ID:dsi_13103 |
Coordinate:3r:10066370-10066428 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3r_10066275_10066369_-]; CDS [3r_10066275_10066369_-]; CDS [3r_10066429_10066964_-]; exon [3r_10066429_10066964_-]; intron [3r_10066370_10066428_-]
No Repeatable elements found
| ##################################################-----------------------------------------------------------################################################## ACTGCACGCCGCCCTCTTCCAGAACATCTTTCCCAGACCTTTTTGCAAAGGTATGTACAGGTGTATACTTTCATGGAGTAGTTCTTACTTACATCTATACCCCTTTCAGAGAATGAAAAACCGGAGGCTAAGCAAAAGCGTCTTGAAGCCCAGTTTGCC **************************************************....(((.(((((((((((((...)))))).........))))))).))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
M023 head |
M025 embryo |
O002 Head |
|---|---|---|---|---|---|---|---|---|---|
| ACTGCACGCCGCCCTCTTCCAGAACATC................................................................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| .....................................................................................................................................AAAAGCGTCTTGAAGCCCAGTT.... | 22 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 |
| ............................................................................................ATCTCTACCCCTTTCAGAGA............................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...................CAGAACATCTTTCCCAGACCT....................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| .........................................................................................................AAAGAGAATGAAAAACCGGA.................................. | 20 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
|
TGACGTGCGGCGGGAGAAGGTCTTGTAGAAAGGGTCTGGAAAAACGTTTCCATACATGTCCACATATGAAAGTACCTCATCAAGAATGAATGTAGATATGGGGAAAGTCTCTTACTTTTTGGCCTCCGATTCGTTTTCGCAGAACTTCGGGTCAAACGG
**************************************************....(((.(((((((((((((...)))))).........))))))).))).........************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
GSM343915 embryo |
SRR553488 RT_0-2 hours eggs |
M023 head |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................ATCAAGTATGAATGT.................................................................. | 15 | 1 | 11 | 14.55 | 160 | 80 | 59 | 0 | 19 | 0 | 0 | 0 | 2 |
| ..........CGGGAGAAGGTCTTGTAGAAA................................................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................TTGTAGAAAGGGACTGTAATAAC.................................................................................................................. | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ........................................................................................................................................TCGCAGAACTTCGGGTCAAA... | 20 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ......................TTGTAGAAAGGGTCTGTCATAAC.................................................................................................................. | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................AAGAATGAATAAAGAGATGGGGA....................................................... | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................CGTCTTCGCAGAAGATCGGGT....... | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..............................TGGGTCTGGAAAGCCGTTTC............................................................................................................. | 20 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................TAGGGGCAAAGTCTCTTA............................................. | 18 | 2 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................................................................................................................................TTCCCAGAACTTCGG......... | 15 | 1 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................AGAAAGGGGCTGGCAAAAT.................................................................................................................. | 19 | 3 | 17 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................TAATCAAGTATGAATGT.................................................................. | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:24 AM