ID:dsi_13050 |
Coordinate:3r:17241887-17241953 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
Antisense to CDS [3r_17241965_17242044_+]; exon [3r_17241954_17242153_-]; CDS [3r_17241954_17242055_-]; exon [3r_17241700_17241886_-]; CDS [3r_17241700_17241886_-]; intron [3r_17241887_17241953_-]; Antisense to five_prime_UTR [3r_17241639_17241964_+]; Antisense to exon [3r_17241639_17242044_+]
No Repeatable elements found
| ##################################################-------------------------------------------------------------------################################################## CATATTTGAAACAATGCCATGAGCCACCTTGGACATCATATTTCGTGAAGGTAGGACTGCCCTATTTCCACCCGAGTATTTTCACCAGATCTAATGAGGAATATGCTCCAAGTCTAGTTCCACGATGTGGCCAACGATCAGAGGGGAATGTCTCACTTTAATTGGAC **************************************************......(((..((..........((((((.(((..((.......))..))).))))))..))..)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M023 head |
O002 Head |
SRR902009 testis |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M024 male body |
O001 Testis |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................ATTTCGTGAAGGTAGGACTGCC.......................................................................................................... | 22 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................TCAGGGGGGAATGTGTGACTT......... | 21 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .......................................................................................................................CCACGATGTGGCCAACGATCA........................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................GTTGCCAACGATCATGGGGGAAT.................. | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ......................................................................................................................TCCACGATGTGGCCAACGATCAGAGGGGAA................... | 30 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................CAACGATCAGAGGGGAATGTCTCACTT......... | 27 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..........................................................................................................................................CAGGGGGGAATGTGTGACTT......... | 20 | 3 | 6 | 1.00 | 6 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................CAACGATCAGAGGGGATTT................. | 19 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...............................GACATCATATTTCGTGAAGGT................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..........ACAATGCCATGAGCCACC........................................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| ...................................................................................................................................CAACGATCAGAGGGGAATAA................ | 20 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ................................................................................................................................GTCCAACGATCAGAGG....................... | 16 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................................................ACGACCAGAGGGGAAT.................. | 16 | 1 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ..............................................................................................................................GTTGCCAACGATCAGA......................... | 16 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ................................................................................................................................GTCCGACGATCAGAGG....................... | 16 | 2 | 20 | 0.15 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 |
| ...................................................................CCACCCGAGTCTTTTGA................................................................................... | 17 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................AGGGGAATGTGTGACTT......... | 17 | 2 | 13 | 0.08 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................GCCAACGACCAGAGGTG..................... | 17 | 2 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................AACGATCAGACGGGCA................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ####################################################################################################################################################################### GTATAAACTTTGTTACGGTACTCGGTGGAACCTGTAGTATAAAGCACTTCCATCCTGACGGGATAAAGGTGGGCTCATAAAAGTGGTCTAGATTACTCCTTATACGAGGTTCAGATCAAGGTGCTACACCGGTTGCTAGTCTCCCCTTACAGAGTGAAATTAACCTG **************************************************......(((..((..........((((((.(((..((.......))..))).))))))..))..)))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
O001 Testis |
M025 embryo |
SRR553486 Makindu_3 day-old ovaries |
M024 male body |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................CCGGTTGCTAGTCTCCCCTTA.................. | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................ACCGGTTGCTAGTCTCCCCTT................... | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................GGTTGCTAGTCTCCCCTTACA................ | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................TTGCTAGTCTCCCCTTACAGA.............. | 21 | 0 | 1 | 2.00 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .........TTTTTACGGTACTCGGTGGAAC........................................................................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...............................................................................................CTCCTTATACGAGGTTCAGATCAAGGT............................................. | 27 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................AGGTTGCTAGTCTCCCCTTACA................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................GTTGCTAGTCTCCCCTTACA................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................CCTTATACGAGGTTCAGATCAAGGTGCT.......................................... | 28 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .....................TTTGTGGAACCTGTAGTATAAAG........................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................GCTACACCGGTTGCTAGTCTCC....................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................CCGGTTGCTAGTCTCCCCTTAC................. | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................GTCTCCCCTTACAGAGTGAAA........ | 21 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................TCACCGGTTGCTAGTCTCCCC..................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................ATTGCTAGTCTCCCCTTACAGA.............. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................TTTGCTAGTCTCCCCTTACAGA.............. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................GTCTAGATTACTCCTTATA............................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................CGGTTGCTAGTCTCCCCTTAC................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................TTTGCTAGTCTCCCCTTTCAGA.............. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................CTACACCGGTTGCTAGTCTCC....................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ...................................................................................................................................GTTGCTAGTCTCCCCTTA.................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................CGGTTGCTAGTCTCCCCTTACAGA.............. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................TCCTTATACGAGGTTCAGATCAAGGT............................................. | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .................................................................................................CCTTATACGAGGTTCAGA.................................................... | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .....................................................................................................ATACGAGGTTCAGATCAAGGTGCTACACC..................................... | 29 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............TTACGGTACTCGGTGGAACCT...................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..........TGTTACGGTACTCGGTGGAAC........................................................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................................CCGGTTGCTAGTCTTCCCTTA.................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ............................................................................................................GTTCGGATCAAGGTGTTACGC...................................... | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .........................................AAGCACTTCCAGCCT............................................................................................................... | 15 | 1 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ...........................................................................................................................................TCCCCCCTTACACACTGAAA........ | 20 | 3 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| .........................TGGAACCAGTGGTATGAAG........................................................................................................................... | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................................................AGGGGATAAAGGTGG............................................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/23/2015 at 03:26 PM