ID:dsi_12986 |
Coordinate:3l:16392442-16392516 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
ACAACATACTGCTAGCCGTGGCCGAGAAGCATCTCGGTGGCGTGCCCGAGGTAAAACAATAACAAAGAGCGCAACTTCTTTGTTTCAATTTTGTGTAATCATGTTGTTTGTGTTTTATATCACAGCTCCTTGGCACTTTGGCCAGTTTTCTGCGCCGCAAGACCGACTTCTTCAC
**************************************************((((((((..(((((.((((((((................))))))..))...)))))..)))))))).......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
M053 female body |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ................CGCGACCGTGAAGCATCTCGG.......................................................................................................................................... | 21 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 | 0 |
| ......TACTGCTAGCCGTGGCCGAGAAGCA................................................................................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ................CCCGGCCGTGAAGCATCTCGGT......................................................................................................................................... | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .................................................................................................................................................TTTTCTGCGCCGCAAGACCGACTTCT.... | 26 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .................GCGGCCGTGAAGCATCTCGGT......................................................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................CGAGCTCCTTGGCACTTTGGCCAGT............................. | 25 | 2 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........................AGCATCTCGGTGGCGTGCCCGAGC............................................................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..AACATACTGCTAGCCGTGGCCGAGA.................................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................TGGCCGAGAAGCATCTCGGTGGCGT.................................................................................................................................... | 25 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| .....................CCGTGAAGCATCTCGGTCGGG..................................................................................................................................... | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .......................GAGAAGCGTCTCGGTCG....................................................................................................................................... | 17 | 2 | 3 | 0.33 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................................ATGTAGTTTGTGTTT............................................................ | 15 | 1 | 20 | 0.10 | 2 | 0 | 2 | 0 | 0 | 0 | 0 |
| ............TAACCGCGGCCGTGAAGCA................................................................................................................................................ | 19 | 3 | 19 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
| .........................GAAGCATCTCGGTCGG...................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ...........CTAACCTTGGCCGAGA.................................................................................................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
TGTTGTATGACGATCGGCACCGGCTCTTCGTAGAGCCACCGCACGGGCTCCATTTTGTTATTGTTTCTCGCGTTGAAGAAACAAAGTTAAAACACATTAGTACAACAAACACAAAATATAGTGTCGAGGAACCGTGAAACCGGTCAAAAGACGCGGCGTTCTGGCTGAAGAAGTG
**************************************************((((((((..(((((.((((((((................))))))..))...)))))..)))))))).......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR902009 testis |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| .....................................ACCGCGCGGGCTCCA........................................................................................................................... | 15 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ....................................................................................................................................................AGAAGCGGCGTTCTGG........... | 16 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............AATTGCACCGGCTCTTCGTAGA............................................................................................................................................. | 22 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 |
| ..............................................................................................................ACAACATATCATGTCGAGGA............................................. | 20 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 |
| ...............................................................................AAAGAAGTTAGAACACATTAG........................................................................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 1 |
| .............................................................................GAAAGAAAGTTAAAACTGATT............................................................................. | 21 | 3 | 12 | 0.08 | 1 | 0 | 0 | 1 |
Generated: 04/24/2015 at 04:38 AM