ID:

dsi_12994

 Coordinate:

2l:4954633-4954782 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TCCACCATAGTTATTCTTCCATTCTATTTTTCTTTTATCACTATTATTTTCTAACCAATGACTTGTTCTTTTTATTAATCCCTTAACCCCACAAACCCAACACTGCCCTAACCTTTGTTGATTTGCCACTCTGCCCGTAAATGTTGTAAATTGCACTACCCACAAAAAATTGCTATGCCTTGCGCTTTGCTGCCCCAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCAGAGGTGTCAACCGAGATGA
**************************************************.........................................((((..(((((.............))))).)))).................((.(((((.((((.......(((....)))........)))).))))).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M053
female body
 SRR902008
ovaries
.........................................................................................................................................................................................................................TCGGAGCTCAACCAGAGGTGT............ 21 0 1 3.00 3 2 0 0 0 1 0 0
.................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAAC..................... 20 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCGGAGCTCAACCAGAGGTGG............ 21 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CTCCAAAGACTCGGAGCTCAAC..................... 22 0 1 1.00 1 0 0 0 0 0 1 0
.................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACC.................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCAGA................. 24 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCAACCGGTGGT.............. 28 2 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCAACCGGTGG............... 27 2 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................AAGACTCGGAGCTCAACCAGG................. 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................CAAAGACTCGGAGCTCAAC..................... 19 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CTCCAAAGACTCGGAGCTC........................ 19 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TCAACCGGAGGAGTCAACAGAGATGA 26 3 1 1.00 1 0 0 0 0 0 0 1
......................................................................................................................................................................................................AGAAACCGCCTCCAAAGACTCGGAGCTC........................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCA................... 22 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGACTCGGAGCTCAACCAGA................. 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCAACCGG.................. 24 1 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................CTCTGTTGATTTGGGACTCTG..................................................................................................................... 21 3 6 0.17 1 0 0 0 1 0 0 0
...........................................................GAATTGTTCTTTTTA................................................................................................................................................................................ 15 1 20 0.05 1 0 0 0 1 0 0 0
......................................................................................................CTGCGCTAACCTTTTTGGA................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0

Anti-sense strand reads

AGGTGGTATCAATAAGAAGGTAAGATAAAAAGAAAATAGTGATAATAAAAGATTGGTTACTGAACAAGAAAAATAATTAGGGAATTGGGGTGTTTGGGTTGTGACGGGATTGGAAACAACTAAACGGTGAGACGGGCATTTACAACATTTAACGTGATGGGTGTTTTTTAACGATACGGAACGCGAAACGACGGGGTTTCTTTGGCGGAGGTTTCTGAGCCTCGAGTTGGTCTCCACAGTTGGCTCTACT
**************************************************.........................................((((..(((((.............))))).)))).................((.(((((.((((.......(((....)))........)))).))))).)).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M024
male body		 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR553488
RT_0-2 hours eggs
 GSM343915
embryo
...................................................................................................................................................TCTAACGGGATGGGTGTT..................................................................................... 18 2 7 0.57 4 0 2 0 0 2 0 0
..................................................................................AATTGGGGTGTTAGGGTTC..................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0 0
....................................................................................................................................CGGGCATTTAGAACATTCA................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0 0
............................................ATAAAAGATTGGTGACT............................................................................................................................................................................................. 17 1 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................................................................TTAACGGGATGGGTGTT..................................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................TGGGTTGTGACGGGA............................................................................................................................................. 15 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................TAAGGTGATGGGTGTT..................................................................................... 16 1 4 0.25 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................TCGAGGTGGTCTCCA.............. 15 1 11 0.18 2 0 0 0 1 0 1 0
.........................................................................................................................................................................................................TTGGCGGTGGTTTCTG................................. 16 1 6 0.17 1 1 0 0 0 0 0 0
.........................TAAAAAGAAAATAGT.................................................................................................................................................................................................................. 15 0 8 0.13 1 1 0 0 0 0 0 0
.....................................................................................................................................................TAACGGGATGGGTGT...................................................................................... 15 1 8 0.13 1 0 0 0 0 0 1 0
...........................................................................ATCAGCGAATTGGAGTGTTT........................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0 0
..............................................................................AGCGAATTGGGGTGTTG........................................................................................................................................................... 17 2 11 0.09 1 1 0 0 0 0 0 0
......................................................................................................................................................AAGGTGATGGGTGTT..................................................................................... 15 1 17 0.06 1 0 0 0 0 0 1 0
............................................................................TCAGCGAATTGGGGTGTTG........................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0 0 0
..........................TAAAAGAAAATAGTGA................................................................................................................................................................................................................ 16 1 20 0.05 1 1 0 0 0 0 0 0
.....................................AGTGATAACAAAAGA...................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0
.......................................................................................AGGAGTTTGGGGTGTGACG................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:4954583-4954832 + dsi_12994 TCC------------AC--------------------------CA--T------------------AGTTATTCTTCCATTC------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AC-----A----AACCCAACA---CTGCCC-TAACCTTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACA--------A-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CC--CAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCAGAGGTGTCAACCGAGATGA
droSec2 scaffold_5:3227835-3228085 + TCC------------AC--------------------------CA--T------------------AGTTATTCTTCCATTT------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AC-----C----AACCCAACA---CTGCCC-TTACCTTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACC-------AA-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATACC-T-------------TGCGCTTTG-----CTGC----------CA--CAAAGAAACCGCCTGCAAAGACTCGGAGCTCAACCGGAGGTGTCAACAGAGATGA
dm3 chr2L:5141110-5141360 + TTT------------TA--------------------------GA--T------------------AGCTATTCTTCCATTC------TATT--ATTCTTTTATCA----------CTATTATTTGCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------AACCCTTA------ACC-CC-----------------------AC-----A----AACCCAACA---CTGCCC-TAACCCTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACC-------AA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--CAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGGAGGTGTCAGCACAGATGA
droEre2 scaffold_4929:5222171-5222436 + TAC------------ACCTT--TTTTAA---------------AA--T------------------ATTTAGTCTGCCACTC------TATT--TTAATTTTATCT----------CTATTATTTTCTAACCACTGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AA-----A----AACCCAACA---CTGCCC-CAATCTTTGT-TGACTT-GCC----ACACT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCACCAC-AAAAAA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CT--AAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACAGGAATGA
droYak3 2L:10382967-10383231 - TAT------------ACCTT--TCTTTT---------------AA--C------------------ATTTAGTCTTCCATTC------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCATTGAC-TTGTTATTTTT--ATTA--------------------ATCCCCTA------ACC-AC-----------------------AC-----A----AACCCAACA---CTGCCC-CAAACTTTGT-TGATTT-GCC----ACCCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCACGAC--AAAAA-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--TAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCAAAGGTGTCAACAGAGATGA
droEug1 scf7180000409005:1030345-1030597 + TCC---AA-------AT--------------------------GATAG--ATTTA-----------T----TCTGTTAATTG------CA-----TTCTTTTATTATT--------CTTTTACTTTTTAACCAACGTC-TTGTTCTTTTT--AAAA--------------------ATTCCTTA------A------------------------------------------CCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----ACACAA--------------------------------C-------CCCGTAAC----------TGTTG------T------------A-T----AATGC----ACTACCCACC-CATAAAAA-AA--AA-------------------------------------------------------------------------------TCGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------TA--TAAAGAAACCGCCGCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACAAAGATGA
droBia1 scf7180000302261:583349-583597 + TGC------------------------------------------------------------------TAGTCTTCCACTC------TATT--T-TATTTTATTGTT--------TCCTTATTTTCTAACCAACGTC-TTGTTTTTTTT--ATTA--------------------ATCCCTTA------ACCAAC-----------------------AC-----A-A--AACCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----ACACT---------------------------------C-------CCCGTAAAA---------TGTTG------T------------A-A----AACGC----ACTACCCACC-------AA-AACCAT-------------------------------------------------------------------------------TCGC-------------------TATGCC-T-------------TGCGCTATG-----CTGC----------TA--TAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACACAGATGA
droTak1 scf7180000415704:384305-384607 - TTG------------CCTGTGCGCTGT-TTCTGCTGGCCACCA----TTGATTTAAAGCGTAGAAATTCTATTCTTCCATTC------CATT--TTCCTTTTATTATCC------CATATTATTTTCTAACAAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACCACC-----------------------AC-----A-A--AACCCAACA---CTGCCC-TAACTTTTGT-TGATTTTGCT----ACACT---------------------------------T-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCATC-A--AAAAA-CA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-C-------------TGCGCTTTG-----CTGC----------TA--TAAAGAAACCGCCTTCAAAGACTCGGAGCTCAACTGAAGATGTCAACAGAGATGA
droEle1 scf7180000491273:73315-73576 - CTA------------GA--------------------------AA--T------------------GCCTATT-ATCCATTC------TATT--T-TCTTTAATTGTT--------CTATTATTTTCTAACCAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CT-----------------------AC-----A-A--AACCCAACA---CTGCTC-TAACTTTTGT-TGATTT-GCC----GCACTC------------------------------CTC-------CCCGTAAC----------TGTTG------T------------A-A----AATGC----ACAACCCACA-AA-AAAAA-AA--AA--------------------------A----------------------------------------------------CCCT-------------------AATGCC-T-------------TGTGCTTTG-----CTGC---------ATA--TAAAGAAACCACCTCCAAAGACTCAGAGCTCAATCAAAGATGTCAACAAAGATGT
droRho1 scf7180000779577:76313-76555 - T---------------------------------------------------------------------ATTCTTCCATTC------TGTT--TTTCTTTATTTGTT--------CTCTTATTTTCTAACCAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CT-----------------------AC-----C----AACCCAACA---CTGCTC-TAACTTTTGT-TGATTT-GCC----GCACT---------------------------------C-------CCCGTAAC----------TGTTG------T------------A-A----AATGC----ACAACCCAAA-------AA-AA--AC-------------------------------------------------------------------------------ACGC-------------------TATGCC-T-------------CGTGCTTTG-----CTGC---------ATA--TAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCGGAGATGTTAACAAAGGTGA
droFic1 scf7180000453842:1099240-1099507 - TTC------------TT-----TTTTG---------------------------------TAAAAAACATATTTTTCCATTC------CATT--TTTCTTGTATTGAA--------CTATGATTTTCTAACCAATGTT-TTGTTCTTTTT--ATTA--------------------ATCCCTTTATTAATACC-AT-----------------------AC-----A----ACCCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----GCACT-----------------------------------------CCCGTAAC----------TGTTG------T------------A-T----AATTC----ACCATACACT-C--G--AA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--TAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCGAAGGTGTCAACAAAGATGA
droKik1 scf7180000302643:720769-721042 - TTC------------CCT-T--TCTTT-TTC--------------------TTTAAA-------------------------------T--TTTATAAAA-----ACCTCATTTACCTTTGATTTGCTAACCAATG------TTCTTTTTATATTA--------------------AACCCTTA------ACC-ATTCCCCCAC----CAACATACCAACTTCCCCA--CCCCAACAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----GCACT---------------------------------GTTGCCCC--CGTAAC----------TGTTG------T------------A-AAAAAAATGCACACACTACCCACA--------A-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGTGCTT-G-----CCGC----------TGCCTAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCAAAGA---------------
droAna3 scaffold_12916:10020681-10020925 - ATCTCCAAAGAGTTTAC------------------------------------------------------TTTCTCCATTCCCAGCCTCTT--ATTTTAAAATCG-----------TTTGATTTTCTAACCAATGTT-TTGTTCTTTTA--ATTA--------------------AACCCTTA------ACC-CT-----------------------------------TGCCCAA--------CCT-TAACCCCTGT-TGATTT-GCC----GTACA-------------------------------------------CGTAAC----------TGTTG------T------------A-A----AATGC----ACTATCCACA-------AAATA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCA-T----CG-------TGCGC-TTG-----CTGC----------TG--TAAAGAAACCGCCGCCAAAGACTCGGGGCTCAACCGAAGATGTCG-----GGCG-
droBip1 scf7180000396580:1012801-1013031 + TTT------------AC-------------------------------------------------------TTATTCATTCTCAGCCT--TTTATTATG-----AATT------CGTTTGATTTTCTAACCAATGTT-TTGTTCTTTTA--ATTA--------------------AACCCTTA------ACC-CT-----------------------------------TACCCAA--------CCT-TAACCCCCGT-TGATTT-GCC----GAAC-------------------------------------------ACGTAAC----------TGTTG------T------------A------AATGC----ACTATCCACA-------AAATA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCA-T----AC-------TGCGCT-TG-----CTGC----------TG--TTAAGAAACCGCCGTCAAAGGCTCGGGGCTCAACCGAAGATGTCG-----GGCG-
dp5 4_group3:2761628-2761905 - TTT------------AT----------------------------------------------------------------------------------TTGATTTTTC------CATTTGATTTGCTAACCAATGAT-TTGTTTTTCCA--TTTT--------------------AACCCCTA------ACC-ATTCCCAAAA----A-AAACACAAAAC-----A----CACCCAACA---CTGCCC-TAACTTTTGTTTGATTT-GCT----GCACAACCCA--------------CGACCCACAACCCAA-------CCCGTAAC----------TGTTG------T------------ATA----AACGC----ACTACCAAAA-C--AAACA-AA--AA-------------------------------------------------------------------------------ATGCTCGAAAAATGCCTATTGCCTATGCCAT-------------TGCTA-TTG-----CTTC----------GA--AAAAGCAACCGCCGCAAAAGACTCGGAGCTCAACCAACGATATC-----------
droPer2 scaffold_1:4246134-4246318 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----A----CACCCAACA---CTGCCC-TAACGTTTGTTTGATTT-GCT----GCACAACCCA--------------CGACCCACAACCCAA-------CCCGTAAC----------TGTTG------T------------ATA----AACGC----ACTACCAAAA-C--A--AA-AA--CA-------------------------------------------------------------------------------ATGCTCGAAAAATGCCTATTGCCTATGCCAT-------------TGCTA-TTG-----CTTC----------GA--AAAAGCAACCGCCGCAAAAGACTCGGAGCTCAACCGA------------------
droWil2 scf2_1100000004585:1141510-1141821 - CCT------------GC--------------------------CA--A----------------------ATTG-----TTT------GATT--T-TTTTTATTAGAT--------TCCTAATTTGCTAACCAATGATATTTTTCTTTTA--ATTAAAATCCT-------------CTCCCCTA------ACA-CT-C--AACCGTAAT-CCAC-----AC-----CAATATCCACACCA---TTGCTCGTAATGACTGT-TGATTTTACCTTTAACACTCCCCCCGCCTTACTCCACCCCACTCACTACACAC-------CCTGTATT-------TGTTGTTG------T------------A-A----AATGC----ACTACCAATC-------ACATG--AA-------------------------------------------------------------------------------CCGC-------------------TATGGC-TTTGCTGTGCTCTTTACGCTTTGGCCTAAAAC----------AA--AAAAGCAACCGCCAAGAAAAACTCAGAGCTCAACCAA------------------
droVir3 scaffold_12963:6458775-6459003 - dvi_10655 TTT------------AA--------------------------------------------------------------------------T--TTACTTTTATTT----------CTAATACCCTCCAACTAC-----ACCAACT--TT--ATCA-------ACTTTACCAACTGAACCACAA------ACT-AC-----------------------CC-----C----AACCAAACA---CCGCTC-TAACTTTTAT-TGATTT-GCC----GCACC---------------------------------GTAATTAT--TGTTGT----------TGTTATTGTAAT------------A-A----AA-----------CCAAAA-C-----AA-AA--ATATGCACTACCACGCCCAC---------------------------------------------------------------------------------------------------------TTTGC-TTG-----CCAC----------TA--AAAAGCAACCGCCGCCAAATACTCAGAGCTCAACCGA------------------
droMoj3 scaffold_6500:25604155-25604343 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCAAACA---CCGCTC-TAACCTTTGT-TGATTT-GCC----GCACC---------------------------------GTAACTCC--TGTTGT----------TGTTGTTGTTGCATATTAAAAATAA-A----AACCC----ACTACCACGC-C--C---------------------------ACC------------------------------------------------------------TTGCTCGCCGCCTGCCTGTTCGCTT-------------------TGCATTCGCCTCTAAAAACAATACCAAATA--TAAAGAAACCGCCGCCAAAGACTCAGAGCTCAACC--------------------
droGri2 scaffold_15252:9686833-9687116 - TAT------------TT-------------------------------------------------------------ATAT------TAAT--TTACTTT-------------------TATCCTTAACCCAACTAC-TCAAACTACTC--CAAC---------T----------ATACC-AA------ATC-CC-----------------------AC-----C----AA-TAAACACCGCTCCTC-TAACTTATGT-TGATTT-GCC----GCAC-------------------------------------------CTGTAACTTGTTGTTGTTGTTA------T------------A-A----ACCGC----ACTACCACGC-C--C---------------------------ACTTTGAAACGCCCGTCCGCCTCTCGCTCGTCTATCTGTCTGCCTGCCTGCCAATCTGTCGAAATGC-------------------TATGC--T-------------TGAAT-TTG-----ATA-----------TA--AAAAGCAACCGCCGCCAAATACTCAGAGCTCAACCGACGATGACAAC--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TCC------------AC--------------------------CA--T------------------AGTTATTCTTCCATTC------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AC-----A----AACCCAACA---CTGCCC-TAACCTTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACA--------A-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CC--CAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCAGAGGTGTCAACCGAGATGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGCTCAACCAGAGGTGT............2113.00310200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAAC.....................2012.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGCTCAACCAGAGGTGG............2111.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAAAGACTCGGAGCTCAAC.....................2211.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACC....................2111.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCAGA.................2411.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTCGGAGCTCAACCAGG.................2111.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACTCGGAGCTCAAC.....................1911.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAAAGACTCGGAGCTC........................1911.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAACCGCCTCCAAAGACTCGGAGCTC........................2811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCA...................2211.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTCGGAGCTCAACCAGA.................2111.00100100000000000000
droSec2
TCC------------AC--------------------------CA--T------------------AGTTATTCTTCCATTT------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AC-----C----AACCCAACA---CTGCCC-TTACCTTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACC-------AA-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATACC-T-------------TGCGCTTTG-----CTGC----------CA--CAAAGAAACCGCCTGCAAAGACTCGGAGCTCAACCGGAGGTGTCAACAGAGATGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCAAAGACTCGGAGCT.........................2111.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAGCTCAACCGGAGGT..............2011.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGGAGGTGTCAACAGAGATG.2411.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAAAGACTCGGAGCTC........................1911.0010010
dm3
TTT------------TA--------------------------GA--T------------------AGCTATTCTTCCATTC------TATT--ATTCTTTTATCA----------CTATTATTTGCTAACCAATGAC-TTGTTCTTTTT--ATTA--------------------AACCCTTA------ACC-CC-----------------------AC-----A----AACCCAACA---CTGCCC-TAACCCTTGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----ATTGC----ACTACCCACC-------AA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--CAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGGAGGTGTCAGCACAGATGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACTCGGAGCTCAACCGGA.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGAGGTGTCAGCACA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CCCGTAAA----------TGTTG------T------------A-A----ATTGC----............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGT-TGATTT-GCC----ACTCT---------------------------------G-------CCCGTAAA----------....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACTCGGAGCTCAACCGGA.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACCGGAGGTGTCAGCACAGAT..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTCAACCGGAGGTGTC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACTCGGAGCTCAACCGGG.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGAGCTCAACCGGA.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTCGGAGCTCAACCGGAGGT..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCGCCTCCAAAGACT................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAAAGACTCGGAGCTCAACCGGAGGT..............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAGCTCAACCGGAGGTGT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGCTCAACCGGAGGTGT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCTCAACCGGAGGTGTCAGCA.......2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCA.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGAGCTCAACCGGAGGTGTCA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCTCCAAAGACTCGGAGCTCA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGAGGTGTCAGCGA......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGAGCTCAACCGGAGGTGT............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GT-TGATTT-GCC----ACTCT---------------------------------G-------CC....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCAACCGGAGGT..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAAC.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTGC----ACTACCCACC-------AA-AA--AA-------------------------------------------------------------------------------A..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GT-TGATTT-GCC----ACTCT---------------------------------G-------C.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTCGGAGCTCAACC....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CC-CC-----------------------AC-----A----AACCCAACA---CT..................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGTGTCAGCACAGATG.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAGCTCAACCGGAGGTGTCA..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTCAACCGGAGGTACG...........19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droEre2
TAC------------ACCTT--TTTTAA---------------AA--T------------------ATTTAGTCTGCCACTC------TATT--TTAATTTTATCT----------CTATTATTTTCTAACCACTGAC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CC-----------------------AA-----A----AACCCAACA---CTGCCC-CAATCTTTGT-TGACTT-GCC----ACACT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCACCAC-AAAAAA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CT--AAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACAGGAATGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTCAACCGAAGGTGT............2012.0020000020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTCGGAGCTCAACCGAAGGT..............2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGACTCGGAGCTCAACCG...................2311.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCGAAGGT..............2711.0010001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACCGAAGGTGTCAACAGGAAT..2611.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACTCGGAGCTCAACCGAAG................2311.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTCAACCGAAGGTGTCA..........2211.0010000100
droYak3
TAT------------ACCTT--TCTTTT---------------AA--C------------------ATTTAGTCTTCCATTC------TATT--TTTCTTTTATCA----------CTATTATTTTCTAACCATTGAC-TTGTTATTTTT--ATTA--------------------ATCCCCTA------ACC-AC-----------------------AC-----A----AACCCAACA---CTGCCC-CAAACTTTGT-TGATTT-GCC----ACCCT---------------------------------G-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCACGAC--AAAAA-AA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--TAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCAAAGGTGTCAACAGAGATGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAGCTCAACCAAAGGTGTC...........2311.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACTCGGAGCTCAAC.....................1911.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGACTCGGAGCTC........................1811.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGAGCTCAACCAAAGGC..............2711.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACTCGGAGCTCAACCAAAGG...............2411.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGGAGCTCAACCAAAGGTGTCA..........2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCAAAGACTCGGAGCTCAAC.....................2211.00100000010000
droEug1
TCC---AA-------AT--------------------------GATAG--ATTTA-----------T----TCTGTTAATTG------CA-----TTCTTTTATTATT--------CTTTTACTTTTTAACCAACGTC-TTGTTCTTTTT--AAAA--------------------ATTCCTTA------A------------------------------------------CCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----ACACAA--------------------------------C-------CCCGTAAC----------TGTTG------T------------A-T----AATGC----ACTACCCACC-CATAAAAA-AA--AA-------------------------------------------------------------------------------TCGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------TA--TAAAGAAACCGCCGCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACAAAGATGASizeHit CountTotal NormTotal
No Reads
droBia1
TGC------------------------------------------------------------------TAGTCTTCCACTC------TATT--T-TATTTTATTGTT--------TCCTTATTTTCTAACCAACGTC-TTGTTTTTTTT--ATTA--------------------ATCCCTTA------ACCAAC-----------------------AC-----A-A--AACCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----ACACT---------------------------------C-------CCCGTAAAA---------TGTTG------T------------A-A----AACGC----ACTACCCACC-------AA-AACCAT-------------------------------------------------------------------------------TCGC-------------------TATGCC-T-------------TGCGCTATG-----CTGC----------TA--TAAAGAAACCGCCTCCAAAGACTCGGAGCTCAACCGAAGGTGTCAACACAGATGASizeHit CountTotal NormTotal
No Reads
droTak1
TTG------------CCTGTGCGCTGT-TTCTGCTGGCCACCA----TTGATTTAAAGCGTAGAAATTCTATTCTTCCATTC------CATT--TTCCTTTTATTATCC------CATATTATTTTCTAACAAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACCACC-----------------------AC-----A-A--AACCCAACA---CTGCCC-TAACTTTTGT-TGATTTTGCT----ACACT---------------------------------T-------CCCGTAAA----------TGTTG------T------------A-A----AATGC----ACTACCCATC-A--AAAAA-CA--AA-------------------------------------------------------------------------------TTGC-------------------TATGCC-C-------------TGCGCTTTG-----CTGC----------TA--TAAAGAAACCGCCTTCAAAGACTCGGAGCTCAACTGAAGATGTCAACAGAGATGASizeHit CountTotal NormTotal
No Reads
droEle1
CTA------------GA--------------------------AA--T------------------GCCTATT-ATCCATTC------TATT--T-TCTTTAATTGTT--------CTATTATTTTCTAACCAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CT-----------------------AC-----A-A--AACCCAACA---CTGCTC-TAACTTTTGT-TGATTT-GCC----GCACTC------------------------------CTC-------CCCGTAAC----------TGTTG------T------------A-A----AATGC----ACAACCCACA-AA-AAAAA-AA--AA--------------------------A----------------------------------------------------CCCT-------------------AATGCC-T-------------TGTGCTTTG-----CTGC---------ATA--TAAAGAAACCACCTCCAAAGACTCAGAGCTCAATCAAAGATGTCAACAAAGATGTSizeHit CountTotal NormTotal
No Reads
droRho1
T---------------------------------------------------------------------ATTCTTCCATTC------TGTT--TTTCTTTATTTGTT--------CTCTTATTTTCTAACCAACGTC-TTGTTCTTTTT--ATTA--------------------ATCCCTTA------ACC-CT-----------------------AC-----C----AACCCAACA---CTGCTC-TAACTTTTGT-TGATTT-GCC----GCACT---------------------------------C-------CCCGTAAC----------TGTTG------T------------A-A----AATGC----ACAACCCAAA-------AA-AA--AC-------------------------------------------------------------------------------ACGC-------------------TATGCC-T-------------CGTGCTTTG-----CTGC---------ATA--TAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCGGAGATGTTAACAAAGGTGASizeHit CountTotal NormTotal
No Reads
droFic1
TTC------------TT-----TTTTG---------------------------------TAAAAAACATATTTTTCCATTC------CATT--TTTCTTGTATTGAA--------CTATGATTTTCTAACCAATGTT-TTGTTCTTTTT--ATTA--------------------ATCCCTTTATTAATACC-AT-----------------------AC-----A----ACCCCAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----GCACT-----------------------------------------CCCGTAAC----------TGTTG------T------------A-T----AATTC----ACCATACACT-C--G--AA-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGCGCTTTG-----CTGC----------CA--TAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCGAAGGTGTCAACAAAGATGASizeHit CountTotal NormTotal
No Reads
droKik1
TTC------------CCT-T--TCTTT-TTC--------------------TTTAAA-------------------------------T--TTTATAAAA-----ACCTCATTTACCTTTGATTTGCTAACCAATG------TTCTTTTTATATTA--------------------AACCCTTA------ACC-ATTCCCCCAC----CAACATACCAACTTCCCCA--CCCCAACAACA---CTGCCC-TAACTTTTGT-TGATTT-GCC----GCACT---------------------------------GTTGCCCC--CGTAAC----------TGTTG------T------------A-AAAAAAATGCACACACTACCCACA--------A-AA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCC-T-------------TGTGCTT-G-----CCGC----------TGCCTAAAGAAACCGCCTCCAAAGACTCAGAGCTCAACCAAAGA---------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATCTCCAAAGAGTTTAC------------------------------------------------------TTTCTCCATTCCCAGCCTCTT--ATTTTAAAATCG-----------TTTGATTTTCTAACCAATGTT-TTGTTCTTTTA--ATTA--------------------AACCCTTA------ACC-CT-----------------------------------TGCCCAA--------CCT-TAACCCCTGT-TGATTT-GCC----GTACA-------------------------------------------CGTAAC----------TGTTG------T------------A-A----AATGC----ACTATCCACA-------AAATA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCA-T----CG-------TGCGC-TTG-----CTGC----------TG--TAAAGAAACCGCCGCCAAAGACTCGGGGCTCAACCGAAGATGTCG-----GGCG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACTCGGGGCTCAACCG...................2011.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACCGAAGATGTCT-----.....1811.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCAAAGACTCGGGGCTC........................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGACTCGGGGCTCAAC.....................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCTCAACCGAAGATGTCG-----GGC..2511.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAGACTCGGGGCTCAACC....................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAGACTCGGGGCTCAACCG...................2311.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCGCCAAAGACTCGGGGCTCAACC....................2911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAACCGAAGATGTTC-----.....1911.001000010
droBip1
TTT------------AC-------------------------------------------------------TTATTCATTCTCAGCCT--TTTATTATG-----AATT------CGTTTGATTTTCTAACCAATGTT-TTGTTCTTTTA--ATTA--------------------AACCCTTA------ACC-CT-----------------------------------TACCCAA--------CCT-TAACCCCCGT-TGATTT-GCC----GAAC-------------------------------------------ACGTAAC----------TGTTG------T------------A------AATGC----ACTATCCACA-------AAATA--AA-------------------------------------------------------------------------------ATGC-------------------TATGCA-T----AC-------TGCGCT-TG-----CTGC----------TG--TTAAGAAACCGCCGTCAAAGGCTCGGGGCTCAACCGAAGATGTCG-----GGCG-SizeHit CountTotal NormTotal
No Reads
dp5
TTT------------AT----------------------------------------------------------------------------------TTGATTTTTC------CATTTGATTTGCTAACCAATGAT-TTGTTTTTCCA--TTTT--------------------AACCCCTA------ACC-ATTCCCAAAA----A-AAACACAAAAC-----A----CACCCAACA---CTGCCC-TAACTTTTGTTTGATTT-GCT----GCACAACCCA--------------CGACCCACAACCCAA-------CCCGTAAC----------TGTTG------T------------ATA----AACGC----ACTACCAAAA-C--AAACA-AA--AA-------------------------------------------------------------------------------ATGCTCGAAAAATGCCTATTGCCTATGCCAT-------------TGCTA-TTG-----CTTC----------GA--AAAAGCAACCGCCGCAAAAGACTCGGAGCTCAACCAACGATATC-----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGCCGCAAAAGACTCGGA............................2311.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGCTCAACCAACGAT..............1811.0010010000000
droPer2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----A----CACCCAACA---CTGCCC-TAACGTTTGTTTGATTT-GCT----GCACAACCCA--------------CGACCCACAACCCAA-------CCCGTAAC----------TGTTG------T------------ATA----AACGC----ACTACCAAAA-C--A--AA-AA--CA-------------------------------------------------------------------------------ATGCTCGAAAAATGCCTATTGCCTATGCCAT-------------TGCTA-TTG-----CTTC----------GA--AAAAGCAACCGCCGCAAAAGACTCGGAGCTCAACCGA------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CCT------------GC--------------------------CA--A----------------------ATTG-----TTT------GATT--T-TTTTTATTAGAT--------TCCTAATTTGCTAACCAATGATATTTTTCTTTTA--ATTAAAATCCT-------------CTCCCCTA------ACA-CT-C--AACCGTAAT-CCAC-----AC-----CAATATCCACACCA---TTGCTCGTAATGACTGT-TGATTTTACCTTTAACACTCCCCCCGCCTTACTCCACCCCACTCACTACACAC-------CCTGTATT-------TGTTGTTG------T------------A-A----AATGC----ACTACCAATC-------ACATG--AA-------------------------------------------------------------------------------CCGC-------------------TATGGC-TTTGCTGTGCTCTTTACGCTTTGGCCTAAAAC----------AA--AAAAGCAACCGCCAAGAAAAACTCAGAGCTCAACCAA------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAAACTCAGAGCTC........................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTCAGAGCTCAACC....................1811.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAACTCAGAGCTCAACC....................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCAAGAAAAACTCAGAGCTCAAC.....................2811.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCTAAAAC----------AA--AAAAG..................................................1911.00100001
droVir3
TTT------------AA--------------------------------------------------------------------------T--TTACTTTTATTT----------CTAATACCCTCCAACTAC-----ACCAACT--TT--ATCA-------ACTTTACCAACTGAACCACAA------ACT-AC-----------------------CC-----C----AACCAAACA---CCGCTC-TAACTTTTAT-TGATTT-GCC----GCACC---------------------------------GTAATTAT--TGTTGT----------TGTTATTGTAAT------------A-A----AA-----------CCAAAA-C-----AA-AA--ATATGCACTACCACGCCCAC---------------------------------------------------------------------------------------------------------TTTGC-TTG-----CCAC----------TA--AAAAGCAACCGCCGCCAAATACTCAGAGCTCAACCGA------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACTCAGAGCTCAACC....................1811.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCAAATACTCAGAGCT.........................1911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCAAACA---CCGCTC-TAACCTTTGT-TGATTT-GCC----GCACC---------------------------------GTAACTCC--TGTTGT----------TGTTGTTGTTGCATATTAAAAATAA-A----AACCC----ACTACCACGC-C--C---------------------------ACC------------------------------------------------------------TTGCTCGCCGCCTGCCTGTTCGCTT-------------------TGCATTCGCCTCTAAAAACAATACCAAATA--TAAAGAAACCGCCGCCAAAGACTCAGAGCTCAACC--------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TAT------------TT-------------------------------------------------------------ATAT------TAAT--TTACTTT-------------------TATCCTTAACCCAACTAC-TCAAACTACTC--CAAC---------T----------ATACC-AA------ATC-CC-----------------------AC-----C----AA-TAAACACCGCTCCTC-TAACTTATGT-TGATTT-GCC----GCAC-------------------------------------------CTGTAACTTGTTGTTGTTGTTA------T------------A-A----ACCGC----ACTACCACGC-C--C---------------------------ACTTTGAAACGCCCGTCCGCCTCTCGCTCGTCTATCTGTCTGCCTGCCTGCCAATCTGTCGAAATGC-------------------TATGC--T-------------TGAAT-TTG-----ATA-----------TA--AAAAGCAACCGCCGCCAAATACTCAGAGCTCAACCGACGATGACAAC--------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGCTCAACCGACGATG.............1911.00101

Generated: 05/19/2015 at 04:56 AM