ID:

dsi_13017

 Coordinate:

2r:10739737-10739886 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.4 -18.4

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CAACCAAAAGAAAGTGGAAATAAACTATAATATGGACCGCAAAAACATATAAAATGCATTAAAAACTTCAAAGCAAATGGGAGTAGATGCGCAAATAACCAGTTTTTATTATTCTTAAGTTAACTAATCCATTAAAATAATCACCTTTAATCAGTATTAACTTAAATAATCATTTCACTTCGTGTTGCTTGCAATTTCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGC
**************************************************....((((.............(((((...((((((((((..................((((((..((((((((.((....((((((.........))))))...))))))))))))))))))))).)))))...))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
.............................................................................TGGGAGTAGATGCGCAAATAAC....................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
......................................................TGCATTAAAAACTTCAAAGCAAATGGGA........................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0
............................................................................ATGGGAGTAGATGCATTAATAA........................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0
......................................................................................................................GTTAACCAATCCATTAAGA................................................................................................................. 19 2 2 0.50 1 0 1 0 0
.......................................................................AGCAATTGGGTGTAGCTGC................................................................................................................................................................ 19 3 20 0.35 7 0 0 7 0
..........................................................................AAATGGGAGTAGCTGTGCAAAG.......................................................................................................................................................... 22 3 4 0.25 1 0 0 0 1
..............................................................................................................................................................................................GCAGTGTCAGGTATGATCCA........................................ 20 3 4 0.25 1 0 0 1 0
.......................................................................AGCAATTGGGAGTAGCTAC................................................................................................................................................................ 19 3 18 0.11 2 0 0 1 1
...........................................................................................................................................................................GTTTCGCATCGTGTTGCTTG........................................................... 20 3 15 0.07 1 0 0 1 0
..............................................................................TGGAGTAGACGAGCAAATAA........................................................................................................................................................ 20 3 18 0.06 1 1 0 0 0
.......................................................................AGCAATTGGGCGTAGATAC................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

GTTGGTTTTCTTTCACCTTTATTTGATATTATACCTGGCGTTTTTGTATATTTTACGTAATTTTTGAAGTTTCGTTTACCCTCATCTACGCGTTTATTGGTCAAAAATAATAAGAATTCAATTGATTAGGTAATTTTATTAGTGGAAATTAGTCATAATTGAATTTATTAGTAAAGTGAAGCACAACGAACGTTAAAGTCCATACAAGGTGATGCAGTGTAGTGTACTTGATAAGCTTAAGTTTTCTGCG
**************************************************....((((.............(((((...((((((((((..................((((((..((((((((.((....((((((.........))))))...))))))))))))))))))))).)))))...))))))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 O002
Head
 O001
Testis
 GSM343915
embryo
 M024
male body		 M023
head
 SRR1275483
Male prepupae		 M025
embryo
 SRR1275485
Male prepupae		 SRR1275487
Male larvae
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGT......................... 21 0 1 3333612.00 3333612 1777808 1371004 172227 4877 5565 1559 60 348 67 78 10 7 2 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGT......................... 22 0 1 2137382.00 2137382 1088778 841693 197479 414 7335 1279 3 253 71 57 9 10 1 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGT......................... 20 0 1 1799850.00 1799850 883933 721204 128945 60868 2690 833 1124 209 22 16 3 0 0 1 0 1 1
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTGT......................... 19 0 1 167631.00 167631 79176 71377 12303 4192 300 73 141 25 20 23 0 0 0 1 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAGTGT......................... 23 1 1 93545.00 93545 40039 37471 15701 117 148 53 2 13 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGTA........................ 21 0 1 44417.00 44417 20986 16221 4056 2970 28 9 145 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TACAAGGTGATGCAGTGTAGTGT......................... 23 0 1 32004.00 32004 18121 11346 2371 3 132 22 0 4 4 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAGGTGATGCAGTGTAGTGT......................... 21 1 1 28989.00 28989 2085 1754 19545 5182 315 0 107 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGTA........................ 22 0 1 23388.00 23388 11949 9716 1498 190 21 4 5 3 0 1 0 0 0 0 1 0 0
...........................................................................................................................................................................................................TCAAGGTGATGCAGTGTAGTGT......................... 22 1 1 22627.00 22627 11921 9448 1189 14 47 6 0 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTTT......................... 21 1 1 19869.00 19869 11005 8333 495 4 30 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTTT......................... 22 1 1 12302.00 12302 6616 5120 532 0 33 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAAGGTGATGCAGTGTAGTGT......................... 21 1 1 12184.00 12184 6222 4475 1151 283 30 7 14 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTTT......................... 20 1 1 10096.00 10096 5374 4382 314 16 9 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTGATGCAGTGTAGTGT......................... 18 0 1 8911.00 8911 3971 3511 1323 67 14 5 2 1 8 9 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAAGGTGATGCAGTGTAGTGT......................... 22 1 1 8440.00 8440 900 756 5358 1327 76 0 22 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................AAACAAGGTGATGCAGTGTAGTGT......................... 24 1 1 6851.00 6851 2615 2723 1430 58 12 9 3 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGG......................... 21 1 1 6295.00 6295 3545 2693 50 0 5 0 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTGTA........................ 20 0 1 5885.00 5885 2882 2292 478 211 2 0 20 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTG............................... 16 0 1 4656.00 4656 784 600 3270 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTATTGT......................... 21 1 1 4193.00 4193 2327 1827 37 0 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGA......................... 21 1 1 4136.00 4136 2312 1747 73 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGG......................... 22 1 1 3837.00 3837 2128 1649 56 0 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAG............................ 18 0 1 3721.00 3721 90 99 3527 0 5 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGATGCAGTGTAGTGT......................... 17 0 1 3703.00 3703 292 227 3168 15 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTG............................... 15 0 1 3551.00 3551 637 502 2411 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGGGT......................... 21 1 1 3423.00 3423 1900 1479 27 2 15 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGT.............................. 17 0 1 3328.00 3328 1078 1145 1103 0 0 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGG......................... 20 1 1 3243.00 3243 1762 1436 44 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCAAGGTGATGCAGTGTAGTGT......................... 22 1 1 3084.00 3084 1317 1126 634 0 7 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTATTGT......................... 22 1 1 2983.00 2983 1685 1251 46 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGATGCAGTGTAGTGT......................... 16 0 1 2870.00 2870 17 11 2840 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTCT......................... 21 1 1 2807.00 2807 1173 898 725 1 4 4 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CCAAGGTGATGCAGTGTAGTGT......................... 22 1 1 2753.00 2753 1462 1044 240 0 3 4 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAG............................ 17 0 1 2742.00 2742 56 59 2626 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAG............................ 19 0 1 2654.00 2654 47 47 2553 0 7 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GAAGGTGATGCAGTGTAGTGT......................... 21 1 1 2604.00 2604 1311 979 171 116 25 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGA......................... 22 1 1 2552.00 2552 1374 1060 111 0 5 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATTCAGTGTAGTGT......................... 21 1 1 2481.00 2481 1317 1022 134 1 6 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TTAAGGTGATGCAGTGTAGTGT......................... 22 2 1 2461.00 2461 1356 963 128 7 4 3 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGC......................... 21 1 1 2437.00 2437 1243 916 271 0 5 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTTATGCAGTGTAGTGT......................... 21 1 1 2387.00 2387 1282 959 121 11 12 2 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CACAAGGTGATGCAGTGTAGTGT......................... 23 1 1 2317.00 2317 1199 760 343 1 10 2 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGT.............................. 16 0 1 2300.00 2300 696 597 1006 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTATTTT......................... 21 2 1 2284.00 2284 1321 963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAAGGTGATGCAGTGTAGTGTA........................ 22 1 1 2270.00 2270 1148 852 164 97 2 3 4 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTCT......................... 22 1 1 2258.00 2258 787 594 869 0 4 3 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGA......................... 20 1 1 2194.00 2194 1168 937 80 4 2 0 1 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAGGTGATGCAGTGTAGTGTA........................ 22 1 1 2175.00 2175 88 65 1348 641 13 0 20 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCGGTGTAGTGT......................... 21 1 1 2131.00 2131 1016 802 308 0 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTATTGT......................... 20 1 1 2104.00 2104 1138 920 30 16 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TAACAAGGTGATGCAGTGTAGTGT......................... 24 2 1 2082.00 2082 1104 805 165 1 5 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGGGATGCAGTGTAGTGT......................... 21 1 1 2031.00 2031 1130 865 12 3 21 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGGGT......................... 22 1 1 2015.00 2015 1140 833 27 0 15 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGGGT......................... 20 1 1 1715.00 1715 897 788 9 17 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGGAGTGTAGTGT......................... 21 1 1 1706.00 1706 973 711 19 0 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTTATGCAGTGTAGTGT......................... 22 1 1 1671.00 1671 882 714 61 2 11 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGGGATGCAGTGTAGTGT......................... 22 1 1 1655.00 1655 1001 602 16 0 35 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTCT......................... 20 1 1 1639.00 1639 594 438 594 13 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTT.......................... 20 1 1 1577.00 1577 814 647 107 1 3 5 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTAT......................... 21 1 1 1575.00 1575 604 425 542 0 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGC......................... 22 1 1 1524.00 1524 666 571 282 0 3 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGAAGGTGATGCAGTGTAGTGT......................... 22 1 1 1521.00 1521 792 602 69 32 26 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTA............................. 17 0 1 1511.00 1511 56 56 1399 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAATGTGATGCAGTGTAGTGT......................... 21 1 1 1477.00 1477 677 699 96 4 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AAAACAAGGTGATGCAGTGTAGTGT......................... 25 2 1 1460.00 1460 576 650 198 31 3 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTG.......................... 20 0 1 1402.00 1402 337 296 342 7 417 3 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCGGTGTAGTGT......................... 22 1 1 1400.00 1400 603 448 344 0 5 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTA............................. 18 0 1 1393.00 1393 62 107 1223 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATTCAGTGTAGTGT......................... 22 1 1 1362.00 1362 717 539 95 1 10 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTTATGCAGTGTAGTGT......................... 20 1 1 1339.00 1339 655 535 115 27 6 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGGAGTGT......................... 21 1 1 1305.00 1305 720 567 14 1 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGAAGTGTAGTGT......................... 21 1 1 1304.00 1304 740 537 15 1 11 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGGGATGCAGTGTAGTGT......................... 20 1 1 1299.00 1299 736 517 6 28 10 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGC......................... 20 1 1 1282.00 1282 596 491 182 11 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTATTTT......................... 22 2 1 1252.00 1252 743 509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTG.......................... 21 0 1 1236.00 1236 96 101 408 0 630 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGT.............................. 15 0 1 1228.00 1228 341 291 595 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTAT......................... 22 1 1 1221.00 1221 306 244 664 0 5 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTT.......................... 21 1 1 1199.00 1199 556 497 143 0 2 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCATTGTAGTGT......................... 21 1 1 1169.00 1169 650 494 21 2 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGT........................... 19 0 1 1165.00 1165 549 483 111 0 22 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCGGTGTAGTGT......................... 20 1 1 1156.00 1156 512 401 234 6 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTTTAGTGT......................... 21 1 1 1146.00 1146 596 460 79 9 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTATTTT......................... 20 2 1 1142.00 1142 625 517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGGTT......................... 21 2 1 1138.00 1138 620 518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGTAGTGTAGTGT......................... 21 1 1 1120.00 1120 570 408 135 3 2 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTA............................. 16 0 1 1113.00 1113 29 19 1065 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGGAGTGTAGTGT......................... 22 1 1 1112.00 1112 605 475 31 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGAGATGCAGTGTAGTGT......................... 21 1 1 1097.00 1097 589 457 42 1 8 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AAAAAGGTGATGCAGTGTAGTGT......................... 23 2 1 1078.00 1078 47 38 609 371 9 0 4 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATTCAGTGTAGTGT......................... 20 1 1 1065.00 1065 536 470 41 12 4 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TAGGTGATGCAGTGTAGTGT......................... 20 1 1 1061.00 1061 415 335 155 140 4 0 12 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGTTGATGCAGTGTAGTGT......................... 21 1 1 1043.00 1043 483 498 48 3 11 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATACAGTGTAGTGT......................... 21 1 1 1033.00 1033 519 368 143 1 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGCGT......................... 21 1 1 1023.00 1023 429 337 246 2 6 2 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGGTGCAGTGTAGTGT......................... 20 1 1 981.00 981 383 438 128 27 2 2 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CAAGTGATGCAGTGTAGTGT......................... 20 2 1 975.00 975 417 335 212 2 7 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAAGTGATGCAGTGTAGTGT......................... 21 1 1 939.00 939 416 346 162 0 15 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGCGATGCAGTGTAGTGT......................... 21 1 1 925.00 925 386 322 200 1 13 2 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTAT......................... 20 1 1 915.00 915 284 183 432 16 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGGAGTGTAGTGT......................... 20 1 1 906.00 906 501 374 19 12 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGCAGTGT......................... 21 1 1 890.00 890 393 315 176 2 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGAAGTGT......................... 21 1 1 876.00 876 462 395 18 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGAGATGCAGTGTAGTGT......................... 22 1 1 860.00 860 477 307 65 0 10 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GACAAGGTGATGCAGTGTAGTGT......................... 23 1 1 858.00 858 394 360 102 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTCAAGGTGATGCAGTGTAGTGT......................... 23 1 1 840.00 840 462 327 46 0 5 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGT........................... 20 0 1 840.00 840 395 316 96 1 31 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGAAGTGTAGTGT......................... 22 1 1 836.00 836 439 360 16 0 21 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGGTGCAGTGTAGTGT......................... 21 1 1 835.00 835 354 321 154 3 2 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGGAGTGT......................... 22 1 1 833.00 833 466 356 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGCGATGCAGTGTAGTGT......................... 22 1 1 832.00 832 322 235 261 0 10 3 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGGTGATGCAGTGTAGTGT......................... 22 2 1 822.00 822 347 252 156 64 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................ACAAGTGATGCAGTGTAGTGT......................... 21 3 1 794.00 794 306 259 216 0 10 3 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTT.......................... 19 1 1 777.00 777 371 323 67 11 0 3 0 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGTAGTGTAGTGT......................... 22 1 1 776.00 776 326 256 188 0 6 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTG.......................... 19 0 1 775.00 775 151 173 243 34 174 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATCCAGTGTAGTGT......................... 21 1 1 769.00 769 396 344 27 1 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTATAGTGT......................... 21 1 1 758.00 758 324 256 173 0 5 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTAATGCAGTGTAGTGT......................... 21 1 1 753.00 753 365 296 89 0 2 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGGTGCAGTGTAGTGT......................... 22 1 1 751.00 751 261 283 203 0 3 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTTT......................... 19 1 1 749.00 749 371 345 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATACAGTGTAGTGT......................... 22 1 1 747.00 747 303 249 189 0 5 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGCGTAGTGT......................... 21 1 1 721.00 721 277 206 217 2 18 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGAAGTGTAGTGT......................... 20 1 1 711.00 711 380 300 14 9 7 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAACGTGATGCAGTGTAGTGT......................... 21 1 1 703.00 703 330 320 47 0 6 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCATTGTAGTGT......................... 22 1 1 680.00 680 350 296 32 0 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGCGT......................... 22 1 1 678.00 678 217 192 267 0 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGAGGTGATGCAGTGTAGTGT......................... 21 1 1 674.00 674 134 130 404 1 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGAGATGCAGTGTAGTGT......................... 20 1 1 673.00 673 326 282 36 25 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGCAGTGT......................... 22 1 1 672.00 672 240 199 229 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAATGTGATGCAGTGTAGTGT......................... 22 1 1 670.00 670 319 289 59 1 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGGAGTGT......................... 20 1 1 656.00 656 365 277 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGCGTAGTGT......................... 22 1 1 655.00 655 197 154 278 0 26 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GAGGTGATGCAGTGTAGTGT......................... 20 1 1 652.00 652 106 93 441 9 1 0 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTATAGTGT......................... 22 1 1 648.00 648 243 168 232 0 4 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGTAGTGTAGTGT......................... 20 1 1 641.00 641 270 236 118 14 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTCATGCAGTGTAGTGT......................... 21 1 1 640.00 640 292 307 37 3 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ATAAGGTGATGCAGTGTAGTGT......................... 22 1 1 639.00 639 214 182 233 4 6 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGGTT......................... 22 2 1 623.00 623 340 283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGTTGATGCAGTGTAGTGT......................... 20 1 1 618.00 618 262 292 51 10 2 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTGGTGT......................... 21 1 1 616.00 616 208 154 247 0 7 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGT........................... 18 0 1 614.00 614 280 237 91 2 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGTTGATGCAGTGTAGTGT......................... 22 1 1 612.00 612 256 289 54 0 13 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCATTGTAGTGT......................... 20 1 1 607.00 607 306 257 27 15 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTTTAGTGT......................... 22 1 1 606.00 606 303 227 73 2 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGAAGTGT......................... 22 1 1 605.00 605 326 247 28 0 4 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTTTAGTGT......................... 20 1 1 599.00 599 268 240 67 22 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGCGT......................... 20 1 1 593.00 593 220 167 195 8 2 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGCGATGCAGTGTAGTGT......................... 20 1 1 589.00 589 259 164 147 15 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACGAGGTGATGCAGTGTAGTGT......................... 22 1 1 587.00 587 84 72 428 0 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGACGCAGTGTAGTGT......................... 21 1 1 583.00 583 236 179 164 1 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTCATGCAGTGTAGTGT......................... 22 1 1 574.00 574 257 273 40 1 2 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATACAGTGTAGTGT......................... 20 1 1 571.00 571 272 201 93 3 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAGTGATGCAGTGTAGTGT......................... 19 1 1 570.00 570 179 209 175 6 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAAGTGATGCAGTGTAGTGT......................... 22 1 1 568.00 568 223 173 166 0 6 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTACAAGGTGATGCAGTGTAGTGT......................... 24 1 1 553.00 553 305 180 61 0 5 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGAGT......................... 21 1 1 531.00 531 263 187 79 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAGTTT......................... 23 2 1 526.00 526 264 219 41 0 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGT................................ 15 0 1 517.00 517 206 139 170 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGTA........................ 23 0 1 512.00 512 185 148 173 0 6 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GATGCAGTGTAGTGT......................... 15 0 1 511.00 511 35 24 451 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAGGGTGATGCAGTGTAGTGT......................... 21 1 1 505.00 505 160 101 225 6 11 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AATGTGATGCAGTGTAGTGT......................... 20 1 1 500.00 500 231 222 41 6 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGCAGTGT......................... 20 1 1 499.00 499 183 153 153 7 2 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAGGGTGATGCAGTGTAGTGT......................... 22 1 1 488.00 488 109 89 286 0 4 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGAAGTGT......................... 20 1 1 475.00 475 266 190 15 3 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTATAGTGT......................... 20 1 1 472.00 472 166 139 157 7 1 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAACGTGATGCAGTGTAGTGT......................... 22 1 1 472.00 472 218 200 49 1 4 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTATGGT......................... 21 2 1 470.00 470 267 202 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGCGTAGTGT......................... 20 1 1 470.00 470 159 109 181 10 11 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAATGTAGTGT......................... 21 1 1 463.00 463 225 165 68 0 4 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AGGGTGATGCAGTGTAGTGT......................... 20 1 1 459.00 459 105 106 207 39 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAAGTGATGCAGTGTAGTGT......................... 20 1 1 456.00 456 193 152 98 10 2 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTAATGCAGTGTAGTGT......................... 22 1 1 453.00 453 219 160 72 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AAAAACAAGGTGATGCAGTGTAGTGT......................... 26 3 1 453.00 453 170 229 47 5 0 2 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTCATGCAGTGTAGTGT......................... 20 1 1 437.00 437 185 204 38 8 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATCCAGTGTAGTGT......................... 22 1 1 436.00 436 232 172 28 0 0 3 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGGGTAGTGT......................... 21 1 1 427.00 427 215 193 17 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTGGTGT......................... 22 1 1 422.00 422 98 71 250 0 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGAGTAGTGT......................... 21 1 1 421.00 421 220 160 37 1 3 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGCTGATGCAGTGTAGTGT......................... 21 1 1 419.00 419 172 172 71 1 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGCTGATGCAGTGTAGTGT......................... 22 1 1 418.00 418 148 159 107 0 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGACGCAGTGTAGTGT......................... 22 1 1 391.00 391 142 77 167 0 3 0 0 1 0 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCTGTGTAGTGT......................... 21 1 1 391.00 391 199 145 43 2 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAATGT......................... 21 1 1 388.00 388 185 121 74 1 7 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTTG......................... 21 2 1 384.00 384 208 172 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAATGTAGTGT......................... 22 1 1 379.00 379 154 117 103 0 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATCCAGTGTAGTGT......................... 20 1 1 375.00 375 196 156 21 2 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCCGTGTAGTGT......................... 21 1 1 374.00 374 196 161 13 2 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAATGT......................... 22 1 1 366.00 366 122 110 122 0 12 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTG............................... 17 1 1 362.00 362 35 37 290 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTAATGCAGTGTAGTGT......................... 20 1 1 357.00 357 158 145 44 7 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGAGT......................... 22 1 1 356.00 356 159 102 94 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCACTGTAGTGT......................... 21 1 1 354.00 354 190 144 18 0 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGACGCAGTGTAGTGT......................... 20 1 1 354.00 354 134 108 102 7 1 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTGATGCAGTGTAGTGTA........................ 19 0 1 340.00 340 140 127 60 9 1 0 3 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGAGT......................... 20 1 1 339.00 339 114 116 76 32 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGTC........................ 22 1 1 335.00 335 136 123 67 1 8 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTACTGT......................... 22 1 1 333.00 333 161 148 18 0 6 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTGGTGT......................... 20 1 1 332.00 332 78 61 183 8 2 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGATGATGCAGTGTAGTGT......................... 21 1 1 326.00 326 124 95 105 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGCTGATGCAGTGTAGTGT......................... 20 1 1 321.00 321 113 145 57 6 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TTTAAGGTGATGCAGTGTAGTGT......................... 23 2 1 317.00 317 184 112 17 3 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAG............................ 16 0 1 313.00 313 10 11 292 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTTA......................... 21 2 1 310.00 310 186 118 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTACTGT......................... 21 1 1 302.00 302 164 124 12 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCACTGTAGTGT......................... 22 1 1 302.00 302 135 135 28 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGAGTAGTGT......................... 22 1 1 298.00 298 154 100 42 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AACGTGATGCAGTGTAGTGT......................... 20 1 1 289.00 289 133 123 23 8 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAATGTAGTGT......................... 20 1 1 286.00 286 110 102 58 14 1 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGGTT......................... 20 2 2 279.00 558 305 253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAATGT......................... 20 1 1 279.00 279 101 81 66 26 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGTC........................ 21 1 1 278.00 278 119 96 54 8 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGGGTAGTGT......................... 22 1 1 269.00 269 141 109 17 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGGGTAGTGT......................... 20 1 1 266.00 266 137 104 7 16 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCTGTGTAGTGT......................... 22 1 1 262.00 262 123 83 52 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTATGGT......................... 22 2 1 245.00 245 139 105 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGATGATGCAGTGTAGTGT......................... 22 1 1 243.00 243 76 47 119 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTTC......................... 21 2 1 243.00 243 118 123 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTCTAGTGT......................... 21 1 1 235.00 235 99 105 29 0 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTTG......................... 22 2 1 232.00 232 135 93 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGAGTAGTGT......................... 20 1 1 232.00 232 100 84 30 17 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAGGTGATGCAGTGTAG............................ 18 1 1 231.00 231 1 0 230 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCTGTGTAGTGT......................... 20 1 1 224.00 224 99 78 43 3 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTCTAGTGT......................... 22 1 1 218.00 218 85 72 56 0 5 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CAGGTGATGCAGTGTAGTGT......................... 20 1 1 215.00 215 79 84 44 8 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TTTCAAGGTGATGCAGTGTAGTGT......................... 24 2 1 215.00 215 112 85 17 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTATGGT......................... 20 2 1 214.00 214 126 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TGCAAGGTGATGCAGTGTAGTGT......................... 23 1 1 213.00 213 119 69 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTTGTGT......................... 21 1 1 212.00 212 98 83 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTGG......................... 19 1 1 207.00 207 112 94 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AAAAAAGGTGATGCAGTGTAGTGT......................... 24 2 1 206.00 206 8 4 86 106 1 0 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TGAAGGTGATGCAGTGTAGTGT......................... 22 2 1 203.00 203 83 71 22 26 1 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAG............................ 20 1 1 196.00 196 1 2 192 0 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGAAGCAGTGTAGTGT......................... 21 1 1 195.00 195 95 88 10 0 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTTG......................... 20 2 1 192.00 192 102 88 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTACTGT......................... 20 1 1 191.00 191 87 76 15 9 3 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTATGTT......................... 21 3 1 191.00 191 100 91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GAACAAGGTGATGCAGTGTAGTGT......................... 24 2 1 187.00 187 97 73 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TACAAGGTGATGCAGTGTAGTTT......................... 23 1 1 185.00 185 104 72 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCACTGTAGTGT......................... 20 1 1 184.00 184 85 74 18 7 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTCTAGTGT......................... 20 1 1 182.00 182 63 64 38 17 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCCGTGTAGTGT......................... 22 1 1 181.00 181 79 97 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTATTGT......................... 19 1 1 181.00 181 89 89 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GAAAGGTGATGCAGTGTAGTGT......................... 22 2 1 173.00 173 27 22 90 32 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCCGTGTAGTGT......................... 20 1 1 172.00 172 91 69 7 3 0 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CAACAAGGTGATGCAGTGTAGTGT......................... 24 2 1 172.00 172 71 79 20 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTGTC........................ 23 1 1 172.00 172 43 27 93 1 8 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGATGATGCAGTGTAGTGT......................... 20 1 1 169.00 169 42 42 81 3 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGT.............................. 18 1 1 166.00 166 41 45 80 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAGTGG......................... 23 2 1 165.00 165 83 78 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGTTGCAGTGTAGTGT......................... 21 1 1 161.00 161 62 58 37 0 3 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CAAAGGTGATGCAGTGTAGTGT......................... 22 2 1 160.00 160 52 42 63 2 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGAGGCAGTGTAGTGT......................... 21 1 1 157.00 157 88 59 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTTA......................... 22 2 1 157.00 157 83 68 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTTGTGT......................... 22 1 1 156.00 156 66 46 44 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTTATGCAGTGTAGTGT......................... 19 1 1 154.00 154 76 64 13 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTTA......................... 20 2 1 149.00 149 78 65 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TCAAGGTGATGCAGTGTAGTTT......................... 22 2 1 144.00 144 75 63 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGGTGCAGTGTAGTGT......................... 19 1 1 142.00 142 61 68 11 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTTGTGT......................... 20 1 1 135.00 135 65 35 31 4 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAAAAGGTGATGCAGTGTAGTGT......................... 23 1 1 135.00 135 34 33 39 27 2 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTATGTT......................... 22 3 1 133.00 133 76 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTAGGTGATGCAGTGTAGTGT......................... 21 1 1 132.00 132 35 29 67 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTGA......................... 19 1 1 132.00 132 63 64 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................ATCAAGGTGATGCAGTGTAGTGT......................... 23 2 1 130.00 130 55 67 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ATGGTGATGCAGTGTAGTGT......................... 20 1 1 130.00 130 29 43 53 5 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGATGCAGTGTAGTTC......................... 22 2 1 129.00 129 72 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGGGT......................... 19 1 1 128.00 128 69 56 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGATGCAGTGTAGTGTA........................ 18 0 1 128.00 128 12 9 104 0 0 0 0 0 1 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTCT......................... 19 1 1 128.00 128 40 35 51 2 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGTTGCAGTGTAGTGT......................... 22 1 1 127.00 127 38 40 43 0 6 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTATTGT......................... 23 2 1 127.00 127 69 51 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGGGTAGTTT......................... 21 2 1 126.00 126 75 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CATGGTGATGCAGTGTAGTGT......................... 21 1 1 123.00 123 48 29 43 3 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTTTA........................ 21 1 1 123.00 123 74 44 1 2 0 0 2 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAGTCT......................... 23 2 1 122.00 122 31 25 66 0 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TTTACAAGGTGATGCAGTGTAGTGT......................... 25 2 1 121.00 121 64 46 8 0 3 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACATGGTGATGCAGTGTAGTGT......................... 22 1 1 113.00 113 26 34 53 0 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAGGTGATGCAGTGTA............................. 17 1 1 113.00 113 0 2 111 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCGGTGTAGTGT......................... 19 1 1 112.00 112 47 37 26 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TCAAGGTGATGCAGTGTAGTG.......................... 21 1 1 109.00 109 4 4 99 0 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTAGTGC......................... 19 1 1 106.00 106 40 41 24 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................CAAGGTGATGCAGTGTAGTGTACTT..................... 25 0 1 106.00 106 72 33 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATGCAGTGTA............................. 15 0 1 105.00 105 1 5 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACTAGGTGATGCAGTGTAGTGT......................... 22 1 1 103.00 103 28 18 56 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGAAGCAGTGTAGTGT......................... 20 1 1 103.00 103 48 33 15 5 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................TAAACAAGGTGATGCAGTGTAGTGT......................... 25 2 1 102.00 102 34 58 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGAAGCAGTGTAGTGT......................... 22 1 1 100.00 100 44 39 16 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................ATACAAGGTGATGCAGTGTAGTGT......................... 24 0 1 99.00 99 40 39 17 0 1 0 0 0 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGTGATTCAGTGTAGTGT......................... 19 1 1 99.00 99 49 44 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTAGTGA......................... 23 2 1 98.00 98 58 33 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................AACAAGGTGATGCAGTGTA............................. 19 1 1 97.00 97 2 3 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AAAAGGTGATGCAGTGTAGTGTA........................ 23 1 1 96.00 96 4 2 60 30 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGTTGCAGTGTAGTGT......................... 20 1 1 96.00 96 26 41 26 3 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTAGGTGATGCAGTGTAGTGT......................... 21 2 1 90.00 90 30 43 9 6 0 0 2 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................ACAAGGTGAGGCAGTGTAGTGT......................... 22 1 1 88.00 88 48 25 6 0 9 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................AAGGTGATGCAGTGTAGTGTG........................ 21 1 1 88.00 88 42 27 17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AAAGGTGATGCAGTGT.............................. 16 1 2 87.50 175 35 29 111 0 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AGGGGATGCAGTGTAGTGT......................... 19 1 1 86.00 86 51 35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10739687-10739936 + dsi_13017 CAACCAAAAGAAAGTGGAAATAAACTATAATAT-----------------------------------------------GGACCGCAAAAACATATAAAATGC-------ATTAAAAACTTCAAAGCAAATGGGAGTAGATGCGC------------------------------AAATAACCAGTT-----------------------------------TTTA-----------------------------TTA-TTCTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATTAA-AATAATCACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GTATTAACTTAAATAATCATT--TCACTTCGT---GTTGCTT-GCAATTTCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGC
droSec2 scaffold_1:7540406-7540654 + CAACCAAAAGAAAGTGGAAATAAGCTATAATAT-----------------------------------------------GGACCGCAAAAACAT-TAAAATGC-------ATTAAAAACTACAAAGCAAATGGGAGTAGATGCGC------------------------------AAATAGCCAGTT-----------------------------------TTTA-----------------------------TTA-TTTTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATTAA-AATAAGCACATTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GTATTAACTTAAATAATCGTT--TCACTTCGT---GCTGCTT-GCAATTTCGGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGC
dm3 chr2R:10032666-10032916 + CAACCAACAGAAACTAGAAATAAACTATAATAT-----------------------------------------------AGTCCGCAAAAACATATAAAATGC-------ATTAAAAACTTCAAAACAAATGACAGTAGATATGA------------------------------AATTAACCAGTT-----------------------------------TTTA-----------------------------TTGCTTTTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATAAA-AATAAACACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GCGTTACCTTAAATAATCGTT--TCACTTCGT---GTTGCTT-GTAATTTCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGC
droEre2 scaffold_4845:15805124-15805381 - CAACCAAAGGGAGCTATAAACAAACTATAATAT-----------------------------------------------AGACCGCAGGTACAACAAATATGC-------A------------ATGTAAATGAGAGTAGATGTAC------------------------------A-----------GT-------------------------------------CTTTTCGTGAGATTGCCAAACACATTACA----------------AT-----------------TAACTGG-----TTTCGATGTTTCTGTTTTGT--------------------------------------------------TAACCAATCGTTAAT-GTTAACTACCTTTA---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCATTTATGCCTACAT---GTTGCTT-GCAACACCAGGTATGTTCCACTACGTCACATCACATGAACTGTTCGAATTCAAAAGACGC
droYak3 2R:9968676-9968986 + CAAACAAAGGAAACTAAATATAAACTATGATAT-----------------------------------------------AGACCGTAAGAACAAGAAATATTTAATAAGCATTAA-------------------AGTAAATGTAC------------------------------A-----------CT-------------------------------------CTTTTCATGAAATTTTCAAGCACTATACA---------------AGT-----------------TGTCTGG-----TTTCTATGTTTCTGTTTGGTTTT----------TGAGGAC------------ACCA-AGTATAAAAGCTGTAACTAATCCCTAAT-ATTAAGCACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT--TTAATTAACA-TAACCAACTTAAATAGTCGCC--TTACTCCAT---GTTGCTT-GCAACACCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGC
droEug1 scf7180000409462:2807400-2807731 - CAACGAAAGGATTAATGAAATAAAATATAGTAAGAGTATAGTATCAAGT------TTCTGTTACATGA------------AAAACGC--------------------------TAGAAACTAAGTTT-------------------ACATA-AAACAAATTCCT-----------------------------------------------------------------TTATTAAAAT-----------------------------TTT-------------AGTTAGTTTTTAGAAA-----AA---------AAA-GCTTTTTAAA------TAAAGTCATCAAGTCACAGATATAAATTCCATTGCTTAAACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATATG--------------------------------------GACTTTT--------------------------------------AAGAATTCATTTTCATTACTTAATTTAACCAGTTC----------TTCA-TTATTCAAAAACGATTT--CCACTTTTT---GTTGTCT-GCAATTCTGGGTATGTTCCACTACGTCACATCACATGAACTAATCAAATT-AAAAAGCGC
droBia1 scf7180000301592:177980-178321 + AGATCTCCGAAATATGAGAATATATTGGTATAA-------------ATTGGTATATATTGGTATTTGAAAATATTTAATTTGACTATAAGCACAATAAAGTTGC-------ATAAAACACTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTCGTTTTAATTATGATTGTAGGAGTAATCGAGTATCCGTAAATATTCAAGATAATAATTCTTATAAACCTTATACATTTTTAAACCCTTTAATTTAATGACT--------------------------------------TACTTTTTGTAATTTGAACCAATTATTAT---------------------------------------------CAGCTT----------TTTA-TTAGTCATATGTTAATT--TCTTTTCGT---GTTGCCT-GCGACCCCAGGTATGTTCCACTACGTCACATCACATGAAATAGTTAAATT-AAAAAACAC
droTak1 scf7180000414188:5758-5902 + TGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTATCATTT-----------------------------------ATTA-----------------------------TAA-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA--------------------CAATTGGTCAAATTAATAAAT------------------------------------------------------------GTA-TTACTTAAATACTATTT--TCACTTTAT---GTTGTTT-GCAACTCCAGGTATGTTCCACTACGTCACATCACATGAATTAATCAAATT-AAAAAACAC
droEle1 scf7180000491349:838914-839143 - CAAGAAAATAAAAGTCA----------T----------------------------------------------------------------------------------------------------------------------------AAATA------T---------------------------------------------TTATTTGTATTTAT-------------------------------------------------------------TGTATTGTATTGAGACAAAAG--------------------------------------------------------------------------------------------CCTTAA---------AA-------------------------------CCTA------------------------------------------------------------------------CA-------------------------------------------A---------------------------------------------AAATATTATAATTCAAATAAAAAAATTGTGAAGTTTTTCAGCAAATAAAAAAT---------------AAATTAG-------A----------TTTG-TAACTCAGTTACTATTA--ACACCTTAT---GTTGTTT-GCAAATCCAGGTATGTTCCACTACGTCACATCACATGAACTATTATAATTA--AAAATAC
droRho1 scf7180000777200:347906-348159 + GAAAGAG-----TCAGGAAATATAGTGTTATTT-----------------------------------------------ACAAGGCAAAAA--------------------------ACAAAAATT-------------------TCAAATAAGTA----C-------------------------------------------AC--ATGTTTTTACGATT-------------------------------------------------------------TATATTTTGTTTAGA-----AAGTATTTTTCTACC---------------------------------------T-ATTGTT-AAGCTTTAATTAATTAACAAATAATA-ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTAATTTGTTC----------ATTA-TAACATAATTATTGTTA--TCACTTTAT---GTTGACT-GCGATTCCAGGTATGTTCCACTACGTCACATCACATGAACTATTCAAGTT-AAAAAACAC
droFic1 scf7180000453948:394588-394860 - TAAACTAAATTAATTATAAATAAACATTAA----------------------------------------------------------------------------------------ACTTAAATG-------------------CCAAAGAAGTAAATGCAT---------------------------------------------TTGTTTATTTTTAT-------------------------------------------------------------TATTTTTTTCTAGGAA-----AA---------TCC-GATTCTTGTAAAAAAAAATGGTTGTTGTATCACAAATCA-ATTGAAATTGCTGCAATTTATTAACAA--------------------------------------------------------------------AGCTTTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----------------------------ATTCCA-------T----------TCTA-TGGCTTAAATAAGATTT--TCACTGCGT---GTTGTTT-GTTGTTCCAGGCATGTTCCACTACGTCACATCACATGAACTATTTGAACC-TAAAACCAC
droKik1 scf7180000302385:160684-160936 + CAAAGAAT-----TT-----------------------------------------------------------------------------------------------------------------------------------ACAAAAAAATATTTACCTTTATTTAGAGTA------------ATTTTTTCTTTAAGTTCATAA----------------CCCTTTTCTTAATT-----------------------------TTTATT-----------------TATTTGG-----AAACAATGTTTATATTTTA-------------------------------------------------------------------------TGATTTTA---------ATACAAATTTCTTGGGAATATATTTTAGCCTTC----------------------------------------------------------------------------CA-------------------------------------------A-----------------------------------------------------------------------------------------TAT-----------------------------------TTTTA---------TTAACCTTATATAGATAAT--TCACTTTTT---GGTGTTG-GCCACCTCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAAAA-GTCAAACAC
droAna3 scaffold_13266:5886659-5886845 - GTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-----------------------------TTTCTCTTAAAGCTTATTAATTCAAATA----------TTAAACTAAAAACTTTATT------------------------------------------------------------------------TAA-AATAAATGTATTTA---------AT-----------------------AAGCCATA----------------------------------------------------------------------------AA-------------------------------------------A-----------------------------------------------------------------------------------------GTT-----------------------------------AATTA---------TTTCACTTATTAAATTTTG--TCACTTTTT---GTTGTTA-GGAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAATAAAAAAAACAC
droBip1 scf7180000395839:44715-44891 - TGATTACTGGGAGCTAA-TAAGGGCTTTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACTAAAGACTTTATT------------------------------------------------------------------------TTA-TA----TATTTTATGTGCATTTATT-----------------------AAGCTATA----------------------------------------------------------------------------CA-------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------AAATTTAAAAAATTTCA--TCACTTTTT---GTTGTTA-AGAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAGTC-AGAAAACAC
dp5 3:2729179-2729350 + AGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA-----------------------------TTA-GTTTTAAC------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTATTATGGCATTGTAATGATTATTTGTGATCAATTGTATAAACTATGAACTGTTTTCGTAAGCTAAAGATTCC-------------------------------------------------------ATGT--AC-ATTTCT---GTTGCTG-ACAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAA-----AAGAAAC
droPer2 scaffold_2:2918554-2918855 + CTGCTTGT---TTGTGGAACTG---------------------------------------------------------------------------------------------------------------------------------------CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAATA---------GA-------------------------------CAGCTTAAAGGTTTAAGCTACTTGTTTGAAGTGTT--------------------------GCTTTCGAATACTTTCCAGATTTCGATAAGATTTCATTTAAGACAGTTCGAAGCCCTTCTGTTTAGTATCTATTAGTTTTAACTGGTATTATTATGGCATTGTAATGATTATTTGTGATCAATTGTATAAACTATGAACTGTTTTCGTAAGCTAAAGATTCC-------------------------------------------------------ATGT--AC-ATTTCT---GTTGCTG-ACAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAA-----AAGAAAC
droWil2 scf2_1100000004558:1541189-1541292 - AGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTA---------AA-------------------------------CTGTAAAAAAGGTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCT--TTCCTTCTT---GATGACTTTAAAGCTCAGGAATGTTCCACTACGTCACATCACATGAACTATGA----------AATAT
droVir3 scaffold_12875:1889399-1889470 - C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCGCTGTGGCTG-CAAACGTCAGGAATGTTCCACTACGTCACATCACATGAAATATGAA-AT-----GAACGC
droMoj3 scaffold_6496:23382308-23382361 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGCCAGGAATGTTCCACTACGTCACATCACATGAAATATGA--AATC----AACGC
droGri2 scaffold_15112:3992621-3992687 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTT---GTTGTGG-GAAACGTCAGGAATGTTCCACTACGTCACATCACATGAAATATGAA-ATTC----AAGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAACCAAAAGAAAGTGGAAATAAACTATAATAT-----------------------------------------------GGACCGCAAAAACATATAAAATGC-------ATTAAAAACTTCAAAGCAAATGGGAGTAGATGCGC------------------------------AAATAACCAGTT-----------------------------------TTTA-----------------------------TTA-TTCTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATTAA-AATAATCACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GTATTAACTTAAATAATCATT--TCACTTCGT---GTTGCTT-GCAATTTCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................TGGGAGTAGATGCGC------------------------------AAATAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
.....................................................................................................TGC-------ATTAAAAACTTCAAAGCAAATGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
droSec2
CAACCAAAAGAAAGTGGAAATAAGCTATAATAT-----------------------------------------------GGACCGCAAAAACAT-TAAAATGC-------ATTAAAAACTACAAAGCAAATGGGAGTAGATGCGC------------------------------AAATAGCCAGTT-----------------------------------TTTA-----------------------------TTA-TTTTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATTAA-AATAAGCACATTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GTATTAACTTAAATAATCGTT--TCACTTCGT---GCTGCTT-GCAATTTCGGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CAACCAACAGAAACTAGAAATAAACTATAATAT-----------------------------------------------AGTCCGCAAAAACATATAAAATGC-------ATTAAAAACTTCAAAACAAATGACAGTAGATATGA------------------------------AATTAACCAGTT-----------------------------------TTTA-----------------------------TTGCTTTTTAAG------------------------------------------------------T--------------------------------------------------TAACTAATCCATAAA-AATAAACACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA---------------GCGTTACCTTAAATAATCGTT--TCACTTCGT---GTTGCTT-GTAATTTCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................CAGTAGATATGA------------------------------AATTAACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACGTCACATCACAT........................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------GCGTTACCTTAAATAATCGT...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAACCAAAGGGAGCTATAAACAAACTATAATAT-----------------------------------------------AGACCGCAGGTACAACAAATATGC-------A------------ATGTAAATGAGAGTAGATGTAC------------------------------A-----------GT-------------------------------------CTTTTCGTGAGATTGCCAAACACATTACA----------------AT-----------------TAACTGG-----TTTCGATGTTTCTGTTTTGT--------------------------------------------------TAACCAATCGTTAAT-GTTAACTACCTTTA---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCATTTATGCCTACAT---GTTGCTT-GCAACACCAGGTATGTTCCACTACGTCACATCACATGAACTGTTCGAATTCAAAAGACGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
CAAACAAAGGAAACTAAATATAAACTATGATAT-----------------------------------------------AGACCGTAAGAACAAGAAATATTTAATAAGCATTAA-------------------AGTAAATGTAC------------------------------A-----------CT-------------------------------------CTTTTCATGAAATTTTCAAGCACTATACA---------------AGT-----------------TGTCTGG-----TTTCTATGTTTCTGTTTGGTTTT----------TGAGGAC------------ACCA-AGTATAAAAGCTGTAACTAATCCCTAAT-ATTAAGCACCTTTA---------AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT--TTAATTAACA-TAACCAACTTAAATAGTCGCC--TTACTCCAT---GTTGCTT-GCAACACCAGGTATGTTCCACTACGTCACATCACATGAACTATTCGAATTCAAAAGACGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
CAACGAAAGGATTAATGAAATAAAATATAGTAAGAGTATAGTATCAAGT------TTCTGTTACATGA------------AAAACGC--------------------------TAGAAACTAAGTTT-------------------ACATA-AAACAAATTCCT-----------------------------------------------------------------TTATTAAAAT-----------------------------TTT-------------AGTTAGTTTTTAGAAA-----AA---------AAA-GCTTTTTAAA------TAAAGTCATCAAGTCACAGATATAAATTCCATTGCTTAAACT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATATG--------------------------------------GACTTTT--------------------------------------AAGAATTCATTTTCATTACTTAATTTAACCAGTTC----------TTCA-TTATTCAAAAACGATTT--CCACTTTTT---GTTGTCT-GCAATTCTGGGTATGTTCCACTACGTCACATCACATGAACTAATCAAATT-AAAAAGCGCSizeHit CountTotal NormTotal
No Reads
droBia1
AGATCTCCGAAATATGAGAATATATTGGTATAA-------------ATTGGTATATATTGGTATTTGAAAATATTTAATTTGACTATAAGCACAATAAAGTTGC-------ATAAAACACTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAACTCGTTTTAATTATGATTGTAGGAGTAATCGAGTATCCGTAAATATTCAAGATAATAATTCTTATAAACCTTATACATTTTTAAACCCTTTAATTTAATGACT--------------------------------------TACTTTTTGTAATTTGAACCAATTATTAT---------------------------------------------CAGCTT----------TTTA-TTAGTCATATGTTAATT--TCTTTTCGT---GTTGCCT-GCGACCCCAGGTATGTTCCACTACGTCACATCACATGAAATAGTTAAATT-AAAAAACACSizeHit CountTotal NormTotal
No Reads
droTak1
TGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTATCATTT-----------------------------------ATTA-----------------------------TAA-TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACA--------------------CAATTGGTCAAATTAATAAAT------------------------------------------------------------GTA-TTACTTAAATACTATTT--TCACTTTAT---GTTGTTT-GCAACTCCAGGTATGTTCCACTACGTCACATCACATGAATTAATCAAATT-AAAAAACACSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGAAAATAAAAGTCA----------T----------------------------------------------------------------------------------------------------------------------------AAATA------T---------------------------------------------TTATTTGTATTTAT-------------------------------------------------------------TGTATTGTATTGAGACAAAAG--------------------------------------------------------------------------------------------CCTTAA---------AA-------------------------------CCTA------------------------------------------------------------------------CA-------------------------------------------A---------------------------------------------AAATATTATAATTCAAATAAAAAAATTGTGAAGTTTTTCAGCAAATAAAAAAT---------------AAATTAG-------A----------TTTG-TAACTCAGTTACTATTA--ACACCTTAT---GTTGTTT-GCAAATCCAGGTATGTTCCACTACGTCACATCACATGAACTATTATAATTA--AAAATACSizeHit CountTotal NormTotal
No Reads
droRho1
GAAAGAG-----TCAGGAAATATAGTGTTATTT-----------------------------------------------ACAAGGCAAAAA--------------------------ACAAAAATT-------------------TCAAATAAGTA----C-------------------------------------------AC--ATGTTTTTACGATT-------------------------------------------------------------TATATTTTGTTTAGA-----AAGTATTTTTCTACC---------------------------------------T-ATTGTT-AAGCTTTAATTAATTAACAAATAATA-ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTTAATTTGTTC----------ATTA-TAACATAATTATTGTTA--TCACTTTAT---GTTGACT-GCGATTCCAGGTATGTTCCACTACGTCACATCACATGAACTATTCAAGTT-AAAAAACACSizeHit CountTotal NormTotal
No Reads
droFic1
TAAACTAAATTAATTATAAATAAACATTAA----------------------------------------------------------------------------------------ACTTAAATG-------------------CCAAAGAAGTAAATGCAT---------------------------------------------TTGTTTATTTTTAT-------------------------------------------------------------TATTTTTTTCTAGGAA-----AA---------TCC-GATTCTTGTAAAAAAAAATGGTTGTTGTATCACAAATCA-ATTGAAATTGCTGCAATTTATTAACAA--------------------------------------------------------------------AGCTTTGTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----------------------------ATTCCA-------T----------TCTA-TGGCTTAAATAAGATTT--TCACTGCGT---GTTGTTT-GTTGTTCCAGGCATGTTCCACTACGTCACATCACATGAACTATTTGAACC-TAAAACCACSizeHit CountTotal NormTotal
No Reads
droKik1
CAAAGAAT-----TT-----------------------------------------------------------------------------------------------------------------------------------ACAAAAAAATATTTACCTTTATTTAGAGTA------------ATTTTTTCTTTAAGTTCATAA----------------CCCTTTTCTTAATT-----------------------------TTTATT-----------------TATTTGG-----AAACAATGTTTATATTTTA-------------------------------------------------------------------------TGATTTTA---------ATACAAATTTCTTGGGAATATATTTTAGCCTTC----------------------------------------------------------------------------CA-------------------------------------------A-----------------------------------------------------------------------------------------TAT-----------------------------------TTTTA---------TTAACCTTATATAGATAAT--TCACTTTTT---GGTGTTG-GCCACCTCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAAAA-GTCAAACACSizeHit CountTotal NormTotal
No Reads
droAna3
GTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG-----------------------------TTTCTCTTAAAGCTTATTAATTCAAATA----------TTAAACTAAAAACTTTATT------------------------------------------------------------------------TAA-AATAAATGTATTTA---------AT-----------------------AAGCCATA----------------------------------------------------------------------------AA-------------------------------------------A-----------------------------------------------------------------------------------------GTT-----------------------------------AATTA---------TTTCACTTATTAAATTTTG--TCACTTTTT---GTTGTTA-GGAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAATAAAAAAAACACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGATTACTGGGAGCTAA-TAAGGGCTTTAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAACTAAAGACTTTATT------------------------------------------------------------------------TTA-TA----TATTTTATGTGCATTTATT-----------------------AAGCTATA----------------------------------------------------------------------------CA-------------------------------------------A-----------------------------------------------------------------------------------------------------------------------------------------------AAATTTAAAAAATTTCA--TCACTTTTT---GTTGTTA-AGAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAGTC-AGAAAACACSizeHit CountTotal NormTotal
No Reads
dp5
AGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTA-----------------------------TTA-GTTTTAAC------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTATTATTATGGCATTGTAATGATTATTTGTGATCAATTGTATAAACTATGAACTGTTTTCGTAAGCTAAAGATTCC-------------------------------------------------------ATGT--AC-ATTTCT---GTTGCTG-ACAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAA-----AAGAAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CTGCTTGT---TTGTGGAACTG---------------------------------------------------------------------------------------------------------------------------------------CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAATA---------GA-------------------------------CAGCTTAAAGGTTTAAGCTACTTGTTTGAAGTGTT--------------------------GCTTTCGAATACTTTCCAGATTTCGATAAGATTTCATTTAAGACAGTTCGAAGCCCTTCTGTTTAGTATCTATTAGTTTTAACTGGTATTATTATGGCATTGTAATGATTATTTGTGATCAATTGTATAAACTATGAACTGTTTTCGTAAGCTAAAGATTCC-------------------------------------------------------ATGT--AC-ATTTCT---GTTGCTG-ACAACGCCAGGAATGTTCCACTACGTCACATCACATGAACTATTCAAA-----AAGAAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTA---------AA-------------------------------CTGTAAAAAAGGTTTAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCT--TTCCTTCTT---GATGACTTTAAAGCTCAGGAATGTTCCACTACGTCACATCACATGAACTATGA----------AATATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCGCTGTGGCTG-CAAACGTCAGGAATGTTCCACTACGTCACATCACATGAAATATGAA-AT-----GAACGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACGCCAGGAATGTTCCACTACGTCACATCACATGAAATATGA--AATC----AACGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTT---GTTGTGG-GAAACGTCAGGAATGTTCCACTACGTCACATCACATGAAATATGAA-ATTC----AAGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:52 PM