ID:

dsi_13061

 Coordinate:

2r:5416299-5416448 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-11.2 -10.2 -10.2

Flybase annnotation

CDS [2r_5416200_5416757_+]; exon [2r_5416168_5416806_+]

No Repeatable elements found

mature
  1. 2r:5412538-5412557 +
  2. dsi_13061  2r:5416390-5416409 +
  3. node_100403:321-340 -
star
  1. 2r:5412566-5412589 +
  2. dsi_13061  2r:5416418-5416441 +
  3. 2r:5420017-5420040 +
  4. node_100403:289-312 -

Sense Strand Reads

##########################################################################################################################################################################################################################################################
ACATGGCCCAGGGCGTCTACGTCGTCTCCAAGGCGGAGTGGGGTGGTCGCGGCGCCAAATGGACCGTTGCCCTGGGCAACTACCTCAGCTACGCCATCATCCACCACACCGCCGGCTCCTACTGCGAAACCCGTGCCCAGTGCAACGCCGTGCTGCAGAGCGTCCAGAACTACCACATGGACTCCCTGGGCTGGCCCGACATCGGCTACAACTTCCTGATCGGCGGAGACGGCAACGTGTACGAGGGACG
*********************************************************************************************************************************************..........(((.(((...(((((...........)))))...))))))..********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 GSM343915
embryo
 O001
Testis
 M023
head
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGA....................... 22 0 4 5.00 20 0 9 9 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGC.......................... 19 0 4 3.75 15 2 5 8 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAACGCCGTGCTGCAGAGC......................................................................................... 20 0 3 3.33 10 4 2 3 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCAACGCCGTGCTGCAGAGC......................................................................................... 22 0 3 2.33 7 5 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTACCACATGGACTCCCTGGGCTG......................................................... 24 0 4 1.50 6 1 2 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGC.......................... 18 0 4 1.50 6 0 4 2 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGCGGA..................................................................................................................................................................................................................... 23 0 3 1.33 4 4 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................TGCGAAACCCGTGCCCAGTGCAA......................................................................................................... 23 0 3 1.33 4 0 0 0 0 4 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATG....................................................................... 18 0 3 1.33 4 2 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCCCAGTGCAACGCCGTGCTGCAGAGC......................................................................................... 27 0 3 1.33 4 3 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGG........................ 20 0 4 1.25 5 1 1 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGGAGACGG.................. 26 0 4 1.25 5 3 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATGGACTCCCTGGGCTGGCCCG.................................................... 22 0 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGGA....................... 21 0 4 1.00 4 2 2 0 0 0 0 0 0 0 0 0 0
..................................................................................................................GCTCCTACTGCGAAACCCGTGCCC................................................................................................................ 24 0 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATCGGC.......................... 21 0 4 1.00 4 2 0 0 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATCGGCGGAGAC.................... 27 0 4 1.00 4 2 2 0 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGC........................................................................................................................................................................................................................ 20 0 3 1.00 3 1 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACATGGACTCCCTGGGCT.......................................................... 18 0 4 1.00 4 0 4 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................GTGCCCAGTGCAACGCCGTGCTGCAGAGC......................................................................................... 29 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGAC.................... 25 0 4 1.00 4 1 1 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGG........................ 21 0 4 1.00 4 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CAACGCCGTGCTGCAGAGC......................................................................................... 19 0 3 1.00 3 0 3 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTTCCTGATCGGCGGAGACGGC................. 22 0 4 0.75 3 0 2 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGGAGACGGC................. 27 0 4 0.75 3 0 2 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................ACAACTTCCTGATCGGCGGAGACGGC................. 26 0 4 0.75 3 0 2 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATCGGCGGA....................... 24 0 4 0.75 3 2 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACTTCCTGATCGGCGGAGACGGC................. 25 0 4 0.75 3 0 1 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACAACTTCCTGATCGGCGGA....................... 20 0 4 0.75 3 1 2 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCACATGGACTCCCTGGGCTGGCCC..................................................... 25 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CCAGAACTACCACATGGACTCCCTGGG............................................................ 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAACGCCGTGCTGCAGAGC......................................................................................... 21 0 3 0.67 2 1 0 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATGGACTCCCTGGGCTGGCCC..................................................... 21 0 3 0.67 2 0 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCAACGCCGTGCTGCAGAGCGT....................................................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATGG...................................................................... 19 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0
...........GGCGTCTACGTCGTCTCCAAGGCGGA..................................................................................................................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
..................................GGAGTGGGGTGGTCGCGGCGCCAAATG............................................................................................................................................................................................. 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0
.......................................................CAAATGGACCGTTGCCCTGGGC............................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................AATGGACCGTTGCCCTGG............................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACTTCCTGATCGGCGGA....................... 19 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAG...................... 23 0 4 0.50 2 0 2 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CATGGACTCCCTGGGCTG......................................................... 18 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTGATCGGCGGAGACGGC................. 21 0 4 0.50 2 0 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TACCACATGGACTCCCTGGGCTG......................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACATGGACTCCCTGGGCTG......................................................... 20 0 4 0.50 2 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................ATGGACCGTTGCCCTGGGCA............................................................................................................................................................................ 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................AAATGGACCGTTGCCCTGGGC............................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTGATCGGCGGAGACGG.................. 19 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................ATGGACCGTTGCCCTGGGCAACTACC...................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................CCCTGGGCAACTACCTCAGCTACGC............................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GATCGGCGGAGACGGCAACGT............ 21 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................TGCCCTGGGCAACTACCTCAGCTACG............................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................TACCACATGGACTCCCTGGGCT.......................................................... 22 0 4 0.50 2 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTGATCGGCGGAGACGGC................. 20 0 4 0.50 2 0 0 2 0 0 0 0 0 0 0 0 0
.........................................................AATGGACCGTTGCCCTGGGCAACT......................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGACGGC................. 28 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................CAAATGGACCGTTGCCCTGGGCAA........................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................AATGGACCGTTGCCCTGGGC............................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATCGGCGGG....................... 24 1 4 0.50 2 0 1 0 1 0 0 0 0 0 0 0 0
.......................................................CAAATGGACCGTTGCCCTGGGCA............................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGACG................... 26 0 4 0.50 2 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTCCTGATCGGCGGA....................... 18 0 5 0.40 2 0 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTCCTGATCGGCGGAGA..................... 20 0 5 0.40 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCACATGGACTCCCTGGGCTGGCC...................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATGGA..................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GACATCGGATACAACTTCCTGATCGGC.......................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACATGGACTCCCTGGGCTGGCC...................................................... 22 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
................................................................................................TCATCCACCACACCGCCGGC...................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.CATGGTCCAGGGCGTCTACGTC................................................................................................................................................................................................................................... 22 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGTGCAACGCCGTGCTGCAGAGC......................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ACTCCCTGGGCTGGCCCGAC.................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................CGACATCGGCTACAACTTCCTG................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAACGCCGTGCTGCAGAGCGTCCAG................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GGACTCCCTGGGCTGGCCC..................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACTACCACATGGACTCCCT............................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................CCAAGGCGGAGTGGGGTG............................................................................................................................................................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAACGCCGTGCTGCAGAGCGTCC..................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GACTCCCTGGGCTGGCCCGACATC............................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTCCAAGGCGGAGTGGGGTGGTCG......................................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................ACCGCCGGCTCCTACTGCGA........................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................CAACGCCGTGCTGCAGAGCGG....................................................................................... 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACGCCGTGCTGCAGAGC......................................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
....................GTCGTCTCCAAGGCGGAGTGGG................................................................................................................................................................................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................ACTACCTCAGCTACGCCATCATCCAC.................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................ATGGACTCCCTGGGCTGGC....................................................... 19 0 3 0.33 1 0 0 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................GCAACGTGTACGAGGGAC. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..ATGGCCCAGGGCGTCTACGTC................................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCCAGTGCAACGCCGTGCTGCAGAGC......................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CATCGGCTACAACTTCCTGAT.............................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................ACACCTCCGGCTCCTACTGCGAAA......................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAACGCCGTGCTGCAGAGCGTC...................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................CGTCGTCTCCAAGGCGGAG.................................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........AGGGCGTCTACGTCGTCTCCAAGGC........................................................................................................................................................................................................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GAACTACCACATGGACTCCCTG.............................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CATGGACTCCCTGGGCTGGCCCGA................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GGGCTGGCCCGACATCGGCTACAAC...................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTCCAAGGCGGAGTGGGGTGGT........................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................GTCTCCAAGGCGGAGTGGGGTGGTC.......................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................GTGGGGTGGTCGCGGCGCCA................................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATGGACTCCCT............................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACGCCGTGCTGCAGAGCGTCCA.................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..ATGGTCCAGGGCGTCTACGTC................................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTCCCTGGGCTGGCCCGACATCGGCTA.......................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AGTGCAACGCCGTGCTGCAGAGCG........................................................................................ 24 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGCGTCCAGAACTACCACATGGA..................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CCAGAACTACCACATGGACTCCCTGGGCT.......................................................... 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CGTCCAGAACTACCACATGGA..................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................CCATCATCCACCACACCGCC......................................................................................................................................... 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAACGCCGTGCTGCAGAGCGT....................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGAGACGGCAACGTGTACGAGGGACG 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
................CTACGTCGTCTCCAAGGC........................................................................................................................................................................................................................ 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATGGACTCCCTGGG............................................................ 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AACTACCACATGGACTCCCTGGGCT.......................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................CAGCTACGCCCTCACCCACCACACCGCC......................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AGAGCAACGCCGTGCTGCAGAGCGT....................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGCGGAGTGGG................................................................................................................................................................................................................ 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTCCAAGGCGGAGTGGGGTGGTCGC........................................................................................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACCACATGGACTCCCTGGGCTGGCCC..................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAACGCCGTGCTGCAGAGCGCCCA.................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAGAACTACCACATGGACTCCCTGGGC........................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................CCACCACACCGCCGGCTC.................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAGAACTACCACATGGACTC.................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACGCCGTGCTGCAGAGCGTCCAG................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................GGCGCCAAATGGACCGTTG..................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AGTGCTACGCCGTGCTGCAGAGCGT....................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................GTCCAGAACTACCACATGGACTCCCC............................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAGAACTACCACATGGACTCCCTGGGCC.......................................................... 28 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGCGG...................................................................................................................................................................................................................... 22 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................GCAACGCCGTGCTGCAGAGCGTCCAGAA................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................GGCTGGCCCGACATCGGC............................................ 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.................TACGTCGTCTCCAAGGCGGA..................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................TCGTCTCCAAGGCGGAGTGGTGTGGT........................................................................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTCCAAGGCGGAGTGGGGT.............................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................GGCGGAGTGGGGTGGTCGCGGCGCC.................................................................................................................................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................TGCAACGCCGTGCCGCAGAGCGTC...................................................................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CCAGAACTACCACATGGACTCCCT............................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGCTG...................................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.CATGGCCCAGGGCGTCTACGTC................................................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CCCCGGGCAACGCCGTGCTGCAGAGC......................................................................................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................TGGGCAACTACCTCAGCTACGCCATCA....................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCAACGCCGTGCTGCAGAGCGTC...................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................CTCCAAGGCGGAGTGGGGCGGTCGCGG...................................................................................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................CGCGGCGCCAAATGGACCGTT...................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAGAACTACCACATGGAC.................................................................... 18 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................AACGCCGTGCTGCAGAGCG........................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................GTGCAACGCCGTGCTGCAG............................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................CATCATCCACCACACCGCC......................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ACTCCCTGGGCTGGCCCGACATC............................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACATGGACTCCCTGGGCTGGCCC..................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
..............GTCTACGTCGTCTCCAAGGCGGAGTGG................................................................................................................................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AGTGCAACGCCGTGCTGCAGAGCGTC...................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................CAGAACTACCACATGGACTCCCTGGGCT.......................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CCCTGGGCTGGCCCGACATCGGCT........................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................AGTGCAACGCTGTGCTGCAGAGCGT....................................................................................... 25 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CAGTGCAACGCCGTGCTGCAGAGC......................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................CCACATGGACTCCCTGGGCC.......................................................... 20 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCTGATCGGCGGAGACGG.................. 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTGATCGGCGGAGACGGCAT............... 22 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGACGG.................. 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCG......................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGG....................... 22 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CCTGATCGGCGGAGACGGCAACGTGTAC........ 28 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATCGGCTACAACTTCCTGATCGGCG......................... 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATCGGCTACAACTTCCTGATC............................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTACCACATGGACTCCCTG.............................................................. 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATAGGCGGAGAC.................... 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGA..................... 24 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTTCCTGATCGGCGGAGACGG.................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTCCTGATCGGCGGAGAC.................... 21 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTCCTGATCGGCGGAGACG................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ACCACATGGACTCCCTGG............................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACATGGACTCCCTGGGCT.......................................................... 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGGG....................... 21 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACTTCCTGATCGGCGGAG...................... 20 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................CACATGGACTCCCTGGGCG.......................................................... 19 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GGACTCCCTGGGCTGGAC...................................................... 18 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACAACTTCCTGATCGGCGGAGA..................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GCTACAACTTCCTGATCGGCGGA....................... 23 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CACATGGACTCCCTGGGCTGG........................................................ 21 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTACAACTTCCTGATCGGCGGAGG..................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................AACTTCCTGATCGGCGGAGACGG.................. 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTCCTGATCGGCGGAGACGG.................. 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACAACTTCCTGATCGGCGGAGACGGCAAC.............. 29 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTCCTGATCGGCGGAGAC.................... 20 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................ACAACTTCCTGATCGGCGGG....................... 20 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................ACTTCCTGATCGGCGGAGACGGC................. 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GACGGCAACGTGTACGAGGAC.. 21 2 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCGGAGA..................... 23 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCTACAACTTCCTGATCGGCG......................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTTCCTGATCGGCGGAGAC.................... 19 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTACCACATGGACTCCCT............................................................... 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTGATCGGCGGAGACGGCAACGT............ 25 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TACAACTTCCTGATCGGCG......................... 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACTTCCTGATCGGCGGAGAC.................... 22 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGGAGACGGCAACGTGTACGA...... 21 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACATGGACTCCCTGGGCTG......................................................... 19 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................ACATGGACTCCCTGGGCC.......................................................... 18 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TCGGCTACAACTTCCTGATCGGCT......................... 24 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CCTGATCGGCGGAGACGGC................. 19 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................CAACTTCCTGATCGGCGG........................ 18 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCTGATCGGCGGAGACGAC................. 20 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................CCTGATCGGCGGAGACGG.................. 18 0 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATCGGCTAAAACTTCCTGATCGGCT......................... 25 2 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................GTTCGCGTCGCCTAATGGA........................................................................................................................................................................................... 19 3 11 0.18 2 0 0 0 0 0 0 0 0 1 1 0 0
.......................................GGGGCGGTCGGGGCGCC.................................................................................................................................................................................................. 17 2 10 0.10 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................ACATGGACTCCCGGTGCT.......................................................... 18 2 10 0.10 1 0 0 0 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................ACACGGACTCCCGGGGC........................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 0 0 1 0 0
..................................................................................................................................................GTCGTGCCTCAGAGCGTCC..................................................................................... 19 3 13 0.08 1 0 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................TGCGAAACCCGTCTCCA............................................................................................................... 17 2 15 0.07 1 0 0 0 0 0 0 0 0 0 0 0 1
........TCGGGCGGCTACGTCGTC................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0
..................................GCAGTGGGGTGCTCGCGGA..................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TGTACCGGGTCCCGCAGATGCAGCAGAGGTTCCGCCTCACCCCACCAGCGCCGCGGTTTACCTGGCAACGGGACCCGTTGATGGAGTCGATGCGGTAGTAGGTGGTGTGGCGGCCGAGGATGACGCTTTGGGCACGGGTCACGTTGCGGCACGACGTCTCGCAGGTCTTGATGGTGTACCTGAGGGACCCGACCGGGCTGTAGCCGATGTTGAAGGACTAGCCGCCTCTGCCGTTGCACATGCTCCCTGC
*********************************************************..........(((.(((...(((((...........)))))...))))))..********************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 O001
Testis
.................................................................................TGGAGTCAATGCGGAAG........................................................................................................................................................ 17 2 14 0.71 10 10 0 0 0 0 0 0 0 0
........GTCCGGGATATGCAGCAGA............................................................................................................................................................................................................................... 19 3 7 0.43 3 0 1 0 1 0 0 1 0 0
..................................................................................GGAGTCGATGCGGTAGTAGGT................................................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
................................................................................ATGGAGTCAATGCGGAAG........................................................................................................................................................ 18 2 6 0.33 2 2 0 0 0 0 0 0 0 0
..........................................................................................TATGGTAGTAGGTGGTGTGGC........................................................................................................................................... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0
...................................................GGCGGTTCACGTGGCAACG.................................................................................................................................................................................... 19 3 20 0.30 6 0 0 0 0 0 2 3 0 1
.............GCAGATTCAGCAGACGTT........................................................................................................................................................................................................................... 18 2 7 0.29 2 0 0 0 0 1 1 0 0 0
.........TCCGGCATATGCAGCAGAGA............................................................................................................................................................................................................................. 20 3 4 0.25 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................CCTCGCAGGTCTTCAAGGTGT......................................................................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................GACGTCTCGTAGGTCTTG................................................................................ 18 1 5 0.20 1 0 0 1 0 0 0 0 0 0
....................................................GCGGTTCACGTGGCAACG.................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................AGGGACCCACCCGGGCT................................................... 17 2 8 0.13 1 0 0 0 0 0 0 0 1 0
.......GGTCCGGGATATGCAGCA................................................................................................................................................................................................................................. 18 3 20 0.10 2 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGGACTAGCAGCCT....................... 15 1 12 0.08 1 0 0 0 0 0 1 0 0 0
...............................................................................CATGGAGTCAATGCGGAAG........................................................................................................................................................ 19 3 15 0.07 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GCCTCTGCCGTCGCA............ 15 1 18 0.06 1 0 0 0 0 0 0 0 1 0
................................................................................................AGTAGCTGGTGTGGC........................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................AGGGACCCACCCGGGCTT.................................................. 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0
........GTCCGGGATATGCAGCAG................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0
........................................TCCACCAGCGCTGCGGTC................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0
............CGGATATGCAGCAGA............................................................................................................................................................................................................................... 15 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Generated: 04/23/2015 at 01:55 PM