ID:

dsi_13047

 Coordinate:

2r:6694823-6695055 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.1 -28.1 -28.1

Flybase annnotation

exon [2r_6695056_6695162_-]; CDS [2r_6695056_6695162_-]; exon [2r_6694576_6694822_-]; CDS [2r_6694576_6694822_-]; intron [2r_6694823_6695055_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGCATTGACCATGTCATATCGTTAAATTCTTGTCAGTTGATTTGTATTTGTAATTGCTAACAAAACGGAAGCGTCGGACTTTATAGTACTTAATCGTCTTTGATTCATATAACTTTATCAAACAAAACCACTTTATATAGGAAATCAAAAATTGCATTTCTCAGCAGCAGAACAAATAAGATGGCGTATTCCGAAACATTTTTTATAATATTTAAACATTTGCCTTGCAGCACAATGAATGGTTCGGTACGGTTCTGCGAAAAGTGCAAGATCATCAAGC
**************************************************(((((((.((((...))))...............((((....((((((.(((((...((((......(((....)))..(((.(((.......)))..)))((((((............)))))).................(((((((((...))).)))))).)))))))))))))))....))))(((((..((((....))))..))))).........)).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 M025
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M053
female body
...............................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTACGGT........................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................................................CAATGAGTGGTTCGGTACGG............................ 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................CCGTACGGATCTGCGAACAGT............... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................GCACAATGAATGGTTCGGTACGGTT.......................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................TGTCAGTTGATTTGTATTTGT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................GCACAATGAATGGTTCGGTAC.............................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................TTCGGTACGGTTCTGCGAAAAGTGCAA........... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................ATGGTTCGGTACGGTTCTGC...................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTACGGTT.......................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TGTAATTGCTAGCAAAA....................................................................................................................................................................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.................................TTGCCAGTAACGAATCGCACA....................................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................GTACGGCTCTGCGAACAG................ 18 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................GTTCAAGTCTTGTCAG.................................................................................................................................................................................................................................................... 16 2 20 0.40 8 2 0 0 0 0 0 0 6 0 0
...........................................................................................................................................................................................................................................................................................................GTACGGTTCTTCGAAATGT............... 19 2 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TTTCTGAGCAGCAGAAC........................................................................................................... 17 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................ACAATTGATTTGTATCTGTAAT.................................................................................................................................................................................................................................. 22 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0
..........................................................................................................TTGCTAACAAAACGGA................................................................................................................................................................................................................... 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................AAAATGGCAGCGGCGGACTTT...................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................................................................................................TTCTGAGCAGCAGAACA.......................................................................................................... 17 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.........................................................................................................ATTGCTAGCAGAACGGA................................................................................................................................................................................................................... 17 2 16 0.06 1 0 0 0 1 0 0 0 0 0 0
...................ACTTTGCTCGCGATT........................................................................................................................................................................................................................................................................................................... 15 1 19 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................GTTCAGCGAAAAGTTCAAGT......... 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GTCTTTGCGTAAGAATTGTTGAAACGCGCGCTAAACGGTCATTGCTTAGCCATTCGTAACTGGTACAGTATAGCAATTTAAGAACAGTCAACTAAACATAAACATTAACGATTGTTTTGCCTTCGCAGCCTGAAATATCATGAATTAGCAGAAACTAAGTATATTGAAATAGTTTGTTTTGGTGAAATATATCCTTTAGTTTTTAACGTAAAGAGTCGTCGTCTTGTTTATTCTACCGCATAAGGCTTTGTAAAAAATATTATAAATTTGTAAACGGAACGTCGTGTTACTTACCAAGCCATGCCAAGACGCTTTTCACGTTCTAGTAGTTCG
**************************************************(((((((.((((...))))...............((((....((((((.(((((...((((......(((....)))..(((.(((.......)))..)))((((((............)))))).................(((((((((...))).)))))).)))))))))))))))....))))(((((..((((....))))..))))).........)).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
..............................CTATACGGTCAGTGCTTAG............................................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................CAGGTCATTGCTTAGCCAT........................................................................................................................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................GTCATTGCTTAGCCATTAGTACC................................................................................................................................................................................................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................GTCATTGCTTAGTCATTAGTACC................................................................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CCAAGCCATGCCAAGACGCTTT.................. 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................AGGTCATTGCTTAGCCAT........................................................................................................................................................................................................................................................................................ 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................CAGGTCATTGCTTAGCCATT....................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................CTTAGCAGCCTGACATCT................................................................................................................................................................................................... 18 3 20 0.60 12 0 0 9 0 0 0 0 3 0 0
............................................................................................................................................................................................................................................................................................TGTAACTTGCCAAGCCAT............................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................TAGCAGCCTGACATATCTTGA.............................................................................................................................................................................................. 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................CTTAGCAGCCTGACAT..................................................................................................................................................................................................... 16 2 11 0.45 5 0 0 4 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................................GCATATGGCCTTGTAAAAA............................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CCCAACCATTCCAAGACGC..................... 19 3 12 0.33 4 0 0 0 1 0 2 0 0 1 0
..........................................................................................................................................................................................................................................................................................................CCATTCCAAGACGCT.................... 15 1 3 0.33 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................ATCCTTTAGTTTTTA................................................................................................................................ 15 0 4 0.25 1 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................................TGTAACTTGCCAAGCCAG............................... 18 3 20 0.20 4 0 0 0 4 0 0 0 0 0 0
..................................................................................................................................................................................................................AAGAGTCGTCCCCTTGTT......................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 1 0 0 0 0
............................CACTATACGGTCAGTGCTTA............................................................................................................................................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.............................ACTATACGGTCAGTGCTTAG............................................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................TGCCCTAGCAGCCTGACAT..................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................TTTGGCCTAGCAGCCTGA........................................................................................................................................................................................................ 18 3 20 0.10 2 0 0 0 0 0 2 0 0 0 0
..........................................................................................................................TAGCAGCCTGACATATCTT................................................................................................................................................................................................ 19 3 14 0.07 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CCAAGCCAGTTCAAGACGC..................... 19 3 19 0.05 1 0 0 0 0 0 0 0 0 0 1
.....................................................................................................................TGCCCTAGCAGCCTGACA...................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..........................................................................ACTTTAAGATCAGTCAACAA............................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:6694773-6695105 - dsi_13047 CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGCATTG-ACCATGTCATATCGTTAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAAACGGAAGCGTCGGACTTTATAGTACTTAATCGTCTTTGATTCATATAACTTTATCAAACAA-AACCACTTTATATAGGAAA--------------TCAAAAATT------------------------GCATTTC--------------------------------------------------------------------------------------TCAGCAGCAGAA--------CAAATAAGA------TGGCGTATTC-------------------------------------------------------CGAAACA---TTTTTTAT-----------AATATT---TAAACATTTGCCTTGCAGCACAATGAATGGTTCGGTACGGTTCTGCGAAAAGTGCAAGATCATCAAGC
droSec2 scaffold_1:3533151-3533483 - CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTACCAGTAACGAATCGGTAAGCATTG-ACCATGTTATATCGTTAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAAACGGAAGCGTCGGACTTTATAGTACTTAATCGTCTTTGATTCCTATAACTTTATCAAACAA-AACCACTTTATATAGGAAA--------------TCAAAAATT------------------------GCATTTC--------------------------------------------------------------------------------------TCAGCCGCAGAA--------CAAATAAGA------TGGCGTATTC-------------------------------------------------------CAAAACA---TTTTTTAT-----------AATATT---TAAACATTTGCCTTGCAGCACAATGAATGGTTCGGTACGGTTCTGCGAAAAGTGCAAAATCATCAAGC
dm3 chr2R:5919282-5919573 - CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGCGTTATGTTATGTTAT--------A-TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACTTTATCAAACAA-AACCATTTTATCTAAGAAA--------------TTAAAAGTTGTCCCAATTAAGACATTTCCAAATGCATTTC--------------------------------------------------------------------------------------TCAGCAGCAGAA--------CAATTAGGA------CGGCGCATTC-------------------------------------------------------CGAAGCA---TTTTTGAT-----------AATATT---TAAACCTTTGCCTTGCAGCACAATGAATGGTTCGGTGCGGTTCTGCGAAAAGTGCAAGATCATCAAGC
droEre2 scaffold_4929:8450578-8450893 + CAGAAACGCATTCTCAACAACTTTGCGCGTGATTTGCCAGTAACGAATCGGTAAGTATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAATACAGAGGCTTCGAACTTTATAGTGCATTATCTTCTTTGATTCATATAACTTTATCAAACAA-AACCATTTTATCTAAGATT--------------TGACCCATTGTCCCAATTAAGACATTGGCAAATGC-TTTT--------------------------------------------------------------------------------------TCAGTAGCAAAA--------CAAATATGA------CAGCGAATTC-------------------------------------------------------CCAAACG---TTTTTGAT-----------AATGTT---TGAACATTTGTTCTACAGCACAATGAATGGTTCGGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAGC
droYak3 2L:18547589-18547919 - CAAAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGTATTA-ACCATGTTAACAAGT-CACTTTCGAAAATTTCTTTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCAGTAGACTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------ATTTTCATCT-TGATTCATATAATTTTATTAAAGAAAAACAATTTTATTTAAGAAA--------------TAAAAAATTGTCTTAAT---GACATTACCAAC------TA--------------------------------------------------------------------------------------TTAGTAGTAAAA--------CAAATAGAA------TAACGTATTT-------------------------------------------------------CCAAACA---TTTTTGAT-----------AATATT---TAAACATTTGCTCAACAGCACAATGAATGGTTCGGTGCGGTTCTGCGAGAAATGCAAGATCATAAAGC
droEug1 scf7180000409209:259593-259926 + CAAAAGCGCATACTGAATAACTTTGCGCGCGATTTACCAGTCACTAATCGGTAGGGATTC-ACGATGTTATCAAGTCAATTTTCGCCAATACAATTTCATTTCAAGTATTTAATGCGGAAGTGGAATTTAGATAATTCGCAATTGTTATAATCTTTTGAATGTTACACTTATAACCAAACACCCCAGAAAATATTTTTTGATCGCAATTATGTTTGTAACATACTTAGTTATAACTTTTCATTGTTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--CGTGAAACATCCGCGTTTCAGCACAATGAACGGCTCGGTGAGGTTCTGTGAAAAGTGCAAAATAATCAAGC
droBia1 scf7180000301506:778345-778812 + CAGAAGCGCATTCTCAACAACTTTGCACGAGACTTGCCTGTCACTAATCGGTGAGAATTT-ACCATGTCATCAAGTCCACATCCGCTAATTCCATTTGATTA--------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----ATATATTTGGTAATTGTTCGGCAAACATTTGATTGTACCTCTCTAACTAACTATATAGTTCATATTTATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAAATACGGAAGTGGCAAA---------------------------------------------------------------------------------------------------------------AAAGC-TTCTTCAATTTCGAAAGAAATCTATTTAAAACTGTTATCAAGCGAAGAGCTAGTATAATAATATTTTTTGTTAAGGCCTTCAACTCACTGCAATCAGTAAAC--------CAAAGAAGGAAATATCAGAGTGTACCAAAATTCTTCCTTAAAATACTCCGCCTGCAATTTTATTTATA------------CTAAATTCACTTATTGTA-----------AATATTTATGATTTA-TCTCTTTCCAGTACAATGAACGGATCGGTGCGCTTCTGCGAAAAGTGTAAGATCATCAAGC
droTak1 scf7180000415870:327695-327824 + CAGAAACGCATTCTCAACAACTTTGCACGAGACTTGCCAGTCACTAATCGGTGAGAATTT-ACCATGTCATCCAGTTCAATACCACTAAAACCTTTTGATTA--------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----AGAAATTTTGTAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCAAAC
droEle1 scf7180000491107:1177072-1177499 - CAGAAACGCATTCTCAACAACTTTGCCCGTGATTTGCCAGTTACAAATCGGTGAGGACCT-ATTGTGTTATCAAGCAAAGTTCCGCTAGAAATATTTTATTACAAGCTTAACATGTGAAATTGAAATTTA--TTGTTCGC------------------------------------------CTG-------------------------------------ATTC---------------CTTTTTATTAGTATTTTTTATTTATAACTATAAAACTGGCAG-------------------------------------------------------------------------------------------------CCAAAGT--TGT---AATAAA---------------------TTGTATGCTTATCTCTTGCTATTGTTAGCAAAGTAAAACAGCATTAAGCGGTTTGTAAATTGTTTAATTCCATTCGATTTGTAATACATTTAAGATAGTCTTATTACAGTGCCAGCACAAATATGTTTAAGTCACAGTCATAACTATAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATC--TGTGAAATATTTGTTTTTCAGCACAATGAACGGCTCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAAC
droRho1 scf7180000777200:101490-101948 + CAGAAACGCATACTTAACAACTTTGCGCGCGATCTGCCAGTCACAAATCGGTGAGGATTAAATTAAGTTATCAAGCTCAGTTCCGCGAAATCTATTTCATTAGAAGCCTAG--------------------------CGC------------------------------------------TTA-------------------------------------ATTTAGTTTTTATTTTTTGTTTTTTATTA-------TTATTTTTAACTATA-AACTGTCAG-------------------------------------------------------------------------------------------------CCGAAGTGCTGTGGTCTTAAATAAGCAAATTAAATAGTTTTTTTACATACTTGTCTTTTGATATTGCGAACAAAGTATAAAAGCTATAA-----------------------------------------------------------------------------------------------------------------AAG----------------------------------------------------AAGGG-AATCATTTGTTATAGGAAATAATGTTTCTTAAATGAAAAAATGACTCAGTTAA--------------------------------------------------------------------------------------------------------------AATGAAAA--------CAAAATGAA----------AA--------GTACCTTATACA--TTTTA--------------------TAATGGGCATTTCG-------------GAAAAAATGTATTTAATC--CGTAAAATATTTGATTTTCAGCACAATGAACGGATCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAGC
droFic1 scf7180000453948:624483-624573 - AGACAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT--TCGGATTTA-TTGGTTTCCAGCACAATGAACGGCTCTGTGCGGTTCTGTGAGAAGTGTAAGATAATCAAGC
droKik1 scf7180000302682:1537447-1537522 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAT-----------AATGTT---TA-------ACTTTCCAGCACCATGAACGGTTCCGTGCGGTTCTGTGAGAAATGCAAAATCGTCAAGC
droAna3 scaffold_13266:6111037-6111118 - AT--------------------------------TGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACATTTTTTGAA-----------TAT-----------------ATTTCAGAACAATGAACGGCTCTGTGCGATTCTGTGAGAAGTGCAAGATCATCAAAC
droBip1 scf7180000395839:268113-268168 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGCACCATGAACGGATCTGTGCGATTCTGTGAGAAGTGCAAGATCGTCAAGC
dp5 3:6129675-6129741 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTATTTTGTAGCACAATGAACGGCTCTGTCCGGTTTTGTGAAAAGTGTAAGATCATTAAGC
droPer2 scaffold_2:6344551-6344617 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTATTTTGTAGCACAATGAACGGCTCTGTCCGGTTTTGTGAAAAGTGTAAGATCATTAAGC
droWil2 scf2_1100000004513:5351228-5351304 + ACGATATTTATT------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTACTCTACAGAACAATGAATGGCTCTGTCCGATTTTGTGAGAAATGTAAAATCATCAAGC
droVir3 scaffold_12875:436438-436496 + CAGAAGCGCATTTTAAACAATTTTGCGCGCAATTTGCCGGTTACAAATCGGTGAGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:5053655-5053711 - C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGCACAATCAATGGCTCTGTTAGATTCTGTGAGAAGTGCAAGATCATCAAGC
droGri2 scaffold_15245:10534296-10534527 - CAAAAGCGGATTTTAAACAACTTTGCACGCAATTTGCCAGTCACAAATCGGTGAGTTTTT-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAGAGAGATAAGAG------------------------------------------------------------------------TTGTGCTCGGCTTGTCGAAGTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCACTTGATATGCTTCCCCTTTACAGAAGGTGGAATAATTGCGAACTAATGTTCTTACTAC-----------------------------------------------------------------------ATAT---T--A-----CATCCACAGCACAATGAATGGCTCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGCATTG-ACCATGTCATATCGTTAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAAACGGAAGCGTCGGACTTTATAGTACTTAATCGTCTTTGATTCATATAACTTTATCAAACAA-AACCACTTTATATAGGAAA--------------TCAAAAATT------------------------GCATTTC--------------------------------------------------------------------------------------TCAGCAGCAGAA--------CAAATAAGA------TGGCGTATTC-------------------------------------------------------CGAAACA---TTTTTTAT-----------AATATT---TAAACATTTGCCTTGCAGCACAATGAATGGTTCGGTACGGTTCTGCGAAAAGTGCAAGATCATCAAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTACGGT...........................1911.00100001000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAATGAATGGTTCGGTACGGTT..........................2511.00100000000000100000
.....................................................................................................................................................................................................................................................................................TGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAATGAATGGTTCGGTAC..............................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTACGGTTCTGCGAAAAGTGCAA...........2711.00100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCGGTACGGTTCTGC......................2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTACGGTT..........................2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAAACGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................1630.33100000000010000000
droSec2
CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTACCAGTAACGAATCGGTAAGCATTG-ACCATGTTATATCGTTAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAACAAAACGGAAGCGTCGGACTTTATAGTACTTAATCGTCTTTGATTCCTATAACTTTATCAAACAA-AACCACTTTATATAGGAAA--------------TCAAAAATT------------------------GCATTTC--------------------------------------------------------------------------------------TCAGCCGCAGAA--------CAAATAAGA------TGGCGTATTC-------------------------------------------------------CAAAACA---TTTTTTAT-----------AATATT---TAAACATTTGCCTTGCAGCACAATGAATGGTTCGGTACGGTTCTGCGAAAAGTGCAAAATCATCAAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTACGGTTCTGCGAAA..................1811.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAATGGTTCGGTAC..............................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGCGAAAAGTGCAAA..........1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTTCGGTACGGTTCTGC......................2111.0010100
dm3
CAGAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGCGTTATGTTATGTTAT--------A-TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGTAT------------------------------------------------------------------------TTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACTTTATCAAACAA-AACCATTTTATCTAAGAAA--------------TTAAAAGTTGTCCCAATTAAGACATTTCCAAATGCATTTC--------------------------------------------------------------------------------------TCAGCAGCAGAA--------CAATTAGGA------CGGCGCATTC-------------------------------------------------------CGAAGCA---TTTTTGAT-----------AATATT---TAAACCTTTGCCTTGCAGCACAATGAATGGTTCGGTGCGGTTCTGCGAAAAGTGCAAGATCATCAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGTTCTGCGAAAAGTGC.............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCGGTGCGGTTCTGCG.....................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGTGCGGTTCTGCGAAA..................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGGTGCGGTTCTGCGAA...................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTGCGG............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.................................TTGCCAGTAACGAATCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT---TAAACCTTTGCCTTGC....................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGCCAGTAACGAATCGGTAAGCGTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTTCGGTGCGGTTCTGC......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
.......GCATTCTTAACAACTTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTAACAACTTTGCGCGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGTTCGGTGCGGTTCTGCGAA...................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGCGGTTCTGCGAAAAGTGC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAATGAATGGTTCGGTG...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGAATGGTTCGGTGCG.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................TTTGCCAGTAACGAATCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTCGGTGCGGTTCTGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCGGTGCGGTTCTGCGAAAAG................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTCGGTGCGGTTCTGCGAAAAGT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............CTTAACAACTTTGCGCGCGATTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAATGGTTCGGTGCGGTTC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGTTCGGTGCGGTTCTGCGAAA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGAAAAGTGCAAGATCATCAAGC2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGGTTCGGTGCGGTTCTGCGA....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................GTAACGAATCGGTAAGCGTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................TTGCGCGCGATTTGCCAGTAACGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TTAACAACTTTGCGCGCGATTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AT--------A-TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGTTGATTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAATGGTTCGGTGCG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................CGCGCGATTTGCCAGTAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------CAATTAGGA------CGGCGCATTC-------------------------------------------------------..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGCGGTTCTGCGAAA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGCAGCACAATGAATGGT.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGCGGTTCTGCGAAAAGTGT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAATGGTTCGGTGCGG............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTTCTGCGAAAAGTGC.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCGGTGCGGTTCTGCGA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTTCTGCGAAAAGTGCAAGATCA......2711.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCGCGATTTGCCAGTAACGAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGCGGTTCTGCGAAAA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................TTGCGCGCGATTTGCCAGTAACGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TTGATTTGTAT------------------------------------------------------------------------TTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCGGTGCGGTTCTGCGAAAAGTGC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGA------CGGCGCATTC-------------------------------------------------------CGAAGCA---................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGTTCGGTGCGGTTCT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGCAAGATCATCAAGC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGAA--------CAATTAGGA------CG.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................AGTAACGAATCGGTAAGCGTTATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATT---TAAACCTTTGCCTTGCA...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGCGGTTCTGCGAAAAG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATCTAAGAAA--------------TTAAAAGTTGTCC...............................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................GCGCGATTTGCCAGTAACGAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGGTTCTGCGAAAAG................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGCGGTTCTGCGAAAAG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAA--------CAATTAGGA------CGGCG......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........CATTCTTAACAACTTTGCGCGCGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAATGGTTCGGTGCGG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
droEre2
CAGAAACGCATTCTCAACAACTTTGCGCGTGATTTGCCAGTAACGAATCGGTAAGTATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAAAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAATACAGAGGCTTCGAACTTTATAGTGCATTATCTTCTTTGATTCATATAACTTTATCAAACAA-AACCATTTTATCTAAGATT--------------TGACCCATTGTCCCAATTAAGACATTGGCAAATGC-TTTT--------------------------------------------------------------------------------------TCAGTAGCAAAA--------CAAATATGA------CAGCGAATTC-------------------------------------------------------CCAAACG---TTTTTGAT-----------AATGTT---TGAACATTTGTTCTACAGCACAATGAATGGTTCGGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............CTCAACAACTTTGCGCGTGATTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...................ACTTTGCGCGTGATTTGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATATGA------CAGCGAATTC-------------------------------------------------------CCAAAC....................................................................................................2511.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAATGGTTCGGTGCGGT...........................2011.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGTTCGGTGCGGTTCTGCGA....................2411.0010000100
.........ATTCTCAACAACTTTGCGCGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGAGAAGTGCAAGATCATCAAGC2711.0011000000
............CTCAACAACTTTGCGCGTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTTCTGCGAGAAGTGCAAGAT........2311.0011000000
droYak3
CAAAAACGCATTCTTAACAACTTTGCGCGCGATTTGCCAGTAACGAATCGGTAAGTATTA-ACCATGTTAACAAGT-CACTTTCGAAAATTTCTTTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCAGTAGACTTGTAT------------------------------------------------------------------------TTGTAATTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------------ATTTTCATCT-TGATTCATATAATTTTATTAAAGAAAAACAATTTTATTTAAGAAA--------------TAAAAAATTGTCTTAAT---GACATTACCAAC------TA--------------------------------------------------------------------------------------TTAGTAGTAAAA--------CAAATAGAA------TAACGTATTT-------------------------------------------------------CCAAACA---TTTTTGAT-----------AATATT---TAAACATTTGCTCAACAGCACAATGAATGGTTCGGTGCGGTTCTGCGAGAAATGCAAGATCATAAAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................AGTAACGAATCGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1541.50600000000006
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGTTCGGTGCGGTTCTGC......................2211.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAATGGTTCGGTGCGGTT..........................2111.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAATGGTTCGGTGCGGT...........................2211.00101000000000
....................CTTTGCGCGCGATTTGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCGGTGCGGTTCTGCGAGAA.................2311.00101000000000
droEug1
CAAAAGCGCATACTGAATAACTTTGCGCGCGATTTACCAGTCACTAATCGGTAGGGATTC-ACGATGTTATCAAGTCAATTTTCGCCAATACAATTTCATTTCAAGTATTTAATGCGGAAGTGGAATTTAGATAATTCGCAATTGTTATAATCTTTTGAATGTTACACTTATAACCAAACACCCCAGAAAATATTTTTTGATCGCAATTATGTTTGTAACATACTTAGTTATAACTTTTCATTGTTTAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--CGTGAAACATCCGCGTTTCAGCACAATGAACGGCTCGGTGAGGTTCTGTGAAAAGTGCAAAATAATCAAGCSizeHit CountTotal NormTotal
No Reads
droBia1
CAGAAGCGCATTCTCAACAACTTTGCACGAGACTTGCCTGTCACTAATCGGTGAGAATTT-ACCATGTCATCAAGTCCACATCCGCTAATTCCATTTGATTA--------ATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----ATATATTTGGTAATTGTTCGGCAAACATTTGATTGTACCTCTCTAACTAACTATATAGTTCATATTTATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGAAATACGGAAGTGGCAAA---------------------------------------------------------------------------------------------------------------AAAGC-TTCTTCAATTTCGAAAGAAATCTATTTAAAACTGTTATCAAGCGAAGAGCTAGTATAATAATATTTTTTGTTAAGGCCTTCAACTCACTGCAATCAGTAAAC--------CAAAGAAGGAAATATCAGAGTGTACCAAAATTCTTCCTTAAAATACTCCGCCTGCAATTTTATTTATA------------CTAAATTCACTTATTGTA-----------AATATTTATGATTTA-TCTCTTTCCAGTACAATGAACGGATCGGTGCGCTTCTGCGAAAAGTGTAAGATCATCAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
CAGAAACGCATTCTCAACAACTTTGCACGAGACTTGCCAGTCACTAATCGGTGAGAATTT-ACCATGTCATCCAGTTCAATACCACTAAAACCTTTTGATTA--------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----AGAAATTTTGTAATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATCAAACSizeHit CountTotal NormTotal
No Reads
droEle1
CAGAAACGCATTCTCAACAACTTTGCCCGTGATTTGCCAGTTACAAATCGGTGAGGACCT-ATTGTGTTATCAAGCAAAGTTCCGCTAGAAATATTTTATTACAAGCTTAACATGTGAAATTGAAATTTA--TTGTTCGC------------------------------------------CTG-------------------------------------ATTC---------------CTTTTTATTAGTATTTTTTATTTATAACTATAAAACTGGCAG-------------------------------------------------------------------------------------------------CCAAAGT--TGT---AATAAA---------------------TTGTATGCTTATCTCTTGCTATTGTTAGCAAAGTAAAACAGCATTAAGCGGTTTGTAAATTGTTTAATTCCATTCGATTTGTAATACATTTAAGATAGTCTTATTACAGTGCCAGCACAAATATGTTTAAGTCACAGTCATAACTATAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATC--TGTGAAATATTTGTTTTTCAGCACAATGAACGGCTCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAACSizeHit CountTotal NormTotal
No Reads
droRho1
CAGAAACGCATACTTAACAACTTTGCGCGCGATCTGCCAGTCACAAATCGGTGAGGATTAAATTAAGTTATCAAGCTCAGTTCCGCGAAATCTATTTCATTAGAAGCCTAG--------------------------CGC------------------------------------------TTA-------------------------------------ATTTAGTTTTTATTTTTTGTTTTTTATTA-------TTATTTTTAACTATA-AACTGTCAG-------------------------------------------------------------------------------------------------CCGAAGTGCTGTGGTCTTAAATAAGCAAATTAAATAGTTTTTTTACATACTTGTCTTTTGATATTGCGAACAAAGTATAAAAGCTATAA-----------------------------------------------------------------------------------------------------------------AAG----------------------------------------------------AAGGG-AATCATTTGTTATAGGAAATAATGTTTCTTAAATGAAAAAATGACTCAGTTAA--------------------------------------------------------------------------------------------------------------AATGAAAA--------CAAAATGAA----------AA--------GTACCTTATACA--TTTTA--------------------TAATGGGCATTTCG-------------GAAAAAATGTATTTAATC--CGTAAAATATTTGATTTTCAGCACAATGAACGGATCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAGCSizeHit CountTotal NormTotal
No Reads
droFic1
AGACAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATT--TCGGATTTA-TTGGTTTCCAGCACAATGAACGGCTCTGTGCGGTTCTGTGAGAAGTGTAAGATAATCAAGCSizeHit CountTotal NormTotal
No Reads
droKik1
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAT-----------AATGTT---TA-------ACTTTCCAGCACCATGAACGGTTCCGTGCGGTTCTGTGAGAAATGCAAAATCGTCAAGCSizeHit CountTotal NormTotal
No Reads
droAna3
AT--------------------------------TGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACATTTTTTGAA-----------TAT-----------------ATTTCAGAACAATGAACGGCTCTGTGCGATTCTGTGAGAAGTGCAAGATCATCAAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAACGGCTCTGTGC..............................1911.001010000
droBip1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGCACCATGAACGGATCTGTGCGATTCTGTGAGAAGTGCAAGATCGTCAAGCSizeHit CountTotal NormTotal
No Reads
dp5
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTATTTTGTAGCACAATGAACGGCTCTGTCCGGTTTTGTGAAAAGTGTAAGATCATTAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTCTGTCCGGTTTTGTGAAAAG................2512.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAATGAACGGCTCTGTCC..............................2111.0010010000000
droPer2
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTGTATTTTGTAGCACAATGAACGGCTCTGTCCGGTTTTGTGAAAAGTGTAAGATCATTAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCACAATGAACGGCTCTGTCCG.............................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAACGGCTCTGTCCGGTTTT........................2311.001010000
droWil2
ACGATATTTATT------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTACTCTACAGAACAATGAATGGCTCTGTCCGATTTTGTGAGAAATGTAAAATCATCAAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGAATGGCTCTGTCCGAT...........................2212.00202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTCTGTCCGATTTTGT......................2111.00100010
droVir3
CAGAAGCGCATTTTAAACAATTTTGCGCGCAATTTGCCGGTTACAAATCGGTGAGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................TTTGCGCGCAATTTGCCGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000002
............TTAAACAATTTTGCGCGCAATTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGCACAATCAATGGCTCTGTTAGATTCTGTGAGAAGTGCAAGATCATCAAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTCTGTTAGATTCTGTGAGAAGT...............2811.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCAATGGCTCTGTTAGATTCTGT......................2711.001100000
droGri2
CAAAAGCGGATTTTAAACAACTTTGCACGCAATTTGCCAGTCACAAATCGGTGAGTTTTT-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAGAGAGATAAGAG------------------------------------------------------------------------TTGTGCTCGGCTTGTCGAAGTGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCACTTGATATGCTTCCCCTTTACAGAAGGTGGAATAATTGCGAACTAATGTTCTTACTAC-----------------------------------------------------------------------ATAT---T--A-----CATCCACAGCACAATGAATGGCTCTGTGCGGTTCTGCGAGAAGTGCAAGATCATCAAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCGGTTCTGCGAGAAGTGCA............2411.00101
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGAGAAGTGCAAGATC.......1911.00101
...................ACTTTGCACGCAATTTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/19/2015 at 04:57 AM