ID:

dsi_12963

 Coordinate:

x:11936460-11936609 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -12.2 -12.0 -12.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAGAGGAGTCAAGTGGAGAGCAGACGGCAGGCAGGCTTGACAACATCTAGGTATAGTTTTTTGTCCAATGAAAATTATTTAGACAATTTAAAAAAGTGCAAATAAACAATTGTGGATGCAGGAGAATGCAGACTAGCTTAAAACTAAAACTTAAAACTTTAAATGGATTGTAAATTTGGCACGTCCGAAAAAAGACTTTTTAAAGCGTGATTTAAAACATTTTCTTAGTAATTTAACGCAAATCATTTGT
****************************************************************************************..........................(((((.(((...(((((.(((..(((((...............))))).))).)))))..))).)))..))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR902008
ovaries
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR902009
testis
 GSM343915
embryo
..............................................................................................................................................................TTAAATGGATTGTAAATTTGGCACGTC................................................................. 27 0 1 4.00 4 3 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TAAATGGATTGTAAATTTGGCACGTC................................................................. 26 0 1 3.00 3 2 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGA.............................................................. 25 0 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................ATGGATTGTAAATTTGGCAC.................................................................... 20 0 1 3.00 3 0 1 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGAAA............................................................ 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTTTAAATGGATTGTAAATTTGGCAC.................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAAAACTTTAAATGGATTGTAAATTT......................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
........................................................................................TAAAAAAGTGCAAATAAACAATTGTGGA...................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................ACTTTAAATGGATTGTAAATTTGGCAC.................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGCAGGAGAATGCAGACTAGCTTAAAA........................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................AAAACTTTAAATGGATTGTAAATTTGG....................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGCAGTAGAATGCAGACTAGCTT............................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................AACTTTAAATGGATTGTAAATTTGGCAC.................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...............GAGAGCAGACGTCATGCAGGC...................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................TAAAACTTAAAACTTTAAATGGATTGTAAA............................................................................ 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAATGGATTGTAAATTTGGCAC.................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................TGCAGGAGAATGCAGACTAGCTTAA............................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................TTTTGTCCAATGAAAATTATTTAGA....................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CTAAAACTTAAAACTTTAAATGGATT................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................TAAAACTTAAAACTTTAAATGGATT................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CTTTAAATGGATTGTAAATCTGGCAC.................................................................... 26 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................TGTAAATTTGGCACGTCCGAAAAAAGACT..................................................... 29 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..............................GCAGGCTTGACAACATCTATGTA..................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................TGCAAATAAACAATTGTGGATGCAGG................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................TAAAACTTAAAACTTTAAATGGATTGTA.............................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................TTTAAATGGATTGTAAATTTGGCACGTC................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGTGGATGCAGGAGAATGCAGAC..................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................TGCATTGTAAATTTGGCACGTCCGAAATA.......................................................... 29 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
............................................................................................................................................................CTTTAAATGGATTGTAAATTTGGC...................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................TGTGGATGCAGGAGAATGCAGACTAGC................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................ATTGTGGATGCAGGAGAATGCAGACT.................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................TTTAAAAAAGTGCAAATAAACAATTGTGGA...................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................GAAATGGATTGTAAATTTG........................................................................ 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
............................................................................................AAAGTGCAAATAAACAATTGTGGATGC................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................AAAACTTTAAATGGATTGTAAATT.......................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................ACATTTTCTTAGTAATTTAACGCAAATC...... 28 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................ACTTTTTAAAGCGTGATT...................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................TGCAGGAGAATGCAGACTAGCA................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................ATGGATTGTAAATTTGGCACGTCCGA.............................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGAAAA........................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TTTAAATGGATTGTAAATTTGGCACGT.................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTAAAGCGTGATTTAAAACATTTTCT......................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................TTAAAACTTTAAATGGATTGTAAATTTGG....................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................AAATGGATTGTAAATTTGGCACGG.................................................................. 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................GGATTGTAAATTTGGCACGTCC................................................................ 22 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0
.........CAAGTGGAGAGCAGACGGCAGGCAC........................................................................................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.................................................GGTATAGTTTGTCGTCCAA...................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0
........................CGGCAGGCAGGGTTGAGGACATC........................................................................................................................................................................................................... 23 3 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0
..GAGGACTCAAGTGGA......................................................................................................................................................................................................................................... 15 1 17 0.12 2 0 0 0 0 0 0 2 0 0 0 0 0
.........................................................................................................................................................AAACTTTAAATGGGT.................................................................................. 15 1 20 0.10 2 0 0 0 0 0 0 2 0 0 0 0 0
..........................GCAGGCCGGCTAGACAA............................................................................................................................................................................................................... 17 2 11 0.09 1 0 0 0 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................TTTTAAAGTGTGATTTACA.................................. 19 2 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................................................................................................................TCAAACTTTAAATGGA................................................................................... 16 1 16 0.06 1 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................TTGGACACTTTAAAAAACTG........................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0
..........................................................TGTTGTCCAATGAAA................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

CTCTCCTCAGTTCACCTCTCGTCTGCCGTCCGTCCGAACTGTTGTAGATCCATATCAAAAAACAGGTTACTTTTAATAAATCTGTTAAATTTTTTCACGTTTATTTGTTAACACCTACGTCCTCTTACGTCTGATCGAATTTTGATTTTGAATTTTGAAATTTACCTAACATTTAAACCGTGCAGGCTTTTTTCTGAAAAATTTCGCACTAAATTTTGTAAAAGAATCATTAAATTGCGTTTAGTAAACA
*****************************************************************..........................(((((.(((...(((((.(((..(((((...............))))).))).)))))..))).)))..))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
...................................................................................................................................TGATCGAATTTTGATTTTGAA.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................TTTGAAATTTACCAAATATTT............................................................................ 21 2 5 0.20 1 0 1 0 0 0
.........................................................................................................................................................TTTGAAATTTACCAAATATT............................................................................. 20 2 9 0.11 1 0 1 0 0 0
.................................................................................................................................................................................CCGAGCAGGCTTTTT.......................................................... 15 1 12 0.08 1 0 0 0 1 0
..................................CGAACCGTTGTAGAT......................................................................................................................................................................................................... 15 1 12 0.08 1 0 0 1 0 0
............................................................................................TTTCTCGTTTATTTGGTACCA......................................................................................................................................... 21 3 16 0.06 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:11936410-11936659 - dsi_12963 GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAG--GCAG-------------------------------GCTTGAC--AACAT-CTAGGTAT-A----GTTTTT-----------TGTCCAATGAAAA--------------------------TTAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAA-TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAAAACTAA---------------------------AACTTAAAACTT---------------TAAATGGATTGTAAATTTGGCACGTCCGAAAAAA----------------GACTTTT--------------TAAAGCGTGATTTAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGT
droSec2 scaffold_21:334753-334999 - GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAG--GCAG-------------------------------GCTTGAC--AACAT-CTAGGTAT-A----GTTTTT-----------TGTCCAATGAAAA--------------------------TTAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAA-TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAAAACTAA---------------------------AACTTT-------AAT-----------TAAATGGATTGTAAATTTGGCACGTCCGAAAAAA----------------GACTTTT--------------TAAAGCGTGATTTAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGT
dm3 chrX:12580418-12580667 - GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GCAG-------------------------------ACTTGAC--AACATTTTAGGTAT-A----GTT-TT-----------TGTCCAATGAAAA--------------------------TGAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAAATTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCATAAAACT---------------------------------TAAAACTTTAAC-----------TATATGGATTGTAAATTTGGCACGTCCAAAAAAA----------------GACTTTT--------------TAAAGCGTGATTCAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGT
droEre2 scaffold_4690:14278769-14278996 + GAGAGGAGGC--------------A-AG-------------------------TGGAG-------GGCAG--ACAG-------------------------------ACTGGAC--AACAT-TCATATAT-A----GT--TG-----------TGTCCCATGCAAA--------------------------TAAT---TTAGGCAATTT-------AAA----AGTGCAAATAAACAA-CTGTGTCGC----------TGCAG-------------------------------------------------------------------------------------------------------ACTTGTTGCAAACTAA---------------------------TATTT--------AAC-----------AAAATGGATTGTAAATTT-GCGCATCCTG--AGA----------------GACTTTT--------------TAAAACGTGATTCAAAAA--TTTCAA-------------------------------TT--------------TG-------------------AAAGTAATCTAA-------------AGCAGATCA---TTTGT
droYak3 X:6857084-6857346 - GAGAGGAGGC--------------AAAG-------------------------TGGGGAGCAGACGGCTA--GCAG-------------------------------ACTTGAC--AACTT-CTAGATATTA----GT--TT-----------TGTCCAATGAGAA--------------------------TTATTTTTTAGACAATTTCCATTTCCAAAA--AGTGCAAATAAACGA-ATGTGT--GTGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTTGTTTAAAACTGA---------------------------AACCTAA-ACCCAAAC-----------TAAAACGATTGTAAATTTGGCGCATTCAAAAAAA----------------GACTTTT--------------TAAAGCGTGATTCAAAACATTT---------------------------------------------------TG-------------------AAAGTAATTTAA-------------AGCAGATCA---TTTGT
droEug1 scf7180000409110:970065-970340 - AAGAGA---CAG--------------AG-----------------------TG--------GGATGGCAG--GTAG-------------------------------ACTTGAC--A---T-CTAGCTAA-A----AT--TATGATTTCGATATTTTTAACGTAA-C-------------------------TTCT---TCAGG--------------------------------------------TTGCTTTCAAAATCAG--ACTTATTTT-----TG---------------------------AATTGTAAAAAAAAATCAACAAAAAATTGTAAACTTTAAAAATGCTAA----------ACAACCAGAAAACTAA-----------TAATTTTTGTAATTAATATTT--------ACCAAAAACTGCAATACATTAATTATAATTTCATTTTGGCTTAAAA------------------TCC------------------TGTGGCAATCTTTGCAATATTT---------------------------------------------------TC-------------------ATTATAATTT--------------------------------
droBia1 scf7180000298389:156134-156312 - GAGGGGCGAC--------------AGAG-----------------------TG--------GGACGGCAC--ACGT-----------------------------AGACTTGAC--AATAT-CTAGTTGC-A----GT--TT-----------TGTCCAACCACAGA-------------------------TTAT---TCAGACACTTT-------CAAGG--CCTACAACTAGGCAA-----------GCAGAATATAGCACACACATATTTG-----CA---------------------------AATTGTACAA----------------------------------------------------------------------------------------------------------------------------------------------------AAAA----------------GATT--------------------------------------------------------------------TGATT----------------------------------------TTTGATTTTA-------------GCCCTTAGC---TTTAA
droTak1 scf7180000413903:117569-117781 + GAGAGAAGCT--------------G-AG-------------------------AGG-----AGACAGAGA--GGGA-------------------------------------------------GTTCA-A----GT--TT-----------TGTCCAAA---------------------------------AT---TTAGACATTTT-------CCAAA-CAGTTTAAGCAAACTA-TTGTGA--CTGCAGGCGAGGGCAG--ACCCATTTA-----AA---------------------------AATTGTAAA-------------TCTATACATC----------------------------------------------TATACCACATTTAATT-------------------------------------------------------------------------------------------------------------------------------TTAACTTAGACTTTTTAACAAATGAAAAATGATT-TT--------------TC-------------------GAGGTGATTTTA-------------AACAGAGAT---TTTGG
droEle1 scf7180000491023:264261-264543 - GAGAGA---GAGAGAGGAGATGGTAAAG-----------------------TG--------AGATGACAG--GCAG-----------------------------AGACTTGACGAAACAT-CTAGTTAA-A----GT--TG-----------TGTTCAATAAGAG--------------------------CTAT---TTAGACTTTTT-------CAAAA-CACTTTAAATCAACTA-TTGTGT--CTGG---TGATTG-------------------------------------------------------------------------------------------------------------------GATGTGCTTCCCATTTCAAACCATGTC------------AAAACACTACA-----------TTTATAGA-AGCAAATTTGGAA-ATGTAAATAAT----------------GAATAAC--------------GAAAGCG---------------------------------------------------AAAGTTCTGTTCATTCAAGATTGATAGATTGAAGCTATAGAGTATCAA-------------TCCAATCCGCTGTTTCC
droRho1 scf7180000779985:94451-94698 + GAGGAG--AT--------------AATG-----------------------TG--------AGACGGCAG--GCAG-------------------------------ACTTGAC--AACAA-CTAGTTAC-AGACAGT--TG-----------TGTTCAATAAGAG--------------------------CTTT---TAATACATTTT-------CAAAAACAGTGCAATTAAACTG-ATGTGT--CTGCAAGCGATAGCAG-------------------------------------------------------------------------------------------------------ATTTATTTAGAAATGTTTCC--TTTTAAACTATGTC------------AAAGA-----------------------------------------------AATTATTATAAAAAAGAATT-------------------------------------------TGGAATTGTAAATA-------AT------GTAAGCGAAAGCT--GAAT---AA-------------------TAAGATAATTAA-------------CTCATTTCA---CTTTG
droFic1 scf7180000454050:481095-481425 - GCAGGAAATC--------------G-AGAGAGATAACGAGATG--------TG--------AGACGGCAG--GCAG-------------------------------GAT------------------------------TA-----------TGTCCAGAACAAAAACAAATTAAAAACAAAACGAAATGTGTAT---TTAGACATTTT-------CAAAA-CTGTTCAAATAAACTA-TTGTGT--CAGCAAGTTAAAACATATATATATATATTTAACAAGTTTTTAAACAAATTTATTGATTTATACTCTTCGA-------------ACAATTGTGA---------CTGCAAGAAAAAAGGAGAGA---TT------------TAGTTAGCATTTTTTT--------------------TAA-----------TAAATTGATTGTAATATTTAGAAATCCAC--AAA----------------GACTTTT--------------TCAAATCTTTT--------------------------------------------------------------TC-----------------------------AAAGCAAACATTTAAAACGGAGAA---TTTTG
droKik1 scf7180000302610:496739-496835 + TTTATA---TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TTATAAAATTT-------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGAAAATAAAAAATATAAAAATTAACT-------------------------------------------TTAAATTGTATTTG-------CT------T---------------------CG-------------------ATTTAAATTTAA-------------GAAAATGTA---TTCGA
droAna3 scaffold_13117:4175571-4175610 - TTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTT---------------------------------------------------TT-------------------TTAAAATTTTAA-------------CGAAATTTT---TTTAT
droBip1 scf7180000395895:56925-57189 + AAAGAAACCA--------------G-AAACA--CAAGAAAGTGTAAGAGAAGG--------AGACAGCGTAAGCGAGAAAGGGAGAGGTGGCAACTAAATTTTAAAAAATTAGCAAAATAT-TCATTCAT-A----AT--TA-----------TAC-AT---------------------------------ATAT---TTGGACTTTTT-------TATAC--TTTATATCCAGCCTA-TTTTAA-----------------------------------------------------------------TTTTAAC-------------TCAATTGTAC----------------------------------------------AATTTCACATTTTATT--------------------TAG-----------TCAATTAATTTTT-------TT----TAAACAAT----------------AAATATA--------------TTAAATT---------------------------------------------------TATGTTATACTTTTTTT------------------------AAATTAA--------------AAAATTCA---ATTAT
dp5 XR_group6:3098458-3098541 + GAAAAC---GAA--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACCAAAACTAA---------------------------AACATAAAACTT---------------------------------------------------------------------TTGTACATTTTTAGGCATAAAACAAAA-------------------------------------------------------------------------------------------TTTAA-------------AGCATACAC---TTAAT
droPer2 scaffold_9:1394243-1394326 + GAAAAC---GAA--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACCAAAACTAA---------------------------AACATAAAACTT---------------------------------------------------------------------TTGTACATTTTTAGGCATAAAACAAAA-------------------------------------------------------------------------------------------TTTAA-------------AGCATACAC---TTAAT
droVir3 scaffold_13049:20024974-20025015 + CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----------------AATTTTA--------------GAAAATGTGATTTAAAAACTGT---------------------------------------------------TC-------------------TTA---------------------------------------
droMoj3 scaffold_6680:880499-880577 + AGGTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGAAAAATTGACAAAGCCTAAAAAA----------------GATTTTT--------------TAAATTATTACTAAAAAA--TT---------------------------------------------------TG-------------------TTAGTA----------------------AAAACA---ATTTT
droGri2 scaffold_14753:856-962 + GAGAGA---GAG--------------AG-----------------------AG--------AGACAGCGA--GTGA-------------------------------GTAAGAT--AGCG-----AGTAC-A----ATCTTA-----------TGC------CAA-C-------------------------TTTG---TCTAA--------------------------------------------TCGAAATCGAAAACAA--ACCGCTTTA-----CA---------------------------AGTCGCAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAG--GCAG-------------------------------GCTTGAC--AACAT-CTAGGTAT-A----GTTTTT-----------TGTCCAATGAAAA--------------------------TTAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAA-TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAAAACTAA---------------------------AACTTAAAACTT---------------TAAATGGATTGTAAATTTGGCACGTCCGAAAAAA----------------GACTTTT--------------TAAAGCGTGATTTAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------TAAATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2714.00400100003000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2613.00300000002100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGA..................................................................................................................................................................................2513.00300000000000030000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2013.00301200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGAAA................................................................................................................................................................................2712.00200000000000020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTT---------------TAAATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2611.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACTT---------------TAAATGGATTGTAAATTT.............................................................................................................................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................T-------AAAAA--AGTGCAAATAAACAA-TTGTGG--A...........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ACTT---------------TAAATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2711.00101000000000000000
.........................................................................................................................................................................................................................................................TGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAAAA.........................................................................................................................................................................................................................................................................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTT---------------TAAATGGATTGTAAATTTGG...........................................................................................................................................................................................2711.00100000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AACTT---------------TAAATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2811.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAA---------------------------AACTTAAAACTT---------------TAAATGGATTGTAAA................................................................................................................................................................................................3011.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................TGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAA...........................................................................................................................................................................................................................................................................2511.00100000000010000000
...........................................................................................................................................TTT-----------TGTCCAATGAAAA--------------------------TTAT---TTAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CTAA---------------------------AACTTAAAACTT---------------TAAATGGATT.....................................................................................................................................................................................................2611.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAA---------------------------AACTTAAAACTT---------------TAAATGGATT.....................................................................................................................................................................................................2511.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAATTTGGCACGTCCGAAAAAA----------------GACT.........................................................................................................................................................2911.00100000000010000000
..................................................................................................................................................................................................................................TGCAAATAAACAA-TTGTGG--ATGCAGG.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................TAA---------------------------AACTTAAAACTT---------------TAAATGGATTGTA..................................................................................................................................................................................................2811.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------TAAATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2811.00100000001000000000
................................................................................................................................................................................................................................................TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------AC...................................................................................................................................................................................................................................................................................2411.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTT---------------TAAATGGATTGTAAATTTGGC..........................................................................................................................................................................................2411.00100000001000000000
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGC...............................................................................................................................................................................................................................................................................2711.00100000000100000000
..............................................................................................................................................................................................................................................A-TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACT..................................................................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................TTT-------AAAAA--AGTGCAAATAAACAA-TTGTGG--A...........................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
............................................................................................................................................................................................................................AA--AGTGCAAATAAACAA-TTGTGG--ATGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAAACTT---------------TAAATGGATTGTAAATT..............................................................................................................................................................................................2411.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATC.........2811.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTT--------------TAAAGCGTGATT............................................................................................................................1811.00100010000000000000
.........................................................................................................................................................................................................................................................TGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCA..............................................................................................................................................................................................................................................................................2211.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGATTGTAAATTTGGCACGTCCGA..................................................................................................................................................................................2611.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCGAAAA...............................................................................................................................................................................2811.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TT---------------TAAATGGATTGTAAATTTGGCACGT......................................................................................................................................................................................2711.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------TAAAGCGTGATTTAAAACATTT---------------------------------------------------TC-------------------T.........................................2611.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAACTT---------------TAAATGGATTGTAAATTTGG...........................................................................................................................................................................................2911.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGATTGTAAATTTGGCACGG......................................................................................................................................................................................2411.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGTAAATTTGGCACGTCC....................................................................................................................................................................................2211.00100000000000001000
.........C--------------A-AG-------------------------TGGAGAGCAGACGGCAG--GCAC-------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
droSec2
GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAG--GCAG-------------------------------GCTTGAC--AACAT-CTAGGTAT-A----GTTTTT-----------TGTCCAATGAAAA--------------------------TTAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAA-TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCTTAAAACTAA---------------------------AACTTT-------AAT-----------TAAATGGATTGTAAATTTGGCACGTCCGAAAAAA----------------GACTTTT--------------TAAAGCGTGATTTAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................AACAA-TTGTGG--ATGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------AC...................................................................................................................................................................................................................................................................................2311.0010010
.......GTC--------------A-AG-------------------------TGGAGAGCAGACGGCAG--G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
........................................................................................................................................................................................................................................TAAACAA-TTGTGG--ATGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................................................................................................................ACAT-CTAGGTAT-A----GTTTTT-----------TGTCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA----------------GACTTTT--------------TAAAGCGT................................................................................................................................1811.0010010
..........................................................................................................................................................................................................................................................GCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGC...............................................................................................................................................................................................................................................................................2011.0010010
........................A-AG-------------------------TGGAGAGCAGACGGCAG--GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGC...............................................................................................................................................................................................................................................................................2711.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA----------------GACTTTT--------------TAAAGCGTGA..............................................................................................................................2211.0010010
dm3
GAGAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GCAG-------------------------------ACTTGAC--AACATTTTAGGTAT-A----GTT-TT-----------TGTCCAATGAAAA--------------------------TGAT---TTAGACAATTT-------AAAAA--AGTGCAAATAAACAAATTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCATAAAACT---------------------------------TAAAACTTTAAC-----------TATATGGATTGTAAATTTGGCACGTCCAAAAAAA----------------GACTTTT--------------TAAAGCGTGATTCAAAACATTT---------------------------------------------------TC-------------------TTAGTAATTTAA-------------CGCAAATCA---TTTGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................CGGCAAT-GCAG-------------------------------ACTTGAC--AAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006120000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA----------------GACTTTT--------------TAAAGCGT................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
................................................................CGGCAAT-GCAG-------------------------------ACTTGAC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACGGCAAT-GCAG-------------------------------ACTTGAC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000
.............................................................................................................................................................................................................................................AAATTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCAG-------------------------------------------------------------------------------------------------------ACTAGCATAAAACT---------------------------------TAAAACTT..............................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000100000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGTGG--ATGCAGGAGAATGCA.............................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110200000000000000000000000000000000000000000000000000000000
...............................................................ACGGCAAT-GCAG-------------------------------ACTTGAC--AAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATG...............................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..GAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC-----------TATATGGATTGTAAAT...............................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTC--------------A-AG-------------------------TGGAGAGCAGACGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................AATTT-------AAAAA--AGTGCAAATAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................AATTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100
..GAGGAGTC--------------A-AG-------------------------TGGAGAGCAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
..............................................................................................................................................................................................................................................AATTGTGG--ATGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--------------TAAAGCGTGATTCAAAACATT...................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000200000
...............................................................................................................................................................................................................................................ATTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------AC...................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTGGCACGTCCAAAAAAA----------------GA...........................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GACGGCAAT-GCAG-------------------------------ACTTGAC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................AATTGTGG--ATGCAGGAGAATGCA.............................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................TAAACAAATTGTGG--ATGCAGGAGAATG...............................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................TAAACAAATTGTGG--ATGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGCAT.............................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AATAAACAAATTGTGG--ATGCA.......................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTT--------------TAAAGCGTGATTCAAAACATT...................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................AGCAGACGGCAAT-GCAG-------------------------------ACTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATTGTAAATTTGGCACGTCCAAAA................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGCAAATAAACAAATTGTGG--ATGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------T....................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--------------TAAAGCGTGATTCAAAACAT....................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TGTGG--ATGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------GACTTTT--------------TAAAGCGTGATT............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........TC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTT--------------TAAAGCGTGATTCAAAACATT...................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........TC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------TAAAGCGTGATTCAAAACAT....................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
..........................................................................................................................................................................................................................................AACAAATTGTGG--ATGCAGG.....................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000
................................................................................................................................................................................................TGAT---TTAGACAATTT-------AAAAA--AGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................AACAAATTGTGG--ATGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
...............................................................................................................................................................................................................................................ATTGTGG--ATGCAGGAGAATGC..............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------TATATGGATTGTAAATTTGGCACGTC.....................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................GAGCAGACGGCAAT-GCAG-------------------------------ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000
........................A-AG-------------------------TGGAGAGCAGACGGCAAT-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.......GTC--------------A-AG-------------------------TGGAGAGCAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................CAG-------------------------------ACTTGAC--AACATTTTAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA----------------GACTTTT--------------TAAAGCGTGAT.............................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAAA----------------GACTTTT--------------TAAAGCGTGATT............................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGGAGTC--------------A-AG-------------------------TGGAGAGCAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAAAAA----------------GACTTTT--------------TAAAGCGTGA..............................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........TC--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GCAG-------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGATTGTAAATTTGGCACGTCCAAA.................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ACGGCAAT-GCAG-------------------------------ACTTGAC--AACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA----------------GACTTTT--------------TAAAGCGT................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TGGAGAGCAGACGGCAAT-GCAG-------------------------------ACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................AGCAGACGGCAAT-GCAG-------------------------------ACTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTAAC-----------TATATGGATTGTAAAT...............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAC-----------TATATGGATTGTAAATTTGGCA.........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AAACAAATTGTGG--ATGCAGGAGAA.................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CAAATTGTGG--ATGCAGGAGAATGC..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................TAAACAAATTGTGG--ATGCAGGAGAA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTAGC...............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------TATATGGATTGTAAATTTGGCAC........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGATTGTAAATTTGGCACGTCCAAA.................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACGTCCAAAAAAA----------------GACTT........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................T---TTAGACAATTT-------AAAAA--AGTGCAAATAAA........................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TAAACAAATTGTGG--ATGCAGGAGAATGCA.............................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................A-AG-------------------------TGGAGAGCAGACGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.........C--------------A-AG-------------------------TGGAGAGCAGACGGCAAT-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTAGACAATTT-------AAAAA--AGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................GAGCAGACGGCAAT-GCAG-------------------------------ACTTGAC--AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................TTAGACAATTT-------AAAAA--AGTGCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--------------TAAAGCGTGATTCAAA........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------TATATGGATTGTAAAT...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GAAAA--------------------------TGAT---TTAGACAATTT-------AAAAA--AG..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAGTC--------------A-AG-------------------------TGGAGAGCAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCAG-------------------------------------------------------------------------------------------------------ACTAGCATAAAACT---------------------------------TAAAA.................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CAG-------------------------------ACTTGAC--AACATTTTAGGTAT-A----GTT-T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ACTAGCATAAAACT---------------------------------TAAAAC................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TTGTGG--ATGCAGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAGAGGAGGC--------------A-AG-------------------------TGGAG-------GGCAG--ACAG-------------------------------ACTGGAC--AACAT-TCATATAT-A----GT--TG-----------TGTCCCATGCAAA--------------------------TAAT---TTAGGCAATTT-------AAA----AGTGCAAATAAACAA-CTGTGTCGC----------TGCAG-------------------------------------------------------------------------------------------------------ACTTGTTGCAAACTAA---------------------------TATTT--------AAC-----------AAAATGGATTGTAAATTT-GCGCATCCTG--AGA----------------GACTTTT--------------TAAAACGTGATTCAAAAA--TTTCAA-------------------------------TT--------------TG-------------------AAAGTAATCTAA-------------AGCAGATCA---TTTGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................AAATAAACAA-CTGTGTCGC----------TGCA.............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTG--AGA----------------GACTTTT--------------TAAAACGTGA..............................................................................................................................2611.0010000100
.......................................................................................................................................................................................................................................ATAAACAA-CTGTGTCGC----------TGC..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTGTAAATTT-GCGCATCCTG--AGA----------------GA...........................................................................................................................................................2811.0010000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTAA-------------AGCAGATCA---TTTGT2111.0010000100
..............................................................................................................GGAC--AACAT-TCATATAT-A----GT--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-GCGCATCCTG--AGA----------------GACT.........................................................................................................................................................2111.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTAAATTT-GCGCATCCTG--AGA----------------GAC..........................................................................................................................................................2611.0011000000
......................................................................................................................................................................................................................................AATAAACAA-CTGTGTCGC----------TGCA.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGATTGTAAATTT-GCGC........................................................................................................................................................................................2011.0010000010
droYak3
GAGAGGAGGC--------------AAAG-------------------------TGGGGAGCAGACGGCTA--GCAG-------------------------------ACTTGAC--AACTT-CTAGATATTA----GT--TT-----------TGTCCAATGAGAA--------------------------TTATTTTTTAGACAATTTCCATTTCCAAAA--AGTGCAAATAAACGA-ATGTGT--GTGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTTGTTTAAAACTGA---------------------------AACCTAA-ACCCAAAC-----------TAAAACGATTGTAAATTTGGCGCATTCAAAAAAA----------------GACTTTT--------------TAAAGCGTGATTCAAAACATTT---------------------------------------------------TG-------------------AAAGTAATTTAA-------------AGCAGATCA---TTTGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....GAGGC--------------AAAG-------------------------TGGGGAGCAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATTT---------------------------------------------------TG-------------------AAAGTAATTTAA-------------AGC..............2511.00101000000000
.....................................................................................................................................................................................................................................AAATAAACGA-ATGTGT--GTGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.............................................................................................................................GATATTA----GT--TT-----------TGTCCAATGAGAA--------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTTAA-------------AGCAGATCA---TT...2011.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------TAAAACGATTGTAAATTTGGCGCATT.....................................................................................................................................................................................2811.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA----------------GACTTTT--------------TAAAGCGT................................................................................................................................1911.00101000000000
.................................................................GGCTA--GCAG-------------------------------ACTTGAC--AACTT-CTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.........................................................................................................................................................................................................................................AAACGA-ATGTGT--GTGCAGGAGAATGC..............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................AAAG-------------------------TGGGGAGCAGACGGCTA--GCAG-------------------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
........................................................................................................................................................................................................................................................GTGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACT..................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTTT--------------TAAAGCGTGATTCAAAACATT...................................................................................................................2811.00101000000000
...........................................................................G-------------------------------ACTTGAC--AACTT-CTAGATATTA----GT--TT-----------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGATTCAAAACATTT---------------------------------------------------TG-------------------AAA.......................................2311.00100100000000
.......................................................................................................................................................................................................................................ATAAACGA-ATGTGT--GTGCAGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.................................................................................................................................................................................................................................GTGCAAATAAACGA-ATGTGT--............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACGATTGTAAATTTGGCGCATT.....................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGTGATTCAAAACATTT---------------------------------------------------TG-------------------AAAGT.....................................2711.00101000000000
.....................................................................................................................................................................................................................................................T--GTGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTTGTT..............................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTTAA-------------AGCAGATCA---TTTGT2311.00100000010000
.......................................................................................................................................................................................................................................ATAAACGA-ATGTGT--GTGCAGGA....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................AAATAAACGA-ATGTGT--GTGCAGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................................................................................................................................................................................................................................................GTGCAGGAGAATGCAG-------------------------------------------------------------------------------------------------------ACTTGT...............................................................................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAATTTAA-------------AGCAGATCA---TTTGT2411.00100000010000
.............................................................................................................................................................................................................................................GA-ATGTGT--GTGCAGGAGAATGC..............................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................A--------------------------TTATTTTTTAGACAATTTCCATTTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................................................AGATATTA----GT--TT-----------TGTCCAATGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
................................................................................................................................................................................................................................................ATGTGT--GTGCAGGAGAAT................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000010000
.......GGC--------------AAAG-------------------------TGGGGAGCAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
..............................................................................................................................ATATTA----GT--TT-----------TGTCCAATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEug1
AAGAGA---CAG--------------AG-----------------------TG--------GGATGGCAG--GTAG-------------------------------ACTTGAC--A---T-CTAGCTAA-A----AT--TATGATTTCGATATTTTTAACGTAA-C-------------------------TTCT---TCAGG--------------------------------------------TTGCTTTCAAAATCAG--ACTTATTTT-----TG---------------------------AATTGTAAAAAAAAATCAACAAAAAATTGTAAACTTTAAAAATGCTAA----------ACAACCAGAAAACTAA-----------TAATTTTTGTAATTAATATTT--------ACCAAAAACTGCAATACATTAATTATAATTTCATTTTGGCTTAAAA------------------TCC------------------TGTGGCAATCTTTGCAATATTT---------------------------------------------------TC-------------------ATTATAATTT--------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAGGGGCGAC--------------AGAG-----------------------TG--------GGACGGCAC--ACGT-----------------------------AGACTTGAC--AATAT-CTAGTTGC-A----GT--TT-----------TGTCCAACCACAGA-------------------------TTAT---TCAGACACTTT-------CAAGG--CCTACAACTAGGCAA-----------GCAGAATATAGCACACACATATTTG-----CA---------------------------AATTGTACAA----------------------------------------------------------------------------------------------------------------------------------------------------AAAA----------------GATT--------------------------------------------------------------------TGATT----------------------------------------TTTGATTTTA-------------GCCCTTAGC---TTTAASizeHit CountTotal NormTotal
No Reads
droTak1
GAGAGAAGCT--------------G-AG-------------------------AGG-----AGACAGAGA--GGGA-------------------------------------------------GTTCA-A----GT--TT-----------TGTCCAAA---------------------------------AT---TTAGACATTTT-------CCAAA-CAGTTTAAGCAAACTA-TTGTGA--CTGCAGGCGAGGGCAG--ACCCATTTA-----AA---------------------------AATTGTAAA-------------TCTATACATC----------------------------------------------TATACCACATTTAATT-------------------------------------------------------------------------------------------------------------------------------TTAACTTAGACTTTTTAACAAATGAAAAATGATT-TT--------------TC-------------------GAGGTGATTTTA-------------AACAGAGAT---TTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
GAGAGA---GAGAGAGGAGATGGTAAAG-----------------------TG--------AGATGACAG--GCAG-----------------------------AGACTTGACGAAACAT-CTAGTTAA-A----GT--TG-----------TGTTCAATAAGAG--------------------------CTAT---TTAGACTTTTT-------CAAAA-CACTTTAAATCAACTA-TTGTGT--CTGG---TGATTG-------------------------------------------------------------------------------------------------------------------GATGTGCTTCCCATTTCAAACCATGTC------------AAAACACTACA-----------TTTATAGA-AGCAAATTTGGAA-ATGTAAATAAT----------------GAATAAC--------------GAAAGCG---------------------------------------------------AAAGTTCTGTTCATTCAAGATTGATAGATTGAAGCTATAGAGTATCAA-------------TCCAATCCGCTGTTTCCSizeHit CountTotal NormTotal
No Reads
droRho1
GAGGAG--AT--------------AATG-----------------------TG--------AGACGGCAG--GCAG-------------------------------ACTTGAC--AACAA-CTAGTTAC-AGACAGT--TG-----------TGTTCAATAAGAG--------------------------CTTT---TAATACATTTT-------CAAAAACAGTGCAATTAAACTG-ATGTGT--CTGCAAGCGATAGCAG-------------------------------------------------------------------------------------------------------ATTTATTTAGAAATGTTTCC--TTTTAAACTATGTC------------AAAGA-----------------------------------------------AATTATTATAAAAAAGAATT-------------------------------------------TGGAATTGTAAATA-------AT------GTAAGCGAAAGCT--GAAT---AA-------------------TAAGATAATTAA-------------CTCATTTCA---CTTTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAGGAAATC--------------G-AGAGAGATAACGAGATG--------TG--------AGACGGCAG--GCAG-------------------------------GAT------------------------------TA-----------TGTCCAGAACAAAAACAAATTAAAAACAAAACGAAATGTGTAT---TTAGACATTTT-------CAAAA-CTGTTCAAATAAACTA-TTGTGT--CAGCAAGTTAAAACATATATATATATATTTAACAAGTTTTTAAACAAATTTATTGATTTATACTCTTCGA-------------ACAATTGTGA---------CTGCAAGAAAAAAGGAGAGA---TT------------TAGTTAGCATTTTTTT--------------------TAA-----------TAAATTGATTGTAATATTTAGAAATCCAC--AAA----------------GACTTTT--------------TCAAATCTTTT--------------------------------------------------------------TC-----------------------------AAAGCAAACATTTAAAACGGAGAA---TTTTGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTATA---TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT---TTATAAAATTT-------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGAAAATAAAAAATATAAAAATTAACT-------------------------------------------TTAAATTGTATTTG-------CT------T---------------------CG-------------------ATTTAAATTTAA-------------GAAAATGTA---TTCGASizeHit CountTotal NormTotal
No Reads
droAna3
TTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTT---------------------------------------------------TT-------------------TTAAAATTTTAA-------------CGAAATTTT---TTTATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AAAGAAACCA--------------G-AAACA--CAAGAAAGTGTAAGAGAAGG--------AGACAGCGTAAGCGAGAAAGGGAGAGGTGGCAACTAAATTTTAAAAAATTAGCAAAATAT-TCATTCAT-A----AT--TA-----------TAC-AT---------------------------------ATAT---TTGGACTTTTT-------TATAC--TTTATATCCAGCCTA-TTTTAA-----------------------------------------------------------------TTTTAAC-------------TCAATTGTAC----------------------------------------------AATTTCACATTTTATT--------------------TAG-----------TCAATTAATTTTT-------TT----TAAACAAT----------------AAATATA--------------TTAAATT---------------------------------------------------TATGTTATACTTTTTTT------------------------AAATTAA--------------AAAATTCA---ATTATSizeHit CountTotal NormTotal
No Reads
dp5
GAAAAC---GAA--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACCAAAACTAA---------------------------AACATAAAACTT---------------------------------------------------------------------TTGTACATTTTTAGGCATAAAACAAAA-------------------------------------------------------------------------------------------TTTAA-------------AGCATACAC---TTAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GAAAAC---GAA--------------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAAACCAAAACTAA---------------------------AACATAAAACTT---------------------------------------------------------------------TTGTACATTTTTAGGCATAAAACAAAA-------------------------------------------------------------------------------------------TTTAA-------------AGCATACAC---TTAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droVir3
CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----------------AATTTTA--------------GAAAATGTGATTTAAAAACTGT---------------------------------------------------TC-------------------TTA---------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AGGTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGAAAAATTGACAAAGCCTAAAAAA----------------GATTTTT--------------TAAATTATTACTAAAAAA--TT---------------------------------------------------TG-------------------TTAGTA----------------------AAAACA---ATTTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GAGAGA---GAG--------------AG-----------------------AG--------AGACAGCGA--GTGA-------------------------------GTAAGAT--AGCG-----AGTAC-A----ATCTTA-----------TGC------CAA-C-------------------------TTTG---TCTAA--------------------------------------------TCGAAATCGAAAACAA--ACCGCTTTA-----CA---------------------------AGTCGCAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:35 PM