 | 17 | 0 | 0 | 0 | 6 | 0 | 10 | 1 | 0 | 0 |
| .........................CCGAGCTGCGAAGTC................................................................................................................................................................................................................................................................................................... | 15 | 1 | 4 | 0.75 | 3 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..............................................CGCCCATTGGACGTAGAA........................................................................................................................................................................................................................................................................... | 18 | 2 | 5 | 0.60 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
| ........................TCCGAGCTGCGAAGTC................................................................................................................................................................................................................................................................................................... | 16 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................................AAAAAACTATTGTAGACGAGGT..................................................................... | 22 | 3 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ................................................................................................................................................TAGCTTAGTTGTCTAAAAAACGT.................................................................................................................................................................... | 23 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TCCGAGCTGCGAAGTCG.................................................................................................................................................................................................................................................................................................. | 17 | 2 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ........................TCCGAGCTGCGAAGT.................................................................................................................................................................................................................................................................................................... | 15 | 1 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................AGAAGTCATTTTCCGC.......................................................................................................................................................................................................................................................................................... | 16 | 1 | 8 | 0.13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................TAGGTTTATACCGAGGAGA...................................................................................................................................................................................................................................................... | 19 | 3 | 20 | 0.10 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
| ............................................................................CCGATGATAAAGTAGTG.............................................................................................................................................................................................................................................. | 17 | 2 | 13 | 0.08 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .....................................................................................................................................................................................................................................................................................................................TCTGGGCTAGCTAGAATCG... | 19 | 3 | 13 | 0.08 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................AAATGTAGCCAAAACAAT........................................................................................................................................................................................................... | 18 | 2 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................................................CGAGGCTGAAAATCAGAAT........................................................ | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Generated: 04/23/2015 at 03:38 PM