ID:

dsi_1308

 Coordinate:

node_5767:2892-3041 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.4 -13.2 -12.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron+
DNAREP1_DMRCHelitron-
PROTOPDNAP+

Sense Strand Reads

TATATTTTTATAAGTCTTGAGAATTTCTATCGATTTGACAAAAAAAATTTGCAACACCCACACTTTTGATATGTTTTAATTTTTCTTCGTTTCATGGCTTGTCTTCCCAATTTCTATCGGTATACCAAAAACATATGACCCATGTGTCAAAACTTGCGCAACGTCTATGTCTCTAAAATCGATGATGCTTGATACCAAAGACACTTGCATAACAGGATGCGTAACGCCACGCAATTTTTTGGCCGTGGCT
****************************************************************************************************************..(((((((.........(((((.(((...(((((........)))))..)))))))).......)))))))..**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
................................................................................................................................................................................................TACCAAAGACACTTGCATAACAGGA................................. 25 0 1 2.00 2 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................ACGCAATTTTTTGGCCGT.... 18 0 2 1.00 2 2 0 0 0 0 0 0
................................................................................................................TCTATCGGTATACCAAAAACATATGAC............................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................TAAAATCGATGATGCTTGATACCAAAGA................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................TGTGTCAAAACTTGCGCAACGTC..................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................GCATAACAGGATGCGTAA.......................... 18 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TGATACCAAAGACACTTGCATAACAGGA................................. 28 0 1 1.00 1 0 1 0 0 0 0 0
......TTTATAAGTCTTGAGAATTTCTATCGA......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AACAGGATGCGTAACGCCACGCA................. 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TGTCTCTAAAATCGATGAT................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TGTCTCTAAAATCGATGATGCTTGA.......................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AACAGGATGCGTAACGCCACG................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................CCCATGTGTCAAAACTTG.............................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0
.........................................................................TTTTAATTTTTCTTCGTTTCATGGCT....................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0
.......ATATAAGTCTTGAGAATTTCTATCGA......................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TGCATAACAGGATGCGTAACGCCA..................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CGCAATTTTTTGGCCGT.... 17 0 2 0.50 1 1 0 0 0 0 0 0
.........................GCTATCGATTTGACAAAAAAAATT......................................................................................................................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................AATTTTTTGGCCGTGGC. 17 0 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................ATAATAGGATGAGTAACGCCAA.................... 22 3 3 0.33 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................................AACAGGATGCGTAAC......................... 15 0 6 0.33 2 2 0 0 0 0 0 0
...............................................................................................GGTTTGTCTTCCCAATTTCTATCGATA................................................................................................................................ 27 2 4 0.25 1 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................................TTTTTTGGCCGTGGC. 15 0 20 0.15 3 3 0 0 0 0 0 0
..................................................................................................................................................................................................................AACAGGATGCGTAACC........................ 16 1 9 0.11 1 1 0 0 0 0 0 0
................................................................................................................TCTATCGGTATACCAAAAACA..................................................................................................................... 21 0 19 0.11 2 0 0 0 0 0 2 0
....................................................................................................................................................................................................ATTGACACTTGCATAACA.................................... 18 2 10 0.10 1 0 0 0 1 0 0 0
...........................................................................................................CAATTTCTATCGGTATACCAAAAACA..................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................AACAGGATGCGTAACT........................ 16 1 16 0.06 1 1 0 0 0 0 0 0
...............................................................................................................TTCTATCGGTATACCA........................................................................................................................... 16 0 20 0.05 1 1 0 0 0 0 0 0
.............................................................................................................ATTTCTATCGGTATACCAAAA........................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................ATTTTTTGGCCGTGGCT 17 0 20 0.05 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................AACAGGATGCGTAACGCCAT.................... 20 1 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

ATATAAAAATATTCAGAACTCTTAAAGATAGCTAAACTGTTTTTTTTAAACGTTGTGGGTGTGAAAACTATACAAAATTAAAAAGAAGCAAAGTACCGAACAGAAGGGTTAAAGATAGCCATATGGTTTTTGTATACTGGGTACACAGTTTTGAACGCGTTGCAGATACAGAGATTTTAGCTACTACGAACTATGGTTTCTGTGAACGTATTGTCCTACGCATTGCGGTGCGTTAAAAAACCGGCACCGA
****************************************************************..(((((((.........(((((.(((...(((((........)))))..)))))))).......)))))))..**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR902009
testis
 M053
female body
........................................................................................................AGGGTTAAAGATAGCCATATGGTTTTTGT..................................................................................................................... 29 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0
........................................................................................................AGGGTTAAAGATAGCCATATGGTTTT........................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TAAAGATAGCCATATGGTTTTTGT..................................................................................................................... 24 0 18 1.06 19 4 1 7 2 0 0 5 0 0 0
................................................................................................................................................................TGCAGATACAGAGATTTTAGCTA................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................AAGGGTTAAAGATAGCC.................................................................................................................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AGCTACTACGAACTATGGTTTCTGTGA............................................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................ATACTGGGTACACAGTTT................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGATTTTAGCTACTACGAACTATGGTTT................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GCATTGCGGTGCGTTA............... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................ATACAGAGATTTTAGCTACTACGAACTAT........................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................ATGGTTTCTGTGAACGTATTGTCCTAC............................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................AGAAGCAAAGTACCGAACAGAAGGGT............................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................TTAAACGTTGTGGGTGT............................................................................................................................................................................................ 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TGCAGATACAGAGATTTTAGCTACTA................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................CCGAACAGAAGGGTTAAAGATAGC................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................AAGGGTTAAAGATAGCCATATGGTTT......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TGCAGATACAGAGATTTTAGCTACTACG.............................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................AGGGTAAAAGATAGCCACATGGTCTT........................................................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TGGTTTCTGTGAACGTATTGTCCTAC............................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................AATGCAGATACAGAGATTTTAGCTACT................................................................. 27 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................................................................................CAAAGTACCGAACAGAAGGGTTAAAGAT...................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TGCAGATACAGAGATTTTAGCTACT................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................TTTGAACGCGTTGCAGATACAGAGATT.......................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................CCATATGGTTTCTGGAAACT................................................................................................................ 20 3 12 0.92 11 0 11 0 0 0 0 0 0 0 0
.............................................................................................................TAAAGATAGCCATATGGTTT......................................................................................................................... 20 0 20 0.75 15 0 0 0 0 0 0 0 15 0 0
.......................................................................................................................................ACTGCGTACACAGTTGTG................................................................................................. 18 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.............................................................................TTAAAAAGACGCCAAGTACC......................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 1 0
.............................................................................................................TAAAGATAGCCATATGGTTTTTGTA.................................................................................................................... 25 0 6 0.33 2 0 0 0 1 0 0 1 0 0 0
.........................................................................................................GGGTTAAAGATAGCCATATGGTTTT........................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................AGGGTTAAAGATAGC................................................................................................................................... 15 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
....AAAAAAATTCAGAACT...................................................................................................................................................................................................................................... 16 1 15 0.20 3 0 2 1 0 0 0 0 0 0 0
.............................................................................................................TAAAGATGGCCATATGGTTTTTGT..................................................................................................................... 24 1 20 0.15 3 0 0 1 0 0 0 2 0 0 0
..........................................................................................................GGTTAAAGATAGCCATATGGT........................................................................................................................... 21 0 16 0.13 2 0 0 0 0 0 0 0 0 0 2
.....................................................................................................AGAATGGTTAAAGATAGCCAT................................................................................................................................ 21 1 16 0.13 2 0 1 1 0 0 0 0 0 0 0
..........................................................................................................GGTTAAAGATAGCCATATGGTT.......................................................................................................................... 22 0 16 0.13 2 0 1 1 0 0 0 0 0 0 0
..............................................................................................................AAAGATAGCCATATGGTTTTTGT..................................................................................................................... 23 0 19 0.11 2 0 0 0 1 0 0 1 0 0 0
.........................AGATAGCTAAACTGTT................................................................................................................................................................................................................. 16 0 10 0.10 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................GTTAAAGATAGCCATATGGTTTTTGT..................................................................................................................... 26 0 15 0.07 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................ATATGGCTTTTGTAGACT................................................................................................................ 18 2 15 0.07 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................GGTTAAAGATAGCCATATGGTTTT........................................................................................................................ 24 0 16 0.06 1 0 0 1 0 0 0 0 0 0 0
.....................TTAAAGATAGCTGAACTGTT................................................................................................................................................................................................................. 20 1 16 0.06 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................TTAAAGATAGCCATATGGTTTTTGT..................................................................................................................... 25 0 17 0.06 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................AGAATGGTTAAAGATAGCCA................................................................................................................................. 20 1 18 0.06 1 0 0 1 0 0 0 0 0 0 0
...................TCTTAAAGATAGCTGAACGGTTTTT.............................................................................................................................................................................................................. 25 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................AGATAGCCATATGGTTTTTGT..................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGATAGCCATATGGTTTTTGT..................................................................................................................... 22 0 19 0.05 1 0 0 0 0 0 0 1 0 0 0
...........................................................................................................GTTAAAGATAGCCATATGGTTT......................................................................................................................... 22 0 19 0.05 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................AGATAGCCATATGGTTTT........................................................................................................................ 18 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
..........................................................................................................GGTTAAAGATGGCCATATGGTTTT........................................................................................................................ 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................ACGTACTATGGCTTCTGTA.............................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TAAAGATAGCCATATGG............................................................................................................................ 17 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................CATATGGTTTCTGGAAACT................................................................................................................ 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................TTAAAGATGGCCATATGGTTTTTGT..................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_5767:2842-3091 + dsi_1308 TATATTTTTATAAGTCTT-----------------------------------------------------------------GAGAATTTCT-----------ATCGATTTGACAA------AAAAAATTTGCAACAC----------------------------------------------------------------------------CCACACTTTTGAT--ATGTTTTAATTTTTCTTCGTTTCATGGCTTGTCTTCCCAATTTCTATCGGTATACCAAAAACATATGACCCATGTG-----------------------------------------------TC------------------------------------------------------------------------------------------------------------------AAA-------------ACTTGCGCAACGTCTATGTCTCTAAAATCGATGATGCTTGATACCAAAGACACTTGCATAACAGGATGCGTAACG-CCACGCAATTTTTT---------------GGCCGTGGCT
droSec2 scaffold_112:1801-2026 - GTCTT------------------------------------------------------------------------------GAGAATTTCT-----------ATCGATTTGTGAA------AAAAAATTTGCCACAC----------------------------------------------------------------------------CCACACTTTTGAA--ATGTTTTAATT-TTCTTCGTTTCATGGCTTGTCTTCCCAATTTCTATCGGTATACCAAAAACATTGGTCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGCGCAGCGTCTATGTCTGTAAAATCGATGATGCTTGATACCAAAGACACTTGAATAACAAGATGCGTAACG-CCACGCGATTTTTT---------------GGCCGTGGCT
dm3 chrUextra:14487882-14488175 + CATAATTCTTATTAT---------------------------------------------------------------------------TTTCTCCAATATCTATTGATATGTCAG-----------------------------------------------------------------------------------AACTCTTTATTTTATTATTATTTTAAAA--ATGTTTTGATTTTTCTTCGTTTTATTGTTTGTCTTGCCAATTTCTATCGGTGT------------------------------------------------------------------------------------TTGCATTTCCACTAGCTGA---------------TAGTCGGGGAACTCGACTAAAGCATTCTCTCTTGAGTTCTTATCATG----AACAAACATATCATTAA---GGTACTAAAGTATAATTGCACTGGTTCTTTATGT------------------ATTACCAAAGACACTAGAATAACAAGATGCGTAACGGCCATACATTGGTTTGGC----------------------
droEre2 scaffold_4770:14385033-14385268 + TATATCTCTAAATGTTTCTGGCGCGATTCTCTAAAAATCTGCATTTAAATTTAGAAATCTTTTTTTTTTAAATTTTGTT--------------CCCCAATTTTTACTGATATTTCAG-----------------------------------------------------------------------------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------------TTGAAATTTCTCGTTTGCACTTCTACTAGCTGAGTAACGGGTGTCTGATAGTCGGGGAACTTGACTATA--------------------------------------------------------------------------------------------------GCATTGTATCAAAGACACTAGAATAATAAGATGCGTAACGGCCATACATTGGTTTTGC----------------------
droYak3 v2_chrUn_6986:4549-4857 - CATAGTTTTATTAGTCTT-----------------------------------------------------------------GTAAATTTCT-----------ATCGATTTGTCAAA-----AAACTTTTTGCCACGCCCACTCTAACGCCCACAAACCGCCCAAAGCTGCTACTCCCAAACTTTTGAA------------------------------------AA--GTGTTTTGATATGTTTTCATTTTTGTATTAGTCTTGTAAAATTCTATCGATTTGCCAAAAAACTTTCTGCCACG--------------CCCAATATTACGCCTACAAACCGCCGAAAACTGTGTTTAAGACTCTCCTTCTCCCTTCCACTAGCTGAGTAACG----------------------------------------------------------------------------------------------------------------------------------------GCAAAGACATTATAATAACAAGATGCGTAACGGCCATACATTGGTTTTGC----------------------
droEug1 scf7180000409753:5077-5144 + ACCTTGT----------------------------------------------------------------------------------------------------------------------ATATTTT--------------------------------------------------GTATTGTA---------------------------------------TT--T------------------TTGTATTTTTTTTTTCAATATCTATCGATTTACCAAAGATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301585:109450-109601 - TGCTAAA-----------------------------------------------AAATTTCTTTTTGCTAAAACGTATGCCTCATTAATACCT-----------ATAGATTCACCCAA-----AAAAAAATTGCCACGCCCA-------------AAACCGCCCAAA---------------------------------------------------------------A--CTGTCGTTTTTTTTCTTGC---TATTTGTCTCATTAAAACCTTTCGATTGACCTAAAAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droTak1 scf7180000415454:33078-33234 - TTTGTC-----------------------------------------------------------------------------------------------------AGTTTGTCCAAAACATGTTTTTTAT--------------------------------------------------GTTTTGAA---------------------------------------AA--T------------------TTGATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTCA-TCACATCGA------TATAAAAAA------------------CTTTTGT------------------TCTACCAAAGACATTAGAATATGAAGATGGATAACG-CCATACGATTTTTTTGCACACAATTATTTGGTGCTGGCT
droEle1 scf7180000491352:5388-5466 + CTTGAG--------------------------------------------------------------------------------AGTTTGT-----------ATTTTTTTGCCA-------------------ATAC----------------------------------------------------------------------------TAATATTTTTGAT--ACATTTTAATTTTAGCTTA---------TTGCCTGCCGAATTTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770812:18151-18229 - AATATTTTTAAAATTATT-----------------------------------------------------------------AA--------ATTAAATATATATTTATTT-------------------------------------------------------------------------TTAAAAATTTTTTGGAAAATG--------------------------------------------------------------------------------TAAGATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------AGC--TATTC
droKik1 scf7180000301874:1217-1296 - TACATTTTGAAAATT---------------------------------------------------------------------------TTTGACTA-----------AATT------------------------------------------------------------------------TTTAAAATTTGTCTGAATTTTTAACATTTTTTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTT---------------ATTTTTATTT
droAna3 scaffold_13034:713502-713553 - TCGATTTTTTGAGAACTT-----------------------------------------------------------------GAGGATTTTT-----------AAGAAACCTTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAA-----------------------------------------------ATT
droBip1 scf7180000394882:3708-3761 - ATTAAATTTGTAACACTT-----------------------------------------------------------------GTCAAATTAT-----------AGAAATAAAA---------CTAAACTTCACAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droWil2 scf2_1100000006655:1191-1300 - CAAAA------------------------------------------------------------------------------------------------------------------------AAAATTTGAAAAGT----------------------------------------------------------------------------CAAAAAAAAAAAAAAA--TTTTTTTTTTT------------------TTTTTCTTTTTCTTTCTGGATACCAAAAGCTTGTGATATATTTA-----------------------------------------------TT------------------------------------------------------------------------------------------------------------------AAA-------------TACTGAACAAATT----------------------------------------------------------------------------------------------------CT
droVir3 scaffold_12963:7072363-7072443 - AATATTCTGTAG------------------------------------------------------------------------AAAATTTCATGCTG------ATCGGTTAAGAAA------CACGTGTTTGCGGCAC----------------------------------------------------------------------------CAGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTG----------------------------AAGCAT------------------------------------------------TA---------------------TAATT
droMoj3 scaffold_6540:2269044-2269144 + AATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGATATACCAAACACATACCACATGTGTATCGTTTTGAAAT----------------------------------------------------------------------------------------------------------------------------------GAAA-------ATACCGAT--AAG-------------CAT---------TCAACATCCCTAAAATTAA-GCTGCTTGG---------------------------------------------------------------------TAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATATTTTTATAAGTCTT-----------------------------------------------------------------GAGAATTTCT-----------ATCGATTTGACAA------AAAAAATTTGCAACAC----------------------------------------------------------------------------CCACACTTTTGAT--ATGTTTTAATTTTTCTTCGTTTCATGGCTTGTCTTCCCAATTTCTATCGGTATACCAAAAACATATGACCCATGTG-----------------------------------------------TC------------------------------------------------------------------------------------------------------------------AAA-------------ACTTGCGCAACGTCTATGTCTCTAAAATCGATGATGCTTGATACCAAAGACACTTGCATAACAGGATGCGTAACG-CCACGCAATTTTTT---------------GGCCGTGGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAGACACTTGCATAACAGGA.................................................2512.00200000010001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAATTTTTT---------------GGCCGT....1821.00200000000002000000
................................................................................................................................................................................................................................................................................TCTATCGGTATACCAAAAACATATGAC.............................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCGATGATGCTTGATACCAAAGA.................................................................2811.00100000001000000000
..............................................................................................................................................................................................................................................................................................................TGTG-----------------------------------------------TC------------------------------------------------------------------------------------------------------------------AAA-------------ACTTGCGCAACGTC.....................................................................................................2311.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATAACAGGATGCGTAA..........................................1811.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATACCAAAGACACTTGCATAACAGGA.................................................2811.00100000010000000000
......TTTATAAGTCTT-----------------------------------------------------------------GAGAATTTCT-----------ATCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAACG-CCACGCA................................2311.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAAAATCGATGAT................................................................................1911.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAAAATCGATGATGCTTGA..........................................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAACG-CCACG..................................2111.00100000000001000000
..........................................................................................................................................................................................................................................................................................................CCCATGTG-----------------------------------------------TC------------------------------------------------------------------------------------------------------------------AAA-------------ACTTG..............................................................................................................1811.00101000000000000000
.........................................................................................................................................................................................................................................TTTTAATTTTTCTTCGTTTCATGGCT.....................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATAACAGGATGCGTAACG-CCA....................................2411.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAATTTTTT---------------GGCCGT....1720.50100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTTT---------------GGCCGTGGC.1730.33100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAAC.........................................1560.33200000000002000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTT---------------GGCCGTGGC.15200.15300000000003000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAACC-.......................................1690.11100000000001000000
................................................................................................................................................................................................................................................................................TCTATCGGTATACCAAAAACA...................................................................................................................................................................................................................................................................................................................21190.11200000000200000000
...........................................................................................................................................................................................................................................................................CAATTTCTATCGGTATACCAAAAACA...................................................................................................................................................................................................................................................................................................................26150.07100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAACT-.......................................16160.06100000000001000000
...............................................................................................................................................................................................................................................................................TTCTATCGGTATACCA.........................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
.............................................................................................................................................................................................................................................................................ATTTCTATCGGTATACCAAAA......................................................................................................................................................................................................................................................................................................................21200.05100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTT---------------GGCCGTGGCT17200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGATGCGTAACG-CCAT...................................20200.05100000000001000000
droSec2
GTCTT------------------------------------------------------------------------------GAGAATTTCT-----------ATCGATTTGTGAA------AAAAAATTTGCCACAC----------------------------------------------------------------------------CCACACTTTTGAA--ATGTTTTAATT-TTCTTCGTTTCATGGCTTGTCTTCCCAATTTCTATCGGTATACCAAAAACATTGGTCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGCGCAGCGTCTATGTCTGTAAAATCGATGATGCTTGATACCAAAGACACTTGAATAACAAGATGCGTAACG-CCACGCGATTTTTT---------------GGCCGTGGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATACCAAAGACACTTGAATAACAAG..................................................2711.0011000
.......................................................................................................................................................................................................................................TGTTTTAATT-TTCTTCGTTTCATGGC......................................................................................................................................................................................................................................................................................................................................................2611.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAATCGATGATGCTT............................................................................1811.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACG-CCACGCGATT.............................2611.0010010
......................................................................................................................................................................................................................................................................................................TGGTCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTGCGCAGCGTCTATGTC...............................................................................................2711.0010100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACG-CCACGCGAT..............................2511.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACG-CCACGCGATTT............................2711.0011000
dm3
CATAATTCTTATTAT---------------------------------------------------------------------------TTTCTCCAATATCTATTGATATGTCAG-----------------------------------------------------------------------------------AACTCTTTATTTTATTATTATTTTAAAA--ATGTTTTGATTTTTCTTCGTTTTATTGTTTGTCTTGCCAATTTCTATCGGTGT------------------------------------------------------------------------------------TTGCATTTCCACTAGCTGA---------------TAGTCGGGGAACTCGACTAAAGCATTCTCTCTTGAGTTCTTATCATG----AACAAACATATCATTAA---GGTACTAAAGTATAATTGCACTGGTTCTTTATGT------------------ATTACCAAAGACACTAGAATAACAAGATGCGTAACGGCCATACATTGGTTTGGC----------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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......................................................................................................................................................................................................................................ATGTTTTGATTTTTCTTCGTT.............................................................................................................................................................................................................................................................................................................................................................21100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTTCTTCGTTTTATTGTTTGT..................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000110000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................TCGTTTTATTGTTTGTCTTGC.............................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000010000
..............................................................................................................................................................................................................................................................TTGTTTGTCTTGCCAATTTCT.....................................................................................................................................................................................................................................................................................................................................21150.2030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGGGGAACTCGACTAAAGC................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTTGATTTTTCTTCGTTTTATTGTTTGTC.................................................................................................................................................................................................................................................................................................................................................2950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGATGCGTAACGGCCATACATC..............................27200.2040000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTCTTCGTTTTATTGTTTGTCTTGC.............................................................................................................................................................................................................................................................................................................................................25170.1830000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTTGATTTTTCTTCGTTTTATTGTTTGT..................................................................................................................................................................................................................................................................................................................................................2860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TTCTTCGTTTTATTGTTTGTCTTGCCA...........................................................................................................................................................................................................................................................................................................................................27130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACACTAGAATAACAAGATGC..............................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGCGTAACGGCCATACATTGGTT..........................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010010000
........................................................................................................................................................................................................................................................GTTTTATTGTTTGTCTTGCCA...........................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAATAACAAGATGCGTA...........................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATGCGTAACGGCCAT...................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000001000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................A---------------TAGTCGGGGAACTCGACTA....................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACGGCCATACA................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTAACGGCCATACAT...............................19200.1530000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGCGTAACGGCCAT...................................25200.1530000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAAGATGCGTAACGGCCATACA................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTTATTGTTTGTCTTGCCAAT.........................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAATAACAAGATGCGTAA..........................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACACTAGAATAACAAGAT................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATAACAAGATGCGTAACG........................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TCTTCGTTTTATTGTTTGTC.................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGCGTAACGGCCATACATTGGTT..........................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGCGTAACGGCCATACATTG.............................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.............................................................................................................................................................................................................................................GATTTTTCTTCGTTTTATTGT......................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CTTCGTTTTATTGTTTGTCTT...............................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTCGTTTTATTGTTTGTC.................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAAGATGCGTAACGGCCATA..................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGGGGAACTCGACTAA...................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGATTTTTCTTCGTTTTATTGTTTGTCT................................................................................................................................................................................................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGATTTTTCTTCGTTTTATT........................................................................................................................................................................................................................................................................................................................................................20140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTGATTTTTCTTCGTTTTATTGTTTGT..................................................................................................................................................................................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................TGTTTTGATTTTTCTTCGTTTTATTGTT.....................................................................................................................................................................................................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTTGATTTTTCTTCGTTTTATTGTT.....................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTTGATTTTTCTTCGTTTTATTGT......................................................................................................................................................................................................................................................................................................................................................2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TTTGTCTTGCCAATTTCTATC..................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AA--ATGTTTTGATTTTTCTTCGTT.............................................................................................................................................................................................................................................................................................................................................................2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGACTAAAGCATTCTCT.........................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTTGATTTTTCTTCGTTTT...........................................................................................................................................................................................................................................................................................................................................................19160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TTTCTTCGTTTTATTGTTTGTCTTGC.............................................................................................................................................................................................................................................................................................................................................26170.1220000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTTTTATTGTTTGTCTTGCCAATTTC......................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTATTGTTTGTCTTGCCAATTTCTA....................................................................................................................................................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAATAACAAGATGCGTAACGGC......................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGTAACGGCCATACATTGGTT..........................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGATGCGTAACGGCCATACATTGG............................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAAGATGCGTAACGGCCATAC.................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................TATTGTTTGTCTTGCCAATTT.......................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAGACACTAGAATAACA....................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGA---------------TAGTCGGGGAACTCGACT.....................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATAACAAGATGCGTAACGGCCATA..................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACGGCCATACATTG.............................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAAGATGCGTAACGGCCATACAT...............................27200.1020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAACAAGATGCGTAACGGCCATACA................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATAACAAGATGCGTAACG........................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATAACAAGATGCGTAACGGCCA....................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................TTTTGATTTTTCTTCGTTTTATT........................................................................................................................................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TATATCTCTAAATGTTTCTGGCGCGATTCTCTAAAAATCTGCATTTAAATTTAGAAATCTTTTTTTTTTAAATTTTGTT--------------CCCCAATTTTTACTGATATTTCAG-----------------------------------------------------------------------------------AAAATG---------------------------------------------------------------------------------------------------------------------------------------------------TTGAAATTTCTCGTTTGCACTTCTACTAGCTGAGTAACGGGTGTCTGATAGTCGGGGAACTTGACTATA--------------------------------------------------------------------------------------------------GCATTGTATCAAAGACACTAGAATAATAAGATGCGTAACGGCCATACATTGGTTTTGC----------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................TGAGTAACGGGTGTCTGATAGTCGG................................................................................................................................................................................................2530.3310000001
.................................................................................................................................................................................................................................................................................................................................................................................GCACTTCTACTAGCTGAGTAACGGGT.............................................................................................................................................................................................................26120.0810000100
.............................................................................................................................................................................................................................................................................................................................................................................................................CTGATAGTCGGGGAACTTGA.......................................................................................................................................................................................20200.0510001000
..TATCTCTAAATGTTTCTGGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATAATAAGATGCGTAACGGCCATA..................................28200.0511000000
droYak3
CATAGTTTTATTAGTCTT-----------------------------------------------------------------GTAAATTTCT-----------ATCGATTTGTCAAA-----AAACTTTTTGCCACGCCCACTCTAACGCCCACAAACCGCCCAAAGCTGCTACTCCCAAACTTTTGAA------------------------------------AA--GTGTTTTGATATGTTTTCATTTTTGTATTAGTCTTGTAAAATTCTATCGATTTGCCAAAAAACTTTCTGCCACG--------------CCCAATATTACGCCTACAAACCGCCGAAAACTGTGTTTAAGACTCTCCTTCTCCCTTCCACTAGCTGAGTAACG----------------------------------------------------------------------------------------------------------------------------------------GCAAAGACATTATAATAACAAGATGCGTAACGGCCATACATTGGTTTTGC----------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................CACGCCCACTCTAACGCCCACAAACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.40808000000000
..................................................................................................................................TTGCCACGCCCACTCTAACGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.35700070000000
................................................................................................................................................................................................................................................................................TCTATCGATTTGCCAAAAAACTTTC...............................................................................................................................................................................................................................................................................................................25200.15303000000000
..........................................................................................................................................................................................................................................................TTTTGTATTAGTCTTGTAA...........................................................................................................................................................................................................................................................................................................................................19200.15303000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTAAGACTCTCCTTCTCCC...................................................................................................................................................................................................................................20200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................TGTTTAAGACTCTCCTTCTCC....................................................................................................................................................................................................................................21200.05100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATAACAAGATGCGTAACGGCC.....................................24200.05100000010000
...............................................................................................................................................................................................................................................TATGTTTTCATTTTTGTATTAGTCTTG..............................................................................................................................................................................................................................................................................................................................................27200.05101000000000
...........................................................................................................................................................................................................................................................TTTGTATTAGTCTTGTAAAATTC......................................................................................................................................................................................................................................................................................................................................23200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATAACAAGATGCGTAACGGCC.....................................25200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATAACAAGATGCGTAACGGCCA....................................26200.05100000010000
..........................................................................................................................................................................................................................................................TTTTGTATTAGTCTTGTAAAA.........................................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATGCGTAACGGCCATACA................................24200.05101000000000
..........................................................................................................................................................................................................................................................................................TGCCAAAAAACTTTCTGCCACG--------------C.........................................................................................................................................................................................................................................................................................23200.05100100000000
....................................................................................................................................................................................................................................................................................TCGATTTGCCAAAAAACTTTCTGCCACG--------------..........................................................................................................................................................................................................................................................................................28200.05100100000000
droEug1
ACCTTGT----------------------------------------------------------------------------------------------------------------------ATATTTT--------------------------------------------------GTATTGTA---------------------------------------TT--T------------------TTGTATTTTTTTTTTCAATATCTATCGATTTACCAAAGATATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGCTAAA-----------------------------------------------AAATTTCTTTTTGCTAAAACGTATGCCTCATTAATACCT-----------ATAGATTCACCCAA-----AAAAAAATTGCCACGCCCA-------------AAACCGCCCAAA---------------------------------------------------------------A--CTGTCGTTTTTTTTCTTGC---TATTTGTCTCATTAAAACCTTTCGATTGACCTAAAAAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droTak1
TTTGTC-----------------------------------------------------------------------------------------------------AGTTTGTCCAAAACATGTTTTTTAT--------------------------------------------------GTTTTGAA---------------------------------------AA--T------------------TTGATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTCA-TCACATCGA------TATAAAAAA------------------CTTTTGT------------------TCTACCAAAGACATTAGAATATGAAGATGGATAACG-CCATACGATTTTTTTGCACACAATTATTTGGTGCTGGCTSizeHit CountTotal NormTotal
No Reads
droEle1
CTTGAG--------------------------------------------------------------------------------AGTTTGT-----------ATTTTTTTGCCA-------------------ATAC----------------------------------------------------------------------------TAATATTTTTGAT--ACATTTTAATTTTAGCTTA---------TTGCCTGCCGAATTTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AATATTTTTAAAATTATT-----------------------------------------------------------------AA--------ATTAAATATATATTTATTT-------------------------------------------------------------------------TTAAAAATTTTTTGGAAAATG--------------------------------------------------------------------------------TAAGATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---------------AGC--TATTCSizeHit CountTotal NormTotal
No Reads
droKik1
TACATTTTGAAAATT---------------------------------------------------------------------------TTTGACTA-----------AATT------------------------------------------------------------------------TTTAAAATTTGTCTGAATTTTTAACATTTTTTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTT---------------ATTTTTATTTSizeHit CountTotal NormTotal
No Reads
droAna3
TCGATTTTTTGAGAACTT-----------------------------------------------------------------GAGGATTTTT-----------AAGAAACCTTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAA-----------------------------------------------ATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATTAAATTTGTAACACTT-----------------------------------------------------------------GTCAAATTAT-----------AGAAATAAAA---------CTAAACTTCACAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droWil2
CAAAA------------------------------------------------------------------------------------------------------------------------AAAATTTGAAAAGT----------------------------------------------------------------------------CAAAAAAAAAAAAAAA--TTTTTTTTTTT------------------TTTTTCTTTTTCTTTCTGGATACCAAAAGCTTGTGATATATTTA-----------------------------------------------TT------------------------------------------------------------------------------------------------------------------AAA-------------TACTGAACAAATT----------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AATATTCTGTAG------------------------------------------------------------------------AAAATTTCATGCTG------ATCGGTTAAGAAA------CACGTGTTTGCGGCAC----------------------------------------------------------------------------CAGCGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTG----------------------------AAGCAT------------------------------------------------TA---------------------TAATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................TTAAGAAA------CACGTGTTTGCGGCAC----------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................TAAGAAA------CACGTGTTTGCGGCAC----------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001000000000000000000000000000000000000000000000000000000000
droMoj3
AATTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGATATACCAAACACATACCACATGTGTATCGTTTTGAAAT----------------------------------------------------------------------------------------------------------------------------------GAAA-------ATACCGAT--AAG-------------CAT---------TCAACATCCCTAAAATTAA-GCTGCTTGG---------------------------------------------------------------------TAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/19/2015 at 05:44 AM