ID:

dsi_13110

 Coordinate:

3r:17977559-17977708 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.7 -31.5 -31.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGACGGGTTCGCGGCTCTCGGCGCGGCTTCCATTTTTCCGAAAGATACAAGTACTTCCAAGTGAAATAAAGCAATTACATAAAGTCCAAAGAGTGCAGTGCAGTGCCGCGTTGTGAATTCCAGTGCGAAAGTGTAGAAAAAGCCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGCCATTGTATTGCCCACGCACTCACACCAGCACACACACCTTGTCACCTGGAATACCGCAAAATTTGTAAAGAAA
**************************************************..((((....((((..........))))...)))).....((((((.((((((((((((((((.......))))))).....((((((..(((.(((((((......)))).)))...)))))))))....)))))))..))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M025
embryo
 SRR618934
dsim w501 ovaries
 M023
head
 M053
female body
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
....................................................................................................................ATTCCAGTGCGAAAGTGTAGAAA............................................................................................................... 23 0 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................................GTAGAAAAAGCCAATTGACAAAAGC............................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................ACACACCTTGTCACCTGGAA...................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.......TTCGCGGCTCTCGGCGCGGC............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.......TTCGCGGCTCTCGGCGCGAC............................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
.........CGCGGCTCTCGGCGCGGC............................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0
.GACGGGTTCGCGGCTCTC....................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0
......GTTCGCGGCTCTCGGCGC.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0
..................................................................................................................GAATTCCAGTGCGAAAGTGTAGA................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0 0 0
.......TTCGCGGCTCTCGGCG................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0
........TCGACGCTCTCGGCGCGTCT.............................................................................................................................................................................................................................. 20 3 3 0.67 2 0 0 2 0 0 0 0 0
.....GGTTCGCGTCTCTGGGCG................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................GCGCTCACGCCAGCACAGA....................................... 19 3 14 0.07 1 0 0 0 0 0 0 1 0
...............TCTCGGCGCTGCCTCCA.......................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 0 0 0 1 0
...............TCTCGGCCCGACCTCCATT........................................................................................................................................................................................................................ 19 3 18 0.06 1 0 0 0 0 0 0 1 0
.............................................................................................................................CGACCGTGTAGAAAAA............................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCTGCCCAAGCGCCGAGAGCCGCGCCGAAGGTAAAAAGGCTTTCTATGTTCATGAAGGTTCACTTTATTTCGTTAATGTATTTCAGGTTTCTCACGTCACGTCACGGCGCAACACTTAAGGTCACGCTTTCACATCTTTTTCGGTTAACTGTTTTCGCAGTGCAAAAGCGAAAGACGGTAACATAACGGGTGCGTGAGTGTGGTCGTGTGTGTGGAACAGTGGACCTTATGGCGTTTTAAACATTTCTTT
**************************************************..((((....((((..........))))...)))).....((((((.((((((((((((((((.......))))))).....((((((..(((.(((((((......)))).)))...)))))))))....)))))))..))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
...............................................................................................................................................................................................................GTGTGTGGAACAGTGGAC......................... 18 0 1 1.00 1 1 0 0 0 0 0
..................................................................................TCAGGTTTCTCGCGTC........................................................................................................................................................ 16 1 2 0.50 1 0 1 0 0 0 0
.......................................................................................................................GGTCACGCTTCAACATCATTT.............................................................................................................. 21 3 4 0.50 2 0 0 0 2 0 0
........................................................................TTAATGTATTGCAGGT.................................................................................................................................................................. 16 1 5 0.20 1 0 0 0 0 1 0
.................................................................................................................................................TAACTGTTTTCGAAGTGTAAG.................................................................................... 21 3 7 0.14 1 0 0 0 0 0 1
......................................................................CGTGAATGTATTTGAGGT.................................................................................................................................................................. 18 2 9 0.11 1 0 0 1 0 0 0
...........ACCGAGAGCCGCGCAGA.............................................................................................................................................................................................................................. 17 2 9 0.11 1 0 0 1 0 0 0
...............................AAAAAAGGCTTTTTATGTTGAT..................................................................................................................................................................................................... 22 3 9 0.11 1 0 0 1 0 0 0
....................................................................................................................................................CTGGTTTCGCAGTGGAA..................................................................................... 17 2 10 0.10 1 0 0 1 0 0 0
......................................GCTTTCTAAGTCCATGATG................................................................................................................................................................................................. 19 3 13 0.08 1 0 0 1 0 0 0
...........................................................................TTGTATTTCAGGTTTC............................................................................................................................................................... 16 1 14 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................................................GTGAGTGTGGTGGTGTGT....................................... 18 1 20 0.05 1 1 0 0 0 0 0
...................................................................................CAGGTTTCTCAGGGCA....................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:17977509-17977758 - dsi_13110 CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTT------------GTAAAGAAA--
droSec2 scaffold_0:18810001-18810250 - CGACGGGTTCGC---GGCTCACG---GCGCGGCTTCCATTTTTCC------------------GAAAAAAAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------ACAATTGACAAAAGCGTCACGTTTTGGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--AAC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTT------------TTGAAGAAA--
dm3 chr3R:18452083-18452332 - CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCG------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTAT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-AATT------------TTAAAGAAA--
droEre2 scaffold_4820:9623457-9623707 + CGACGGGTTCGC---GGCTCTCG---GCGCGGCTACCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------GCTACCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTTAT--ACA------GGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAGAAATT------------TCAAAGAAA--
droYak3 3R:19300934-19301183 - CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------GGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--T-------GAAA----AAG-------------------------------CCAATTGACAAACGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA------AGCACACACACA----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTG------------TTTAAGAAA--
droEug1 scf7180000409768:581323-581579 - CGTCGGGTTCGC---GGCTCTCC---GTGCGGCTTCCAATTTTCC------------------AAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------TGTGCCGAGT---AGTGAATTTCAGTGCGAAAGTGA--A-------GACA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTATATTT---GCCCACGCACTCAC--ACG------AA----CACACC----------------------------------------T-G-GG----------CCTGGAATACCACA--ATA-AG-AAAAACCTATAAAAAAAAGTAA--
droBia1 scf7180000302402:5267644-5267885 + CGACGGGTTGGC---GGCTCTCC---GCGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACATGC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------CGTGCCGAGC---AGTGAATTCCAGTGCGAAATTGT--A-------GCCA----CAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTTTGC----CATTGCATT----GCCCACGCACTCAC--ACC------AG----CACACC----------------------------------------T-G-GG----------CCTGGAATACCAC---GAA-AT-A------------AAACCGAAA--
droTak1 scf7180000415711:558351-558592 + CGACGGGTTGGC---GGCTCTCC---GCGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTG------CAAAGAGTGAAGT-------GC------GGCGCTGAGT---AGTGAATTCCAGTGCGAAAGTTA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTTTGC----CATTGCCTT----GCCCACGCACTCAC--ACA------AA----CACAC----------------------------------------------------------CTGGAATACCAC---AAA-AT-AAAAACG------AAAACGAAA--
droEle1 scf7180000491280:4301028-4301288 + CGACGGGTTCGC---GGCTCTCG---GTGCGGTTTCCATT-TTCC------------------CAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGTGAAAAGTGC------GGCGCGAAGT---AGCGAATTGCAGTGCGAAAGTTA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA----AAAG----CACACC----------------------------------------T-G-GG-CTTGGAATACTTGGAATACCACT--ATA-AA-A------------CAAAAAAAA--
droRho1 scf7180000779538:548648-548909 + CGACGGGTTCGC---GGCTCTCC---GGTCGGTTTTCATT-TTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGTGAAAAGTGC------GGTGCGGCGT---AGCGAATTCCAGTGCGAGAGTTA--A-------GCTA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA------AA--AACACACC----------------------------------------T-G-GG-CTTTAAATACTTGGAATACCAC---AGA-AA-G------------CAACAGAAAGT
droFic1 scf7180000453826:202390-202627 + CGACGGGTTCGC---GGCTCTCC---GTGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACTTGC------------------CAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------TGTGCCAAGT---AGTGAATTCCAGTGCGAAAGTCA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCAGC----CATTGCATTT---GCCCACGCACTCAC--ACA------AA----CACACC----------------------------------------T-----------------TGGAATTCCGC---AAA-AA-A------------GAAAAGAAA--
droKik1 scf7180000302706:1690590-1690867 - CGGCTGGTACGC---GGCTCTCG---G---GGATTTCTTT-TTCC--------GC--------GAA--ACACCGAGTTACTACT----ATTGCTCGCTCGC-TAGTGA-AATAAAGCAATTAT----------ATAAAGCCCCGGGGCAAAGAGCGAAGTGCGG-----------AGTGCTGAACAAAAGTGAATTCGAGTGCGAAT--AA--A-------G---------CC---AGAGAAAATTAAAGTAAG-CGCCAAAGCGAGTTGACAAAAGCGGCACGTTTTCGCTTTCTGC----CATTGCATT----GCCCACGCA-ACACACAC--------GCAGACACACC----------------------------------------T-TTG-G---------------------C---AAA-AGAC------------GCAAAAAAA--
droAna3 scaffold_13340:21868391-21868724 - CGACTGGACCGCTCTGTCGCTCG---GTGCGGATTTCGGT---GCGGATTGAAGAGCAAAGCGG-----ACA-AAG-TACTACCTAGTATTACTAACAAAATAAGTGAAAATAAAGTCATTAC----------ATAAAGCGC-----CA----GAGAAGC-------GCCAGAGAAGCGC----C---AGTGAAGTCGCGTTCGAAAGCGAGTA-GCTAGTGGAAAAAAAAACACAAAAAAAAAGTAAAGTAAA-------TTCGAGTTGACAAAAGCAGCACGTTTTCGCTTTCTGCTTTGCATTGCATTTTAAACCCACGCACTCAC--ACA------GA--TACACACC------ACTACACGGG------------------CACACCT-TTG-GCAAA----------AATATAAA---AAA----A------------AAAAAAAAA--
droBip1 scf7180000396583:337779-338110 + CGACTGGACCGC--TGTCGCTCTGTGTCGCGGATTTCGTT-GTGC--------GAGCAAACGGG-----AAA-AAG-TACTACCTAGTATTACTAACA--ATAAGTGAAAATAAAGTCATTAC----------ATAAAGCCCCGGA----GAAGCCAA------------AGA----------GC---AGTGAAGTCGCGTTCGAAAGCTAGTA-GCCAGTGAAA----AAGC---AGAAAAAAGTAAAGTAAATCGGCGATTCGAGTTGACAAAAGCAGCACGTTTTCGCTTTCTGCTTTGCATTGCATTTT--GCCCACGCACTCAC--ACA------GA--TACACACC------AACACACGGG---------------TGGCACACCT-TTG-GCAGAATTCGCTTGGAATACCAC---AAA-AA---------------CAAAAGAA--
dp5 2:4146306-4146531 + -------------------------------------------------------------------------------------------------------AATGG-AATGAAGCCATTACTACTCGTCTTATAAAG-C------CAAAGAGCAAA------------AGTTT---A-----C---AGTGAAGTCAGCTCCAACGACTGATGTGATCGTGGAA----AAG-------------------------------TAGAGTGACAAAAAAGGCACGTTTTCGCTTTCT---------TGCATT----AACCACGCACACAC--ACACACACAAA----CACACA--------------CGCAAAAACTTGGCCAATACCACACCTTTTG-GCAGAACCCGCTTGGAATACCAA---AG---------------------AAGAAA--
droPer2 scaffold_7:208575-208775 - -------------------------------------------------------------------------------------------------------AATGG-AATGAAGCCATTACTACTCGTCTTATAAAG-C------CAAAGAGCAAA------------AGTGT---A-----C---AGTGAAGTCCGCTCCAACGACTGATGTGATCGTGGAA----AAG-------------------------------TAGAGTGACAAAAAAGGCACGTTTTCGCTTTCT--------------T----GCACACACACACGC--AAA------AA--------CT------------------------TGGCCAATACCACACCTTTTG-GCAGAACCCGCTTGGAATACCAA---AG---------------------AAGAAA--
droVir3 scaffold_12855:4819275-4819330 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACAAAAGCGGCACGTTTGCGCTTTCT--------------------------CACTCAC--ACACAGACCAGCATACACAC--------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:28321005-28321138 + CGA--------------------------------------------------------------------------------------------------------A-AGTGAAGCA--------------------------------------AA------------AGTGC---A-----C---AGTTAAG--------------------------ATTG----TGT-------------------------------TTTGTTGACAAAAGCGGCACGTTTGCGCTTTCT--------------------------CACTCAC--ACA------TACACACACACGCTTACTAACACACAAG--------------------------------------------CAGAACAGC-GAAAA-TTTC------------GCAAAGCGA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTT------------GTAAAGAAA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................ATTCCAGTGCGAAAGTGT--A-------GAAA----..................................................................................................................................................................................................................................2313.00303000000000000000
.................................................................................................................................................................................................................GT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGC.................................................................................................................................................................................2512.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................ACACACC----------------------------------------T-T-GT--------CACCTGGAA........................................2011.00101000000000000000
.......TTCGC---GGCTCTCG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.........CGC---GGCTCTCG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.GACGGGTTCGC---GGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
......GTTCGC---GGCTCTCG---GCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
...............................................................................................................................................................................................GAATTCCAGTGCGAAAGTGT--A-------GA........................................................................................................................................................................................................................................2311.00100010000000000000
.......TTCGC---GGCTCTCG---GCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000001000000
droSec2
CGACGGGTTCGC---GGCTCACG---GCGCGGCTTCCATTTTTCC------------------GAAAAAAAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------ACAATTGACAAAAGCGTCACGTTTTGGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--AAC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTT------------TTGAAGAAA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......TTCGC---GGCTCACG---GCGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
....GGGTTCGC---GGCTCACG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.......................................................................................................................................................................................................................................................................................TCACGTTTTGGCTTTCTGC----CATT.....................................................................................................................................................2311.0011000
.GACGGGTTCGC---GGCTCACG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..................................................................................................................................................................................................TTCCAGTGCGAAAGTGT--A-------GAAA----A.................................................................................................................................................................................................................................2311.0010100
..........................................................................................................................................GTC------CAAAGAGTGCAGT-------GC------AGT.....................................................................................................................................................................................................................................................................................2111.0010100
...CGGGTTCGC---GGCTCACG---GCGCGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
...................................................................................................................................................................................................................................................................................AGCGTCACGTTTTGGCTTTCTGC----CATT.....................................................................................................................................................2711.0011000
................................................................................................................................................................................................AATTCCAGTGCGAAAGTG.....................................................................................................................................................................................................................................................1811.0010001
....GGGTTCGC---GGCTCACG---GCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.................................................................................................................................................................................................ATTCCAGTGCGAAAGTGT--A-------GA........................................................................................................................................................................................................................................2111.0011000
.....GGTTCGC---GGCTCACG---GCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................CGCGT---TGTGAATTCCAGTGCGAAAGTG.....................................................................................................................................................................................................................................................2711.0010100
.........................................................................................................................................................GTGCAGT-------GC------AGTGCCGCGT---TGTGAA.....................................................................................................................................................................................................................................................................2511.0011000
dm3
CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCG------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------AGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTAT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACC------AGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-AATT------------TTAAAGAAA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.GACGGGTTCGC---GGCTCTCG---GCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100010000000000000010
....GGGTTCGC---GGCTCTCG---GCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000010000000000010000000000000000000000000000000000000000000000000010000000000000000
......GTTCGC---GGCTCTCG---GCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000020000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................T-T-GT--------CACCTGGAATACCGC---A..............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGTTCGC---GGCTCTCG---GCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010001000000000000000000000000000000100000
.GACGGGTTCGC---GGCTCTCG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000
..................................................................AGATAC-AAG-TACTTCG------------------AAGTGA-AATAA.....................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AGTGCCGCGT---TGTGAATTCCAGTGCGA..........................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.......................................................................C-AAG-TACTTCG------------------AAGTGA-AAT.......................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTC------CAAAGAGTGCAGT-------GC------A.......................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000
..ACGGGTTCGC---GGCTCTCG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TAAAGTC------CAAAGAGTGCAGT-------GC------AGT.....................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000
.......................................................................................................................................................................GC------AGTGCCGCGT---TGTGAA.....................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGTTCGC---GGCTCTCG---GCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000
.GACGGGTTCGC---GGCTCTCG---GCGCGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTCCAGTGCGAAAGTAT--A-------GA........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................AAAGAGTGCAGT-------GC------AGTGC...................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AGTAT--A-------GAAA----AAG-------------------------------CCAATTGA........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GCGTCACGTTTTCGCTTTCTGC----C........................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GT-------GC------AGTGCCGCGT---TGTGA......................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................AGTGCCGCGT---TGTGAATTCCAG...............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................TCCATTTTTCC------------------GAAAGATAC-AAG-TA........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGAGTGCAGT-------GC------AGTGCCGCGT---TGTG.......................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................TAC-AAG-TACTTCG------------------AAGTGA-AATAAAG...................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCAC--ACC------AGCACACACACC----------------------------------------...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CATTGTATT----GCCCACGCACTCAC--ACC------AGC................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACG...........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........C---GGCTCTCG---GCGCGGCTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................AGTGA-AATAAAGCAATTA.............................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AAA----AAG-------------------------------CCAATTGACAAAAGC.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................GC------AGTGCCGCGT---TGTGAATTCCA................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................T--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCG................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................AGTGCCGCGT---TGTGAATT...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................CCATTTTTCC------------------GAAAGATAC-AAG-TACT......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.GACGGGTTCGC---GGCTCTCG---GCGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................ATTAC----------ATAAAGTC------CAAAGAGTG...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GACGGGTTCGC---GGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................AGTC------CAAAGAGTGCAGT-------GC------A.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGT-------GC------AGTGCCGCGT---TGTGAATT...................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................CC------------------GAAAGATAC-AAG-TACT......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................TCCATTTTTCC------------------GAAAGATAC-AAG-..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACGCACTCAC--ACC------AGCACACACACC----------------------------------------...............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GAATTCCAGTGCGAAAGTAT--A-------GAA.......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....GGGTTCGC---GGCTCTCG---GCGCGGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGGTTCGC---GGCTCTCG---G............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GAAA----AAG-------------------------------CCAATTGACAAAAG..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................CCAGTGCGAAAGTAT--A-------GAAA----A.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......GTTCGC---GGCTCTCG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.GACGGGTTCGC---GGCTCTCG---GCGCGGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTGCCGCGT---TGTGAATTCC.................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AGTGCCGCGT---TGTGAATTCCAGTGC............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GTAT--A-------GAAA----AAG-------------------------------CCAATT..........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TAC-AAG-TACTTCG------------------AAGTG............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........C---GGCTCTCG---GCGCGGCTTCCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GT-------GC------AGTGCCGCGT---TGTGAAT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................AGAGTGCAGT-------GC------AGTGCCGCGT---TGT........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AG-------------------------------CCAATTGACAAAAGCGTCA.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................ACTTCG------------------AAGTGA-AATAAAG...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AGAGTGCAGT-------GC------AGTGCCGCGT---TG.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CC----------------------------------------T-T-GT--------CACCTGGAATACCGC---...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AAAGAGTGCAGT-------GC------AGTGCC..................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CACACC----------------------------------------T-T-GT--------CACCTGGAATAC.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GAAAGTAT--A-------GAAA----AAG-------------------------------CCA.............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AAG-TACTTCG------------------AAGTGA-AA........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................................................AAAGTC------CAAAGAGTGCAGT-------G...............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................T-------GC------AGTGCCGCGT---TGTGAA.....................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................A-------GAAA----AAG-------------------------------CCAATTGACAAA....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................CACGCACTCAC--ACC------AGCACACACA.........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCCAGTGCGAAAGTAT--A-------G.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................AGTGCAGT-------GC------AGTGCCGCGT---TG.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
CGACGGGTTCGC---GGCTCTCG---ATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................A----AAG-------------------------------CCAATTGACAAAAGCGTCACGTT.........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................CATTTTTCC------------------GAAAGATAC-AAG-..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GT-------GC------AGTGCCGCGT---TGTGAATTCCAG...............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....GGGTTCGC---GGCTCTCG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AATTCCAGTGCGAAAGTA.....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TGACAAAAGCGTCACGTTTTCGCT...................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGGTTCGC---GGCTCTCG---GCGCGGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATTGACAAAAGCGTCACGTT.........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TT----GCCCACGCACTCAC--ACC------AGCACACA...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GACGGGTTCGC---GGCTCTCG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................CTCG---GCGCGGCTTCCATTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
CGACGGGTTCGC---GGCTCTCG---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...............................................................................................................................................................................AGTGCCGCGT---TGTGAATTC..................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGC---GGCTCTCG---GCGCGGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTCGC---GGCTCTCG---GCGCGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GTGCGAAAGTAT--A-------GAAA----GG................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGTTCGC---GGCTCTCG---GCGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGACGGGTTCGC---GGCTCTCG---GCGCGGCTACCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------GCTACCGCGT---TGTGAATTCCAGTGCGAAAGTGT--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTTAT--ACA------GGCACACACACC----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAGAAATT------------TCAAAGAAA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................GT---TGTGAATTCCAGTGCGAAAGT......................................................................................................................................................................................................................................................2312.0020100010
.......................................................................................................................................................................................GT---TGTGAATTCCAGTGCGAAA........................................................................................................................................................................................................................................................2112.0020000200
.......................................................................................................................................AAAGTC------CAAAGAGTGCAGT-------GC------........................................................................................................................................................................................................................................................................................2111.0011000000
.................................................................AAGATAC-AAG-TACTTCC------------------AAGTGA-..........................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................................................................................CACACC----------------------------------------T-T-GT--------CACCTGGAA........................................1911.0010000010
.............................................................................................................................................................................................................................GAAA----AAG-------------------------------CCAATTGACAAAAGCGT...............................................................................................................................................................................2411.0010000100
....................................................................................................................................................................................................................................................................................GCGTCACGTTTTCGCTTTCTGC----.........................................................................................................................................................2211.0011000000
....................................................................................................................................................................................................................................................................................GCGTCACGTTTTCGCTTTCTGC----CATTGT...................................................................................................................................................2811.0011000000
..................................................................................................................................................................................................................T--A-------GAAA----AAG-------------------------------CCAATTGACAAAAGCGT...............................................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................AAAAGCGTCACGTTTTCGCT...................................................................................................................................................................2011.0011000000
..............................................................................................................................................................................................................AGTGT--A-------GAAA----AAG-------------------------------CCAATTGACAAAA...................................................................................................................................................................................2611.0010000100
droYak3
CGACGGGTTCGC---GGCTCTCG---GCGCGGCTTCCATTTTTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------GGTGCCGCGT---TGTGAATTCCAGTGCGAAAGTGT--T-------GAAA----AAG-------------------------------CCAATTGACAAACGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA------AGCACACACACA----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-ATTG------------TTTAAGAAA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................CACACA----------------------------------------T-T-GT--------CACCTGGAATACCGC---AAA-...........................2817.00700000000007
......................................................................................................................ATTAC----------ATAAAGTC------CAAAGAGTGCAGT-------GC------........................................................................................................................................................................................................................................................................................2811.00100000010000
......................................................................................................................................................................................................................................................................................GTCACGTTTTCGCTTTCTGC----CATTGT...................................................................................................................................................2611.00101000000000
...............................................................................................................................................................................................GAATTCCAGTGCGAAAGTGT--T-------GAA.......................................................................................................................................................................................................................................2411.00100000010000
.........................................TTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGT.............................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................................................................................................................TGTGAATTCCAGTGCGAAAGTGT--T-------..........................................................................................................................................................................................................................................2411.00101000000000
.GACGGGTTCGC---GGCTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
.............................................................................................................................................................................................GTGAATTCCAGTGCGAAAGT......................................................................................................................................................................................................................................................2011.00100000010000
............................................................................................................................................................................................TGTGAATTCCAGTGCGAAAGTGT--T-------GAAA----..................................................................................................................................................................................................................................2811.00100000010000
...CGGGTTCGC---GGCTCTCG---GCGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................GT---TGTGAATTCCAGTGCGAA.........................................................................................................................................................................................................................................................2011.00100000010000
droEug1
CGTCGGGTTCGC---GGCTCTCC---GTGCGGCTTCCAATTTTCC------------------AAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------TGTGCCGAGT---AGTGAATTTCAGTGCGAAAGTGA--A-------GACA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTATATTT---GCCCACGCACTCAC--ACG------AA----CACACC----------------------------------------T-G-GG----------CCTGGAATACCACA--ATA-AG-AAAAACCTATAAAAAAAAGTAA--SizeHit CountTotal NormTotal
No Reads
droBia1
CGACGGGTTGGC---GGCTCTCC---GCGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACATGC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------CGTGCCGAGC---AGTGAATTCCAGTGCGAAATTGT--A-------GCCA----CAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTTTGC----CATTGCATT----GCCCACGCACTCAC--ACC------AG----CACACC----------------------------------------T-G-GG----------CCTGGAATACCAC---GAA-AT-A------------AAACCGAAA--SizeHit CountTotal NormTotal
No Reads
droTak1
CGACGGGTTGGC---GGCTCTCC---GCGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTG------CAAAGAGTGAAGT-------GC------GGCGCTGAGT---AGTGAATTCCAGTGCGAAAGTTA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTTTGC----CATTGCCTT----GCCCACGCACTCAC--ACA------AA----CACAC----------------------------------------------------------CTGGAATACCAC---AAA-AT-AAAAACG------AAAACGAAA--SizeHit CountTotal NormTotal
No Reads
droEle1
CGACGGGTTCGC---GGCTCTCG---GTGCGGTTTCCATT-TTCC------------------CAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGTGAAAAGTGC------GGCGCGAAGT---AGCGAATTGCAGTGCGAAAGTTA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA----AAAG----CACACC----------------------------------------T-G-GG-CTTGGAATACTTGGAATACCACT--ATA-AA-A------------CAAAAAAAA--SizeHit CountTotal NormTotal
No Reads
droRho1
CGACGGGTTCGC---GGCTCTCC---GGTCGGTTTTCATT-TTCC------------------GAAAGATAC-AAG-TACTTCC------------------AAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGTGAAAAGTGC------GGTGCGGCGT---AGCGAATTCCAGTGCGAGAGTTA--A-------GCTA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCTGC----CATTGTATT----GCCCACGCACTCAC--ACA------AA--AACACACC----------------------------------------T-G-GG-CTTTAAATACTTGGAATACCAC---AGA-AA-G------------CAACAGAAAGTSizeHit CountTotal NormTotal
No Reads
droFic1
CGACGGGTTCGC---GGCTCTCC---GTGCGGTTTCCATT-TTCC------------------GAAAGATAC-AAG-TACTTGC------------------CAGTGA-AATAAAGCAATTAC----------ATAAAGTC------CAAAGAGTGAAGT-------GC------TGTGCCAAGT---AGTGAATTCCAGTGCGAAAGTCA--A-------GCCA----AAG-------------------------------CCAGTTGACAAAAGCGTCACGTTTTCGCTTTCAGC----CATTGCATTT---GCCCACGCACTCAC--ACA------AA----CACACC----------------------------------------T-----------------TGGAATTCCGC---AAA-AA-A------------GAAAAGAAA--SizeHit CountTotal NormTotal
No Reads
droKik1
CGGCTGGTACGC---GGCTCTCG---G---GGATTTCTTT-TTCC--------GC--------GAA--ACACCGAGTTACTACT----ATTGCTCGCTCGC-TAGTGA-AATAAAGCAATTAT----------ATAAAGCCCCGGGGCAAAGAGCGAAGTGCGG-----------AGTGCTGAACAAAAGTGAATTCGAGTGCGAAT--AA--A-------G---------CC---AGAGAAAATTAAAGTAAG-CGCCAAAGCGAGTTGACAAAAGCGGCACGTTTTCGCTTTCTGC----CATTGCATT----GCCCACGCA-ACACACAC--------GCAGACACACC----------------------------------------T-TTG-G---------------------C---AAA-AGAC------------GCAAAAAAA--SizeHit CountTotal NormTotal
No Reads
droAna3
CGACTGGACCGCTCTGTCGCTCG---GTGCGGATTTCGGT---GCGGATTGAAGAGCAAAGCGG-----ACA-AAG-TACTACCTAGTATTACTAACAAAATAAGTGAAAATAAAGTCATTAC----------ATAAAGCGC-----CA----GAGAAGC-------GCCAGAGAAGCGC----C---AGTGAAGTCGCGTTCGAAAGCGAGTA-GCTAGTGGAAAAAAAAACACAAAAAAAAAGTAAAGTAAA-------TTCGAGTTGACAAAAGCAGCACGTTTTCGCTTTCTGCTTTGCATTGCATTTTAAACCCACGCACTCAC--ACA------GA--TACACACC------ACTACACGGG------------------CACACCT-TTG-GCAAA----------AATATAAA---AAA----A------------AAAAAAAAA--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................AGCAAAGCGG-----ACA-AAG-TACT......................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.......................................................................................................................................................................................................................................................................................................................................................................CTACACGGG------------------CACACCT-TTG-GCA......................................................2211.001100000
............................................................................................................................................................................................AGTGAAGTCGCGTTCGAAAG.......................................................................................................................................................................................................................................................2011.001100000
CGACTGGACCGCTCTGTCGCTCG---GTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................GCGG-----ACA-AAG-TACTACCTAGTATTAC..........................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................................................................................................................................................TACACGGG------------------CACACCT-TTG-G........................................................1911.001000010
...............................................................................................................................................................................AGCGC----C---AGTGAAGTCGCGTTCGAAA........................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................GTAAAGTAAA-------TTCGAGTTGACAAAAGC.................................................................................................................................................................................2711.001000010
.....................................................GAGCAAAGCGG-----ACA-AAG-T.........................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................TG-GCAAA----------AATATAAA---AAA----A------------C..........2050.201010000
droBip1
CGACTGGACCGC--TGTCGCTCTGTGTCGCGGATTTCGTT-GTGC--------GAGCAAACGGG-----AAA-AAG-TACTACCTAGTATTACTAACA--ATAAGTGAAAATAAAGTCATTAC----------ATAAAGCCCCGGA----GAAGCCAA------------AGA----------GC---AGTGAAGTCGCGTTCGAAAGCTAGTA-GCCAGTGAAA----AAGC---AGAAAAAAGTAAAGTAAATCGGCGATTCGAGTTGACAAAAGCAGCACGTTTTCGCTTTCTGCTTTGCATTGCATTTT--GCCCACGCACTCAC--ACA------GA--TACACACC------AACACACGGG---------------TGGCACACCT-TTG-GCAGAATTCGCTTGGAATACCAC---AAA-AA---------------CAAAAGAA--SizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------AATGG-AATGAAGCCATTACTACTCGTCTTATAAAG-C------CAAAGAGCAAA------------AGTTT---A-----C---AGTGAAGTCAGCTCCAACGACTGATGTGATCGTGGAA----AAG-------------------------------TAGAGTGACAAAAAAGGCACGTTTTCGCTTTCT---------TGCATT----AACCACGCACACAC--ACACACACAAA----CACACA--------------CGCAAAAACTTGGCCAATACCACACCTTTTG-GCAGAACCCGCTTGGAATACCAA---AG---------------------AAGAAA--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................GATGTGATCGTGGAA----AAG-------------------------------TAGA............................................................................................................................................................................................2212.0020000002000
....................................................................................................................................................................................................CAGCTCCAACGACTGATGTGATCGT..........................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................CATTACTACTCGTCTTATAAAG-C------....................................................................................................................................................................................................................................................................................................................2311.0010000100000
..........................................................................................................................................................................AGTTT---A-----C---AGTGAAGTCAGCTCCAACGAC......................................................................................................................................................................................................................................................2811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTG-GCAGAACCCGCTTGG..........................................1911.0010100000000
................................................................................................................GAAGCCATTACTACTCGTCT...................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ACACCTTTTG-GCAGAACCCGC..............................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................CACACAAA----CACACA--------------CGCAAG...................................................................................20200.0510100000000
droPer2
-------------------------------------------------------------------------------------------------------AATGG-AATGAAGCCATTACTACTCGTCTTATAAAG-C------CAAAGAGCAAA------------AGTGT---A-----C---AGTGAAGTCCGCTCCAACGACTGATGTGATCGTGGAA----AAG-------------------------------TAGAGTGACAAAAAAGGCACGTTTTCGCTTTCT--------------T----GCACACACACACGC--AAA------AA--------CT------------------------TGGCCAATACCACACCTTTTG-GCAGAACCCGCTTGGAATACCAA---AG---------------------AAGAAA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................GATCGTGGAA----AAG-------------------------------TAGAGTGA........................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................GT---A-----C---AGTGAAGTCCGCTCCAA..........................................................................................................................................................................................................................................................2111.001001000
droVir3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACAAAAGCGGCACGTTTGCGCTTTCT--------------------------CACTCAC--ACACAGACCAGCATACACAC--------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CGA--------------------------------------------------------------------------------------------------------A-AGTGAAGCA--------------------------------------AA------------AGTGC---A-----C---AGTTAAG--------------------------ATTG----TGT-------------------------------TTTGTTGACAAAAGCGGCACGTTTGCGCTTTCT--------------------------CACTCAC--ACA------TACACACACACGCTTACTAACACACAAG--------------------------------------------CAGAACAGC-GAAAA-TTTC------------GCAAAGCGA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................CAC--ACA------TACACACACACGC......................................................................................................19200.102200000

Generated: 05/18/2015 at 06:46 PM